No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 640 |
| AccB1I | GGYRCC | 2 cut(s) | 577, 704 |
| AclWI | GGATC | 1 cut(s) | 314 |
| AcoI | YGGCCR | 1 cut(s) | 85 |
| AcuI | CTGAAG | 2 cut(s) | 302, 401 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 49, 382, 531, 556, 592 |
| AgsI | TTSAA | 1 cut(s) | 129 |
| AjnI | CCWGG | 1 cut(s) | 117 |
| AluBI | AGCT | 8 cut(s) | 112, 136, 166, 228, 274, 452, 479, 496 |
| AluI | AGCT | 8 cut(s) | 112, 136, 166, 228, 274, 452, 479, 496 |
| Alw21I | GWGCWC | 2 cut(s) | 114, 168 |
| Alw26I | GTCTC | 1 cut(s) | 601 |
| AlwI | GGATC | 1 cut(s) | 314 |
| AoxI | GGCC | 4 cut(s) | 85, 291, 471, 603 |
| ApeKI | GCWGC | 6 cut(s) | 133, 371, 479, 482, 617, 674 |
| AspLEI | GCGC | 4 cut(s) | 442, 522, 641, 674 |
| AspS9I | GGNCC | 1 cut(s) | 603 |
| AsuC2I | CCSGG | 1 cut(s) | 551 |
| BalI | TGGCCA | 1 cut(s) | 87 |
| BanI | GGYRCC | 2 cut(s) | 577, 704 |
| BanII | GRGCYC | 2 cut(s) | 114, 168 |
| BauI | CACGAG | 1 cut(s) | 107 |
| Bbv12I | GWGCWC | 2 cut(s) | 114, 168 |
| BbvI | GCAGC | 6 cut(s) | 145, 358, 466, 469, 604, 686 |
| BccI | CCATC | 2 cut(s) | 26, 451 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 464, 498 |
| BciT130I | CCWGG | 1 cut(s) | 119 |
| BclI | TGATCA | 1 cut(s) | 541 |
| BcnI | CCSGG | 1 cut(s) | 551 |
| BcoDI | GTCTC | 1 cut(s) | 601 |
| BfaI | CTAG | 3 cut(s) | 203, 260, 600 |
| BfmI | CTRYAG | 1 cut(s) | 56 |
| BisI | GCNGC | 8 cut(s) | 134, 333, 372, 438, 480, 483, 618, 675 |
| BlpI | GCTNAGC | 1 cut(s) | 76 |
| BlsI | GCNGC | 8 cut(s) | 135, 334, 373, 439, 481, 484, 619, 676 |
| Bme1390I | CCNGG | 2 cut(s) | 119, 551 |
| BmgT120I | GGNCC | 1 cut(s) | 603 |
| BmiI | GGNNCC | 3 cut(s) | 579, 647, 706 |
| BmrFI | CCNGG | 2 cut(s) | 119, 551 |
| BmrI | ACTGGG | 1 cut(s) | 580 |
| BmsI | GCATC | 4 cut(s) | 183, 237, 246, 409 |
| BmuI | ACTGGG | 1 cut(s) | 580 |
| Bpu10I | CCTNAGC | 2 cut(s) | 197, 233 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 76 |
| BpuEI | CTTGAG | 1 cut(s) | 158 |
| BpuMI | CCSGG | 1 cut(s) | 551 |
| BsaI | GGTCTC | 1 cut(s) | 601 |
| BsaJI | CCNNGG | 1 cut(s) | 251 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 49, 382, 531, 556, 592 |
| Bse1I | ACTGG | 1 cut(s) | 586 |
| BseBI | CCWGG | 1 cut(s) | 119 |
| BseDI | CCNNGG | 1 cut(s) | 251 |
| BseGI | GGATG | 4 cut(s) | 37, 198, 261, 424 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 49, 382, 531, 556, 592 |
| BseMII | CTCAG | 3 cut(s) | 90, 211, 582 |
| BseNI | ACTGG | 1 cut(s) | 586 |
| BseRI | GAGGAG | 2 cut(s) | 176, 476 |
| BseXI | GCAGC | 6 cut(s) | 145, 358, 466, 469, 604, 686 |
| BseYI | CCCAGC | 1 cut(s) | 13 |
| BshFI | GGCC | 4 cut(s) | 87, 293, 473, 605 |
| BshNI | GGYRCC | 2 cut(s) | 577, 704 |
| BsiHKAI | GWGCWC | 2 cut(s) | 114, 168 |
| BsiSI | CCGG | 3 cut(s) | 158, 525, 551 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 49, 382, 531, 556, 592 |
| BsmAI | GTCTC | 1 cut(s) | 601 |
| BsmI | GAATGC | 1 cut(s) | 247 |
| BsnI | GGCC | 4 cut(s) | 87, 293, 473, 605 |
| Bso31I | GGTCTC | 1 cut(s) | 601 |
| Bsp1286I | GDGCHC | 2 cut(s) | 114, 168 |
| Bsp143I | GATC | 3 cut(s) | 306, 541, 650 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 76 |
| BspANI | GGCC | 4 cut(s) | 87, 293, 473, 605 |
| BspCNI | CTCAG | 3 cut(s) | 89, 210, 583 |
| BspHI | TCATGA | 1 cut(s) | 544 |
| BspLI | GGNNCC | 3 cut(s) | 579, 647, 706 |
| BspPI | GGATC | 1 cut(s) | 314 |
| BspQI | GCTCTTC | 1 cut(s) | 119 |
| BspT107I | GGYRCC | 2 cut(s) | 577, 704 |
| BspTNI | GGTCTC | 1 cut(s) | 601 |
| BsrI | ACTGG | 1 cut(s) | 586 |
| BssECI | CCNNGG | 1 cut(s) | 251 |
| BssMI | GATC | 3 cut(s) | 306, 541, 650 |
| BssSI | CACGAG | 1 cut(s) | 107 |
| BssT1I | CCWWGG | 1 cut(s) | 251 |
| Bst2BI | CACGAG | 1 cut(s) | 107 |
| Bst2UI | CCWGG | 1 cut(s) | 119 |
| Bst4CI | ACNGT | 6 cut(s) | 52, 153, 224, 398, 415, 682 |
| Bst6I | CTCTTC | 2 cut(s) | 119, 347 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 517 |
| BstC8I | GCNNGC | 3 cut(s) | 43, 230, 518 |
| BstDEI | CTNAG | 4 cut(s) | 76, 197, 233, 591 |
| BstF5I | GGATG | 4 cut(s) | 37, 198, 261, 424 |
| BstHHI | GCGC | 4 cut(s) | 442, 522, 641, 674 |
| BstKTI | GATC | 3 cut(s) | 309, 544, 653 |
| BstMAI | GTCTC | 1 cut(s) | 601 |
| BstMBI | GATC | 3 cut(s) | 306, 541, 650 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 163, 208, 225, 256, 280, 341, 479, 517, 683 |
| BstNI | CCWGG | 1 cut(s) | 119 |
| BstNSI | RCATGY | 1 cut(s) | 520 |
| BstSCI | CCNGG | 2 cut(s) | 117, 549 |
| BstSFI | CTRYAG | 1 cut(s) | 56 |
| BstV1I | GCAGC | 6 cut(s) | 145, 358, 466, 469, 604, 686 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 613 |
| BsuRI | GGCC | 4 cut(s) | 87, 293, 473, 605 |
| BtgZI | GCGATG | 1 cut(s) | 260 |
| BtsCI | GGATG | 4 cut(s) | 37, 198, 261, 424 |
| BtsI | GCAGTG | 2 cut(s) | 535, 572 |
| BtsIMutI | CAGTG | 3 cut(s) | 411, 535, 572 |
| Cac8I | GCNNGC | 3 cut(s) | 43, 230, 518 |
| CciI | TCATGA | 1 cut(s) | 544 |
| CfoI | GCGC | 4 cut(s) | 442, 522, 641, 674 |
| Cfr13I | GGNCC | 1 cut(s) | 603 |
| CviAII | CATG | 4 cut(s) | 512, 517, 545, 642 |
| DdeI | CTNAG | 4 cut(s) | 76, 197, 233, 591 |
| DpnI | GATC | 3 cut(s) | 308, 543, 652 |
| DpnII | GATC | 3 cut(s) | 306, 541, 650 |
| EaeI | YGGCCR | 1 cut(s) | 85 |
| Eam1104I | CTCTTC | 2 cut(s) | 119, 347 |
| EarI | CTCTTC | 2 cut(s) | 119, 347 |
| EciI | GGCGGA | 3 cut(s) | 253, 401, 569 |
| Ecl136II | GAGCTC | 2 cut(s) | 112, 166 |
| Eco130I | CCWWGG | 1 cut(s) | 251 |
| Eco24I | GRGCYC | 2 cut(s) | 114, 168 |
| Eco31I | GGTCTC | 1 cut(s) | 601 |
| Eco53kI | GAGCTC | 2 cut(s) | 112, 166 |
| Eco57I | CTGAAG | 2 cut(s) | 302, 401 |
| EcoICRI | GAGCTC | 2 cut(s) | 112, 166 |
| EcoRII | CCWGG | 1 cut(s) | 117 |
| EcoT14I | CCWWGG | 1 cut(s) | 251 |
| EcoT38I | GRGCYC | 2 cut(s) | 114, 168 |
| ErhI | CCWWGG | 1 cut(s) | 251 |
| FaeI | CATG | 4 cut(s) | 515, 520, 548, 645 |
| FaiI | YATR | 9 cut(s) | 90, 92, 266, 513, 518, 546, 624, 643, 666 |
| FatI | CATG | 4 cut(s) | 511, 516, 544, 641 |
| FauI | CCCGC | 2 cut(s) | 50, 171 |
| FauNDI | CATATG | 1 cut(s) | 90 |
| FbaI | TGATCA | 1 cut(s) | 541 |
| Fnu4HI | GCNGC | 8 cut(s) | 134, 333, 372, 438, 480, 483, 618, 675 |
| FokI | GGATG | 4 cut(s) | 44, 205, 268, 431 |
| FriOI | GRGCYC | 2 cut(s) | 114, 168 |
| Fsp4HI | GCNGC | 8 cut(s) | 134, 333, 372, 438, 480, 483, 618, 675 |
| FspBI | CTAG | 3 cut(s) | 203, 260, 600 |
| FspI | TGCGCA | 1 cut(s) | 640 |
| GlaI | GCGC | 4 cut(s) | 441, 521, 640, 673 |
| GluI | GCNGC | 8 cut(s) | 134, 333, 372, 438, 480, 483, 618, 675 |
| GsaI | CCCAGC | 1 cut(s) | 17 |
| HaeIII | GGCC | 4 cut(s) | 87, 293, 473, 605 |
| HapII | CCGG | 3 cut(s) | 158, 525, 551 |
| HhaI | GCGC | 4 cut(s) | 442, 522, 641, 674 |
| Hin1II | CATG | 4 cut(s) | 515, 520, 548, 645 |
| Hin6I | GCGC | 4 cut(s) | 440, 520, 639, 672 |
| HinP1I | GCGC | 4 cut(s) | 440, 520, 639, 672 |
| HindIII | AAGCTT | 1 cut(s) | 450 |
| HinfI | GANTC | 5 cut(s) | 18, 36, 326, 431, 560 |
| HpaII | CCGG | 3 cut(s) | 158, 525, 551 |
| Hpy166II | GTNNAC | 1 cut(s) | 570 |
| Hpy188I | TCNGA | 4 cut(s) | 321, 592, 650, 655 |
| Hpy188III | TCNNGA | 1 cut(s) | 545 |
| Hpy8I | GTNNAC | 1 cut(s) | 570 |
| Hpy99I | CGWCG | 2 cut(s) | 101, 686 |
| HpyAV | CCTTC | 2 cut(s) | 376, 463 |
| HpyCH4III | ACNGT | 6 cut(s) | 52, 153, 224, 398, 415, 682 |
| HpyCH4IV | ACGT | 1 cut(s) | 489 |
| HpyCH4V | TGCA | 2 cut(s) | 106, 404 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 163, 208, 225, 256, 280, 341, 479, 517, 683 |
| HpyF3I | CTNAG | 4 cut(s) | 76, 197, 233, 591 |
| HpySE526I | ACGT | 1 cut(s) | 489 |
| Hsp92II | CATG | 4 cut(s) | 515, 520, 548, 645 |
| HspAI | GCGC | 4 cut(s) | 440, 520, 639, 672 |
| Ksp22I | TGATCA | 1 cut(s) | 541 |
| Kzo9I | GATC | 3 cut(s) | 306, 541, 650 |
| LguI | GCTCTTC | 1 cut(s) | 119 |
| LmnI | GCTCC | 3 cut(s) | 163, 527, 651 |
| Lsp1109I | GCAGC | 6 cut(s) | 145, 358, 466, 469, 604, 686 |
| LweI | GCATC | 4 cut(s) | 183, 237, 246, 409 |
| MaeI | CTAG | 3 cut(s) | 203, 260, 600 |
| MaeII | ACGT | 1 cut(s) | 489 |
| MalI | GATC | 3 cut(s) | 308, 543, 652 |
| MboI | GATC | 3 cut(s) | 306, 541, 650 |
| MboII | GAAGA | 3 cut(s) | 106, 308, 364 |
| MhlI | GDGCHC | 2 cut(s) | 114, 168 |
| MlsI | TGGCCA | 1 cut(s) | 87 |
| MluCI | AATT | 1 cut(s) | 712 |
| MluNI | TGGCCA | 1 cut(s) | 87 |
| MlyI | GAGTC | 3 cut(s) | 320, 440, 554 |
| Mox20I | TGGCCA | 1 cut(s) | 87 |
| MscI | TGGCCA | 1 cut(s) | 87 |
| MseI | TTAA | 1 cut(s) | 300 |
| Msp20I | TGGCCA | 1 cut(s) | 87 |
| MspA1I | CMGCKG | 1 cut(s) | 274 |
| MspI | CCGG | 3 cut(s) | 158, 525, 551 |
| MspR9I | CCNGG | 2 cut(s) | 119, 551 |
| Mva1269I | GAATGC | 1 cut(s) | 247 |
| MvaI | CCWGG | 1 cut(s) | 119 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 163, 208, 225, 256, 280, 341, 479, 517, 683 |
| NciI | CCSGG | 1 cut(s) | 551 |
| NdeI | CATATG | 1 cut(s) | 90 |
| NdeII | GATC | 3 cut(s) | 306, 541, 650 |
| NlaIII | CATG | 4 cut(s) | 515, 520, 548, 645 |
| NlaIV | GGNNCC | 3 cut(s) | 579, 647, 706 |
| NmeAIII | GCCGAG | 1 cut(s) | 712 |
| NsbI | TGCGCA | 1 cut(s) | 640 |
| NspI | RCATGY | 1 cut(s) | 520 |
| PaeI | GCATGC | 1 cut(s) | 520 |
| PagI | TCATGA | 1 cut(s) | 544 |
| PciSI | GCTCTTC | 1 cut(s) | 119 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 105 |
| PctI | GAATGC | 1 cut(s) | 247 |
| PfeI | GAWTC | 2 cut(s) | 18, 36 |
| PkrI | GCNGC | 8 cut(s) | 135, 334, 373, 439, 481, 484, 619, 676 |
| PleI | GAGTC | 3 cut(s) | 320, 439, 554 |
| PpsI | GAGTC | 3 cut(s) | 320, 439, 554 |
| Psp124BI | GAGCTC | 2 cut(s) | 114, 168 |
| Psp6I | CCWGG | 1 cut(s) | 117 |
| PspFI | CCCAGC | 1 cut(s) | 13 |
| PspGI | CCWGG | 1 cut(s) | 117 |
| PspN4I | GGNNCC | 3 cut(s) | 579, 647, 706 |
| PspPI | GGNCC | 1 cut(s) | 603 |
| PvuII | CAGCTG | 1 cut(s) | 274 |
| SacI | GAGCTC | 2 cut(s) | 114, 168 |
| SapI | GCTCTTC | 1 cut(s) | 119 |
| SaqAI | TTAA | 1 cut(s) | 300 |
| SatI | GCNGC | 8 cut(s) | 134, 333, 372, 438, 480, 483, 618, 675 |
| Sau3AI | GATC | 3 cut(s) | 306, 541, 650 |
| Sau96I | GGNCC | 1 cut(s) | 603 |
| SchI | GAGTC | 3 cut(s) | 320, 440, 554 |
| ScrFI | CCNGG | 2 cut(s) | 119, 551 |
| SduI | GDGCHC | 2 cut(s) | 114, 168 |
| SfaNI | GCATC | 4 cut(s) | 183, 237, 246, 409 |
| SfcI | CTRYAG | 1 cut(s) | 56 |
| SmlI | CTYRAG | 1 cut(s) | 137 |
| SmoI | CTYRAG | 1 cut(s) | 137 |
| SphI | GCATGC | 1 cut(s) | 520 |
| Sse9I | AATT | 1 cut(s) | 712 |
| SspMI | CTAG | 3 cut(s) | 203, 260, 600 |
| SstI | GAGCTC | 2 cut(s) | 114, 168 |
| StyD4I | CCNGG | 2 cut(s) | 117, 549 |
| StyI | CCWWGG | 1 cut(s) | 251 |
| TaaI | ACNGT | 6 cut(s) | 52, 153, 224, 398, 415, 682 |
| TaiI | ACGT | 1 cut(s) | 492 |
| TaqI | TCGA | 3 cut(s) | 144, 168, 309 |
| TasI | AATT | 1 cut(s) | 712 |
| TauI | GCSGC | 2 cut(s) | 335, 440 |
| TfiI | GAWTC | 2 cut(s) | 18, 36 |
| Tru1I | TTAA | 1 cut(s) | 300 |
| Tru9I | TTAA | 1 cut(s) | 300 |
| TscAI | CASTG | 3 cut(s) | 418, 535, 572 |
| TseI | GCWGC | 6 cut(s) | 133, 371, 479, 482, 617, 674 |
| TspDTI | ATGAA | 1 cut(s) | 365 |
| TspRI | CASTG | 3 cut(s) | 418, 535, 572 |
| XceI | RCATGY | 1 cut(s) | 520 |
| XspI | CTAG | 3 cut(s) | 203, 260, 600 |