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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1480 |
| AccB1I | GGYRCC | 4 cut(s) | 583, 795, 1394, 1487 |
| AccBSI | CCGCTC | 4 cut(s) | 116, 1036, 1165, 1494 |
| AclWI | GGATC | 5 cut(s) | 173, 318, 857, 1527, 1540 |
| AcoI | YGGCCR | 1 cut(s) | 1287 |
| AcuI | CTGAAG | 3 cut(s) | 1290, 1403, 1698 |
| AcyI | GRCGYC | 2 cut(s) | 1071, 1395 |
| AfaI | GTAC | 1 cut(s) | 347 |
| AflIII | ACRYGT | 1 cut(s) | 924 |
| AgeI | ACCGGT | 1 cut(s) | 580 |
| AgsI | TTSAA | 6 cut(s) | 260, 772, 932, 1301, 1309, 1411 |
| AjiI | CACGTC | 1 cut(s) | 1429 |
| AjnI | CCWGG | 5 cut(s) | 333, 554, 605, 732, 1578 |
| Alw21I | GWGCWC | 1 cut(s) | 1450 |
| Alw26I | GTCTC | 5 cut(s) | 332, 383, 590, 992, 1132 |
| AlwI | GGATC | 5 cut(s) | 173, 318, 857, 1527, 1540 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 952 |
| Ama87I | CYCGRG | 4 cut(s) | 386, 1074, 1593, 1632 |
| AoxI | GGCC | 8 cut(s) | 74, 363, 463, 608, 753, 838, 1287, 1359 |
| ApaI | GGGCCC | 1 cut(s) | 1363 |
| ApeKI | GCWGC | 9 cut(s) | 427, 515, 776, 916, 946, 1201, 1234, 1292, 1653 |
| AsiGI | ACCGGT | 1 cut(s) | 580 |
| AspS9I | GGNCC | 8 cut(s) | 18, 74, 364, 736, 754, 1359, 1360, 1638 |
| AsuC2I | CCSGG | 5 cut(s) | 270, 1594, 1595, 1633, 1634 |
| AsuHPI | GGTGA | 4 cut(s) | 391, 467, 595, 911 |
| AsuII | TTCGAA | 1 cut(s) | 297 |
| AvaI | CYCGRG | 4 cut(s) | 386, 1074, 1593, 1632 |
| AvaII | GGWCC | 3 cut(s) | 18, 736, 1638 |
| AxyI | CCTNAGG | 1 cut(s) | 1262 |
| BaeGI | GKGCMC | 2 cut(s) | 1363, 1492 |
| BamHI | GGATCC | 1 cut(s) | 1532 |
| BanI | GGYRCC | 4 cut(s) | 583, 795, 1394, 1487 |
| BanII | GRGCYC | 2 cut(s) | 490, 1363 |
| BauI | CACGAG | 1 cut(s) | 637 |
| BbsI | GAAGAC | 1 cut(s) | 377 |
| Bbv12I | GWGCWC | 1 cut(s) | 1450 |
| BbvI | GCAGC | 9 cut(s) | 414, 527, 763, 903, 958, 1213, 1246, 1279, 1665 |
| BccI | CCATC | 5 cut(s) | 116, 301, 456, 1024, 1406 |
| BceAI | ACGGC | 4 cut(s) | 478, 879, 1280, 1618 |
| BciT130I | CCWGG | 5 cut(s) | 335, 556, 607, 734, 1580 |
| BcnI | CCSGG | 5 cut(s) | 270, 1594, 1595, 1633, 1634 |
| BcoDI | GTCTC | 5 cut(s) | 332, 383, 590, 992, 1132 |
| BfaI | CTAG | 4 cut(s) | 593, 842, 1241, 1364 |
| BfmI | CTRYAG | 1 cut(s) | 883 |
| BfoI | RGCGCY | 4 cut(s) | 401, 668, 682, 1398 |
| BfuAI | ACCTGC | 1 cut(s) | 1480 |
| BlpI | GCTNAGC | 1 cut(s) | 401 |
| Bme18I | GGWCC | 3 cut(s) | 18, 736, 1638 |
| BmeT110I | CYCGRG | 4 cut(s) | 386, 1074, 1593, 1632 |
| BmgBI | CACGTC | 1 cut(s) | 1429 |
| BmgT120I | GGNCC | 8 cut(s) | 18, 74, 364, 736, 754, 1359, 1360, 1638 |
| BmrI | ACTGGG | 1 cut(s) | 1546 |
| BmsI | GCATC | 1 cut(s) | 527 |
| BmuI | ACTGGG | 1 cut(s) | 1546 |
| BpiI | GAAGAC | 1 cut(s) | 377 |
| BpmI | CTGGAG | 4 cut(s) | 356, 689, 974, 1157 |
| Bpu10I | CCTNAGC | 2 cut(s) | 968, 1495 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 401 |
| Bpu14I | TTCGAA | 1 cut(s) | 297 |
| BpuMI | CCSGG | 5 cut(s) | 270, 1594, 1595, 1633, 1634 |
| BsaHI | GRCGYC | 2 cut(s) | 1071, 1395 |
| BsaI | GGTCTC | 2 cut(s) | 332, 590 |
| BsaWI | WCCGGW | 1 cut(s) | 580 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 329, 359, 472, 502, 1112, 1142 |
| Bse118I | RCCGGY | 7 cut(s) | 215, 580, 625, 650, 681, 1435, 1522 |
| Bse1I | ACTGG | 9 cut(s) | 14, 381, 399, 406, 419, 728, 806, 874, 1552 |
| Bse21I | CCTNAGG | 1 cut(s) | 1262 |
| BseBI | CCWGG | 5 cut(s) | 335, 556, 607, 734, 1580 |
| BseGI | GGATG | 3 cut(s) | 108, 262, 724 |
| BseMII | CTCAG | 3 cut(s) | 392, 1253, 1509 |
| BseNI | ACTGG | 9 cut(s) | 14, 381, 399, 406, 419, 728, 806, 874, 1552 |
| BsePI | GCGCGC | 1 cut(s) | 559 |
| BseRI | GAGGAG | 2 cut(s) | 161, 632 |
| BseSI | GKGCMC | 2 cut(s) | 1363, 1492 |
| BseX3I | CGGCCG | 1 cut(s) | 1287 |
| BseXI | GCAGC | 9 cut(s) | 414, 527, 763, 903, 958, 1213, 1246, 1279, 1665 |
| BseYI | CCCAGC | 5 cut(s) | 56, 219, 1355, 1419, 1536 |
| BsgI | GTGCAG | 3 cut(s) | 902, 1220, 1253 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1290, 1523 |
| BshFI | GGCC | 8 cut(s) | 76, 365, 465, 610, 755, 840, 1289, 1361 |
| BshNI | GGYRCC | 4 cut(s) | 583, 795, 1394, 1487 |
| BshTI | ACCGGT | 1 cut(s) | 580 |
| BsiEI | CGRYCG | 2 cut(s) | 1290, 1523 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1450 |
| BsiHKCI | CYCGRG | 4 cut(s) | 386, 1074, 1593, 1632 |
| BslFI | GGGAC | 6 cut(s) | 31, 132, 1118, 1289, 1402, 1608 |
| BsmAI | GTCTC | 5 cut(s) | 332, 383, 590, 992, 1132 |
| BsmBI | CGTCTC | 1 cut(s) | 1132 |
| BsmFI | GGGAC | 6 cut(s) | 31, 132, 1118, 1289, 1402, 1608 |
| BsmI | GAATGC | 1 cut(s) | 1304 |
| BsnI | GGCC | 8 cut(s) | 76, 365, 465, 610, 755, 840, 1289, 1361 |
| Bso31I | GGTCTC | 2 cut(s) | 332, 590 |
| BsoBI | CYCGRG | 4 cut(s) | 386, 1074, 1593, 1632 |
| Bsp119I | TTCGAA | 1 cut(s) | 297 |
| Bsp120I | GGGCCC | 1 cut(s) | 1359 |
| Bsp1286I | GDGCHC | 4 cut(s) | 490, 1363, 1450, 1492 |
| Bsp143I | GATC | 7 cut(s) | 165, 235, 310, 687, 849, 1532, 1642 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 401 |
| Bsp68I | TCGCGA | 1 cut(s) | 288 |
| BspANI | GGCC | 8 cut(s) | 76, 365, 465, 610, 755, 840, 1289, 1361 |
| BspCNI | CTCAG | 3 cut(s) | 393, 1254, 1508 |
| BspMI | ACCTGC | 1 cut(s) | 1480 |
| BspPI | GGATC | 5 cut(s) | 173, 318, 857, 1527, 1540 |
| BspT104I | TTCGAA | 1 cut(s) | 297 |
| BspT107I | GGYRCC | 4 cut(s) | 583, 795, 1394, 1487 |
| BspTNI | GGTCTC | 2 cut(s) | 332, 590 |
| BsrBI | CCGCTC | 4 cut(s) | 116, 1036, 1165, 1494 |
| BsrFI | RCCGGY | 7 cut(s) | 215, 580, 625, 650, 681, 1435, 1522 |
| BsrI | ACTGG | 9 cut(s) | 14, 381, 399, 406, 419, 728, 806, 874, 1552 |
| BssAI | RCCGGY | 7 cut(s) | 215, 580, 625, 650, 681, 1435, 1522 |
| BssHII | GCGCGC | 1 cut(s) | 559 |
| BssMI | GATC | 7 cut(s) | 165, 235, 310, 687, 849, 1532, 1642 |
| BssNI | GRCGYC | 2 cut(s) | 1071, 1395 |
| BssSI | CACGAG | 1 cut(s) | 637 |
| BssT1I | CCWWGG | 2 cut(s) | 611, 1176 |
| Bst2BI | CACGAG | 1 cut(s) | 637 |
| Bst2UI | CCWGG | 5 cut(s) | 335, 556, 607, 734, 1580 |
| Bst4CI | ACNGT | 4 cut(s) | 188, 601, 1090, 1314 |
| Bst6I | CTCTTC | 1 cut(s) | 138 |
| BstACI | GRCGYC | 2 cut(s) | 1071, 1395 |
| BstBI | TTCGAA | 1 cut(s) | 297 |
| BstDEI | CTNAG | 5 cut(s) | 401, 968, 1262, 1440, 1495 |
| BstDSI | CCRYGG | 2 cut(s) | 492, 1284 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1157 |
| BstF5I | GGATG | 3 cut(s) | 108, 262, 724 |
| BstH2I | RGCGCY | 4 cut(s) | 401, 668, 682, 1398 |
| BstKTI | GATC | 7 cut(s) | 168, 238, 313, 690, 852, 1535, 1645 |
| BstMAI | GTCTC | 5 cut(s) | 332, 383, 590, 992, 1132 |
| BstMBI | GATC | 7 cut(s) | 165, 235, 310, 687, 849, 1532, 1642 |
| BstMCI | CGRYCG | 2 cut(s) | 1290, 1523 |
| BstNI | CCWGG | 5 cut(s) | 335, 556, 607, 734, 1580 |
| BstNSI | RCATGY | 3 cut(s) | 928, 1381, 1676 |
| BstSFI | CTRYAG | 1 cut(s) | 883 |
| BstSLI | GKGCMC | 2 cut(s) | 1363, 1492 |
| BstV1I | GCAGC | 9 cut(s) | 414, 527, 763, 903, 958, 1213, 1246, 1279, 1665 |
| BstV2I | GAAGAC | 1 cut(s) | 377 |
| BstX2I | RGATCY | 2 cut(s) | 849, 1532 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 813, 1579 |
| BstYI | RGATCY | 2 cut(s) | 849, 1532 |
| BstZI | CGGCCG | 1 cut(s) | 1287 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1262 |
| BsuRI | GGCC | 8 cut(s) | 76, 365, 465, 610, 755, 840, 1289, 1361 |
| BtgI | CCRYGG | 2 cut(s) | 492, 1284 |
| BtgZI | GCGATG | 2 cut(s) | 320, 1132 |
| BtrI | CACGTC | 1 cut(s) | 1429 |
| BtsCI | GGATG | 3 cut(s) | 108, 262, 724 |
| BtsI | GCAGTG | 1 cut(s) | 1278 |
| BtsIMutI | CAGTG | 5 cut(s) | 374, 392, 426, 813, 1278 |
| BtuMI | TCGCGA | 1 cut(s) | 288 |
| BveI | ACCTGC | 1 cut(s) | 1480 |
| CaiI | CAGNNNCTG | 1 cut(s) | 952 |
| CciNI | GCGGCCGC | 1 cut(s) | 1287 |
| Cfr10I | RCCGGY | 7 cut(s) | 215, 580, 625, 650, 681, 1435, 1522 |
| Cfr13I | GGNCC | 8 cut(s) | 18, 74, 364, 736, 754, 1359, 1360, 1638 |
| Cfr42I | CCGCGG | 1 cut(s) | 1287 |
| Cfr9I | CCCGGG | 2 cut(s) | 1593, 1632 |
| CseI | GACGC | 5 cut(s) | 16, 299, 1079, 1114, 1404 |
| Csp6I | GTAC | 1 cut(s) | 346 |
| CspAI | ACCGGT | 1 cut(s) | 580 |
| CviAII | CATG | 4 cut(s) | 343, 925, 1378, 1673 |
| CviQI | GTAC | 1 cut(s) | 346 |
| DdeI | CTNAG | 5 cut(s) | 401, 968, 1262, 1440, 1495 |
| DinI | GGCGCC | 1 cut(s) | 1396 |
| DpnI | GATC | 7 cut(s) | 167, 237, 312, 689, 851, 1534, 1644 |
| DpnII | GATC | 7 cut(s) | 165, 235, 310, 687, 849, 1532, 1642 |
| EaeI | YGGCCR | 1 cut(s) | 1287 |
| EagI | CGGCCG | 1 cut(s) | 1287 |
| Eam1104I | CTCTTC | 1 cut(s) | 138 |
| EarI | CTCTTC | 1 cut(s) | 138 |
| EciI | GGCGGA | 8 cut(s) | 196, 255, 728, 1019, 1334, 1440, 1541, 1613 |
| EclXI | CGGCCG | 1 cut(s) | 1287 |
| Eco130I | CCWWGG | 2 cut(s) | 611, 1176 |
| Eco24I | GRGCYC | 2 cut(s) | 490, 1363 |
| Eco31I | GGTCTC | 2 cut(s) | 332, 590 |
| Eco47I | GGWCC | 3 cut(s) | 18, 736, 1638 |
| Eco52I | CGGCCG | 1 cut(s) | 1287 |
| Eco57I | CTGAAG | 3 cut(s) | 1290, 1403, 1698 |
| Eco81I | CCTNAGG | 1 cut(s) | 1262 |
| Eco88I | CYCGRG | 4 cut(s) | 386, 1074, 1593, 1632 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1157 |
| EcoO109I | RGGNCCY | 3 cut(s) | 18, 1359, 1360 |
| EcoRII | CCWGG | 5 cut(s) | 333, 554, 605, 732, 1578 |
| EcoT14I | CCWWGG | 2 cut(s) | 611, 1176 |
| EcoT38I | GRGCYC | 2 cut(s) | 490, 1363 |
| EgeI | GGCGCC | 1 cut(s) | 1396 |
| EheI | GGCGCC | 1 cut(s) | 1396 |
| ErhI | CCWWGG | 2 cut(s) | 611, 1176 |
| Esp3I | CGTCTC | 1 cut(s) | 1132 |
| FaeI | CATG | 4 cut(s) | 346, 928, 1381, 1676 |
| FaiI | YATR | 9 cut(s) | 129, 344, 570, 926, 1326, 1373, 1379, 1607, 1674 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 951, 983, 1091, 1123 |
| FaqI | GGGAC | 6 cut(s) | 31, 132, 1118, 1289, 1402, 1608 |
| FatI | CATG | 4 cut(s) | 342, 924, 1377, 1672 |
| FokI | GGATG | 3 cut(s) | 95, 249, 731 |
| FriOI | GRGCYC | 2 cut(s) | 490, 1363 |
| FspBI | CTAG | 4 cut(s) | 593, 842, 1241, 1364 |
| GsaI | CCCAGC | 5 cut(s) | 60, 223, 1359, 1423, 1540 |
| GsuI | CTGGAG | 4 cut(s) | 356, 689, 974, 1157 |
| HaeII | RGCGCY | 4 cut(s) | 401, 668, 682, 1398 |
| HaeIII | GGCC | 8 cut(s) | 76, 365, 465, 610, 755, 840, 1289, 1361 |
| HgaI | GACGC | 5 cut(s) | 16, 299, 1079, 1114, 1404 |
| Hin1I | GRCGYC | 2 cut(s) | 1071, 1395 |
| Hin1II | CATG | 4 cut(s) | 346, 928, 1381, 1676 |
| HinfI | GANTC | 6 cut(s) | 692, 817, 831, 1208, 1343, 1543 |
| HphI | GGTGA | 4 cut(s) | 391, 467, 595, 911 |
| Hpy166II | GTNNAC | 1 cut(s) | 382 |
| Hpy188I | TCNGA | 7 cut(s) | 97, 113, 206, 412, 1338, 1558, 1642 |
| Hpy188III | TCNNGA | 4 cut(s) | 287, 478, 991, 1408 |
| Hpy8I | GTNNAC | 1 cut(s) | 382 |
| Hpy99I | CGWCG | 5 cut(s) | 32, 82, 293, 464, 1430 |
| HpyCH4III | ACNGT | 4 cut(s) | 188, 601, 1090, 1314 |
| HpyCH4IV | ACGT | 2 cut(s) | 80, 1428 |
| HpyCH4V | TGCA | 3 cut(s) | 919, 1201, 1234 |
| HpyF3I | CTNAG | 5 cut(s) | 401, 968, 1262, 1440, 1495 |
| HpySE526I | ACGT | 2 cut(s) | 80, 1428 |
| Hsp92I | GRCGYC | 2 cut(s) | 1071, 1395 |
| Hsp92II | CATG | 4 cut(s) | 346, 928, 1381, 1676 |
| KasI | GGCGCC | 1 cut(s) | 1394 |
| KroI | GCCGGC | 3 cut(s) | 625, 650, 681 |
| KroNI | GCCGGC | 3 cut(s) | 627, 652, 683 |
| KspI | CCGCGG | 1 cut(s) | 1287 |
| Kzo9I | GATC | 7 cut(s) | 165, 235, 310, 687, 849, 1532, 1642 |
| Lsp1109I | GCAGC | 9 cut(s) | 414, 527, 763, 903, 958, 1213, 1246, 1279, 1665 |
| LweI | GCATC | 1 cut(s) | 527 |
| MaeI | CTAG | 4 cut(s) | 593, 842, 1241, 1364 |
| MaeII | ACGT | 2 cut(s) | 80, 1428 |
| MaeIII | GTNAC | 6 cut(s) | 188, 455, 601, 808, 1058, 1155 |
| MalI | GATC | 7 cut(s) | 167, 237, 312, 689, 851, 1534, 1644 |
| MbiI | CCGCTC | 4 cut(s) | 116, 1036, 1165, 1494 |
| MboI | GATC | 7 cut(s) | 165, 235, 310, 687, 849, 1532, 1642 |
| MboII | GAAGA | 6 cut(s) | 155, 382, 760, 952, 1039, 1697 |
| MfeI | CAATTG | 1 cut(s) | 1659 |
| MflI | RGATCY | 2 cut(s) | 849, 1532 |
| MhlI | GDGCHC | 4 cut(s) | 490, 1363, 1450, 1492 |
| MluCI | AATT | 1 cut(s) | 1659 |
| Mly113I | GGCGCC | 1 cut(s) | 1395 |
| MlyI | GAGTC | 5 cut(s) | 686, 811, 1217, 1352, 1537 |
| MmeI | TCCRAC | 4 cut(s) | 75, 127, 229, 1536 |
| MreI | CGCCGGCG | 1 cut(s) | 625 |
| MroNI | GCCGGC | 3 cut(s) | 625, 650, 681 |
| MseI | TTAA | 2 cut(s) | 90, 1098 |
| MslI | CAYNNNNRTG | 3 cut(s) | 453, 1196, 1376 |
| MspA1I | CMGCKG | 5 cut(s) | 241, 524, 1237, 1286, 1292 |
| MunI | CAATTG | 1 cut(s) | 1659 |
| Mva1269I | GAATGC | 1 cut(s) | 1304 |
| MvaI | CCWGG | 5 cut(s) | 335, 556, 607, 734, 1580 |
| NaeI | GCCGGC | 3 cut(s) | 627, 652, 683 |
| NarI | GGCGCC | 1 cut(s) | 1395 |
| NciI | CCSGG | 5 cut(s) | 270, 1594, 1595, 1633, 1634 |
| NdeII | GATC | 7 cut(s) | 165, 235, 310, 687, 849, 1532, 1642 |
| NgoMIV | GCCGGC | 3 cut(s) | 625, 650, 681 |
| NlaIII | CATG | 4 cut(s) | 346, 928, 1381, 1676 |
| NmeAIII | GCCGAG | 3 cut(s) | 376, 852, 869 |
| NmuCI | GTSAC | 4 cut(s) | 455, 601, 808, 1058 |
| NotI | GCGGCCGC | 1 cut(s) | 1287 |
| NruI | TCGCGA | 1 cut(s) | 288 |
| NspI | RCATGY | 3 cut(s) | 928, 1381, 1676 |
| NspV | TTCGAA | 1 cut(s) | 297 |
| PaeI | GCATGC | 1 cut(s) | 1676 |
| PauI | GCGCGC | 1 cut(s) | 559 |
| PciI | ACATGT | 1 cut(s) | 924 |
| PctI | GAATGC | 1 cut(s) | 1304 |
| PdiI | GCCGGC | 3 cut(s) | 627, 652, 683 |
| PfeI | GAWTC | 1 cut(s) | 831 |
| PflFI | GACNNNGTC | 1 cut(s) | 1342 |
| PfoI | TCCNGGA | 1 cut(s) | 333 |
| PinAI | ACCGGT | 1 cut(s) | 580 |
| PleI | GAGTC | 5 cut(s) | 686, 811, 1216, 1351, 1537 |
| PluTI | GGCGCC | 1 cut(s) | 1398 |
| PpsI | GAGTC | 5 cut(s) | 686, 811, 1216, 1351, 1537 |
| PpuMI | RGGWCCY | 1 cut(s) | 18 |
| PscI | ACATGT | 1 cut(s) | 924 |
| Psp5II | RGGWCCY | 1 cut(s) | 18 |
| Psp6I | CCWGG | 5 cut(s) | 333, 554, 605, 732, 1578 |
| PspFI | CCCAGC | 5 cut(s) | 56, 219, 1355, 1419, 1536 |
| PspGI | CCWGG | 5 cut(s) | 333, 554, 605, 732, 1578 |
| PspOMI | GGGCCC | 1 cut(s) | 1359 |
| PspPI | GGNCC | 8 cut(s) | 18, 74, 364, 736, 754, 1359, 1360, 1638 |
| PspPPI | RGGWCCY | 1 cut(s) | 18 |
| PstNI | CAGNNNCTG | 1 cut(s) | 952 |
| PsuI | RGATCY | 2 cut(s) | 849, 1532 |
| PsyI | GACNNNGTC | 1 cut(s) | 1342 |
| PteI | GCGCGC | 1 cut(s) | 559 |
| RruI | TCGCGA | 1 cut(s) | 288 |
| RsaI | GTAC | 1 cut(s) | 347 |
| RsaNI | GTAC | 1 cut(s) | 346 |
| RseI | CAYNNNNRTG | 3 cut(s) | 453, 1196, 1376 |
| SacII | CCGCGG | 1 cut(s) | 1287 |
| SaqAI | TTAA | 2 cut(s) | 90, 1098 |
| Sau3AI | GATC | 7 cut(s) | 165, 235, 310, 687, 849, 1532, 1642 |
| Sau96I | GGNCC | 8 cut(s) | 18, 74, 364, 736, 754, 1359, 1360, 1638 |
| SchI | GAGTC | 5 cut(s) | 686, 811, 1217, 1352, 1537 |
| SduI | GDGCHC | 4 cut(s) | 490, 1363, 1450, 1492 |
| SfaNI | GCATC | 1 cut(s) | 527 |
| SfcI | CTRYAG | 1 cut(s) | 883 |
| SfoI | GGCGCC | 1 cut(s) | 1396 |
| Sfr303I | CCGCGG | 1 cut(s) | 1287 |
| SfuI | TTCGAA | 1 cut(s) | 297 |
| SgrAI | CRCCGGYG | 1 cut(s) | 625 |
| SgrBI | CCGCGG | 1 cut(s) | 1287 |
| SinI | GGWCC | 3 cut(s) | 18, 736, 1638 |
| SmaI | CCCGGG | 2 cut(s) | 1595, 1634 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 453, 1196, 1376 |
| SphI | GCATGC | 1 cut(s) | 1676 |
| Sse9I | AATT | 1 cut(s) | 1659 |
| SspDI | GGCGCC | 1 cut(s) | 1394 |
| SspMI | CTAG | 4 cut(s) | 593, 842, 1241, 1364 |
| StyI | CCWWGG | 2 cut(s) | 611, 1176 |
| TaaI | ACNGT | 4 cut(s) | 188, 601, 1090, 1314 |
| TaiI | ACGT | 2 cut(s) | 83, 1431 |
| TaqI | TCGA | 7 cut(s) | 62, 234, 297, 690, 957, 1401, 1692 |
| TaqII | GACCGA | 1 cut(s) | 1355 |
| TasI | AATT | 1 cut(s) | 1659 |
| TfiI | GAWTC | 1 cut(s) | 831 |
| Tru1I | TTAA | 2 cut(s) | 90, 1098 |
| Tru9I | TTAA | 2 cut(s) | 90, 1098 |
| TscAI | CASTG | 5 cut(s) | 381, 399, 426, 813, 1285 |
| TseFI | GTSAC | 4 cut(s) | 455, 601, 808, 1058 |
| TseI | GCWGC | 9 cut(s) | 427, 515, 776, 916, 946, 1201, 1234, 1292, 1653 |
| Tsp45I | GTSAC | 4 cut(s) | 455, 601, 808, 1058 |
| TspGWI | ACGGA | 4 cut(s) | 178, 244, 756, 1241 |
| TspMI | CCCGGG | 2 cut(s) | 1593, 1632 |
| TspRI | CASTG | 5 cut(s) | 381, 399, 426, 813, 1285 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1342 |
| VpaK11BI | GGWCC | 3 cut(s) | 18, 736, 1638 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1157 |
| XceI | RCATGY | 3 cut(s) | 928, 1381, 1676 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 449 |
| XmaI | CCCGGG | 2 cut(s) | 1593, 1632 |
| XspI | CTAG | 4 cut(s) | 593, 842, 1241, 1364 |