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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1307 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 817 |
| AbsI | CCTCGAGG | 1 cut(s) | 529 |
| Acc36I | ACCTGC | 1 cut(s) | 1307 |
| Acc65I | GGTACC | 1 cut(s) | 1571 |
| AccB1I | GGYRCC | 4 cut(s) | 999, 1319, 1355, 1571 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 159, 1365 |
| AccBSI | CCGCTC | 5 cut(s) | 757, 784, 922, 997, 1455 |
| AccI | GTMKAC | 2 cut(s) | 821, 1152 |
| AccII | CGCG | 7 cut(s) | 228, 237, 620, 632, 728, 899, 1038 |
| AcoI | YGGCCR | 1 cut(s) | 859 |
| AcsI | RAATTY | 1 cut(s) | 737 |
| AcuI | CTGAAG | 2 cut(s) | 1364, 1545 |
| AcyI | GRCGYC | 1 cut(s) | 1356 |
| AdeI | CACNNNGTG | 1 cut(s) | 472 |
| AfaI | GTAC | 3 cut(s) | 324, 492, 1573 |
| AflII | CTTAAG | 2 cut(s) | 371, 742 |
| AgsI | TTSAA | 7 cut(s) | 58, 140, 569, 833, 1120, 1195, 1270 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1587 |
| AhlI | ACTAGT | 1 cut(s) | 1616 |
| AjnI | CCWGG | 5 cut(s) | 158, 317, 391, 483, 1533 |
| Alw21I | GWGCWC | 1 cut(s) | 468 |
| Alw26I | GTCTC | 4 cut(s) | 392, 606, 953, 1534 |
| Alw44I | GTGCAC | 1 cut(s) | 464 |
| Ama87I | CYCGRG | 6 cut(s) | 22, 177, 529, 752, 912, 950 |
| AoxI | GGCC | 8 cut(s) | 341, 660, 859, 969, 1237, 1248, 1536, 1627 |
| ApaI | GGGCCC | 1 cut(s) | 1631 |
| ApaLI | GTGCAC | 1 cut(s) | 464 |
| ApoI | RAATTY | 1 cut(s) | 737 |
| Asp718I | GGTACC | 1 cut(s) | 1571 |
| AspLEI | GCGC | 5 cut(s) | 237, 263, 728, 1358, 1555 |
| AspS9I | GGNCC | 7 cut(s) | 341, 810, 1066, 1237, 1481, 1627, 1628 |
| AsuC2I | CCSGG | 1 cut(s) | 40 |
| AsuHPI | GGTGA | 4 cut(s) | 484, 535, 685, 1657 |
| AsuNHI | GCTAGC | 1 cut(s) | 5 |
| AvaI | CYCGRG | 6 cut(s) | 22, 177, 529, 752, 912, 950 |
| AvaII | GGWCC | 3 cut(s) | 810, 1066, 1481 |
| BaeGI | GKGCMC | 3 cut(s) | 456, 468, 1631 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1563, 1596 |
| BalI | TGGCCA | 1 cut(s) | 861 |
| BanI | GGYRCC | 4 cut(s) | 999, 1319, 1355, 1571 |
| BanII | GRGCYC | 1 cut(s) | 1631 |
| BauI | CACGAG | 1 cut(s) | 467 |
| Bbv12I | GWGCWC | 1 cut(s) | 468 |
| BccI | CCATC | 7 cut(s) | 275, 800, 850, 870, 1021, 1487, 1562 |
| BceAI | ACGGC | 4 cut(s) | 446, 1040, 1241, 1307 |
| BciT130I | CCWGG | 5 cut(s) | 160, 319, 393, 485, 1535 |
| BcnI | CCSGG | 1 cut(s) | 40 |
| BcoDI | GTCTC | 4 cut(s) | 392, 606, 953, 1534 |
| BcuI | ACTAGT | 1 cut(s) | 1616 |
| BfaI | CTAG | 9 cut(s) | 6, 131, 201, 248, 267, 713, 1443, 1458, 1617 |
| BfmI | CTRYAG | 2 cut(s) | 105, 1160 |
| BfoI | RGCGCY | 2 cut(s) | 264, 1359 |
| BfrI | CTTAAG | 2 cut(s) | 371, 742 |
| BfuAI | ACCTGC | 1 cut(s) | 1307 |
| BglII | AGATCT | 1 cut(s) | 18 |
| Bme1390I | CCNGG | 6 cut(s) | 40, 160, 319, 393, 485, 1535 |
| Bme18I | GGWCC | 3 cut(s) | 810, 1066, 1481 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1587 |
| BmeT110I | CYCGRG | 6 cut(s) | 22, 177, 529, 752, 912, 950 |
| BmgT120I | GGNCC | 7 cut(s) | 341, 810, 1066, 1237, 1481, 1627, 1628 |
| BmrFI | CCNGG | 6 cut(s) | 40, 160, 319, 393, 485, 1535 |
| BmrI | ACTGGG | 1 cut(s) | 1375 |
| BmsI | GCATC | 4 cut(s) | 100, 1012, 1021, 1438 |
| BmtI | GCTAGC | 1 cut(s) | 9 |
| BmuI | ACTGGG | 1 cut(s) | 1375 |
| BpmI | CTGGAG | 2 cut(s) | 1004, 1118 |
| BpuEI | CTTGAG | 1 cut(s) | 1055 |
| BpuMI | CCSGG | 1 cut(s) | 40 |
| BsaAI | YACGTR | 1 cut(s) | 1087 |
| BsaHI | GRCGYC | 1 cut(s) | 1356 |
| BsaI | GGTCTC | 1 cut(s) | 953 |
| BsaWI | WCCGGW | 1 cut(s) | 816 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 480, 510 |
| Bse118I | RCCGGY | 1 cut(s) | 1642 |
| Bse1I | ACTGG | 3 cut(s) | 546, 1370, 1389 |
| BseBI | CCWGG | 5 cut(s) | 160, 319, 393, 485, 1535 |
| BseGI | GGATG | 5 cut(s) | 91, 811, 842, 1036, 1155 |
| BseMII | CTCAG | 2 cut(s) | 771, 1394 |
| BseNI | ACTGG | 3 cut(s) | 546, 1370, 1389 |
| BseSI | GKGCMC | 3 cut(s) | 456, 468, 1631 |
| BseYI | CCCAGC | 4 cut(s) | 449, 1218, 1222, 1632 |
| Bsh1236I | CGCG | 7 cut(s) | 228, 237, 620, 632, 728, 899, 1038 |
| Bsh1285I | CGRYCG | 4 cut(s) | 232, 413, 821, 825 |
| BshFI | GGCC | 8 cut(s) | 343, 662, 861, 971, 1239, 1250, 1538, 1629 |
| BshNI | GGYRCC | 4 cut(s) | 999, 1319, 1355, 1571 |
| BsiEI | CGRYCG | 4 cut(s) | 232, 413, 821, 825 |
| BsiHKAI | GWGCWC | 1 cut(s) | 468 |
| BsiHKCI | CYCGRG | 6 cut(s) | 22, 177, 529, 752, 912, 950 |
| BsiSI | CCGG | 6 cut(s) | 39, 122, 817, 1439, 1484, 1643 |
| BslFI | GGGAC | 4 cut(s) | 823, 1079, 1575, 1665 |
| BsmAI | GTCTC | 4 cut(s) | 392, 606, 953, 1534 |
| BsmBI | CGTCTC | 2 cut(s) | 392, 606 |
| BsmFI | GGGAC | 4 cut(s) | 823, 1079, 1575, 1665 |
| BsnI | GGCC | 8 cut(s) | 343, 662, 861, 971, 1239, 1250, 1538, 1629 |
| Bso31I | GGTCTC | 1 cut(s) | 953 |
| BsoBI | CYCGRG | 6 cut(s) | 22, 177, 529, 752, 912, 950 |
| Bsp120I | GGGCCC | 1 cut(s) | 1627 |
| Bsp1286I | GDGCHC | 3 cut(s) | 456, 468, 1631 |
| Bsp143I | GATC | 4 cut(s) | 18, 229, 474, 624 |
| Bsp19I | CCATGG | 1 cut(s) | 171 |
| BspANI | GGCC | 8 cut(s) | 343, 662, 861, 971, 1239, 1250, 1538, 1629 |
| BspCNI | CTCAG | 2 cut(s) | 772, 1393 |
| BspFNI | CGCG | 7 cut(s) | 228, 237, 620, 632, 728, 899, 1038 |
| BspMAI | CTGCAG | 2 cut(s) | 109, 1164 |
| BspMI | ACCTGC | 1 cut(s) | 1307 |
| BspOI | GCTAGC | 1 cut(s) | 9 |
| BspT107I | GGYRCC | 4 cut(s) | 999, 1319, 1355, 1571 |
| BspTI | CTTAAG | 2 cut(s) | 371, 742 |
| BspTNI | GGTCTC | 1 cut(s) | 953 |
| BsrBI | CCGCTC | 5 cut(s) | 757, 784, 922, 997, 1455 |
| BsrFI | RCCGGY | 1 cut(s) | 1642 |
| BsrI | ACTGG | 3 cut(s) | 546, 1370, 1389 |
| BssAI | RCCGGY | 1 cut(s) | 1642 |
| BssMI | GATC | 4 cut(s) | 18, 229, 474, 624 |
| BssNI | GRCGYC | 1 cut(s) | 1356 |
| BssSI | CACGAG | 1 cut(s) | 467 |
| BssT1I | CCWWGG | 3 cut(s) | 171, 1008, 1137 |
| Bst2BI | CACGAG | 1 cut(s) | 467 |
| Bst2UI | CCWGG | 5 cut(s) | 160, 319, 393, 485, 1535 |
| Bst4CI | ACNGT | 3 cut(s) | 352, 814, 837 |
| Bst6I | CTCTTC | 4 cut(s) | 234, 597, 641, 773 |
| BstACI | GRCGYC | 1 cut(s) | 1356 |
| BstAFI | CTTAAG | 2 cut(s) | 371, 742 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1411 |
| BstBAI | YACGTR | 1 cut(s) | 1087 |
| BstDEI | CTNAG | 2 cut(s) | 780, 1380 |
| BstDSI | CCRYGG | 3 cut(s) | 171, 1036, 1257 |
| BstEII | GGTNACC | 2 cut(s) | 523, 1645 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1007, 1301 |
| BstF5I | GGATG | 5 cut(s) | 91, 811, 842, 1036, 1155 |
| BstFNI | CGCG | 7 cut(s) | 228, 237, 620, 632, 728, 899, 1038 |
| BstH2I | RGCGCY | 2 cut(s) | 264, 1359 |
| BstHHI | GCGC | 5 cut(s) | 237, 263, 728, 1358, 1555 |
| BstKTI | GATC | 4 cut(s) | 21, 232, 477, 627 |
| BstMAI | GTCTC | 4 cut(s) | 392, 606, 953, 1534 |
| BstMBI | GATC | 4 cut(s) | 18, 229, 474, 624 |
| BstMCI | CGRYCG | 4 cut(s) | 232, 413, 821, 825 |
| BstNI | CCWGG | 5 cut(s) | 160, 319, 393, 485, 1535 |
| BstNSI | RCATGY | 1 cut(s) | 539 |
| BstPI | GGTNACC | 2 cut(s) | 523, 1645 |
| BstSCI | CCNGG | 6 cut(s) | 38, 158, 317, 391, 483, 1533 |
| BstSFI | CTRYAG | 2 cut(s) | 105, 1160 |
| BstSLI | GKGCMC | 3 cut(s) | 456, 468, 1631 |
| BstUI | CGCG | 7 cut(s) | 228, 237, 620, 632, 728, 899, 1038 |
| BstX2I | RGATCY | 1 cut(s) | 18 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1546 |
| BstYI | RGATCY | 1 cut(s) | 18 |
| BsuRI | GGCC | 8 cut(s) | 343, 662, 861, 971, 1239, 1250, 1538, 1629 |
| BtgI | CCRYGG | 3 cut(s) | 171, 1036, 1257 |
| BtgZI | GCGATG | 3 cut(s) | 613, 1035, 1040 |
| BtsCI | GGATG | 5 cut(s) | 91, 811, 842, 1036, 1155 |
| BtsI | GCAGTG | 3 cut(s) | 34, 116, 1468 |
| BtsIMutI | CAGTG | 4 cut(s) | 34, 116, 553, 1468 |
| BveI | ACCTGC | 1 cut(s) | 1307 |
| CfoI | GCGC | 5 cut(s) | 237, 263, 728, 1358, 1555 |
| Cfr10I | RCCGGY | 1 cut(s) | 1642 |
| Cfr13I | GGNCC | 7 cut(s) | 341, 810, 1066, 1237, 1481, 1627, 1628 |
| Cfr42I | CCGCGG | 1 cut(s) | 1039 |
| CseI | GACGC | 2 cut(s) | 423, 626 |
| Csp6I | GTAC | 3 cut(s) | 323, 491, 1572 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1582, 1617 |
| CviAII | CATG | 6 cut(s) | 172, 361, 536, 1092, 1546, 1624 |
| CviQI | GTAC | 3 cut(s) | 323, 491, 1572 |
| DdeI | CTNAG | 2 cut(s) | 780, 1380 |
| DinI | GGCGCC | 1 cut(s) | 1357 |
| DpnI | GATC | 4 cut(s) | 20, 231, 476, 626 |
| DpnII | GATC | 4 cut(s) | 18, 229, 474, 624 |
| DraIII | CACNNNGTG | 1 cut(s) | 472 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 817 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1587 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 817 |
| EaeI | YGGCCR | 1 cut(s) | 859 |
| Eam1104I | CTCTTC | 4 cut(s) | 234, 597, 641, 773 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1587 |
| EarI | CTCTTC | 4 cut(s) | 234, 597, 641, 773 |
| EciI | GGCGGA | 6 cut(s) | 84, 470, 813, 1028, 1162, 1267 |
| Eco130I | CCWWGG | 3 cut(s) | 171, 1008, 1137 |
| Eco147I | AGGCCT | 1 cut(s) | 662 |
| Eco24I | GRGCYC | 1 cut(s) | 1631 |
| Eco31I | GGTCTC | 1 cut(s) | 953 |
| Eco47I | GGWCC | 3 cut(s) | 810, 1066, 1481 |
| Eco57I | CTGAAG | 2 cut(s) | 1364, 1545 |
| Eco88I | CYCGRG | 6 cut(s) | 22, 177, 529, 752, 912, 950 |
| Eco91I | GGTNACC | 2 cut(s) | 523, 1645 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1007, 1301 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1066, 1628 |
| EcoO65I | GGTNACC | 2 cut(s) | 523, 1645 |
| EcoRI | GAATTC | 1 cut(s) | 737 |
| EcoRII | CCWGG | 5 cut(s) | 158, 317, 391, 483, 1533 |
| EcoT14I | CCWWGG | 3 cut(s) | 171, 1008, 1137 |
| EcoT38I | GRGCYC | 1 cut(s) | 1631 |
| EgeI | GGCGCC | 1 cut(s) | 1357 |
| EheI | GGCGCC | 1 cut(s) | 1357 |
| ErhI | CCWWGG | 3 cut(s) | 171, 1008, 1137 |
| Esp3I | CGTCTC | 2 cut(s) | 392, 606 |
| FaeI | CATG | 6 cut(s) | 175, 364, 539, 1095, 1549, 1627 |
| FaqI | GGGAC | 4 cut(s) | 823, 1079, 1575, 1665 |
| FatI | CATG | 6 cut(s) | 171, 360, 535, 1091, 1545, 1623 |
| FblI | GTMKAC | 2 cut(s) | 821, 1152 |
| FokI | GGATG | 5 cut(s) | 78, 818, 829, 1043, 1142 |
| FriOI | GRGCYC | 1 cut(s) | 1631 |
| FspBI | CTAG | 9 cut(s) | 6, 131, 201, 248, 267, 713, 1443, 1458, 1617 |
| GlaI | GCGC | 5 cut(s) | 236, 262, 727, 1357, 1554 |
| GsaI | CCCAGC | 4 cut(s) | 453, 1222, 1226, 1636 |
| GsuI | CTGGAG | 2 cut(s) | 1004, 1118 |
| HaeII | RGCGCY | 2 cut(s) | 264, 1359 |
| HaeIII | GGCC | 8 cut(s) | 343, 662, 861, 971, 1239, 1250, 1538, 1629 |
| HapII | CCGG | 6 cut(s) | 39, 122, 817, 1439, 1484, 1643 |
| HgaI | GACGC | 2 cut(s) | 423, 626 |
| HhaI | GCGC | 5 cut(s) | 237, 263, 728, 1358, 1555 |
| Hin1I | GRCGYC | 1 cut(s) | 1356 |
| Hin1II | CATG | 6 cut(s) | 175, 364, 539, 1095, 1549, 1627 |
| Hin6I | GCGC | 5 cut(s) | 235, 261, 726, 1356, 1553 |
| HinP1I | GCGC | 5 cut(s) | 235, 261, 726, 1356, 1553 |
| HincII | GTYRAC | 1 cut(s) | 822 |
| HindII | GTYRAC | 1 cut(s) | 822 |
| HpaII | CCGG | 6 cut(s) | 39, 122, 817, 1439, 1484, 1643 |
| HphI | GGTGA | 4 cut(s) | 484, 535, 685, 1657 |
| Hpy166II | GTNNAC | 3 cut(s) | 466, 822, 1153 |
| Hpy188I | TCNGA | 6 cut(s) | 46, 692, 781, 1246, 1525, 1567 |
| Hpy188III | TCNNGA | 4 cut(s) | 22, 713, 950, 952 |
| Hpy8I | GTNNAC | 3 cut(s) | 466, 822, 1153 |
| Hpy99I | CGWCG | 6 cut(s) | 14, 439, 545, 620, 875, 1328 |
| HpyAV | CCTTC | 6 cut(s) | 601, 664, 1114, 1141, 1228, 1276 |
| HpyCH4III | ACNGT | 3 cut(s) | 352, 814, 837 |
| HpyCH4IV | ACGT | 4 cut(s) | 216, 990, 1086, 1583 |
| HpyCH4V | TGCA | 9 cut(s) | 91, 107, 466, 700, 734, 880, 964, 1162, 1623 |
| HpyF3I | CTNAG | 2 cut(s) | 780, 1380 |
| HpySE526I | ACGT | 4 cut(s) | 216, 990, 1086, 1583 |
| Hsp92I | GRCGYC | 1 cut(s) | 1356 |
| Hsp92II | CATG | 6 cut(s) | 175, 364, 539, 1095, 1549, 1627 |
| HspAI | GCGC | 5 cut(s) | 235, 261, 726, 1356, 1553 |
| KasI | GGCGCC | 1 cut(s) | 1355 |
| KpnI | GGTACC | 1 cut(s) | 1575 |
| KspI | CCGCGG | 1 cut(s) | 1039 |
| Kzo9I | GATC | 4 cut(s) | 18, 229, 474, 624 |
| LmnI | GCTCC | 6 cut(s) | 106, 514, 1099, 1123, 1441, 1675 |
| LweI | GCATC | 4 cut(s) | 100, 1012, 1021, 1438 |
| MaeI | CTAG | 9 cut(s) | 6, 131, 201, 248, 267, 713, 1443, 1458, 1617 |
| MaeII | ACGT | 4 cut(s) | 216, 990, 1086, 1583 |
| MaeIII | GTNAC | 5 cut(s) | 352, 496, 523, 1579, 1645 |
| MalI | GATC | 4 cut(s) | 20, 231, 476, 626 |
| MbiI | CCGCTC | 5 cut(s) | 757, 784, 922, 997, 1455 |
| MboI | GATC | 4 cut(s) | 18, 229, 474, 624 |
| MboII | GAAGA | 9 cut(s) | 251, 469, 557, 611, 614, 658, 760, 1207, 1667 |
| MflI | RGATCY | 1 cut(s) | 18 |
| MhlI | GDGCHC | 3 cut(s) | 456, 468, 1631 |
| MlsI | TGGCCA | 1 cut(s) | 861 |
| MluCI | AATT | 2 cut(s) | 306, 737 |
| MluNI | TGGCCA | 1 cut(s) | 861 |
| Mly113I | GGCGCC | 1 cut(s) | 1356 |
| MlyI | GAGTC | 3 cut(s) | 320, 1178, 1597 |
| MmeI | TCCRAC | 2 cut(s) | 492, 1182 |
| Mox20I | TGGCCA | 1 cut(s) | 861 |
| MscI | TGGCCA | 1 cut(s) | 861 |
| MseI | TTAA | 3 cut(s) | 372, 743, 1059 |
| Msp20I | TGGCCA | 1 cut(s) | 861 |
| MspA1I | CMGCKG | 8 cut(s) | 278, 449, 928, 1038, 1165, 1222, 1418, 1510 |
| MspCI | CTTAAG | 2 cut(s) | 371, 742 |
| MspI | CCGG | 6 cut(s) | 39, 122, 817, 1439, 1484, 1643 |
| MspR9I | CCNGG | 6 cut(s) | 40, 160, 319, 393, 485, 1535 |
| MvaI | CCWGG | 5 cut(s) | 160, 319, 393, 485, 1535 |
| MvnI | CGCG | 7 cut(s) | 228, 237, 620, 632, 728, 899, 1038 |
| NarI | GGCGCC | 1 cut(s) | 1356 |
| NciI | CCSGG | 1 cut(s) | 40 |
| NcoI | CCATGG | 1 cut(s) | 171 |
| NdeII | GATC | 4 cut(s) | 18, 229, 474, 624 |
| NheI | GCTAGC | 1 cut(s) | 5 |
| NlaIII | CATG | 6 cut(s) | 175, 364, 539, 1095, 1549, 1627 |
| NmuCI | GTSAC | 3 cut(s) | 523, 1579, 1645 |
| NspI | RCATGY | 1 cut(s) | 539 |
| PaeR7I | CTCGAG | 5 cut(s) | 22, 177, 529, 752, 950 |
| PaqCI | CACCTGC | 1 cut(s) | 1307 |
| PasI | CCCWGGG | 2 cut(s) | 159, 392 |
| PceI | AGGCCT | 1 cut(s) | 662 |
| PfeI | GAWTC | 7 cut(s) | 35, 83, 125, 364, 439, 716, 1262 |
| PflFI | GACNNNGTC | 1 cut(s) | 1367 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 159, 1365 |
| Ple19I | CGATCG | 1 cut(s) | 232 |
| PleI | GAGTC | 3 cut(s) | 319, 1177, 1596 |
| PluTI | GGCGCC | 1 cut(s) | 1359 |
| PpsI | GAGTC | 3 cut(s) | 319, 1177, 1596 |
| Ppu21I | YACGTR | 1 cut(s) | 1087 |
| PpuMI | RGGWCCY | 1 cut(s) | 1066 |
| Psp5II | RGGWCCY | 1 cut(s) | 1066 |
| Psp6I | CCWGG | 5 cut(s) | 158, 317, 391, 483, 1533 |
| PspEI | GGTNACC | 2 cut(s) | 523, 1645 |
| PspFI | CCCAGC | 4 cut(s) | 449, 1218, 1222, 1632 |
| PspGI | CCWGG | 5 cut(s) | 158, 317, 391, 483, 1533 |
| PspOMI | GGGCCC | 1 cut(s) | 1627 |
| PspPI | GGNCC | 7 cut(s) | 341, 810, 1066, 1237, 1481, 1627, 1628 |
| PspPPI | RGGWCCY | 1 cut(s) | 1066 |
| PspXI | VCTCGAGB | 3 cut(s) | 177, 529, 752 |
| PstI | CTGCAG | 2 cut(s) | 109, 1164 |
| PsuI | RGATCY | 1 cut(s) | 18 |
| PsyI | GACNNNGTC | 1 cut(s) | 1367 |
| PvuI | CGATCG | 1 cut(s) | 232 |
| PvuII | CAGCTG | 3 cut(s) | 449, 928, 1222 |
| RsaI | GTAC | 3 cut(s) | 324, 492, 1573 |
| RsaNI | GTAC | 3 cut(s) | 323, 491, 1572 |
| SacII | CCGCGG | 1 cut(s) | 1039 |
| SalI | GTCGAC | 1 cut(s) | 820 |
| SaqAI | TTAA | 3 cut(s) | 372, 743, 1059 |
| Sau3AI | GATC | 4 cut(s) | 18, 229, 474, 624 |
| Sau96I | GGNCC | 7 cut(s) | 341, 810, 1066, 1237, 1481, 1627, 1628 |
| SbfI | CCTGCAGG | 1 cut(s) | 109 |
| SchI | GAGTC | 3 cut(s) | 320, 1178, 1597 |
| ScrFI | CCNGG | 6 cut(s) | 40, 160, 319, 393, 485, 1535 |
| SdaI | CCTGCAGG | 1 cut(s) | 109 |
| SduI | GDGCHC | 3 cut(s) | 456, 468, 1631 |
| SfaNI | GCATC | 4 cut(s) | 100, 1012, 1021, 1438 |
| SfcI | CTRYAG | 2 cut(s) | 105, 1160 |
| SfoI | GGCGCC | 1 cut(s) | 1357 |
| Sfr274I | CTCGAG | 5 cut(s) | 22, 177, 529, 752, 950 |
| Sfr303I | CCGCGG | 1 cut(s) | 1039 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1642 |
| SgrBI | CCGCGG | 1 cut(s) | 1039 |
| SinI | GGWCC | 3 cut(s) | 810, 1066, 1481 |
| SlaI | CTCGAG | 5 cut(s) | 22, 177, 529, 752, 950 |
| SmlI | CTYRAG | 8 cut(s) | 22, 177, 371, 529, 742, 752, 950, 1070 |
| SmoI | CTYRAG | 8 cut(s) | 22, 177, 371, 529, 742, 752, 950, 1070 |
| SpeI | ACTAGT | 1 cut(s) | 1616 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 109 |
| Sse9I | AATT | 2 cut(s) | 306, 737 |
| SseBI | AGGCCT | 1 cut(s) | 662 |
| SspDI | GGCGCC | 1 cut(s) | 1355 |
| SspMI | CTAG | 9 cut(s) | 6, 131, 201, 248, 267, 713, 1443, 1458, 1617 |
| StuI | AGGCCT | 1 cut(s) | 662 |
| StyD4I | CCNGG | 6 cut(s) | 38, 158, 317, 391, 483, 1533 |
| StyI | CCWWGG | 3 cut(s) | 171, 1008, 1137 |
| TaaI | ACNGT | 3 cut(s) | 352, 814, 837 |
| TaiI | ACGT | 4 cut(s) | 219, 993, 1089, 1586 |
| TaqI | TCGA | 8 cut(s) | 23, 178, 437, 530, 753, 821, 951, 1397 |
| TaqII | GACCGA | 1 cut(s) | 1551 |
| TasI | AATT | 2 cut(s) | 306, 737 |
| TfiI | GAWTC | 7 cut(s) | 35, 83, 125, 364, 439, 716, 1262 |
| Tru1I | TTAA | 3 cut(s) | 372, 743, 1059 |
| Tru9I | TTAA | 3 cut(s) | 372, 743, 1059 |
| TscAI | CASTG | 4 cut(s) | 34, 123, 553, 1468 |
| TseFI | GTSAC | 3 cut(s) | 523, 1579, 1645 |
| Tsp45I | GTSAC | 3 cut(s) | 523, 1579, 1645 |
| TspDTI | ATGAA | 4 cut(s) | 377, 612, 1534, 1668 |
| TspGWI | ACGGA | 1 cut(s) | 859 |
| TspRI | CASTG | 4 cut(s) | 34, 123, 553, 1468 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1367 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 159, 1365 |
| Vha464I | CTTAAG | 2 cut(s) | 371, 742 |
| VneI | GTGCAC | 1 cut(s) | 464 |
| VpaK11BI | GGWCC | 3 cut(s) | 810, 1066, 1481 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1007, 1301 |
| XapI | RAATTY | 1 cut(s) | 737 |
| XbaI | TCTAGA | 1 cut(s) | 712 |
| XceI | RCATGY | 1 cut(s) | 539 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 979 |
| XhoI | CTCGAG | 5 cut(s) | 22, 177, 529, 752, 950 |
| XmiI | GTMKAC | 2 cut(s) | 821, 1152 |
| XspI | CTAG | 9 cut(s) | 6, 131, 201, 248, 267, 713, 1443, 1458, 1617 |