ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 2537, 4510 |
| AatII | GACGTC | 2 cut(s) | 1398, 4128 |
| Acc65I | GGTACC | 1 cut(s) | 3508 |
| AccB1I | GGYRCC | 6 cut(s) | 2719, 3419, 3508, 3739, 4466, 4589 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 312, 2355, 2737, 2784 |
| AccBSI | CCGCTC | 6 cut(s) | 283, 3080, 3802, 4081, 4144, 4473 |
| AccI | GTMKAC | 2 cut(s) | 212, 2541 |
| AccIII | TCCGGA | 1 cut(s) | 1548 |
| AclWI | GGATC | 9 cut(s) | 12, 375, 642, 1155, 1318, 1344, 3137, 3282, 3863 |
| AcoI | YGGCCR | 6 cut(s) | 1975, 2673, 4023, 4071, 4266, 4416 |
| AcsI | RAATTY | 4 cut(s) | 194, 1103, 1762, 2747 |
| AcuI | CTGAAG | 4 cut(s) | 2100, 4232, 4269, 4382 |
| AcvI | CACGTG | 1 cut(s) | 1926 |
| AcyI | GRCGYC | 8 cut(s) | 1395, 1734, 2028, 2648, 3740, 4050, 4125, 4467 |
| AfaI | GTAC | 9 cut(s) | 145, 272, 472, 536, 899, 2879, 3092, 3510, 4426 |
| AflIII | ACRYGT | 5 cut(s) | 1923, 1925, 2781, 3903, 4102 |
| AgeI | ACCGGT | 2 cut(s) | 20, 1009 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 4605 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 438, 470 |
| AleI | CACNNNNGTG | 2 cut(s) | 490, 4199 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 2036, 2068, 2096, 2128 |
| Alw21I | GWGCWC | 2 cut(s) | 2157, 3948 |
| Alw44I | GTGCAC | 1 cut(s) | 2153 |
| AlwI | GGATC | 9 cut(s) | 12, 375, 642, 1155, 1318, 1344, 3137, 3282, 3863 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 3138, 3491, 3931 |
| Ama87I | CYCGRG | 4 cut(s) | 42, 1664, 3350, 4578 |
| Aor13HI | TCCGGA | 1 cut(s) | 1548 |
| ApaI | GGGCCC | 2 cut(s) | 3682, 4342 |
| ApaLI | GTGCAC | 1 cut(s) | 2153 |
| ApoI | RAATTY | 4 cut(s) | 194, 1103, 1762, 2747 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 221, 253 |
| AsiGI | ACCGGT | 2 cut(s) | 20, 1009 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1115, 2856 |
| Asp718I | GGTACC | 1 cut(s) | 3508 |
| AspA2I | CCTAGG | 1 cut(s) | 170 |
| AsuC2I | CCSGG | 8 cut(s) | 1532, 2021, 2236, 2607, 2827, 3682, 4579, 4580 |
| AsuII | TTCGAA | 2 cut(s) | 1879, 3261 |
| AsuNHI | GCTAGC | 1 cut(s) | 1769 |
| AvaI | CYCGRG | 4 cut(s) | 42, 1664, 3350, 4578 |
| AvaII | GGWCC | 9 cut(s) | 289, 1070, 1219, 2378, 2982, 3934, 4084, 4512, 4623 |
| AvrII | CCTAGG | 1 cut(s) | 170 |
| AxyI | CCTNAGG | 1 cut(s) | 4241 |
| BaeGI | GKGCMC | 4 cut(s) | 178, 2157, 3682, 4342 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2146, 2179 |
| BalI | TGGCCA | 2 cut(s) | 4025, 4073 |
| BanI | GGYRCC | 6 cut(s) | 2719, 3419, 3508, 3739, 4466, 4589 |
| BanII | GRGCYC | 4 cut(s) | 1067, 3682, 3948, 4342 |
| BbrPI | CACGTG | 1 cut(s) | 1926 |
| BbsI | GAAGAC | 6 cut(s) | 565, 1414, 1737, 1973, 3341, 4013 |
| Bbv12I | GWGCWC | 2 cut(s) | 2157, 3948 |
| BceAI | ACGGC | 9 cut(s) | 1495, 1659, 1962, 2522, 2558, 2649, 2660, 2907, 4603 |
| BciVI | GTATCC | 1 cut(s) | 4249 |
| BclI | TGATCA | 1 cut(s) | 72 |
| BcnI | CCSGG | 8 cut(s) | 1532, 2021, 2236, 2607, 2827, 3682, 4579, 4580 |
| BfmI | CTRYAG | 1 cut(s) | 2342 |
| BfoI | RGCGCY | 6 cut(s) | 16, 2890, 2936, 3625, 3743, 4470 |
| BfuI | GTATCC | 1 cut(s) | 4249 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1474 |
| BlnI | CCTAGG | 1 cut(s) | 170 |
| BlpI | GCTNAGC | 2 cut(s) | 1784, 1845 |
| BmcAI | AGTACT | 2 cut(s) | 145, 899 |
| Bme18I | GGWCC | 9 cut(s) | 289, 1070, 1219, 2378, 2982, 3934, 4084, 4512, 4623 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 4605 |
| BmeT110I | CYCGRG | 4 cut(s) | 42, 1664, 3350, 4578 |
| BmrI | ACTGGG | 1 cut(s) | 2654 |
| BmsI | GCATC | 6 cut(s) | 336, 583, 1425, 1455, 4396, 4663 |
| BmtI | GCTAGC | 1 cut(s) | 1773 |
| BmuI | ACTGGG | 1 cut(s) | 2654 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1926 |
| BpiI | GAAGAC | 6 cut(s) | 565, 1414, 1737, 1973, 3341, 4013 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2694, 2726 |
| BpmI | CTGGAG | 6 cut(s) | 1529, 2138, 2507, 3320, 3953, 4109 |
| Bpu10I | CCTNAGC | 4 cut(s) | 2915, 3947, 4155, 4474 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1784, 1845 |
| Bpu14I | TTCGAA | 2 cut(s) | 1879, 3261 |
| BpuEI | CTTGAG | 1 cut(s) | 743 |
| BpuMI | CCSGG | 8 cut(s) | 1532, 2021, 2236, 2607, 2827, 3682, 4579, 4580 |
| Bsa29I | ATCGAT | 1 cut(s) | 1339 |
| BsaAI | YACGTR | 2 cut(s) | 1926, 2881 |
| BsaBI | GATNNNNATC | 1 cut(s) | 366 |
| BsaHI | GRCGYC | 8 cut(s) | 1395, 1734, 2028, 2648, 3740, 4050, 4125, 4467 |
| BsaI | GGTCTC | 5 cut(s) | 72, 762, 1399, 3347, 4592 |
| BsaWI | WCCGGW | 6 cut(s) | 20, 435, 967, 1009, 1548, 2598 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1396, 1426, 3293, 3323 |
| Bse118I | RCCGGY | 5 cut(s) | 20, 1009, 3589, 3624, 4414 |
| Bse1I | ACTGG | 8 cut(s) | 301, 514, 1447, 2660, 2978, 3184, 3370, 3750 |
| Bse21I | CCTNAGG | 1 cut(s) | 4241 |
| Bse3DI | GCAATG | 3 cut(s) | 192, 2808, 4486 |
| Bse8I | GATNNNNATC | 1 cut(s) | 366 |
| BseAI | TCCGGA | 1 cut(s) | 1548 |
| BseCI | ATCGAT | 1 cut(s) | 1339 |
| BseJI | GATNNNNATC | 1 cut(s) | 366 |
| BseMI | GCAATG | 3 cut(s) | 192, 2808, 4486 |
| BseMII | CTCAG | 8 cut(s) | 912, 1798, 1859, 2496, 2906, 3961, 4232, 4488 |
| BseNI | ACTGG | 8 cut(s) | 301, 514, 1447, 2660, 2978, 3184, 3370, 3750 |
| BseRI | GAGGAG | 4 cut(s) | 3122, 3125, 3596, 3968 |
| BseSI | GKGCMC | 4 cut(s) | 178, 2157, 3682, 4342 |
| BseX3I | CGGCCG | 2 cut(s) | 2673, 4266 |
| BseYI | CCCAGC | 8 cut(s) | 1737, 2474, 3020, 3183, 3446, 3890, 4334, 4456 |
| BsgI | GTGCAG | 4 cut(s) | 72, 3569, 3881, 4199 |
| Bsh1285I | CGRYCG | 6 cut(s) | 1641, 2132, 2440, 2676, 4269, 4647 |
| BshNI | GGYRCC | 6 cut(s) | 2719, 3419, 3508, 3739, 4466, 4589 |
| BshTI | ACCGGT | 2 cut(s) | 20, 1009 |
| BshVI | ATCGAT | 1 cut(s) | 1339 |
| BsiEI | CGRYCG | 6 cut(s) | 1641, 2132, 2440, 2676, 4269, 4647 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2157, 3948 |
| BsiHKCI | CYCGRG | 4 cut(s) | 42, 1664, 3350, 4578 |
| BsmBI | CGTCTC | 3 cut(s) | 3296, 3980, 4111 |
| BsmI | GAATGC | 2 cut(s) | 997, 2506 |
| Bso31I | GGTCTC | 5 cut(s) | 72, 762, 1399, 3347, 4592 |
| BsoBI | CYCGRG | 4 cut(s) | 42, 1664, 3350, 4578 |
| Bsp119I | TTCGAA | 2 cut(s) | 1879, 3261 |
| Bsp120I | GGGCCC | 2 cut(s) | 3678, 4338 |
| Bsp1286I | GDGCHC | 6 cut(s) | 178, 1067, 2157, 3682, 3948, 4342 |
| Bsp13I | TCCGGA | 1 cut(s) | 1548 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1784, 1845 |
| BspCNI | CTCAG | 8 cut(s) | 913, 1797, 1858, 2497, 2907, 3960, 4233, 4487 |
| BspDI | ATCGAT | 1 cut(s) | 1339 |
| BspEI | TCCGGA | 1 cut(s) | 1548 |
| BspOI | GCTAGC | 1 cut(s) | 1773 |
| BspPI | GGATC | 9 cut(s) | 12, 375, 642, 1155, 1318, 1344, 3137, 3282, 3863 |
| BspQI | GCTCTTC | 1 cut(s) | 790 |
| BspT104I | TTCGAA | 2 cut(s) | 1879, 3261 |
| BspT107I | GGYRCC | 6 cut(s) | 2719, 3419, 3508, 3739, 4466, 4589 |
| BspTNI | GGTCTC | 5 cut(s) | 72, 762, 1399, 3347, 4592 |
| BsrBI | CCGCTC | 6 cut(s) | 283, 3080, 3802, 4081, 4144, 4473 |
| BsrDI | GCAATG | 3 cut(s) | 192, 2808, 4486 |
| BsrFI | RCCGGY | 5 cut(s) | 20, 1009, 3589, 3624, 4414 |
| BsrI | ACTGG | 8 cut(s) | 301, 514, 1447, 2660, 2978, 3184, 3370, 3750 |
| BssAI | RCCGGY | 5 cut(s) | 20, 1009, 3589, 3624, 4414 |
| BssNI | GRCGYC | 8 cut(s) | 1395, 1734, 2028, 2648, 3740, 4050, 4125, 4467 |
| BssT1I | CCWWGG | 6 cut(s) | 170, 2354, 2698, 3575, 3937, 4026 |
| Bst6I | CTCTTC | 4 cut(s) | 441, 790, 3645, 3818 |
| BstACI | GRCGYC | 8 cut(s) | 1395, 1734, 2028, 2648, 3740, 4050, 4125, 4467 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 182, 4673 |
| BstBAI | YACGTR | 2 cut(s) | 1926, 2881 |
| BstBI | TTCGAA | 2 cut(s) | 1879, 3261 |
| BstDSI | CCRYGG | 4 cut(s) | 1484, 3456, 4054, 4263 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3574 |
| BstH2I | RGCGCY | 6 cut(s) | 16, 2890, 2936, 3625, 3743, 4470 |
| BstMCI | CGRYCG | 6 cut(s) | 1641, 2132, 2440, 2676, 4269, 4647 |
| BstNSI | RCATGY | 4 cut(s) | 610, 2785, 3907, 4360 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1926 |
| BstSFI | CTRYAG | 1 cut(s) | 2342 |
| BstSLI | GKGCMC | 4 cut(s) | 178, 2157, 3682, 4342 |
| BstV2I | GAAGAC | 6 cut(s) | 565, 1414, 1737, 1973, 3341, 4013 |
| BstX2I | RGATCY | 4 cut(s) | 4, 634, 1147, 3855 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3757 |
| BstYI | RGATCY | 4 cut(s) | 4, 634, 1147, 3855 |
| BstZI | CGGCCG | 2 cut(s) | 2673, 4266 |
| Bsu15I | ATCGAT | 1 cut(s) | 1339 |
| Bsu36I | CCTNAGG | 1 cut(s) | 4241 |
| BsuI | GTATCC | 1 cut(s) | 4249 |
| BsuTUI | ATCGAT | 1 cut(s) | 1339 |
| BtgI | CCRYGG | 4 cut(s) | 1484, 3456, 4054, 4263 |
| BtgZI | GCGATG | 3 cut(s) | 1363, 3284, 4328 |
| BtsI | GCAGTG | 4 cut(s) | 84, 101, 2312, 4130 |
| BtsIMutI | CAGTG | 8 cut(s) | 84, 101, 662, 2312, 2667, 2810, 3757, 4130 |
| CaiI | CAGNNNCTG | 3 cut(s) | 3138, 3491, 3931 |
| CciNI | GCGGCCGC | 1 cut(s) | 4266 |
| Cfr10I | RCCGGY | 5 cut(s) | 20, 1009, 3589, 3624, 4414 |
| Cfr42I | CCGCGG | 2 cut(s) | 4057, 4266 |
| Cfr9I | CCCGGG | 1 cut(s) | 4578 |
| ClaI | ATCGAT | 1 cut(s) | 1339 |
| CsiI | ACCWGGT | 2 cut(s) | 62, 257 |
| Csp6I | GTAC | 9 cut(s) | 144, 271, 471, 535, 898, 2878, 3091, 3509, 4425 |
| CspAI | ACCGGT | 2 cut(s) | 20, 1009 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2167, 2202 |
| CviQI | GTAC | 9 cut(s) | 144, 271, 471, 535, 898, 2878, 3091, 3509, 4425 |
| DinI | GGCGCC | 2 cut(s) | 3741, 4468 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 2537, 4510 |
| DriI | GACNNNNNGTC | 1 cut(s) | 4605 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 2537, 4510 |
| EaeI | YGGCCR | 6 cut(s) | 1975, 2673, 4023, 4071, 4266, 4416 |
| EagI | CGGCCG | 2 cut(s) | 2673, 4266 |
| Eam1104I | CTCTTC | 4 cut(s) | 441, 790, 3645, 3818 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 4605 |
| EarI | CTCTTC | 4 cut(s) | 441, 790, 3645, 3818 |
| Ecl136II | GAGCTC | 1 cut(s) | 3946 |
| EclXI | CGGCCG | 2 cut(s) | 2673, 4266 |
| Eco130I | CCWWGG | 6 cut(s) | 170, 2354, 2698, 3575, 3937, 4026 |
| Eco147I | AGGCCT | 1 cut(s) | 1232 |
| Eco24I | GRGCYC | 4 cut(s) | 1067, 3682, 3948, 4342 |
| Eco31I | GGTCTC | 5 cut(s) | 72, 762, 1399, 3347, 4592 |
| Eco32I | GATATC | 1 cut(s) | 1687 |
| Eco47I | GGWCC | 9 cut(s) | 289, 1070, 1219, 2378, 2982, 3934, 4084, 4512, 4623 |
| Eco52I | CGGCCG | 2 cut(s) | 2673, 4266 |
| Eco53kI | GAGCTC | 1 cut(s) | 3946 |
| Eco57I | CTGAAG | 4 cut(s) | 2100, 4232, 4269, 4382 |
| Eco72I | CACGTG | 1 cut(s) | 1926 |
| Eco81I | CCTNAGG | 1 cut(s) | 4241 |
| Eco88I | CYCGRG | 4 cut(s) | 42, 1664, 3350, 4578 |
| EcoICRI | GAGCTC | 1 cut(s) | 3946 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3574 |
| EcoO109I | RGGNCCY | 9 cut(s) | 164, 1219, 2837, 2982, 3678, 4084, 4338, 4339, 4512 |
| EcoRV | GATATC | 1 cut(s) | 1687 |
| EcoT14I | CCWWGG | 6 cut(s) | 170, 2354, 2698, 3575, 3937, 4026 |
| EcoT38I | GRGCYC | 4 cut(s) | 1067, 3682, 3948, 4342 |
| EgeI | GGCGCC | 2 cut(s) | 3741, 4468 |
| EheI | GGCGCC | 2 cut(s) | 3741, 4468 |
| ErhI | CCWWGG | 6 cut(s) | 170, 2354, 2698, 3575, 3937, 4026 |
| Esp3I | CGTCTC | 3 cut(s) | 3296, 3980, 4111 |
| FbaI | TGATCA | 1 cut(s) | 72 |
| FblI | GTMKAC | 2 cut(s) | 212, 2541 |
| FriOI | GRGCYC | 4 cut(s) | 1067, 3682, 3948, 4342 |
| GsaI | CCCAGC | 8 cut(s) | 1741, 2478, 3024, 3187, 3450, 3894, 4338, 4460 |
| GsuI | CTGGAG | 6 cut(s) | 1529, 2138, 2507, 3320, 3953, 4109 |
| HaeII | RGCGCY | 6 cut(s) | 16, 2890, 2936, 3625, 3743, 4470 |
| Hin1I | GRCGYC | 8 cut(s) | 1395, 1734, 2028, 2648, 3740, 4050, 4125, 4467 |
| HincII | GTYRAC | 5 cut(s) | 418, 704, 1317, 1921, 2542 |
| HindII | GTYRAC | 5 cut(s) | 418, 704, 1317, 1921, 2542 |
| HindIII | AAGCTT | 2 cut(s) | 1360, 1457 |
| HpaI | GTTAAC | 1 cut(s) | 1317 |
| Hpy188III | TCNNGA | 9 cut(s) | 44, 1108, 1145, 1508, 1549, 1666, 2387, 2947, 3613 |
| HpyCH4IV | ACGT | 8 cut(s) | 1395, 1925, 2205, 2594, 2880, 3044, 4068, 4125 |
| HpySE526I | ACGT | 8 cut(s) | 1395, 1925, 2205, 2594, 2880, 3044, 4068, 4125 |
| Hsp92I | GRCGYC | 8 cut(s) | 1395, 1734, 2028, 2648, 3740, 4050, 4125, 4467 |
| KasI | GGCGCC | 2 cut(s) | 3739, 4466 |
| KflI | GGGWCCC | 1 cut(s) | 4512 |
| Kpn2I | TCCGGA | 1 cut(s) | 1548 |
| KpnI | GGTACC | 1 cut(s) | 3512 |
| KroI | GCCGGC | 2 cut(s) | 3624, 4414 |
| KroNI | GCCGGC | 2 cut(s) | 3626, 4416 |
| Ksp22I | TGATCA | 1 cut(s) | 72 |
| KspAI | GTTAAC | 1 cut(s) | 1317 |
| KspI | CCGCGG | 2 cut(s) | 4057, 4266 |
| LguI | GCTCTTC | 1 cut(s) | 790 |
| LweI | GCATC | 6 cut(s) | 336, 583, 1425, 1455, 4396, 4663 |
| MabI | ACCWGGT | 2 cut(s) | 62, 257 |
| MaeII | ACGT | 8 cut(s) | 1395, 1925, 2205, 2594, 2880, 3044, 4068, 4125 |
| MbiI | CCGCTC | 6 cut(s) | 283, 3080, 3802, 4081, 4144, 4473 |
| MfeI | CAATTG | 1 cut(s) | 1248 |
| MflI | RGATCY | 4 cut(s) | 4, 634, 1147, 3855 |
| MhlI | GDGCHC | 6 cut(s) | 178, 1067, 2157, 3682, 3948, 4342 |
| MlsI | TGGCCA | 2 cut(s) | 4025, 4073 |
| MluI | ACGCGT | 1 cut(s) | 4102 |
| MluNI | TGGCCA | 2 cut(s) | 4025, 4073 |
| Mly113I | GGCGCC | 2 cut(s) | 3740, 4467 |
| MlyI | GAGTC | 9 cut(s) | 423, 1527, 2516, 3629, 3755, 4196, 4331, 4516, 4645 |
| MmeI | TCCRAC | 8 cut(s) | 532, 1955, 3039, 3091, 3193, 4095, 4521, 4634 |
| Mox20I | TGGCCA | 2 cut(s) | 4025, 4073 |
| MroI | TCCGGA | 1 cut(s) | 1548 |
| MroNI | GCCGGC | 2 cut(s) | 3624, 4414 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1115, 2856 |
| MscI | TGGCCA | 2 cut(s) | 4025, 4073 |
| MseI | TTAA | 6 cut(s) | 129, 1280, 1316, 2037, 3054, 4305 |
| MslI | CAYNNNNRTG | 6 cut(s) | 490, 2582, 3417, 4175, 4199, 4355 |
| Msp20I | TGGCCA | 2 cut(s) | 4025, 4073 |
| MunI | CAATTG | 1 cut(s) | 1248 |
| Mva1269I | GAATGC | 2 cut(s) | 997, 2506 |
| NaeI | GCCGGC | 2 cut(s) | 3626, 4416 |
| NarI | GGCGCC | 2 cut(s) | 3740, 4467 |
| NciI | CCSGG | 8 cut(s) | 1532, 2021, 2236, 2607, 2827, 3682, 4579, 4580 |
| NgoMIV | GCCGGC | 2 cut(s) | 3624, 4414 |
| NheI | GCTAGC | 1 cut(s) | 1769 |
| NmeAIII | GCCGAG | 1 cut(s) | 3848 |
| NmuCI | GTSAC | 6 cut(s) | 2575, 2704, 3565, 3752, 4201, 4395 |
| NotI | GCGGCCGC | 1 cut(s) | 4266 |
| NspI | RCATGY | 4 cut(s) | 610, 2785, 3907, 4360 |
| NspV | TTCGAA | 2 cut(s) | 1879, 3261 |
| OliI | CACNNNNGTG | 2 cut(s) | 490, 4199 |
| PceI | AGGCCT | 1 cut(s) | 1232 |
| PciI | ACATGT | 2 cut(s) | 2781, 3903 |
| PciSI | GCTCTTC | 1 cut(s) | 790 |
| PcsI | WCGNNNNNNNCGW | 8 cut(s) | 1345, 2066, 2288, 2380, 2571, 3906, 4074, 4640 |
| PctI | GAATGC | 2 cut(s) | 997, 2506 |
| PdiI | GCCGGC | 2 cut(s) | 3626, 4416 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1115, 2856 |
| PflFI | GACNNNGTC | 1 cut(s) | 4321 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 312, 2355, 2737, 2784 |
| PfoI | TCCNGGA | 3 cut(s) | 2115, 2523, 3297 |
| PinAI | ACCGGT | 2 cut(s) | 20, 1009 |
| Ple19I | CGATCG | 3 cut(s) | 2132, 2440, 4647 |
| PleI | GAGTC | 9 cut(s) | 422, 1526, 2515, 3629, 3755, 4195, 4330, 4516, 4644 |
| PluTI | GGCGCC | 2 cut(s) | 3743, 4470 |
| PmaCI | CACGTG | 1 cut(s) | 1926 |
| PmlI | CACGTG | 1 cut(s) | 1926 |
| PpsI | GAGTC | 9 cut(s) | 422, 1526, 2515, 3629, 3755, 4195, 4330, 4516, 4644 |
| Ppu21I | YACGTR | 2 cut(s) | 1926, 2881 |
| PpuMI | RGGWCCY | 4 cut(s) | 1219, 2982, 4084, 4512 |
| PscI | ACATGT | 2 cut(s) | 2781, 3903 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1926 |
| Psp124BI | GAGCTC | 1 cut(s) | 3948 |
| Psp5II | RGGWCCY | 4 cut(s) | 1219, 2982, 4084, 4512 |
| PspCI | CACGTG | 1 cut(s) | 1926 |
| PspFI | CCCAGC | 8 cut(s) | 1737, 2474, 3020, 3183, 3446, 3890, 4334, 4456 |
| PspOMI | GGGCCC | 2 cut(s) | 3678, 4338 |
| PspPPI | RGGWCCY | 4 cut(s) | 1219, 2982, 4084, 4512 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 196, 228 |
| PstNI | CAGNNNCTG | 3 cut(s) | 3138, 3491, 3931 |
| PsuI | RGATCY | 4 cut(s) | 4, 634, 1147, 3855 |
| PsyI | GACNNNGTC | 1 cut(s) | 4321 |
| PvuI | CGATCG | 3 cut(s) | 2132, 2440, 4647 |
| RsaI | GTAC | 9 cut(s) | 145, 272, 472, 536, 899, 2879, 3092, 3510, 4426 |
| RsaNI | GTAC | 9 cut(s) | 144, 271, 471, 535, 898, 2878, 3091, 3509, 4425 |
| RseI | CAYNNNNRTG | 6 cut(s) | 490, 2582, 3417, 4175, 4199, 4355 |
| SacI | GAGCTC | 1 cut(s) | 3948 |
| SacII | CCGCGG | 2 cut(s) | 4057, 4266 |
| SalI | GTCGAC | 1 cut(s) | 2540 |
| SapI | GCTCTTC | 1 cut(s) | 790 |
| SaqAI | TTAA | 6 cut(s) | 129, 1280, 1316, 2037, 3054, 4305 |
| ScaI | AGTACT | 2 cut(s) | 145, 899 |
| SchI | GAGTC | 9 cut(s) | 423, 1527, 2516, 3629, 3755, 4196, 4331, 4516, 4645 |
| SduI | GDGCHC | 6 cut(s) | 178, 1067, 2157, 3682, 3948, 4342 |
| SexAI | ACCWGGT | 2 cut(s) | 62, 257 |
| SfaNI | GCATC | 6 cut(s) | 336, 583, 1425, 1455, 4396, 4663 |
| SfcI | CTRYAG | 1 cut(s) | 2342 |
| SfoI | GGCGCC | 2 cut(s) | 3741, 4468 |
| Sfr303I | CCGCGG | 2 cut(s) | 4057, 4266 |
| SfuI | TTCGAA | 2 cut(s) | 1879, 3261 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3589 |
| SgrBI | CCGCGG | 2 cut(s) | 4057, 4266 |
| SgrDI | CGTCGACG | 1 cut(s) | 2540 |
| SinI | GGWCC | 9 cut(s) | 289, 1070, 1219, 2378, 2982, 3934, 4084, 4512, 4623 |
| SmaI | CCCGGG | 1 cut(s) | 4580 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 490, 2582, 3417, 4175, 4199, 4355 |
| SmlI | CTYRAG | 1 cut(s) | 758 |
| SmoI | CTYRAG | 1 cut(s) | 758 |
| SseBI | AGGCCT | 1 cut(s) | 1232 |
| SspDI | GGCGCC | 2 cut(s) | 3739, 4466 |
| SstI | GAGCTC | 1 cut(s) | 3948 |
| StuI | AGGCCT | 1 cut(s) | 1232 |
| StyI | CCWWGG | 6 cut(s) | 170, 2354, 2698, 3575, 3937, 4026 |
| TaiI | ACGT | 8 cut(s) | 1398, 1928, 2208, 2597, 2883, 3047, 4071, 4128 |
| TaqII | GACCGA | 3 cut(s) | 306, 2753, 4334 |
| TatI | WGTACW | 3 cut(s) | 143, 270, 897 |
| Tru1I | TTAA | 6 cut(s) | 129, 1280, 1316, 2037, 3054, 4305 |
| Tru9I | TTAA | 6 cut(s) | 129, 1280, 1316, 2037, 3054, 4305 |
| TscAI | CASTG | 8 cut(s) | 91, 108, 669, 2319, 2667, 2817, 3757, 4137 |
| TseFI | GTSAC | 6 cut(s) | 2575, 2704, 3565, 3752, 4201, 4395 |
| Tsp45I | GTSAC | 6 cut(s) | 2575, 2704, 3565, 3752, 4201, 4395 |
| TspMI | CCCGGG | 1 cut(s) | 4578 |
| TspRI | CASTG | 8 cut(s) | 91, 108, 669, 2319, 2667, 2817, 3757, 4137 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4321 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 312, 2355, 2737, 2784 |
| VneI | GTGCAC | 1 cut(s) | 2153 |
| VpaK11BI | GGWCC | 9 cut(s) | 289, 1070, 1219, 2378, 2982, 3934, 4084, 4512, 4623 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3574 |
| XapI | RAATTY | 4 cut(s) | 194, 1103, 1762, 2747 |
| XceI | RCATGY | 4 cut(s) | 610, 2785, 3907, 4360 |
| XmaI | CCCGGG | 1 cut(s) | 4578 |
| XmaJI | CCTAGG | 1 cut(s) | 170 |
| XmiI | GTMKAC | 2 cut(s) | 212, 2541 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1115, 2856 |
| ZraI | GACGTC | 2 cut(s) | 1396, 4126 |
| ZrmI | AGTACT | 2 cut(s) | 145, 899 |