Putative gypsy type transposon
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 12 |
| Acc36I | ACCTGC | 2 cut(s) | 703, 1602 |
| Acc65I | GGTACC | 1 cut(s) | 788 |
| AccB1I | GGYRCC | 6 cut(s) | 526, 788, 1156, 1952, 1988, 2093 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 159, 591, 1998 |
| AccBSI | CCGCTC | 5 cut(s) | 887, 1390, 1417, 1555, 1708 |
| AccI | GTMKAC | 1 cut(s) | 1454 |
| AccII | CGCG | 6 cut(s) | 62, 187, 927, 1273, 1671, 1769 |
| AccIII | TCCGGA | 2 cut(s) | 38, 190 |
| AclWI | GGATC | 3 cut(s) | 49, 183, 454 |
| AcoI | YGGCCR | 7 cut(s) | 3, 782, 1161, 1680, 1764, 1881, 2019 |
| AcsI | RAATTY | 2 cut(s) | 73, 540 |
| AcuI | CTGAAG | 4 cut(s) | 413, 1462, 1778, 1877 |
| AcyI | GRCGYC | 5 cut(s) | 9, 1157, 1633, 1989, 2168 |
| AdeI | CACNNNGTG | 1 cut(s) | 1172 |
| AfaI | GTAC | 7 cut(s) | 686, 790, 899, 1449, 1483, 1919, 2059 |
| AflIII | ACRYGT | 1 cut(s) | 48 |
| AgsI | TTSAA | 4 cut(s) | 539, 1586, 1787, 2090 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1242 |
| AjiI | CACGTC | 4 cut(s) | 49, 1172, 1318, 1624 |
| AjnI | CCWGG | 8 cut(s) | 412, 504, 1014, 1107, 1605, 1701, 2077, 2184 |
| AluBI | AGCT | 5 cut(s) | 427, 523, 1345, 1561, 2042 |
| AluI | AGCT | 5 cut(s) | 427, 523, 1345, 1561, 2042 |
| Alw21I | GWGCWC | 1 cut(s) | 489 |
| Alw26I | GTCTC | 4 cut(s) | 1013, 1690, 1692, 1749 |
| Alw44I | GTGCAC | 1 cut(s) | 485 |
| AlwI | GGATC | 3 cut(s) | 49, 183, 454 |
| Ama87I | CYCGRG | 2 cut(s) | 1336, 2101 |
| Aor13HI | TCCGGA | 2 cut(s) | 38, 190 |
| ApaLI | GTGCAC | 1 cut(s) | 485 |
| ApoI | RAATTY | 2 cut(s) | 73, 540 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1791, 1848 |
| Asp718I | GGTACC | 1 cut(s) | 788 |
| AspLEI | GCGC | 6 cut(s) | 62, 742, 1030, 1159, 1197, 1991 |
| AspS9I | GGNCC | 8 cut(s) | 92, 472, 644, 831, 1012, 1244, 1295, 1603 |
| AsuC2I | CCSGG | 3 cut(s) | 786, 1760, 2129 |
| AsuHPI | GGTGA | 5 cut(s) | 1204, 1397, 1397, 1853, 2023 |
| AvaI | CYCGRG | 2 cut(s) | 1336, 2101 |
| AvaII | GGWCC | 6 cut(s) | 92, 644, 831, 1012, 1244, 1295 |
| BaeGI | GKGCMC | 3 cut(s) | 489, 1497, 1957 |
| BanI | GGYRCC | 6 cut(s) | 526, 788, 1156, 1952, 1988, 2093 |
| BauI | CACGAG | 2 cut(s) | 488, 1514 |
| BbsI | GAAGAC | 1 cut(s) | 971 |
| Bbv12I | GWGCWC | 1 cut(s) | 489 |
| BbvCI | CCTCAGC | 1 cut(s) | 1863 |
| BccI | CCATC | 4 cut(s) | 433, 887, 1086, 2000 |
| BceAI | ACGGC | 9 cut(s) | 365, 467, 1343, 1445, 1500, 1667, 1847, 1857, 2006 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 328, 362, 386, 420, 597, 631, 1637, 1671 |
| BciT130I | CCWGG | 8 cut(s) | 414, 506, 1016, 1109, 1607, 1703, 2079, 2186 |
| BciVI | GTATCC | 1 cut(s) | 301 |
| BcnI | CCSGG | 3 cut(s) | 786, 1760, 2129 |
| BcoDI | GTCTC | 4 cut(s) | 1013, 1690, 1692, 1749 |
| BfaI | CTAG | 8 cut(s) | 131, 201, 1263, 1323, 1346, 1812, 1835, 1958 |
| BfmI | CTRYAG | 2 cut(s) | 146, 1976 |
| BfoI | RGCGCY | 3 cut(s) | 1031, 1160, 1992 |
| BfuAI | ACCTGC | 2 cut(s) | 703, 1602 |
| BfuI | GTATCC | 1 cut(s) | 301 |
| BlpI | GCTNAGC | 1 cut(s) | 1031 |
| BmcAI | AGTACT | 1 cut(s) | 2059 |
| Bme18I | GGWCC | 6 cut(s) | 92, 644, 831, 1012, 1244, 1295 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1242 |
| BmeT110I | CYCGRG | 2 cut(s) | 1336, 2101 |
| BmgBI | CACGTC | 4 cut(s) | 49, 1172, 1318, 1624 |
| BmgT120I | GGNCC | 8 cut(s) | 92, 472, 644, 831, 1012, 1244, 1295, 1603 |
| BmrI | ACTGGG | 2 cut(s) | 2008, 2152 |
| BmsI | GCATC | 5 cut(s) | 591, 945, 1645, 1654, 2004 |
| BmuI | ACTGGG | 2 cut(s) | 2008, 2152 |
| BoxI | GACNNNNGTC | 1 cut(s) | 975 |
| BpiI | GAAGAC | 1 cut(s) | 971 |
| BplI | GAGNNNNNCTC | 8 cut(s) | 440, 472, 1319, 1351, 1334, 1366, 2123, 2155 |
| BpmI | CTGGAG | 1 cut(s) | 1724 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1562, 1863 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1031 |
| BpuEI | CTTGAG | 1 cut(s) | 781 |
| BpuMI | CCSGG | 3 cut(s) | 786, 1760, 2129 |
| BsaAI | YACGTR | 1 cut(s) | 688 |
| BsaHI | GRCGYC | 5 cut(s) | 9, 1157, 1633, 1989, 2168 |
| BsaI | GGTCTC | 2 cut(s) | 1692, 1749 |
| BsaWI | WCCGGW | 2 cut(s) | 38, 190 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 282, 312, 1291, 1321 |
| Bse118I | RCCGGY | 4 cut(s) | 387, 1159, 1949, 2017 |
| Bse1I | ACTGG | 5 cut(s) | 684, 1049, 1123, 2003, 2158 |
| Bse3DI | GCAATG | 1 cut(s) | 1215 |
| BseAI | TCCGGA | 2 cut(s) | 38, 190 |
| BseBI | CCWGG | 8 cut(s) | 414, 506, 1016, 1109, 1607, 1703, 2079, 2186 |
| BseGI | GGATG | 3 cut(s) | 372, 879, 1669 |
| BseMI | GCAATG | 1 cut(s) | 1215 |
| BseMII | CTCAG | 5 cut(s) | 303, 713, 1032, 1854, 2156 |
| BseNI | ACTGG | 5 cut(s) | 684, 1049, 1123, 2003, 2158 |
| BseRI | GAGGAG | 2 cut(s) | 461, 1583 |
| BseSI | GKGCMC | 3 cut(s) | 489, 1497, 1957 |
| BseX3I | CGGCCG | 2 cut(s) | 1881, 2019 |
| BseYI | CCCAGC | 3 cut(s) | 278, 990, 1420 |
| BsgI | GTGCAG | 6 cut(s) | 126, 282, 322, 1143, 1199, 1496 |
| Bsh1236I | CGCG | 6 cut(s) | 62, 187, 927, 1273, 1671, 1769 |
| Bsh1285I | CGRYCG | 4 cut(s) | 1454, 1458, 1884, 2022 |
| BshNI | GGYRCC | 6 cut(s) | 526, 788, 1156, 1952, 1988, 2093 |
| BsiEI | CGRYCG | 4 cut(s) | 1454, 1458, 1884, 2022 |
| BsiHKAI | GWGCWC | 1 cut(s) | 489 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1336, 2101 |
| BsiSI | CCGG | 9 cut(s) | 39, 191, 388, 785, 1160, 1759, 1950, 2018, 2129 |
| BslFI | GGGAC | 3 cut(s) | 176, 657, 2155 |
| BsmAI | GTCTC | 4 cut(s) | 1013, 1690, 1692, 1749 |
| BsmBI | CGTCTC | 1 cut(s) | 1690 |
| BsmFI | GGGAC | 3 cut(s) | 176, 657, 2155 |
| Bso31I | GGTCTC | 2 cut(s) | 1692, 1749 |
| BsoBI | CYCGRG | 2 cut(s) | 1336, 2101 |
| Bsp1286I | GDGCHC | 3 cut(s) | 489, 1497, 1957 |
| Bsp13I | TCCGGA | 2 cut(s) | 38, 190 |
| Bsp143I | GATC | 4 cut(s) | 41, 175, 234, 459 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1031 |
| BspCNI | CTCAG | 5 cut(s) | 304, 714, 1033, 1855, 2155 |
| BspEI | TCCGGA | 2 cut(s) | 38, 190 |
| BspFNI | CGCG | 6 cut(s) | 62, 187, 927, 1273, 1671, 1769 |
| BspMAI | CTGCAG | 1 cut(s) | 1980 |
| BspMI | ACCTGC | 2 cut(s) | 703, 1602 |
| BspPI | GGATC | 3 cut(s) | 49, 183, 454 |
| BspQI | GCTCTTC | 1 cut(s) | 234 |
| BspT107I | GGYRCC | 6 cut(s) | 526, 788, 1156, 1952, 1988, 2093 |
| BspTNI | GGTCTC | 2 cut(s) | 1692, 1749 |
| BsrBI | CCGCTC | 5 cut(s) | 887, 1390, 1417, 1555, 1708 |
| BsrDI | GCAATG | 1 cut(s) | 1215 |
| BsrFI | RCCGGY | 4 cut(s) | 387, 1159, 1949, 2017 |
| BsrI | ACTGG | 5 cut(s) | 684, 1049, 1123, 2003, 2158 |
| BssAI | RCCGGY | 4 cut(s) | 387, 1159, 1949, 2017 |
| BssMI | GATC | 4 cut(s) | 41, 175, 234, 459 |
| BssNI | GRCGYC | 5 cut(s) | 9, 1157, 1633, 1989, 2168 |
| BssSI | CACGAG | 2 cut(s) | 488, 1514 |
| BssT1I | CCWWGG | 3 cut(s) | 697, 733, 1545 |
| Bst2BI | CACGAG | 2 cut(s) | 488, 1514 |
| Bst2UI | CCWGG | 8 cut(s) | 414, 506, 1016, 1109, 1607, 1703, 2079, 2186 |
| Bst4CI | ACNGT | 6 cut(s) | 159, 373, 652, 1006, 1385, 1452 |
| Bst6I | CTCTTC | 2 cut(s) | 234, 912 |
| BstACI | GRCGYC | 5 cut(s) | 9, 1157, 1633, 1989, 2168 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1121, 1664 |
| BstBAI | YACGTR | 1 cut(s) | 688 |
| BstDEI | CTNAG | 7 cut(s) | 312, 722, 1031, 1041, 1562, 1863, 2142 |
| BstDSI | CCRYGG | 2 cut(s) | 158, 1669 |
| BstF5I | GGATG | 3 cut(s) | 372, 879, 1669 |
| BstFNI | CGCG | 6 cut(s) | 62, 187, 927, 1273, 1671, 1769 |
| BstH2I | RGCGCY | 3 cut(s) | 1031, 1160, 1992 |
| BstHHI | GCGC | 6 cut(s) | 62, 742, 1030, 1159, 1197, 1991 |
| BstKTI | GATC | 4 cut(s) | 44, 178, 237, 462 |
| BstMAI | GTCTC | 4 cut(s) | 1013, 1690, 1692, 1749 |
| BstMBI | GATC | 4 cut(s) | 41, 175, 234, 459 |
| BstMCI | CGRYCG | 4 cut(s) | 1454, 1458, 1884, 2022 |
| BstNI | CCWGG | 8 cut(s) | 414, 506, 1016, 1109, 1607, 1703, 2079, 2186 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 975 |
| BstSFI | CTRYAG | 2 cut(s) | 146, 1976 |
| BstSLI | GKGCMC | 3 cut(s) | 489, 1497, 1957 |
| BstUI | CGCG | 6 cut(s) | 62, 187, 927, 1273, 1671, 1769 |
| BstV2I | GAAGAC | 1 cut(s) | 971 |
| BstX2I | RGATCY | 1 cut(s) | 41 |
| BstYI | RGATCY | 1 cut(s) | 41 |
| BstZI | CGGCCG | 2 cut(s) | 1881, 2019 |
| BsuI | GTATCC | 1 cut(s) | 301 |
| BtgI | CCRYGG | 2 cut(s) | 158, 1669 |
| BtrI | CACGTC | 4 cut(s) | 49, 1172, 1318, 1624 |
| BtsCI | GGATG | 3 cut(s) | 372, 879, 1669 |
| BtsI | GCAGTG | 4 cut(s) | 34, 116, 1093, 1197 |
| BtsIMutI | CAGTG | 7 cut(s) | 34, 116, 608, 1056, 1093, 1197, 2194 |
| BveI | ACCTGC | 2 cut(s) | 703, 1602 |
| CciNI | GCGGCCGC | 1 cut(s) | 1881 |
| CfoI | GCGC | 6 cut(s) | 62, 742, 1030, 1159, 1197, 1991 |
| Cfr10I | RCCGGY | 4 cut(s) | 387, 1159, 1949, 2017 |
| Cfr13I | GGNCC | 8 cut(s) | 92, 472, 644, 831, 1012, 1244, 1295, 1603 |
| Cfr42I | CCGCGG | 1 cut(s) | 1672 |
| CseI | GACGC | 5 cut(s) | 176, 419, 1521, 1641, 2157 |
| Csp6I | GTAC | 7 cut(s) | 685, 789, 898, 1448, 1482, 1918, 2058 |
| CviAII | CATG | 4 cut(s) | 476, 772, 1063, 2084 |
| CviQI | GTAC | 7 cut(s) | 685, 789, 898, 1448, 1482, 1918, 2058 |
| DdeI | CTNAG | 7 cut(s) | 312, 722, 1031, 1041, 1562, 1863, 2142 |
| DinI | GGCGCC | 2 cut(s) | 1158, 1990 |
| DpnI | GATC | 4 cut(s) | 43, 177, 236, 461 |
| DpnII | GATC | 4 cut(s) | 41, 175, 234, 459 |
| DraIII | CACNNNGTG | 1 cut(s) | 1172 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1242 |
| EaeI | YGGCCR | 7 cut(s) | 3, 782, 1161, 1680, 1764, 1881, 2019 |
| EagI | CGGCCG | 2 cut(s) | 1881, 2019 |
| Eam1104I | CTCTTC | 2 cut(s) | 234, 912 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1242 |
| EarI | CTCTTC | 2 cut(s) | 234, 912 |
| EciI | GGCGGA | 6 cut(s) | 80, 423, 967, 1634, 2034, 2136 |
| EclXI | CGGCCG | 2 cut(s) | 1881, 2019 |
| Eco130I | CCWWGG | 3 cut(s) | 697, 733, 1545 |
| Eco147I | AGGCCT | 3 cut(s) | 455, 1252, 1581 |
| Eco31I | GGTCTC | 2 cut(s) | 1692, 1749 |
| Eco47I | GGWCC | 6 cut(s) | 92, 644, 831, 1012, 1244, 1295 |
| Eco52I | CGGCCG | 2 cut(s) | 1881, 2019 |
| Eco57I | CTGAAG | 4 cut(s) | 413, 1462, 1778, 1877 |
| Eco88I | CYCGRG | 2 cut(s) | 1336, 2101 |
| EcoRII | CCWGG | 8 cut(s) | 412, 504, 1014, 1107, 1605, 1701, 2077, 2184 |
| EcoT14I | CCWWGG | 3 cut(s) | 697, 733, 1545 |
| EgeI | GGCGCC | 2 cut(s) | 1158, 1990 |
| EheI | GGCGCC | 2 cut(s) | 1158, 1990 |
| ErhI | CCWWGG | 3 cut(s) | 697, 733, 1545 |
| Esp3I | CGTCTC | 1 cut(s) | 1690 |
| FaeI | CATG | 4 cut(s) | 479, 775, 1066, 2087 |
| FaqI | GGGAC | 3 cut(s) | 176, 657, 2155 |
| FatI | CATG | 4 cut(s) | 475, 771, 1062, 2083 |
| FblI | GTMKAC | 1 cut(s) | 1454 |
| FokI | GGATG | 3 cut(s) | 379, 866, 1676 |
| FspBI | CTAG | 8 cut(s) | 131, 201, 1263, 1323, 1346, 1812, 1835, 1958 |
| GlaI | GCGC | 6 cut(s) | 61, 741, 1029, 1158, 1196, 1990 |
| GsaI | CCCAGC | 3 cut(s) | 282, 994, 1424 |
| GsuI | CTGGAG | 1 cut(s) | 1724 |
| HaeII | RGCGCY | 3 cut(s) | 1031, 1160, 1992 |
| HapII | CCGG | 9 cut(s) | 39, 191, 388, 785, 1160, 1759, 1950, 2018, 2129 |
| HgaI | GACGC | 5 cut(s) | 176, 419, 1521, 1641, 2157 |
| HhaI | GCGC | 6 cut(s) | 62, 742, 1030, 1159, 1197, 1991 |
| Hin1I | GRCGYC | 5 cut(s) | 9, 1157, 1633, 1989, 2168 |
| Hin1II | CATG | 4 cut(s) | 479, 775, 1066, 2087 |
| Hin6I | GCGC | 6 cut(s) | 60, 740, 1028, 1157, 1195, 1989 |
| HinP1I | GCGC | 6 cut(s) | 60, 740, 1028, 1157, 1195, 1989 |
| HincII | GTYRAC | 5 cut(s) | 385, 1002, 1455, 1465, 1932 |
| HindII | GTYRAC | 5 cut(s) | 385, 1002, 1455, 1465, 1932 |
| HpaII | CCGG | 9 cut(s) | 39, 191, 388, 785, 1160, 1759, 1950, 2018, 2129 |
| HphI | GGTGA | 5 cut(s) | 1204, 1397, 1397, 1853, 2023 |
| Hpy188III | TCNNGA | 3 cut(s) | 39, 191, 754 |
| Hpy99I | CGWCG | 9 cut(s) | 11, 350, 811, 1173, 1240, 1508, 1537, 1635, 1915 |
| HpyCH4III | ACNGT | 6 cut(s) | 159, 373, 652, 1006, 1385, 1452 |
| HpyCH4IV | ACGT | 9 cut(s) | 9, 48, 113, 165, 687, 1171, 1317, 1623, 1965 |
| HpyF3I | CTNAG | 7 cut(s) | 312, 722, 1031, 1041, 1562, 1863, 2142 |
| HpySE526I | ACGT | 9 cut(s) | 9, 48, 113, 165, 687, 1171, 1317, 1623, 1965 |
| Hsp92I | GRCGYC | 5 cut(s) | 9, 1157, 1633, 1989, 2168 |
| Hsp92II | CATG | 4 cut(s) | 479, 775, 1066, 2087 |
| HspAI | GCGC | 6 cut(s) | 60, 740, 1028, 1157, 1195, 1989 |
| KasI | GGCGCC | 2 cut(s) | 1156, 1988 |
| Kpn2I | TCCGGA | 2 cut(s) | 38, 190 |
| KpnI | GGTACC | 1 cut(s) | 792 |
| KroI | GCCGGC | 2 cut(s) | 1159, 2017 |
| KroNI | GCCGGC | 2 cut(s) | 1161, 2019 |
| KspI | CCGCGG | 1 cut(s) | 1672 |
| Kzo9I | GATC | 4 cut(s) | 41, 175, 234, 459 |
| LguI | GCTCTTC | 1 cut(s) | 234 |
| LweI | GCATC | 5 cut(s) | 591, 945, 1645, 1654, 2004 |
| MaeI | CTAG | 8 cut(s) | 131, 201, 1263, 1323, 1346, 1812, 1835, 1958 |
| MaeII | ACGT | 9 cut(s) | 9, 48, 113, 165, 687, 1171, 1317, 1623, 1965 |
| MaeIII | GTNAC | 5 cut(s) | 114, 511, 959, 1088, 1210 |
| MalI | GATC | 4 cut(s) | 43, 177, 236, 461 |
| MbiI | CCGCTC | 5 cut(s) | 887, 1390, 1417, 1555, 1708 |
| MboI | GATC | 4 cut(s) | 41, 175, 234, 459 |
| MboII | GAAGA | 5 cut(s) | 251, 929, 971, 1195, 1291 |
| MflI | RGATCY | 1 cut(s) | 41 |
| MhlI | GDGCHC | 3 cut(s) | 489, 1497, 1957 |
| MluCI | AATT | 5 cut(s) | 73, 540, 858, 1443, 1718 |
| Mly113I | GGCGCC | 2 cut(s) | 1157, 1989 |
| MmeI | TCCRAC | 5 cut(s) | 846, 858, 1206, 1322, 1893 |
| MroI | TCCGGA | 2 cut(s) | 38, 190 |
| MroNI | GCCGGC | 2 cut(s) | 1159, 2017 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1791, 1848 |
| MseI | TTAA | 2 cut(s) | 861, 1827 |
| MspI | CCGG | 9 cut(s) | 39, 191, 388, 785, 1160, 1759, 1950, 2018, 2129 |
| MvaI | CCWGG | 8 cut(s) | 414, 506, 1016, 1109, 1607, 1703, 2079, 2186 |
| MvnI | CGCG | 6 cut(s) | 62, 187, 927, 1273, 1671, 1769 |
| NaeI | GCCGGC | 2 cut(s) | 1161, 2019 |
| NarI | GGCGCC | 2 cut(s) | 1157, 1989 |
| NciI | CCSGG | 3 cut(s) | 786, 1760, 2129 |
| NdeII | GATC | 4 cut(s) | 41, 175, 234, 459 |
| NgoMIV | GCCGGC | 2 cut(s) | 1159, 2017 |
| NlaIII | CATG | 4 cut(s) | 479, 775, 1066, 2087 |
| NmeAIII | GCCGAG | 2 cut(s) | 1393, 1846 |
| NmuCI | GTSAC | 4 cut(s) | 114, 511, 1088, 1210 |
| NotI | GCGGCCGC | 1 cut(s) | 1881 |
| PaeR7I | CTCGAG | 1 cut(s) | 1336 |
| PasI | CCCWGGG | 1 cut(s) | 1606 |
| PceI | AGGCCT | 3 cut(s) | 455, 1252, 1581 |
| PciSI | GCTCTTC | 1 cut(s) | 234 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 92, 1244, 1512 |
| PdiI | GCCGGC | 2 cut(s) | 1161, 2019 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1791, 1848 |
| PfeI | GAWTC | 3 cut(s) | 35, 767, 955 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 159, 591, 1998 |
| PfoI | TCCNGGA | 2 cut(s) | 1107, 2127 |
| PluTI | GGCGCC | 2 cut(s) | 1160, 1992 |
| Ppu21I | YACGTR | 1 cut(s) | 688 |
| PshAI | GACNNNNGTC | 1 cut(s) | 975 |
| Psp6I | CCWGG | 8 cut(s) | 412, 504, 1014, 1107, 1605, 1701, 2077, 2184 |
| PspFI | CCCAGC | 3 cut(s) | 278, 990, 1420 |
| PspGI | CCWGG | 8 cut(s) | 412, 504, 1014, 1107, 1605, 1701, 2077, 2184 |
| PspPI | GGNCC | 8 cut(s) | 92, 472, 644, 831, 1012, 1244, 1295, 1603 |
| PspXI | VCTCGAGB | 1 cut(s) | 1336 |
| PstI | CTGCAG | 1 cut(s) | 1980 |
| PsuI | RGATCY | 1 cut(s) | 41 |
| PvuII | CAGCTG | 1 cut(s) | 523 |
| RsaI | GTAC | 7 cut(s) | 686, 790, 899, 1449, 1483, 1919, 2059 |
| RsaNI | GTAC | 7 cut(s) | 685, 789, 898, 1448, 1482, 1918, 2058 |
| SacII | CCGCGG | 1 cut(s) | 1672 |
| SalI | GTCGAC | 1 cut(s) | 1453 |
| SapI | GCTCTTC | 1 cut(s) | 234 |
| SaqAI | TTAA | 2 cut(s) | 861, 1827 |
| Sau3AI | GATC | 4 cut(s) | 41, 175, 234, 459 |
| Sau96I | GGNCC | 8 cut(s) | 92, 472, 644, 831, 1012, 1244, 1295, 1603 |
| ScaI | AGTACT | 1 cut(s) | 2059 |
| SduI | GDGCHC | 3 cut(s) | 489, 1497, 1957 |
| SfaNI | GCATC | 5 cut(s) | 591, 945, 1645, 1654, 2004 |
| SfcI | CTRYAG | 2 cut(s) | 146, 1976 |
| SfoI | GGCGCC | 2 cut(s) | 1158, 1990 |
| Sfr274I | CTCGAG | 1 cut(s) | 1336 |
| Sfr303I | CCGCGG | 1 cut(s) | 1672 |
| SgrBI | CCGCGG | 1 cut(s) | 1672 |
| SinI | GGWCC | 6 cut(s) | 92, 644, 831, 1012, 1244, 1295 |
| SlaI | CTCGAG | 1 cut(s) | 1336 |
| SmlI | CTYRAG | 2 cut(s) | 760, 1336 |
| SmoI | CTYRAG | 2 cut(s) | 760, 1336 |
| Sse9I | AATT | 5 cut(s) | 73, 540, 858, 1443, 1718 |
| SseBI | AGGCCT | 3 cut(s) | 455, 1252, 1581 |
| SspDI | GGCGCC | 2 cut(s) | 1156, 1988 |
| SspMI | CTAG | 8 cut(s) | 131, 201, 1263, 1323, 1346, 1812, 1835, 1958 |
| StuI | AGGCCT | 3 cut(s) | 455, 1252, 1581 |
| StyI | CCWWGG | 3 cut(s) | 697, 733, 1545 |
| TaaI | ACNGT | 6 cut(s) | 159, 373, 652, 1006, 1385, 1452 |
| TaiI | ACGT | 9 cut(s) | 12, 51, 116, 168, 690, 1174, 1320, 1626, 1968 |
| TaqII | GACCGA | 1 cut(s) | 661 |
| TasI | AATT | 5 cut(s) | 73, 540, 858, 1443, 1718 |
| TatI | WGTACW | 2 cut(s) | 1917, 2057 |
| TfiI | GAWTC | 3 cut(s) | 35, 767, 955 |
| Tru1I | TTAA | 2 cut(s) | 861, 1827 |
| Tru9I | TTAA | 2 cut(s) | 861, 1827 |
| TscAI | CASTG | 6 cut(s) | 34, 123, 615, 1056, 1093, 1197 |
| TseFI | GTSAC | 4 cut(s) | 114, 511, 1088, 1210 |
| Tsp45I | GTSAC | 4 cut(s) | 114, 511, 1088, 1210 |
| TspDTI | ATGAA | 1 cut(s) | 739 |
| TspGWI | ACGGA | 2 cut(s) | 84, 1492 |
| TspRI | CASTG | 6 cut(s) | 34, 123, 615, 1056, 1093, 1197 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 159, 591, 1998 |
| VneI | GTGCAC | 1 cut(s) | 485 |
| VpaK11BI | GGWCC | 6 cut(s) | 92, 644, 831, 1012, 1244, 1295 |
| XapI | RAATTY | 2 cut(s) | 73, 540 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 1079, 1115, 1222 |
| XhoI | CTCGAG | 1 cut(s) | 1336 |
| XmiI | GTMKAC | 1 cut(s) | 1454 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1791, 1848 |
| XspI | CTAG | 8 cut(s) | 131, 201, 1263, 1323, 1346, 1812, 1835, 1958 |
| ZraI | GACGTC | 1 cut(s) | 10 |
| ZrmI | AGTACT | 1 cut(s) | 2059 |