No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2341 |
| Acc65I | GGTACC | 1 cut(s) | 1312 |
| AccB1I | GGYRCC | 7 cut(s) | 335, 523, 1223, 1312, 2204, 2297, 2420 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 159, 541, 588 |
| AccBSI | CCGCTC | 5 cut(s) | 884, 1606, 1912, 1975, 2304 |
| AccI | GTMKAC | 2 cut(s) | 345, 2126 |
| AclWI | GGATC | 3 cut(s) | 941, 1086, 1667 |
| AcoI | YGGCCR | 5 cut(s) | 477, 1854, 1902, 2097, 2247 |
| AcsI | RAATTY | 1 cut(s) | 551 |
| AcuI | CTGAAG | 4 cut(s) | 2063, 2100, 2213, 2514 |
| AcyI | GRCGYC | 4 cut(s) | 452, 1881, 2205, 2298 |
| AfaI | GTAC | 4 cut(s) | 683, 896, 1314, 2257 |
| AflIII | ACRYGT | 3 cut(s) | 585, 1734, 1933 |
| AgsI | TTSAA | 5 cut(s) | 768, 1028, 1247, 1793, 2119 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2436 |
| AjnI | CCWGG | 8 cut(s) | 327, 540, 693, 1036, 1101, 1143, 1161, 2027 |
| AleI | CACNNNNGTG | 1 cut(s) | 1626 |
| Alw21I | GWGCWC | 2 cut(s) | 200, 1779 |
| Alw26I | GTCTC | 6 cut(s) | 779, 1100, 1151, 1832, 1942, 2423 |
| AlwI | GGATC | 3 cut(s) | 941, 1086, 1667 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 942, 1295, 1762 |
| Ama87I | CYCGRG | 1 cut(s) | 2409 |
| ApaI | GGGCCC | 2 cut(s) | 1486, 2173 |
| ApoI | RAATTY | 1 cut(s) | 551 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 660 |
| Asp718I | GGTACC | 1 cut(s) | 1312 |
| AsuC2I | CCSGG | 5 cut(s) | 40, 411, 1486, 2410, 2411 |
| AsuHPI | GGTGA | 6 cut(s) | 221, 430, 1159, 1408, 1613, 2044 |
| AsuII | TTCGAA | 1 cut(s) | 1065 |
| AvaI | CYCGRG | 1 cut(s) | 2409 |
| AvaII | GGWCC | 3 cut(s) | 182, 2343, 2454 |
| AxyI | CCTNAGG | 1 cut(s) | 2072 |
| BaeGI | GKGCMC | 2 cut(s) | 1486, 2173 |
| BalI | TGGCCA | 2 cut(s) | 1856, 1904 |
| BanI | GGYRCC | 7 cut(s) | 335, 523, 1223, 1312, 2204, 2297, 2420 |
| BanII | GRGCYC | 5 cut(s) | 200, 416, 1486, 1779, 2173 |
| BbsI | GAAGAC | 1 cut(s) | 1145 |
| Bbv12I | GWGCWC | 2 cut(s) | 200, 1779 |
| BccI | CCATC | 9 cut(s) | 326, 1069, 1223, 1224, 1512, 1592, 1913, 2216, 2377 |
| BceAI | ACGGC | 4 cut(s) | 326, 464, 711, 2434 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 325, 359 |
| BciT130I | CCWGG | 8 cut(s) | 329, 542, 695, 1038, 1103, 1145, 1163, 2029 |
| BciVI | GTATCC | 1 cut(s) | 2080 |
| BcnI | CCSGG | 5 cut(s) | 40, 411, 1486, 2410, 2411 |
| BcoDI | GTCTC | 6 cut(s) | 779, 1100, 1151, 1832, 1942, 2423 |
| BfaI | CTAG | 8 cut(s) | 131, 201, 231, 1361, 1637, 1652, 2174, 2396 |
| BfmI | CTRYAG | 3 cut(s) | 146, 1693, 1967 |
| BfoI | RGCGCY | 6 cut(s) | 694, 740, 1415, 1547, 2208, 2301 |
| BfuI | GTATCC | 1 cut(s) | 2080 |
| Bme18I | GGWCC | 3 cut(s) | 182, 2343, 2454 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2436 |
| BmeT110I | CYCGRG | 1 cut(s) | 2409 |
| BmrI | ACTGGG | 1 cut(s) | 458 |
| BmsI | GCATC | 4 cut(s) | 100, 1413, 2227, 2494 |
| BmuI | ACTGGG | 1 cut(s) | 458 |
| BpiI | GAAGAC | 1 cut(s) | 1145 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 498, 530 |
| BpmI | CTGGAG | 3 cut(s) | 311, 1124, 1784 |
| Bpu10I | CCTNAGC | 4 cut(s) | 719, 1778, 1986, 2305 |
| Bpu14I | TTCGAA | 1 cut(s) | 1065 |
| BpuMI | CCSGG | 5 cut(s) | 40, 411, 1486, 2410, 2411 |
| BsaAI | YACGTR | 1 cut(s) | 685 |
| BsaHI | GRCGYC | 4 cut(s) | 452, 1881, 2205, 2298 |
| BsaI | GGTCTC | 3 cut(s) | 779, 1151, 2423 |
| BsaWI | WCCGGW | 1 cut(s) | 402 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1097, 1127 |
| Bse118I | RCCGGY | 3 cut(s) | 1393, 1428, 2245 |
| Bse1I | ACTGG | 5 cut(s) | 267, 464, 782, 1174, 1554 |
| Bse21I | CCTNAGG | 1 cut(s) | 2072 |
| Bse3DI | GCAATG | 1 cut(s) | 612 |
| BseBI | CCWGG | 8 cut(s) | 329, 542, 695, 1038, 1103, 1145, 1163, 2029 |
| BseGI | GGATG | 8 cut(s) | 91, 337, 369, 448, 1428, 1471, 1603, 1960 |
| BseMI | GCAATG | 1 cut(s) | 612 |
| BseMII | CTCAG | 8 cut(s) | 70, 300, 710, 881, 1146, 1792, 2063, 2319 |
| BseNI | ACTGG | 5 cut(s) | 267, 464, 782, 1174, 1554 |
| BseRI | GAGGAG | 4 cut(s) | 926, 929, 1400, 1799 |
| BseSI | GKGCMC | 2 cut(s) | 1486, 2173 |
| BseX3I | CGGCCG | 2 cut(s) | 477, 2097 |
| BseYI | CCCAGC | 9 cut(s) | 278, 824, 987, 1250, 1721, 2165, 2259, 2287, 2346 |
| BsgI | GTGCAG | 3 cut(s) | 721, 1373, 2030 |
| Bsh1285I | CGRYCG | 3 cut(s) | 480, 2100, 2478 |
| BshNI | GGYRCC | 7 cut(s) | 335, 523, 1223, 1312, 2204, 2297, 2420 |
| BsiEI | CGRYCG | 3 cut(s) | 480, 2100, 2478 |
| BsiHKAI | GWGCWC | 2 cut(s) | 200, 1779 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2409 |
| BsiSI | CCGG | 9 cut(s) | 39, 403, 410, 1394, 1429, 1486, 2246, 2264, 2410 |
| BslFI | GGGAC | 3 cut(s) | 900, 1928, 2329 |
| BsmAI | GTCTC | 6 cut(s) | 779, 1100, 1151, 1832, 1942, 2423 |
| BsmBI | CGTCTC | 1 cut(s) | 1100 |
| BsmFI | GGGAC | 3 cut(s) | 900, 1928, 2329 |
| BsmI | GAATGC | 1 cut(s) | 2114 |
| Bso31I | GGTCTC | 3 cut(s) | 779, 1151, 2423 |
| BsoBI | CYCGRG | 1 cut(s) | 2409 |
| Bsp119I | TTCGAA | 1 cut(s) | 1065 |
| Bsp120I | GGGCCC | 2 cut(s) | 1482, 2169 |
| Bsp1286I | GDGCHC | 5 cut(s) | 200, 416, 1486, 1779, 2173 |
| Bsp143I | GATC | 6 cut(s) | 747, 933, 1078, 1659, 2458, 2475 |
| BspCNI | CTCAG | 8 cut(s) | 69, 301, 711, 882, 1147, 1791, 2064, 2318 |
| BspMAI | CTGCAG | 1 cut(s) | 1971 |
| BspPI | GGATC | 3 cut(s) | 941, 1086, 1667 |
| BspT104I | TTCGAA | 1 cut(s) | 1065 |
| BspT107I | GGYRCC | 7 cut(s) | 335, 523, 1223, 1312, 2204, 2297, 2420 |
| BspTNI | GGTCTC | 3 cut(s) | 779, 1151, 2423 |
| BsrBI | CCGCTC | 5 cut(s) | 884, 1606, 1912, 1975, 2304 |
| BsrDI | GCAATG | 1 cut(s) | 612 |
| BsrFI | RCCGGY | 3 cut(s) | 1393, 1428, 2245 |
| BsrI | ACTGG | 5 cut(s) | 267, 464, 782, 1174, 1554 |
| BssAI | RCCGGY | 3 cut(s) | 1393, 1428, 2245 |
| BssMI | GATC | 6 cut(s) | 747, 933, 1078, 1659, 2458, 2475 |
| BssNI | GRCGYC | 4 cut(s) | 452, 1881, 2205, 2298 |
| BssT1I | CCWWGG | 4 cut(s) | 158, 502, 1379, 1857 |
| Bst2UI | CCWGG | 8 cut(s) | 329, 542, 695, 1038, 1103, 1145, 1163, 2029 |
| Bst4CI | ACNGT | 2 cut(s) | 618, 649 |
| Bst6I | CTCTTC | 2 cut(s) | 1449, 1622 |
| BstACI | GRCGYC | 4 cut(s) | 452, 1881, 2205, 2298 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2504 |
| BstBAI | YACGTR | 1 cut(s) | 685 |
| BstBI | TTCGAA | 1 cut(s) | 1065 |
| BstDSI | CCRYGG | 3 cut(s) | 1260, 1885, 2094 |
| BstF5I | GGATG | 8 cut(s) | 91, 337, 369, 448, 1428, 1471, 1603, 1960 |
| BstH2I | RGCGCY | 6 cut(s) | 694, 740, 1415, 1547, 2208, 2301 |
| BstKTI | GATC | 6 cut(s) | 750, 936, 1081, 1662, 2461, 2478 |
| BstMAI | GTCTC | 6 cut(s) | 779, 1100, 1151, 1832, 1942, 2423 |
| BstMBI | GATC | 6 cut(s) | 747, 933, 1078, 1659, 2458, 2475 |
| BstMCI | CGRYCG | 3 cut(s) | 480, 2100, 2478 |
| BstNI | CCWGG | 8 cut(s) | 329, 542, 695, 1038, 1103, 1145, 1163, 2029 |
| BstNSI | RCATGY | 3 cut(s) | 589, 1738, 2191 |
| BstSFI | CTRYAG | 3 cut(s) | 146, 1693, 1967 |
| BstSLI | GKGCMC | 2 cut(s) | 1486, 2173 |
| BstV2I | GAAGAC | 1 cut(s) | 1145 |
| BstX2I | RGATCY | 1 cut(s) | 1659 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1561 |
| BstYI | RGATCY | 1 cut(s) | 1659 |
| BstZI | CGGCCG | 2 cut(s) | 477, 2097 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2072 |
| BsuI | GTATCC | 1 cut(s) | 2080 |
| BtgI | CCRYGG | 3 cut(s) | 1260, 1885, 2094 |
| BtgZI | GCGATG | 2 cut(s) | 1088, 2159 |
| BtsCI | GGATG | 8 cut(s) | 91, 337, 369, 448, 1428, 1471, 1603, 1960 |
| BtsI | GCAGTG | 3 cut(s) | 34, 116, 2317 |
| BtsIMutI | CAGTG | 8 cut(s) | 34, 64, 116, 274, 471, 614, 1561, 2317 |
| CaiI | CAGNNNCTG | 3 cut(s) | 942, 1295, 1762 |
| CciNI | GCGGCCGC | 1 cut(s) | 2097 |
| Cfr10I | RCCGGY | 3 cut(s) | 1393, 1428, 2245 |
| Cfr42I | CCGCGG | 2 cut(s) | 1888, 2097 |
| Cfr9I | CCCGGG | 1 cut(s) | 2409 |
| CseI | GACGC | 7 cut(s) | 176, 416, 441, 784, 1067, 1889, 2214 |
| Csp6I | GTAC | 4 cut(s) | 682, 895, 1313, 2256 |
| CviAII | CATG | 6 cut(s) | 104, 485, 586, 1730, 1735, 2188 |
| CviQI | GTAC | 4 cut(s) | 682, 895, 1313, 2256 |
| DinI | GGCGCC | 2 cut(s) | 2206, 2299 |
| DpnI | GATC | 6 cut(s) | 749, 935, 1080, 1661, 2460, 2477 |
| DpnII | GATC | 6 cut(s) | 747, 933, 1078, 1659, 2458, 2475 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2341 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2436 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2341 |
| EaeI | YGGCCR | 5 cut(s) | 477, 1854, 1902, 2097, 2247 |
| EagI | CGGCCG | 2 cut(s) | 477, 2097 |
| Eam1104I | CTCTTC | 2 cut(s) | 1449, 1622 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2436 |
| EarI | CTCTTC | 2 cut(s) | 1449, 1622 |
| Ecl136II | GAGCTC | 2 cut(s) | 198, 1777 |
| EclXI | CGGCCG | 2 cut(s) | 477, 2097 |
| Eco130I | CCWWGG | 4 cut(s) | 158, 502, 1379, 1857 |
| Eco24I | GRGCYC | 5 cut(s) | 200, 416, 1486, 1779, 2173 |
| Eco31I | GGTCTC | 3 cut(s) | 779, 1151, 2423 |
| Eco47I | GGWCC | 3 cut(s) | 182, 2343, 2454 |
| Eco52I | CGGCCG | 2 cut(s) | 477, 2097 |
| Eco53kI | GAGCTC | 2 cut(s) | 198, 1777 |
| Eco57I | CTGAAG | 4 cut(s) | 2063, 2100, 2213, 2514 |
| Eco81I | CCTNAGG | 1 cut(s) | 2072 |
| Eco88I | CYCGRG | 1 cut(s) | 2409 |
| EcoICRI | GAGCTC | 2 cut(s) | 198, 1777 |
| EcoO109I | RGGNCCY | 5 cut(s) | 641, 1482, 2169, 2170, 2343 |
| EcoRII | CCWGG | 8 cut(s) | 327, 540, 693, 1036, 1101, 1143, 1161, 2027 |
| EcoT14I | CCWWGG | 4 cut(s) | 158, 502, 1379, 1857 |
| EcoT38I | GRGCYC | 5 cut(s) | 200, 416, 1486, 1779, 2173 |
| EgeI | GGCGCC | 2 cut(s) | 2206, 2299 |
| EheI | GGCGCC | 2 cut(s) | 2206, 2299 |
| ErhI | CCWWGG | 4 cut(s) | 158, 502, 1379, 1857 |
| Esp3I | CGTCTC | 1 cut(s) | 1100 |
| FaeI | CATG | 6 cut(s) | 107, 488, 589, 1733, 1738, 2191 |
| FaqI | GGGAC | 3 cut(s) | 900, 1928, 2329 |
| FatI | CATG | 6 cut(s) | 103, 484, 585, 1729, 1734, 2187 |
| FblI | GTMKAC | 2 cut(s) | 345, 2126 |
| FokI | GGATG | 8 cut(s) | 78, 344, 376, 455, 1435, 1478, 1610, 1967 |
| FriOI | GRGCYC | 5 cut(s) | 200, 416, 1486, 1779, 2173 |
| FspBI | CTAG | 8 cut(s) | 131, 201, 231, 1361, 1637, 1652, 2174, 2396 |
| GsaI | CCCAGC | 9 cut(s) | 282, 828, 991, 1254, 1725, 2169, 2263, 2291, 2350 |
| GsuI | CTGGAG | 3 cut(s) | 311, 1124, 1784 |
| HaeII | RGCGCY | 6 cut(s) | 694, 740, 1415, 1547, 2208, 2301 |
| HapII | CCGG | 9 cut(s) | 39, 403, 410, 1394, 1429, 1486, 2246, 2264, 2410 |
| HgaI | GACGC | 7 cut(s) | 176, 416, 441, 784, 1067, 1889, 2214 |
| Hin1I | GRCGYC | 4 cut(s) | 452, 1881, 2205, 2298 |
| Hin1II | CATG | 6 cut(s) | 107, 488, 589, 1733, 1738, 2191 |
| HincII | GTYRAC | 2 cut(s) | 346, 2127 |
| HindII | GTYRAC | 2 cut(s) | 346, 2127 |
| HpaII | CCGG | 9 cut(s) | 39, 403, 410, 1394, 1429, 1486, 2246, 2264, 2410 |
| HphI | GGTGA | 6 cut(s) | 221, 430, 1159, 1408, 1613, 2044 |
| Hpy166II | GTNNAC | 7 cut(s) | 346, 431, 682, 715, 1534, 1590, 2127 |
| Hpy188III | TCNNGA | 4 cut(s) | 191, 751, 1154, 1801 |
| Hpy8I | GTNNAC | 7 cut(s) | 346, 431, 682, 715, 1534, 1590, 2127 |
| HpyCH4III | ACNGT | 2 cut(s) | 618, 649 |
| HpyCH4IV | ACGT | 8 cut(s) | 9, 113, 398, 684, 848, 905, 1899, 1933 |
| HpyCH4V | TGCA | 8 cut(s) | 91, 107, 484, 702, 1354, 1729, 1969, 2011 |
| HpySE526I | ACGT | 8 cut(s) | 9, 113, 398, 684, 848, 905, 1899, 1933 |
| Hsp92I | GRCGYC | 4 cut(s) | 452, 1881, 2205, 2298 |
| Hsp92II | CATG | 6 cut(s) | 107, 488, 589, 1733, 1738, 2191 |
| KasI | GGCGCC | 2 cut(s) | 2204, 2297 |
| KflI | GGGWCCC | 1 cut(s) | 2343 |
| KpnI | GGTACC | 1 cut(s) | 1316 |
| KroI | GCCGGC | 2 cut(s) | 1428, 2245 |
| KroNI | GCCGGC | 2 cut(s) | 1430, 2247 |
| KspI | CCGCGG | 2 cut(s) | 1888, 2097 |
| Kzo9I | GATC | 6 cut(s) | 747, 933, 1078, 1659, 2458, 2475 |
| LmnI | GCTCC | 9 cut(s) | 278, 734, 1025, 1387, 1774, 1807, 1948, 1972, 2038 |
| LweI | GCATC | 4 cut(s) | 100, 1413, 2227, 2494 |
| MaeI | CTAG | 8 cut(s) | 131, 201, 231, 1361, 1637, 1652, 2174, 2396 |
| MaeII | ACGT | 8 cut(s) | 9, 113, 398, 684, 848, 905, 1899, 1933 |
| MaeIII | GTNAC | 7 cut(s) | 114, 379, 508, 1556, 1868, 2032, 2226 |
| MalI | GATC | 6 cut(s) | 749, 935, 1080, 1661, 2460, 2477 |
| MbiI | CCGCTC | 5 cut(s) | 884, 1606, 1912, 1975, 2304 |
| MboI | GATC | 6 cut(s) | 747, 933, 1078, 1659, 2458, 2475 |
| MboII | GAAGA | 8 cut(s) | 296, 299, 1150, 1466, 1507, 1609, 1762, 2513 |
| MflI | RGATCY | 1 cut(s) | 1659 |
| MhlI | GDGCHC | 5 cut(s) | 200, 416, 1486, 1779, 2173 |
| MlsI | TGGCCA | 2 cut(s) | 1856, 1904 |
| MluCI | AATT | 1 cut(s) | 551 |
| MluNI | TGGCCA | 2 cut(s) | 1856, 1904 |
| Mly113I | GGCGCC | 2 cut(s) | 2205, 2298 |
| MlyI | GAGTC | 6 cut(s) | 320, 1559, 2027, 2162, 2347, 2476 |
| MmeI | TCCRAC | 4 cut(s) | 843, 895, 1926, 2465 |
| Mox20I | TGGCCA | 2 cut(s) | 1856, 1904 |
| MroNI | GCCGGC | 2 cut(s) | 1428, 2245 |
| MroXI | GAANNNNTTC | 1 cut(s) | 660 |
| MscI | TGGCCA | 2 cut(s) | 1856, 1904 |
| MseI | TTAA | 2 cut(s) | 858, 2136 |
| MslI | CAYNNNNRTG | 5 cut(s) | 386, 1221, 1626, 2006, 2186 |
| Msp20I | TGGCCA | 2 cut(s) | 1856, 1904 |
| MspI | CCGG | 9 cut(s) | 39, 403, 410, 1394, 1429, 1486, 2246, 2264, 2410 |
| Mva1269I | GAATGC | 1 cut(s) | 2114 |
| MvaI | CCWGG | 8 cut(s) | 329, 542, 695, 1038, 1103, 1145, 1163, 2029 |
| NaeI | GCCGGC | 2 cut(s) | 1430, 2247 |
| NarI | GGCGCC | 2 cut(s) | 2205, 2298 |
| NciI | CCSGG | 5 cut(s) | 40, 411, 1486, 2410, 2411 |
| NdeII | GATC | 6 cut(s) | 747, 933, 1078, 1659, 2458, 2475 |
| NgoMIV | GCCGGC | 2 cut(s) | 1428, 2245 |
| NlaIII | CATG | 6 cut(s) | 107, 488, 589, 1733, 1738, 2191 |
| NmuCI | GTSAC | 7 cut(s) | 114, 379, 508, 1556, 1868, 2032, 2226 |
| NotI | GCGGCCGC | 1 cut(s) | 2097 |
| NspI | RCATGY | 3 cut(s) | 589, 1738, 2191 |
| NspV | TTCGAA | 1 cut(s) | 1065 |
| OliI | CACNNNNGTG | 1 cut(s) | 1626 |
| PciI | ACATGT | 2 cut(s) | 585, 1734 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 92, 184, 1905, 2471 |
| PctI | GAATGC | 1 cut(s) | 2114 |
| PdiI | GCCGGC | 2 cut(s) | 1430, 2247 |
| PdmI | GAANNNNTTC | 1 cut(s) | 660 |
| PfeI | GAWTC | 9 cut(s) | 35, 83, 457, 754, 764, 1150, 1439, 1978, 2391 |
| PflFI | GACNNNGTC | 2 cut(s) | 2152, 2216 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 159, 541, 588 |
| PfoI | TCCNGGA | 2 cut(s) | 327, 1101 |
| Ple19I | CGATCG | 1 cut(s) | 2478 |
| PleI | GAGTC | 6 cut(s) | 319, 1559, 2026, 2161, 2347, 2475 |
| PluTI | GGCGCC | 2 cut(s) | 2208, 2301 |
| PpsI | GAGTC | 6 cut(s) | 319, 1559, 2026, 2161, 2347, 2475 |
| Ppu21I | YACGTR | 1 cut(s) | 685 |
| PpuMI | RGGWCCY | 1 cut(s) | 2343 |
| PscI | ACATGT | 2 cut(s) | 585, 1734 |
| Psp124BI | GAGCTC | 2 cut(s) | 200, 1779 |
| Psp5II | RGGWCCY | 1 cut(s) | 2343 |
| Psp6I | CCWGG | 8 cut(s) | 327, 540, 693, 1036, 1101, 1143, 1161, 2027 |
| PspFI | CCCAGC | 9 cut(s) | 278, 824, 987, 1250, 1721, 2165, 2259, 2287, 2346 |
| PspGI | CCWGG | 8 cut(s) | 327, 540, 693, 1036, 1101, 1143, 1161, 2027 |
| PspOMI | GGGCCC | 2 cut(s) | 1482, 2169 |
| PspPPI | RGGWCCY | 1 cut(s) | 2343 |
| PstI | CTGCAG | 1 cut(s) | 1971 |
| PstNI | CAGNNNCTG | 3 cut(s) | 942, 1295, 1762 |
| PsuI | RGATCY | 1 cut(s) | 1659 |
| PsyI | GACNNNGTC | 2 cut(s) | 2152, 2216 |
| PvuI | CGATCG | 1 cut(s) | 2478 |
| PvuII | CAGCTG | 1 cut(s) | 1721 |
| RsaI | GTAC | 4 cut(s) | 683, 896, 1314, 2257 |
| RsaNI | GTAC | 4 cut(s) | 682, 895, 1313, 2256 |
| RseI | CAYNNNNRTG | 5 cut(s) | 386, 1221, 1626, 2006, 2186 |
| SacI | GAGCTC | 2 cut(s) | 200, 1779 |
| SacII | CCGCGG | 2 cut(s) | 1888, 2097 |
| SalI | GTCGAC | 2 cut(s) | 344, 2125 |
| SaqAI | TTAA | 2 cut(s) | 858, 2136 |
| Sau3AI | GATC | 6 cut(s) | 747, 933, 1078, 1659, 2458, 2475 |
| SchI | GAGTC | 6 cut(s) | 320, 1559, 2027, 2162, 2347, 2476 |
| SduI | GDGCHC | 5 cut(s) | 200, 416, 1486, 1779, 2173 |
| SfaNI | GCATC | 4 cut(s) | 100, 1413, 2227, 2494 |
| SfcI | CTRYAG | 3 cut(s) | 146, 1693, 1967 |
| SfoI | GGCGCC | 2 cut(s) | 2206, 2299 |
| Sfr303I | CCGCGG | 2 cut(s) | 1888, 2097 |
| SfuI | TTCGAA | 1 cut(s) | 1065 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1393 |
| SgrBI | CCGCGG | 2 cut(s) | 1888, 2097 |
| SgrDI | CGTCGACG | 1 cut(s) | 344 |
| SinI | GGWCC | 3 cut(s) | 182, 2343, 2454 |
| SmaI | CCCGGG | 1 cut(s) | 2411 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 386, 1221, 1626, 2006, 2186 |
| Sse9I | AATT | 1 cut(s) | 551 |
| SspDI | GGCGCC | 2 cut(s) | 2204, 2297 |
| SspMI | CTAG | 8 cut(s) | 131, 201, 231, 1361, 1637, 1652, 2174, 2396 |
| SstI | GAGCTC | 2 cut(s) | 200, 1779 |
| StyI | CCWWGG | 4 cut(s) | 158, 502, 1379, 1857 |
| TaaI | ACNGT | 2 cut(s) | 618, 649 |
| TaiI | ACGT | 8 cut(s) | 12, 116, 401, 687, 851, 908, 1902, 1936 |
| TaqII | GACCGA | 2 cut(s) | 557, 2165 |
| TasI | AATT | 1 cut(s) | 551 |
| TfiI | GAWTC | 9 cut(s) | 35, 83, 457, 754, 764, 1150, 1439, 1978, 2391 |
| Tru1I | TTAA | 2 cut(s) | 858, 2136 |
| Tru9I | TTAA | 2 cut(s) | 858, 2136 |
| TscAI | CASTG | 8 cut(s) | 34, 64, 123, 274, 471, 621, 1561, 2317 |
| TseFI | GTSAC | 7 cut(s) | 114, 379, 508, 1556, 1868, 2032, 2226 |
| Tsp45I | GTSAC | 7 cut(s) | 114, 379, 508, 1556, 1868, 2032, 2226 |
| TspDTI | ATGAA | 4 cut(s) | 380, 404, 623, 1944 |
| TspGWI | ACGGA | 7 cut(s) | 84, 452, 1012, 1610, 2051, 2144, 2351 |
| TspMI | CCCGGG | 1 cut(s) | 2409 |
| TspRI | CASTG | 8 cut(s) | 34, 64, 123, 274, 471, 621, 1561, 2317 |
| Tth111I | GACNNNGTC | 2 cut(s) | 2152, 2216 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 159, 541, 588 |
| VpaK11BI | GGWCC | 3 cut(s) | 182, 2343, 2454 |
| XapI | RAATTY | 1 cut(s) | 551 |
| XceI | RCATGY | 3 cut(s) | 589, 1738, 2191 |
| XmaI | CCCGGG | 1 cut(s) | 2409 |
| XmiI | GTMKAC | 2 cut(s) | 345, 2126 |
| XmnI | GAANNNNTTC | 1 cut(s) | 660 |
| XspI | CTAG | 8 cut(s) | 131, 201, 231, 1361, 1637, 1652, 2174, 2396 |