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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 409 |
| Acc36I | ACCTGC | 1 cut(s) | 409 |
| AccB1I | GGYRCC | 2 cut(s) | 37, 1271 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 748, 1281 |
| AccBSI | CCGCTC | 1 cut(s) | 991 |
| AccI | GTMKAC | 1 cut(s) | 193 |
| AccII | CGCG | 2 cut(s) | 199, 226 |
| AclWI | GGATC | 4 cut(s) | 258, 1047, 1066, 1292 |
| AcoI | YGGCCR | 1 cut(s) | 1242 |
| AcsI | RAATTY | 3 cut(s) | 55, 167, 698 |
| AcuI | CTGAAG | 3 cut(s) | 1055, 1061, 1280 |
| AcyI | GRCGYC | 1 cut(s) | 1272 |
| AfaI | GTAC | 2 cut(s) | 119, 442 |
| AfeI | AGCGCT | 2 cut(s) | 492, 1212 |
| AgeI | ACCGGT | 1 cut(s) | 300 |
| AgsI | TTSAA | 3 cut(s) | 61, 706, 1186 |
| AjiI | CACGTC | 2 cut(s) | 985, 1003 |
| AjnI | CCWGG | 1 cut(s) | 482 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 261, 293, 339, 371 |
| AluBI | AGCT | 7 cut(s) | 46, 506, 745, 810, 961, 1103, 1255 |
| AluI | AGCT | 7 cut(s) | 46, 506, 745, 810, 961, 1103, 1255 |
| Alw21I | GWGCWC | 2 cut(s) | 528, 780 |
| Alw26I | GTCTC | 4 cut(s) | 578, 869, 1009, 1299 |
| Alw44I | GTGCAC | 2 cut(s) | 524, 776 |
| AlwI | GGATC | 4 cut(s) | 258, 1047, 1066, 1292 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 748 |
| Aor51HI | AGCGCT | 2 cut(s) | 492, 1212 |
| AoxI | GGCC | 7 cut(s) | 202, 394, 621, 650, 813, 885, 1242 |
| ApaLI | GTGCAC | 2 cut(s) | 524, 776 |
| ApeKI | GCWGC | 9 cut(s) | 4, 449, 460, 503, 745, 1103, 1232, 1235, 1255 |
| ApoI | RAATTY | 3 cut(s) | 55, 167, 698 |
| AsiGI | ACCGGT | 1 cut(s) | 300 |
| AspA2I | CCTAGG | 1 cut(s) | 391 |
| AspLEI | GCGC | 7 cut(s) | 210, 226, 454, 493, 915, 1213, 1274 |
| AspS9I | GGNCC | 6 cut(s) | 87, 202, 395, 595, 622, 650 |
| AsuHPI | GGTGA | 6 cut(s) | 66, 646, 961, 1060, 1069, 1120 |
| AvaII | GGWCC | 2 cut(s) | 87, 595 |
| AvrII | CCTAGG | 1 cut(s) | 391 |
| AxyI | CCTNAGG | 2 cut(s) | 654, 714 |
| BaeGI | GKGCMC | 3 cut(s) | 42, 528, 780 |
| BalI | TGGCCA | 1 cut(s) | 1244 |
| BanI | GGYRCC | 2 cut(s) | 37, 1271 |
| Bbv12I | GWGCWC | 2 cut(s) | 528, 780 |
| BbvI | GCAGC | 9 cut(s) | 16, 436, 472, 515, 732, 1090, 1219, 1222, 1242 |
| BccI | CCATC | 4 cut(s) | 101, 105, 110, 841 |
| BceAI | ACGGC | 2 cut(s) | 418, 970 |
| BciT130I | CCWGG | 1 cut(s) | 484 |
| BcoDI | GTCTC | 4 cut(s) | 578, 869, 1009, 1299 |
| BfaI | CTAG | 2 cut(s) | 336, 392 |
| BfmI | CTRYAG | 3 cut(s) | 211, 805, 1089 |
| BfoI | RGCGCY | 4 cut(s) | 494, 916, 1214, 1275 |
| BfuAI | ACCTGC | 1 cut(s) | 409 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 402 |
| BglII | AGATCT | 1 cut(s) | 284 |
| BlnI | CCTAGG | 1 cut(s) | 391 |
| Bme1390I | CCNGG | 1 cut(s) | 484 |
| Bme18I | GGWCC | 2 cut(s) | 87, 595 |
| BmgBI | CACGTC | 2 cut(s) | 985, 1003 |
| BmgT120I | GGNCC | 6 cut(s) | 87, 202, 395, 595, 622, 650 |
| BmrFI | CCNGG | 1 cut(s) | 484 |
| BmrI | ACTGGG | 1 cut(s) | 1148 |
| BmsI | GCATC | 5 cut(s) | 388, 465, 528, 895, 937 |
| BmuI | ACTGGG | 1 cut(s) | 1148 |
| BpmI | CTGGAG | 4 cut(s) | 851, 991, 1034, 1139 |
| Bsa29I | ATCGAT | 1 cut(s) | 105 |
| BsaHI | GRCGYC | 1 cut(s) | 1272 |
| BsaI | GGTCTC | 2 cut(s) | 578, 869 |
| BsaJI | CCNNGG | 8 cut(s) | 77, 197, 360, 391, 483, 529, 888, 952 |
| BsaWI | WCCGGW | 1 cut(s) | 300 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 989, 1019 |
| Bse118I | RCCGGY | 1 cut(s) | 300 |
| Bse1I | ACTGG | 4 cut(s) | 455, 1017, 1143, 1286 |
| Bse21I | CCTNAGG | 2 cut(s) | 654, 714 |
| BseBI | CCWGG | 1 cut(s) | 484 |
| BseCI | ATCGAT | 1 cut(s) | 105 |
| BseDI | CCNNGG | 8 cut(s) | 77, 197, 360, 391, 483, 529, 888, 952 |
| BseGI | GGATG | 5 cut(s) | 116, 480, 571, 910, 1129 |
| BseMII | CTCAG | 5 cut(s) | 12, 342, 645, 705, 1209 |
| BseNI | ACTGG | 4 cut(s) | 455, 1017, 1143, 1286 |
| BseRI | GAGGAG | 2 cut(s) | 866, 1160 |
| BseSI | GKGCMC | 3 cut(s) | 42, 528, 780 |
| BseXI | GCAGC | 9 cut(s) | 16, 436, 472, 515, 732, 1090, 1219, 1222, 1242 |
| BseYI | CCCAGC | 2 cut(s) | 647, 748 |
| BsgI | GTGCAG | 3 cut(s) | 437, 479, 680 |
| Bsh1236I | CGCG | 2 cut(s) | 199, 226 |
| BshFI | GGCC | 7 cut(s) | 204, 396, 623, 652, 815, 887, 1244 |
| BshNI | GGYRCC | 2 cut(s) | 37, 1271 |
| BshTI | ACCGGT | 1 cut(s) | 300 |
| BshVI | ATCGAT | 1 cut(s) | 105 |
| BsiHKAI | GWGCWC | 2 cut(s) | 528, 780 |
| BsiSI | CCGG | 1 cut(s) | 301 |
| BslFI | GGGAC | 2 cut(s) | 100, 995 |
| BsmAI | GTCTC | 4 cut(s) | 578, 869, 1009, 1299 |
| BsmBI | CGTCTC | 1 cut(s) | 1009 |
| BsmFI | GGGAC | 2 cut(s) | 100, 995 |
| BsmI | GAATGC | 2 cut(s) | 139, 226 |
| BsnI | GGCC | 7 cut(s) | 204, 396, 623, 652, 815, 887, 1244 |
| Bso31I | GGTCTC | 2 cut(s) | 578, 869 |
| Bsp1286I | GDGCHC | 3 cut(s) | 42, 528, 780 |
| Bsp143I | GATC | 8 cut(s) | 250, 284, 320, 555, 642, 1039, 1071, 1284 |
| BspANI | GGCC | 7 cut(s) | 204, 396, 623, 652, 815, 887, 1244 |
| BspCNI | CTCAG | 5 cut(s) | 13, 343, 646, 706, 1210 |
| BspDI | ATCGAT | 1 cut(s) | 105 |
| BspFNI | CGCG | 2 cut(s) | 199, 226 |
| BspMAI | CTGCAG | 1 cut(s) | 1093 |
| BspMI | ACCTGC | 1 cut(s) | 409 |
| BspPI | GGATC | 4 cut(s) | 258, 1047, 1066, 1292 |
| BspT107I | GGYRCC | 2 cut(s) | 37, 1271 |
| BspTNI | GGTCTC | 2 cut(s) | 578, 869 |
| BsrBI | CCGCTC | 1 cut(s) | 991 |
| BsrFI | RCCGGY | 1 cut(s) | 300 |
| BsrI | ACTGG | 4 cut(s) | 455, 1017, 1143, 1286 |
| BssAI | RCCGGY | 1 cut(s) | 300 |
| BssECI | CCNNGG | 8 cut(s) | 77, 197, 360, 391, 483, 529, 888, 952 |
| BssMI | GATC | 8 cut(s) | 250, 284, 320, 555, 642, 1039, 1071, 1284 |
| BssNI | GRCGYC | 1 cut(s) | 1272 |
| BssT1I | CCWWGG | 4 cut(s) | 77, 391, 529, 888 |
| Bst2UI | CCWGG | 1 cut(s) | 484 |
| Bst4CI | ACNGT | 1 cut(s) | 973 |
| Bst6I | CTCTTC | 2 cut(s) | 226, 1106 |
| BstACI | GRCGYC | 1 cut(s) | 1272 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 37, 1232 |
| BstC8I | GCNNGC | 9 cut(s) | 206, 264, 407, 480, 602, 621, 743, 761, 959 |
| BstDEI | CTNAG | 5 cut(s) | 21, 351, 654, 714, 1218 |
| BstDSI | CCRYGG | 3 cut(s) | 197, 360, 952 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 923, 1034 |
| BstF5I | GGATG | 5 cut(s) | 116, 480, 571, 910, 1129 |
| BstFNI | CGCG | 2 cut(s) | 199, 226 |
| BstH2I | RGCGCY | 4 cut(s) | 494, 916, 1214, 1275 |
| BstHHI | GCGC | 7 cut(s) | 210, 226, 454, 493, 915, 1213, 1274 |
| BstKTI | GATC | 8 cut(s) | 253, 287, 323, 558, 645, 1042, 1074, 1287 |
| BstMAI | GTCTC | 4 cut(s) | 578, 869, 1009, 1299 |
| BstMBI | GATC | 8 cut(s) | 250, 284, 320, 555, 642, 1039, 1071, 1284 |
| BstNI | CCWGG | 1 cut(s) | 484 |
| BstSCI | CCNGG | 1 cut(s) | 482 |
| BstSFI | CTRYAG | 3 cut(s) | 211, 805, 1089 |
| BstSLI | GKGCMC | 3 cut(s) | 42, 528, 780 |
| BstUI | CGCG | 2 cut(s) | 199, 226 |
| BstV1I | GCAGC | 9 cut(s) | 16, 436, 472, 515, 732, 1090, 1219, 1222, 1242 |
| BstX2I | RGATCY | 3 cut(s) | 250, 284, 1071 |
| BstYI | RGATCY | 3 cut(s) | 250, 284, 1071 |
| Bsu15I | ATCGAT | 1 cut(s) | 105 |
| Bsu36I | CCTNAGG | 2 cut(s) | 654, 714 |
| BsuRI | GGCC | 7 cut(s) | 204, 396, 623, 652, 815, 887, 1244 |
| BsuTUI | ATCGAT | 1 cut(s) | 105 |
| BtgI | CCRYGG | 3 cut(s) | 197, 360, 952 |
| BtrI | CACGTC | 2 cut(s) | 985, 1003 |
| BtsCI | GGATG | 5 cut(s) | 116, 480, 571, 910, 1129 |
| BtsI | GCAGTG | 1 cut(s) | 1098 |
| BtsIMutI | CAGTG | 2 cut(s) | 462, 1098 |
| BveI | ACCTGC | 1 cut(s) | 409 |
| Cac8I | GCNNGC | 9 cut(s) | 206, 264, 407, 480, 602, 621, 743, 761, 959 |
| CaiI | CAGNNNCTG | 1 cut(s) | 748 |
| CfoI | GCGC | 7 cut(s) | 210, 226, 454, 493, 915, 1213, 1274 |
| Cfr10I | RCCGGY | 1 cut(s) | 300 |
| Cfr13I | GGNCC | 6 cut(s) | 87, 202, 395, 595, 622, 650 |
| Cfr42I | CCGCGG | 1 cut(s) | 200 |
| ClaI | ATCGAT | 1 cut(s) | 105 |
| Csp6I | GTAC | 2 cut(s) | 118, 441 |
| CspAI | ACCGGT | 1 cut(s) | 300 |
| CviAII | CATG | 2 cut(s) | 70, 842 |
| CviQI | GTAC | 2 cut(s) | 118, 441 |
| DdeI | CTNAG | 5 cut(s) | 21, 351, 654, 714, 1218 |
| DinI | GGCGCC | 1 cut(s) | 1273 |
| DpnI | GATC | 8 cut(s) | 252, 286, 322, 557, 644, 1041, 1073, 1286 |
| DpnII | GATC | 8 cut(s) | 250, 284, 320, 555, 642, 1039, 1071, 1284 |
| EaeI | YGGCCR | 1 cut(s) | 1242 |
| Eam1104I | CTCTTC | 2 cut(s) | 226, 1106 |
| EarI | CTCTTC | 2 cut(s) | 226, 1106 |
| EciI | GGCGGA | 5 cut(s) | 447, 587, 896, 917, 1211 |
| Eco130I | CCWWGG | 4 cut(s) | 77, 391, 529, 888 |
| Eco31I | GGTCTC | 2 cut(s) | 578, 869 |
| Eco47I | GGWCC | 2 cut(s) | 87, 595 |
| Eco47III | AGCGCT | 2 cut(s) | 492, 1212 |
| Eco57I | CTGAAG | 3 cut(s) | 1055, 1061, 1280 |
| Eco81I | CCTNAGG | 2 cut(s) | 654, 714 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 923, 1034 |
| EcoO109I | RGGNCCY | 4 cut(s) | 87, 202, 395, 622 |
| EcoRI | GAATTC | 1 cut(s) | 698 |
| EcoRII | CCWGG | 1 cut(s) | 482 |
| EcoT14I | CCWWGG | 4 cut(s) | 77, 391, 529, 888 |
| EgeI | GGCGCC | 1 cut(s) | 1273 |
| EheI | GGCGCC | 1 cut(s) | 1273 |
| ErhI | CCWWGG | 4 cut(s) | 77, 391, 529, 888 |
| Esp3I | CGTCTC | 1 cut(s) | 1009 |
| FaeI | CATG | 2 cut(s) | 73, 845 |
| FaiI | YATR | 7 cut(s) | 71, 213, 691, 693, 843, 1203, 1241 |
| FaqI | GGGAC | 2 cut(s) | 100, 995 |
| FatI | CATG | 2 cut(s) | 69, 841 |
| FauI | CCCGC | 6 cut(s) | 75, 118, 130, 192, 249, 752 |
| FauNDI | CATATG | 1 cut(s) | 691 |
| FblI | GTMKAC | 1 cut(s) | 193 |
| FokI | GGATG | 5 cut(s) | 123, 487, 578, 917, 1136 |
| FspBI | CTAG | 2 cut(s) | 336, 392 |
| GlaI | GCGC | 7 cut(s) | 209, 225, 453, 492, 914, 1212, 1273 |
| GsaI | CCCAGC | 2 cut(s) | 651, 752 |
| GsuI | CTGGAG | 4 cut(s) | 851, 991, 1034, 1139 |
| HaeII | RGCGCY | 4 cut(s) | 494, 916, 1214, 1275 |
| HaeIII | GGCC | 7 cut(s) | 204, 396, 623, 652, 815, 887, 1244 |
| HapII | CCGG | 1 cut(s) | 301 |
| HhaI | GCGC | 7 cut(s) | 210, 226, 454, 493, 915, 1213, 1274 |
| Hin1I | GRCGYC | 1 cut(s) | 1272 |
| Hin1II | CATG | 2 cut(s) | 73, 845 |
| Hin6I | GCGC | 7 cut(s) | 208, 224, 452, 491, 913, 1211, 1272 |
| HinP1I | GCGC | 7 cut(s) | 208, 224, 452, 491, 913, 1211, 1272 |
| HincII | GTYRAC | 1 cut(s) | 331 |
| HindII | GTYRAC | 1 cut(s) | 331 |
| HinfI | GANTC | 7 cut(s) | 17, 23, 65, 677, 771, 1085, 1153 |
| HpaII | CCGG | 1 cut(s) | 301 |
| HphI | GGTGA | 6 cut(s) | 66, 646, 961, 1060, 1069, 1120 |
| Hpy166II | GTNNAC | 4 cut(s) | 194, 331, 526, 778 |
| Hpy188I | TCNGA | 2 cut(s) | 22, 352 |
| Hpy188III | TCNNGA | 6 cut(s) | 154, 703, 868, 919, 1008, 1288 |
| Hpy8I | GTNNAC | 4 cut(s) | 194, 331, 526, 778 |
| Hpy99I | CGWCG | 6 cut(s) | 231, 404, 503, 563, 631, 977 |
| HpyCH4III | ACNGT | 1 cut(s) | 973 |
| HpyCH4IV | ACGT | 4 cut(s) | 183, 984, 1002, 1248 |
| HpyCH4V | TGCA | 7 cut(s) | 4, 418, 460, 526, 661, 778, 1091 |
| HpyF3I | CTNAG | 5 cut(s) | 21, 351, 654, 714, 1218 |
| HpySE526I | ACGT | 4 cut(s) | 183, 984, 1002, 1248 |
| Hsp92I | GRCGYC | 1 cut(s) | 1272 |
| Hsp92II | CATG | 2 cut(s) | 73, 845 |
| HspAI | GCGC | 7 cut(s) | 208, 224, 452, 491, 913, 1211, 1272 |
| KasI | GGCGCC | 1 cut(s) | 1271 |
| KspI | CCGCGG | 1 cut(s) | 200 |
| Kzo9I | GATC | 8 cut(s) | 250, 284, 320, 555, 642, 1039, 1071, 1284 |
| LmnI | GCTCC | 8 cut(s) | 142, 488, 498, 709, 910, 988, 1015, 1252 |
| Lsp1109I | GCAGC | 9 cut(s) | 16, 436, 472, 515, 732, 1090, 1219, 1222, 1242 |
| LweI | GCATC | 5 cut(s) | 388, 465, 528, 895, 937 |
| MaeI | CTAG | 2 cut(s) | 336, 392 |
| MaeII | ACGT | 4 cut(s) | 183, 984, 1002, 1248 |
| MaeIII | GTNAC | 6 cut(s) | 72, 511, 634, 967, 1048, 1129 |
| MalI | GATC | 8 cut(s) | 252, 286, 322, 557, 644, 1041, 1073, 1286 |
| MbiI | CCGCTC | 1 cut(s) | 991 |
| MboI | GATC | 8 cut(s) | 250, 284, 320, 555, 642, 1039, 1071, 1284 |
| MboII | GAAGA | 5 cut(s) | 243, 619, 721, 1072, 1123 |
| MflI | RGATCY | 3 cut(s) | 250, 284, 1071 |
| MhlI | GDGCHC | 3 cut(s) | 42, 528, 780 |
| MlsI | TGGCCA | 1 cut(s) | 1244 |
| MluCI | AATT | 4 cut(s) | 55, 167, 275, 698 |
| MluNI | TGGCCA | 1 cut(s) | 1244 |
| Mly113I | GGCGCC | 1 cut(s) | 1272 |
| MlyI | GAGTC | 2 cut(s) | 32, 671 |
| MmeI | TCCRAC | 1 cut(s) | 196 |
| Mox20I | TGGCCA | 1 cut(s) | 1244 |
| MscI | TGGCCA | 1 cut(s) | 1244 |
| MseI | TTAA | 1 cut(s) | 159 |
| MslI | CAYNNNNRTG | 1 cut(s) | 783 |
| Msp20I | TGGCCA | 1 cut(s) | 1244 |
| MspA1I | CMGCKG | 5 cut(s) | 199, 506, 745, 944, 1172 |
| MspI | CCGG | 1 cut(s) | 301 |
| MspR9I | CCNGG | 1 cut(s) | 484 |
| Mva1269I | GAATGC | 2 cut(s) | 139, 226 |
| MvaI | CCWGG | 1 cut(s) | 484 |
| MvnI | CGCG | 2 cut(s) | 199, 226 |
| NarI | GGCGCC | 1 cut(s) | 1272 |
| NdeI | CATATG | 1 cut(s) | 691 |
| NdeII | GATC | 8 cut(s) | 250, 284, 320, 555, 642, 1039, 1071, 1284 |
| NlaIII | CATG | 2 cut(s) | 73, 845 |
| NmeAIII | GCCGAG | 1 cut(s) | 791 |
| NmuCI | GTSAC | 5 cut(s) | 72, 511, 634, 967, 1048 |
| PaqCI | CACCTGC | 1 cut(s) | 409 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 408, 555, 981 |
| PctI | GAATGC | 2 cut(s) | 139, 226 |
| PfeI | GAWTC | 5 cut(s) | 17, 65, 771, 1085, 1153 |
| PflFI | GACNNNGTC | 1 cut(s) | 1001 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 748, 1281 |
| PinAI | ACCGGT | 1 cut(s) | 300 |
| PleI | GAGTC | 2 cut(s) | 31, 671 |
| PluTI | GGCGCC | 1 cut(s) | 1275 |
| PpsI | GAGTC | 2 cut(s) | 31, 671 |
| PpuMI | RGGWCCY | 1 cut(s) | 87 |
| Psp5II | RGGWCCY | 1 cut(s) | 87 |
| Psp6I | CCWGG | 1 cut(s) | 482 |
| PspFI | CCCAGC | 2 cut(s) | 647, 748 |
| PspGI | CCWGG | 1 cut(s) | 482 |
| PspPI | GGNCC | 6 cut(s) | 87, 202, 395, 595, 622, 650 |
| PspPPI | RGGWCCY | 1 cut(s) | 87 |
| PstI | CTGCAG | 1 cut(s) | 1093 |
| PstNI | CAGNNNCTG | 1 cut(s) | 748 |
| PsuI | RGATCY | 3 cut(s) | 250, 284, 1071 |
| PsyI | GACNNNGTC | 1 cut(s) | 1001 |
| PvuII | CAGCTG | 2 cut(s) | 506, 745 |
| RsaI | GTAC | 2 cut(s) | 119, 442 |
| RsaNI | GTAC | 2 cut(s) | 118, 441 |
| RseI | CAYNNNNRTG | 1 cut(s) | 783 |
| SacII | CCGCGG | 1 cut(s) | 200 |
| SaqAI | TTAA | 1 cut(s) | 159 |
| Sau3AI | GATC | 8 cut(s) | 250, 284, 320, 555, 642, 1039, 1071, 1284 |
| Sau96I | GGNCC | 6 cut(s) | 87, 202, 395, 595, 622, 650 |
| SchI | GAGTC | 2 cut(s) | 32, 671 |
| ScrFI | CCNGG | 1 cut(s) | 484 |
| SduI | GDGCHC | 3 cut(s) | 42, 528, 780 |
| SfaNI | GCATC | 5 cut(s) | 388, 465, 528, 895, 937 |
| SfcI | CTRYAG | 3 cut(s) | 211, 805, 1089 |
| SfoI | GGCGCC | 1 cut(s) | 1273 |
| Sfr303I | CCGCGG | 1 cut(s) | 200 |
| SgrBI | CCGCGG | 1 cut(s) | 200 |
| SinI | GGWCC | 2 cut(s) | 87, 595 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 783 |
| Sse9I | AATT | 4 cut(s) | 55, 167, 275, 698 |
| SspDI | GGCGCC | 1 cut(s) | 1271 |
| SspMI | CTAG | 2 cut(s) | 336, 392 |
| StyD4I | CCNGG | 1 cut(s) | 482 |
| StyI | CCWWGG | 4 cut(s) | 77, 391, 529, 888 |
| TaaI | ACNGT | 1 cut(s) | 973 |
| TaiI | ACGT | 4 cut(s) | 186, 987, 1005, 1251 |
| TaqII | GACCGA | 1 cut(s) | 179 |
| TasI | AATT | 4 cut(s) | 55, 167, 275, 698 |
| TauI | GCSGC | 5 cut(s) | 31, 379, 944, 1172, 1226 |
| TfiI | GAWTC | 5 cut(s) | 17, 65, 771, 1085, 1153 |
| Tru1I | TTAA | 1 cut(s) | 159 |
| Tru9I | TTAA | 1 cut(s) | 159 |
| TscAI | CASTG | 2 cut(s) | 462, 1098 |
| TseFI | GTSAC | 5 cut(s) | 72, 511, 634, 967, 1048 |
| TseI | GCWGC | 9 cut(s) | 4, 449, 460, 503, 745, 1103, 1232, 1235, 1255 |
| Tsp45I | GTSAC | 5 cut(s) | 72, 511, 634, 967, 1048 |
| TspDTI | ATGAA | 2 cut(s) | 30, 715 |
| TspRI | CASTG | 2 cut(s) | 462, 1098 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1001 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 748, 1281 |
| VneI | GTGCAC | 2 cut(s) | 524, 776 |
| VpaK11BI | GGWCC | 2 cut(s) | 87, 595 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 923, 1034 |
| XapI | RAATTY | 3 cut(s) | 55, 167, 698 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 895 |
| XmaJI | CCTAGG | 1 cut(s) | 391 |
| XmiI | GTMKAC | 1 cut(s) | 193 |
| XspI | CTAG | 2 cut(s) | 336, 392 |