Putative gypsy type transposon
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 799 |
| AccB1I | GGYRCC | 1 cut(s) | 572 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 390, 825 |
| AccBSI | CCGCTC | 2 cut(s) | 1121, 1927 |
| AccI | GTMKAC | 1 cut(s) | 1826 |
| AccII | CGCG | 5 cut(s) | 293, 1161, 1304, 1588, 1608 |
| AccIII | TCCGGA | 2 cut(s) | 269, 1622 |
| AclWI | GGATC | 2 cut(s) | 280, 1248 |
| AcoI | YGGCCR | 2 cut(s) | 234, 1830 |
| AcsI | RAATTY | 1 cut(s) | 304 |
| AcuI | CTGAAG | 6 cut(s) | 297, 647, 755, 1580, 1691, 1834 |
| AcyI | GRCGYC | 1 cut(s) | 1296 |
| AfaI | GTAC | 7 cut(s) | 67, 897, 1055, 1133, 1352, 1729, 1821 |
| AflIII | ACRYGT | 1 cut(s) | 822 |
| AgsI | TTSAA | 3 cut(s) | 94, 1005, 1265 |
| AjiI | CACGTC | 3 cut(s) | 154, 419, 1711 |
| AjnI | CCWGG | 5 cut(s) | 930, 1737, 1806, 1896, 1977 |
| AluBI | AGCT | 9 cut(s) | 497, 661, 913, 982, 1111, 1399, 1789, 1854, 1933 |
| AluI | AGCT | 9 cut(s) | 497, 661, 913, 982, 1111, 1399, 1789, 1854, 1933 |
| Alw21I | GWGCWC | 2 cut(s) | 415, 1935 |
| Alw26I | GTCTC | 2 cut(s) | 39, 1217 |
| Alw44I | GTGCAC | 1 cut(s) | 411 |
| AlwI | GGATC | 2 cut(s) | 280, 1248 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1918 |
| Ama87I | CYCGRG | 1 cut(s) | 1694 |
| Aor13HI | TCCGGA | 2 cut(s) | 269, 1622 |
| ApaI | GGGCCC | 1 cut(s) | 1660 |
| ApaLI | GTGCAC | 1 cut(s) | 411 |
| ApeKI | GCWGC | 8 cut(s) | 446, 452, 494, 661, 835, 1432, 1471, 1882 |
| ApoI | RAATTY | 1 cut(s) | 304 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1543, 1575, 1594, 1626 |
| AspLEI | GCGC | 8 cut(s) | 293, 844, 930, 976, 1372, 1405, 1512, 1594 |
| AsuC2I | CCSGG | 1 cut(s) | 648 |
| AsuHPI | GGTGA | 3 cut(s) | 667, 1475, 1790 |
| AsuII | TTCGAA | 1 cut(s) | 15 |
| AsuNHI | GCTAGC | 1 cut(s) | 497 |
| AvaI | CYCGRG | 1 cut(s) | 1694 |
| AvaII | GGWCC | 6 cut(s) | 878, 1023, 1065, 1315, 1387, 1491 |
| BaeGI | GKGCMC | 4 cut(s) | 415, 765, 1660, 1869 |
| BanI | GGYRCC | 1 cut(s) | 572 |
| BanII | GRGCYC | 3 cut(s) | 1412, 1660, 1935 |
| BauI | CACGAG | 3 cut(s) | 1143, 1254, 1886 |
| BbsI | GAAGAC | 2 cut(s) | 24, 1382 |
| Bbv12I | GWGCWC | 2 cut(s) | 415, 1935 |
| BbvI | GCAGC | 8 cut(s) | 433, 439, 506, 648, 822, 1419, 1458, 1869 |
| BccI | CCATC | 5 cut(s) | 56, 179, 226, 1769, 1841 |
| BceAI | ACGGC | 7 cut(s) | 586, 599, 701, 1244, 1275, 1556, 1845 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1685, 1719 |
| BciT130I | CCWGG | 5 cut(s) | 932, 1739, 1808, 1898, 1979 |
| BciVI | GTATCC | 2 cut(s) | 89, 535 |
| BcnI | CCSGG | 1 cut(s) | 648 |
| BcoDI | GTCTC | 2 cut(s) | 39, 1217 |
| BfaI | CTAG | 5 cut(s) | 362, 422, 432, 498, 758 |
| BfmI | CTRYAG | 3 cut(s) | 377, 1530, 1955 |
| BfoI | RGCGCY | 5 cut(s) | 845, 931, 977, 1406, 1595 |
| BfuAI | ACCTGC | 1 cut(s) | 799 |
| BfuI | GTATCC | 2 cut(s) | 89, 535 |
| BglII | AGATCT | 1 cut(s) | 774 |
| BlpI | GCTNAGC | 1 cut(s) | 1406 |
| Bme1390I | CCNGG | 6 cut(s) | 648, 932, 1739, 1808, 1898, 1979 |
| Bme18I | GGWCC | 6 cut(s) | 878, 1023, 1065, 1315, 1387, 1491 |
| BmeT110I | CYCGRG | 1 cut(s) | 1694 |
| BmgBI | CACGTC | 3 cut(s) | 154, 419, 1711 |
| BmrFI | CCNGG | 6 cut(s) | 648, 932, 1739, 1808, 1898, 1979 |
| BmrI | ACTGGG | 1 cut(s) | 1662 |
| BmsI | GCATC | 2 cut(s) | 1179, 1675 |
| BmtI | GCTAGC | 1 cut(s) | 501 |
| BmuI | ACTGGG | 1 cut(s) | 1662 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1209 |
| BpiI | GAAGAC | 2 cut(s) | 24, 1382 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 674, 706 |
| BpmI | CTGGAG | 2 cut(s) | 1599, 1829 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1934 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1406 |
| Bpu14I | TTCGAA | 1 cut(s) | 15 |
| BpuEI | CTTGAG | 1 cut(s) | 1015 |
| BpuMI | CCSGG | 1 cut(s) | 648 |
| BsaBI | GATNNNNATC | 1 cut(s) | 77 |
| BsaHI | GRCGYC | 1 cut(s) | 1296 |
| BsaJI | CCNNGG | 8 cut(s) | 389, 885, 931, 967, 1311, 1425, 1695, 1977 |
| BsaWI | WCCGGW | 4 cut(s) | 269, 866, 1358, 1622 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1070, 1100, 1334, 1364 |
| Bse118I | RCCGGY | 1 cut(s) | 1493 |
| Bse1I | ACTGG | 2 cut(s) | 1202, 1657 |
| Bse3DI | GCAATG | 1 cut(s) | 795 |
| Bse8I | GATNNNNATC | 1 cut(s) | 77 |
| BseAI | TCCGGA | 2 cut(s) | 269, 1622 |
| BseBI | CCWGG | 5 cut(s) | 932, 1739, 1808, 1898, 1979 |
| BseDI | CCNNGG | 8 cut(s) | 389, 885, 931, 967, 1311, 1425, 1695, 1977 |
| BseGI | GGATG | 4 cut(s) | 67, 190, 237, 606 |
| BseJI | GATNNNNATC | 1 cut(s) | 77 |
| BseMI | GCAATG | 1 cut(s) | 795 |
| BseMII | CTCAG | 6 cut(s) | 537, 970, 1314, 1397, 1752, 1948 |
| BseNI | ACTGG | 2 cut(s) | 1202, 1657 |
| BseRI | GAGGAG | 3 cut(s) | 695, 1649, 1955 |
| BseSI | GKGCMC | 4 cut(s) | 415, 765, 1660, 1869 |
| BseXI | GCAGC | 8 cut(s) | 433, 439, 506, 648, 822, 1419, 1458, 1869 |
| BseYI | CCCAGC | 3 cut(s) | 509, 1487, 1513 |
| BsgI | GTGCAG | 3 cut(s) | 357, 513, 1868 |
| Bsh1236I | CGCG | 5 cut(s) | 293, 1161, 1304, 1588, 1608 |
| Bsh1285I | CGRYCG | 2 cut(s) | 885, 1826 |
| BshNI | GGYRCC | 1 cut(s) | 572 |
| BsiEI | CGRYCG | 2 cut(s) | 885, 1826 |
| BsiHKAI | GWGCWC | 2 cut(s) | 415, 1935 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1694 |
| BsiSI | CCGG | 7 cut(s) | 9, 270, 648, 867, 1359, 1494, 1623 |
| BslFI | GGGAC | 3 cut(s) | 407, 1036, 1504 |
| BsmAI | GTCTC | 2 cut(s) | 39, 1217 |
| BsmBI | CGTCTC | 1 cut(s) | 1217 |
| BsmFI | GGGAC | 3 cut(s) | 407, 1036, 1504 |
| BsmI | GAATGC | 1 cut(s) | 1723 |
| BsoBI | CYCGRG | 1 cut(s) | 1694 |
| Bsp119I | TTCGAA | 1 cut(s) | 15 |
| Bsp120I | GGGCCC | 1 cut(s) | 1656 |
| Bsp1286I | GDGCHC | 6 cut(s) | 415, 765, 1412, 1660, 1869, 1935 |
| Bsp13I | TCCGGA | 2 cut(s) | 269, 1622 |
| Bsp143I | GATC | 6 cut(s) | 72, 272, 693, 774, 984, 1240 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1406 |
| Bsp19I | CCATGG | 1 cut(s) | 1311 |
| Bsp68I | TCGCGA | 1 cut(s) | 1304 |
| BspCNI | CTCAG | 6 cut(s) | 538, 969, 1315, 1398, 1753, 1947 |
| BspEI | TCCGGA | 2 cut(s) | 269, 1622 |
| BspFNI | CGCG | 5 cut(s) | 293, 1161, 1304, 1588, 1608 |
| BspMAI | CTGCAG | 1 cut(s) | 1959 |
| BspMI | ACCTGC | 1 cut(s) | 799 |
| BspOI | GCTAGC | 1 cut(s) | 501 |
| BspPI | GGATC | 2 cut(s) | 280, 1248 |
| BspT104I | TTCGAA | 1 cut(s) | 15 |
| BspT107I | GGYRCC | 1 cut(s) | 572 |
| BsrBI | CCGCTC | 2 cut(s) | 1121, 1927 |
| BsrDI | GCAATG | 1 cut(s) | 795 |
| BsrFI | RCCGGY | 1 cut(s) | 1493 |
| BsrI | ACTGG | 2 cut(s) | 1202, 1657 |
| BssAI | RCCGGY | 1 cut(s) | 1493 |
| BssECI | CCNNGG | 8 cut(s) | 389, 885, 931, 967, 1311, 1425, 1695, 1977 |
| BssMI | GATC | 6 cut(s) | 72, 272, 693, 774, 984, 1240 |
| BssNI | GRCGYC | 1 cut(s) | 1296 |
| BssSI | CACGAG | 3 cut(s) | 1143, 1254, 1886 |
| BssT1I | CCWWGG | 2 cut(s) | 967, 1311 |
| Bst2BI | CACGAG | 3 cut(s) | 1143, 1254, 1886 |
| Bst2UI | CCWGG | 5 cut(s) | 932, 1739, 1808, 1898, 1979 |
| Bst4CI | ACNGT | 5 cut(s) | 390, 676, 886, 1381, 1824 |
| Bst6I | CTCTTC | 3 cut(s) | 465, 1146, 1626 |
| BstACI | GRCGYC | 1 cut(s) | 1296 |
| BstBI | TTCGAA | 1 cut(s) | 15 |
| BstDEI | CTNAG | 8 cut(s) | 478, 546, 956, 1323, 1406, 1416, 1761, 1934 |
| BstDSI | CCRYGG | 4 cut(s) | 389, 885, 1311, 1425 |
| BstF5I | GGATG | 4 cut(s) | 67, 190, 237, 606 |
| BstFNI | CGCG | 5 cut(s) | 293, 1161, 1304, 1588, 1608 |
| BstH2I | RGCGCY | 5 cut(s) | 845, 931, 977, 1406, 1595 |
| BstHHI | GCGC | 8 cut(s) | 293, 844, 930, 976, 1372, 1405, 1512, 1594 |
| BstKTI | GATC | 6 cut(s) | 75, 275, 696, 777, 987, 1243 |
| BstMAI | GTCTC | 2 cut(s) | 39, 1217 |
| BstMBI | GATC | 6 cut(s) | 72, 272, 693, 774, 984, 1240 |
| BstMCI | CGRYCG | 2 cut(s) | 885, 1826 |
| BstNI | CCWGG | 5 cut(s) | 932, 1739, 1808, 1898, 1979 |
| BstNSI | RCATGY | 1 cut(s) | 826 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1209 |
| BstSCI | CCNGG | 6 cut(s) | 646, 930, 1737, 1806, 1896, 1977 |
| BstSFI | CTRYAG | 3 cut(s) | 377, 1530, 1955 |
| BstSLI | GKGCMC | 4 cut(s) | 415, 765, 1660, 1869 |
| BstUI | CGCG | 5 cut(s) | 293, 1161, 1304, 1588, 1608 |
| BstV1I | GCAGC | 8 cut(s) | 433, 439, 506, 648, 822, 1419, 1458, 1869 |
| BstV2I | GAAGAC | 2 cut(s) | 24, 1382 |
| BstX2I | RGATCY | 2 cut(s) | 272, 774 |
| BstYI | RGATCY | 2 cut(s) | 272, 774 |
| BsuI | GTATCC | 2 cut(s) | 89, 535 |
| BtgI | CCRYGG | 4 cut(s) | 389, 885, 1311, 1425 |
| BtrI | CACGTC | 3 cut(s) | 154, 419, 1711 |
| BtsCI | GGATG | 4 cut(s) | 67, 190, 237, 606 |
| BtsI | GCAGTG | 3 cut(s) | 265, 347, 1512 |
| BtsIMutI | CAGTG | 4 cut(s) | 265, 347, 1386, 1512 |
| BtuMI | TCGCGA | 1 cut(s) | 1304 |
| BveI | ACCTGC | 1 cut(s) | 799 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1918 |
| CfoI | GCGC | 8 cut(s) | 293, 844, 930, 976, 1372, 1405, 1512, 1594 |
| Cfr10I | RCCGGY | 1 cut(s) | 1493 |
| CseI | GACGC | 3 cut(s) | 311, 653, 1304 |
| Csp6I | GTAC | 7 cut(s) | 66, 896, 1054, 1132, 1351, 1728, 1820 |
| CviAII | CATG | 7 cut(s) | 104, 722, 823, 1058, 1312, 1319, 1348 |
| CviQI | GTAC | 7 cut(s) | 66, 896, 1054, 1132, 1351, 1728, 1820 |
| DdeI | CTNAG | 8 cut(s) | 478, 546, 956, 1323, 1406, 1416, 1761, 1934 |
| DpnI | GATC | 6 cut(s) | 74, 274, 695, 776, 986, 1242 |
| DpnII | GATC | 6 cut(s) | 72, 272, 693, 774, 984, 1240 |
| EaeI | YGGCCR | 2 cut(s) | 234, 1830 |
| Eam1104I | CTCTTC | 3 cut(s) | 465, 1146, 1626 |
| EarI | CTCTTC | 3 cut(s) | 465, 1146, 1626 |
| EciI | GGCGGA | 3 cut(s) | 311, 905, 1201 |
| Ecl136II | GAGCTC | 1 cut(s) | 1933 |
| Eco130I | CCWWGG | 2 cut(s) | 967, 1311 |
| Eco147I | AGGCCT | 2 cut(s) | 689, 1567 |
| Eco24I | GRGCYC | 3 cut(s) | 1412, 1660, 1935 |
| Eco47I | GGWCC | 6 cut(s) | 878, 1023, 1065, 1315, 1387, 1491 |
| Eco53kI | GAGCTC | 1 cut(s) | 1933 |
| Eco57I | CTGAAG | 6 cut(s) | 297, 647, 755, 1580, 1691, 1834 |
| Eco88I | CYCGRG | 1 cut(s) | 1694 |
| EcoICRI | GAGCTC | 1 cut(s) | 1933 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1023, 1656 |
| EcoRII | CCWGG | 5 cut(s) | 930, 1737, 1806, 1896, 1977 |
| EcoT14I | CCWWGG | 2 cut(s) | 967, 1311 |
| EcoT38I | GRGCYC | 3 cut(s) | 1412, 1660, 1935 |
| ErhI | CCWWGG | 2 cut(s) | 967, 1311 |
| Esp3I | CGTCTC | 1 cut(s) | 1217 |
| FaeI | CATG | 7 cut(s) | 107, 725, 826, 1061, 1315, 1322, 1351 |
| FaqI | GGGAC | 3 cut(s) | 407, 1036, 1504 |
| FatI | CATG | 7 cut(s) | 103, 721, 822, 1057, 1311, 1318, 1347 |
| FblI | GTMKAC | 1 cut(s) | 1826 |
| FokI | GGATG | 4 cut(s) | 74, 197, 244, 613 |
| FriOI | GRGCYC | 3 cut(s) | 1412, 1660, 1935 |
| FspBI | CTAG | 5 cut(s) | 362, 422, 432, 498, 758 |
| GlaI | GCGC | 8 cut(s) | 292, 843, 929, 975, 1371, 1404, 1511, 1593 |
| GsaI | CCCAGC | 3 cut(s) | 513, 1491, 1517 |
| GsuI | CTGGAG | 2 cut(s) | 1599, 1829 |
| HaeII | RGCGCY | 5 cut(s) | 845, 931, 977, 1406, 1595 |
| HapII | CCGG | 7 cut(s) | 9, 270, 648, 867, 1359, 1494, 1623 |
| HgaI | GACGC | 3 cut(s) | 311, 653, 1304 |
| HhaI | GCGC | 8 cut(s) | 293, 844, 930, 976, 1372, 1405, 1512, 1594 |
| Hin1I | GRCGYC | 1 cut(s) | 1296 |
| Hin1II | CATG | 7 cut(s) | 107, 725, 826, 1061, 1315, 1322, 1351 |
| Hin6I | GCGC | 8 cut(s) | 291, 842, 928, 974, 1370, 1403, 1510, 1592 |
| HinP1I | GCGC | 8 cut(s) | 291, 842, 928, 974, 1370, 1403, 1510, 1592 |
| HincII | GTYRAC | 5 cut(s) | 151, 619, 952, 1613, 1827 |
| HindII | GTYRAC | 5 cut(s) | 151, 619, 952, 1613, 1827 |
| HpaII | CCGG | 7 cut(s) | 9, 270, 648, 867, 1359, 1494, 1623 |
| HphI | GGTGA | 3 cut(s) | 667, 1475, 1790 |
| Hpy166II | GTNNAC | 8 cut(s) | 151, 413, 619, 952, 1387, 1613, 1781, 1827 |
| Hpy188I | TCNGA | 6 cut(s) | 72, 277, 774, 1118, 1175, 1671 |
| Hpy188III | TCNNGA | 7 cut(s) | 270, 422, 988, 1145, 1303, 1623, 1768 |
| Hpy8I | GTNNAC | 8 cut(s) | 151, 413, 619, 952, 1387, 1613, 1781, 1827 |
| Hpy99I | CGWCG | 7 cut(s) | 966, 1045, 1087, 1276, 1555, 1831, 1880 |
| HpyAV | CCTTC | 8 cut(s) | 679, 760, 779, 1036, 1067, 1309, 1669, 1858 |
| HpyCH4III | ACNGT | 5 cut(s) | 390, 676, 886, 1381, 1824 |
| HpyCH4IV | ACGT | 4 cut(s) | 153, 418, 1085, 1710 |
| HpyCH4V | TGCA | 7 cut(s) | 338, 413, 466, 494, 721, 1885, 1957 |
| HpyF3I | CTNAG | 8 cut(s) | 478, 546, 956, 1323, 1406, 1416, 1761, 1934 |
| HpySE526I | ACGT | 4 cut(s) | 153, 418, 1085, 1710 |
| Hsp92I | GRCGYC | 1 cut(s) | 1296 |
| Hsp92II | CATG | 7 cut(s) | 107, 725, 826, 1061, 1315, 1322, 1351 |
| HspAI | GCGC | 8 cut(s) | 291, 842, 928, 974, 1370, 1403, 1510, 1592 |
| Kpn2I | TCCGGA | 2 cut(s) | 269, 1622 |
| Kzo9I | GATC | 6 cut(s) | 72, 272, 693, 774, 984, 1240 |
| LmnI | GCTCC | 7 cut(s) | 971, 1078, 1543, 1693, 1705, 1786, 1930 |
| Lsp1109I | GCAGC | 8 cut(s) | 433, 439, 506, 648, 822, 1419, 1458, 1869 |
| LweI | GCATC | 2 cut(s) | 1179, 1675 |
| MaeI | CTAG | 5 cut(s) | 362, 422, 432, 498, 758 |
| MaeII | ACGT | 4 cut(s) | 153, 418, 1085, 1710 |
| MaeIII | GTNAC | 5 cut(s) | 745, 869, 1292, 1463, 1525 |
| MalI | GATC | 6 cut(s) | 74, 274, 695, 776, 986, 1242 |
| MbiI | CCGCTC | 2 cut(s) | 1121, 1927 |
| MboI | GATC | 6 cut(s) | 72, 272, 693, 774, 984, 1240 |
| MboII | GAAGA | 6 cut(s) | 29, 482, 1163, 1387, 1643, 1684 |
| MflI | RGATCY | 2 cut(s) | 272, 774 |
| MhlI | GDGCHC | 6 cut(s) | 415, 765, 1412, 1660, 1869, 1935 |
| MluCI | AATT | 2 cut(s) | 304, 1964 |
| MlyI | GAGTC | 7 cut(s) | 41, 308, 557, 1135, 1246, 1613, 1736 |
| MmeI | TCCRAC | 4 cut(s) | 917, 1080, 1092, 1521 |
| MroI | TCCGGA | 2 cut(s) | 269, 1622 |
| MseI | TTAA | 1 cut(s) | 1095 |
| MslI | CAYNNNNRTG | 2 cut(s) | 401, 1458 |
| MspA1I | CMGCKG | 3 cut(s) | 452, 509, 1517 |
| MspI | CCGG | 7 cut(s) | 9, 270, 648, 867, 1359, 1494, 1623 |
| MspR9I | CCNGG | 6 cut(s) | 648, 932, 1739, 1808, 1898, 1979 |
| Mva1269I | GAATGC | 1 cut(s) | 1723 |
| MvaI | CCWGG | 5 cut(s) | 932, 1739, 1808, 1898, 1979 |
| MvnI | CGCG | 5 cut(s) | 293, 1161, 1304, 1588, 1608 |
| NciI | CCSGG | 1 cut(s) | 648 |
| NcoI | CCATGG | 1 cut(s) | 1311 |
| NdeII | GATC | 6 cut(s) | 72, 272, 693, 774, 984, 1240 |
| NheI | GCTAGC | 1 cut(s) | 497 |
| NlaIII | CATG | 7 cut(s) | 107, 725, 826, 1061, 1315, 1322, 1351 |
| NmeAIII | GCCGAG | 1 cut(s) | 1835 |
| NmuCI | GTSAC | 4 cut(s) | 745, 1292, 1463, 1525 |
| NruI | TCGCGA | 1 cut(s) | 1304 |
| NspI | RCATGY | 1 cut(s) | 826 |
| NspV | TTCGAA | 1 cut(s) | 15 |
| PceI | AGGCCT | 2 cut(s) | 689, 1567 |
| PciI | ACATGT | 1 cut(s) | 822 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 323, 415, 576, 1559, 1884 |
| PctI | GAATGC | 1 cut(s) | 1723 |
| PfeI | GAWTC | 3 cut(s) | 266, 1001, 1189 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 390, 825 |
| PleI | GAGTC | 7 cut(s) | 41, 308, 556, 1135, 1246, 1613, 1736 |
| PpsI | GAGTC | 7 cut(s) | 41, 308, 556, 1135, 1246, 1613, 1736 |
| PpuMI | RGGWCCY | 1 cut(s) | 1023 |
| PscI | ACATGT | 1 cut(s) | 822 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1209 |
| Psp124BI | GAGCTC | 1 cut(s) | 1935 |
| Psp5II | RGGWCCY | 1 cut(s) | 1023 |
| Psp6I | CCWGG | 5 cut(s) | 930, 1737, 1806, 1896, 1977 |
| PspFI | CCCAGC | 3 cut(s) | 509, 1487, 1513 |
| PspGI | CCWGG | 5 cut(s) | 930, 1737, 1806, 1896, 1977 |
| PspOMI | GGGCCC | 1 cut(s) | 1656 |
| PspPPI | RGGWCCY | 1 cut(s) | 1023 |
| PstI | CTGCAG | 1 cut(s) | 1959 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1918 |
| PsuI | RGATCY | 2 cut(s) | 272, 774 |
| RruI | TCGCGA | 1 cut(s) | 1304 |
| RsaI | GTAC | 7 cut(s) | 67, 897, 1055, 1133, 1352, 1729, 1821 |
| RsaNI | GTAC | 7 cut(s) | 66, 896, 1054, 1132, 1351, 1728, 1820 |
| RseI | CAYNNNNRTG | 2 cut(s) | 401, 1458 |
| SacI | GAGCTC | 1 cut(s) | 1935 |
| SalI | GTCGAC | 1 cut(s) | 1825 |
| SaqAI | TTAA | 1 cut(s) | 1095 |
| Sau3AI | GATC | 6 cut(s) | 72, 272, 693, 774, 984, 1240 |
| SchI | GAGTC | 7 cut(s) | 41, 308, 557, 1135, 1246, 1613, 1736 |
| ScrFI | CCNGG | 6 cut(s) | 648, 932, 1739, 1808, 1898, 1979 |
| SduI | GDGCHC | 6 cut(s) | 415, 765, 1412, 1660, 1869, 1935 |
| SfaNI | GCATC | 2 cut(s) | 1179, 1675 |
| SfcI | CTRYAG | 3 cut(s) | 377, 1530, 1955 |
| SfuI | TTCGAA | 1 cut(s) | 15 |
| SinI | GGWCC | 6 cut(s) | 878, 1023, 1065, 1315, 1387, 1491 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 401, 1458 |
| SmlI | CTYRAG | 1 cut(s) | 994 |
| SmoI | CTYRAG | 1 cut(s) | 994 |
| Sse9I | AATT | 2 cut(s) | 304, 1964 |
| SseBI | AGGCCT | 2 cut(s) | 689, 1567 |
| SspMI | CTAG | 5 cut(s) | 362, 422, 432, 498, 758 |
| SstI | GAGCTC | 1 cut(s) | 1935 |
| StuI | AGGCCT | 2 cut(s) | 689, 1567 |
| StyD4I | CCNGG | 6 cut(s) | 646, 930, 1737, 1806, 1896, 1977 |
| StyI | CCWWGG | 2 cut(s) | 967, 1311 |
| TaaI | ACNGT | 5 cut(s) | 390, 676, 886, 1381, 1824 |
| TaiI | ACGT | 4 cut(s) | 156, 421, 1088, 1713 |
| TaqI | TCGA | 7 cut(s) | 15, 254, 564, 692, 987, 1562, 1826 |
| TaqII | GACCGA | 1 cut(s) | 895 |
| TasI | AATT | 2 cut(s) | 304, 1964 |
| TfiI | GAWTC | 3 cut(s) | 266, 1001, 1189 |
| Tru1I | TTAA | 1 cut(s) | 1095 |
| Tru9I | TTAA | 1 cut(s) | 1095 |
| TscAI | CASTG | 4 cut(s) | 265, 354, 1386, 1512 |
| TseFI | GTSAC | 4 cut(s) | 745, 1292, 1463, 1525 |
| TseI | GCWGC | 8 cut(s) | 446, 452, 494, 661, 835, 1432, 1471, 1882 |
| Tsp45I | GTSAC | 4 cut(s) | 745, 1292, 1463, 1525 |
| TspDTI | ATGAA | 2 cut(s) | 17, 78 |
| TspGWI | ACGGA | 4 cut(s) | 315, 1199, 1260, 1864 |
| TspRI | CASTG | 4 cut(s) | 265, 354, 1386, 1512 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 390, 825 |
| VneI | GTGCAC | 1 cut(s) | 411 |
| VpaK11BI | GGWCC | 6 cut(s) | 878, 1023, 1065, 1315, 1387, 1491 |
| XapI | RAATTY | 1 cut(s) | 304 |
| XbaI | TCTAGA | 1 cut(s) | 421 |
| XceI | RCATGY | 1 cut(s) | 826 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1454 |
| XmiI | GTMKAC | 1 cut(s) | 1826 |
| XspI | CTAG | 5 cut(s) | 362, 422, 432, 498, 758 |