Putative gypsy type transposon
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 572 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2347 |
| AatII | GACGTC | 1 cut(s) | 1875 |
| Acc36I | ACCTGC | 1 cut(s) | 572 |
| Acc65I | GGTACC | 2 cut(s) | 563, 2303 |
| AccB1I | GGYRCC | 5 cut(s) | 563, 751, 1534, 2195, 2303 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 387, 769, 816 |
| AccBSI | CCGCTC | 5 cut(s) | 472, 1285, 1624, 1837, 1966 |
| AccI | GTMKAC | 3 cut(s) | 573, 1128, 1234 |
| AccII | CGCG | 8 cut(s) | 290, 465, 1139, 1141, 1156, 1657, 1878, 2087 |
| AclWI | GGATC | 3 cut(s) | 706, 760, 1173 |
| AcoI | YGGCCR | 5 cut(s) | 831, 1467, 1845, 1893, 2025 |
| AcsI | RAATTY | 1 cut(s) | 779 |
| AcuI | CTGAAG | 2 cut(s) | 1669, 2091 |
| AcvI | CACGTG | 2 cut(s) | 203, 2390 |
| AcyI | GRCGYC | 3 cut(s) | 1535, 1739, 1872 |
| AfaI | GTAC | 5 cut(s) | 171, 565, 1046, 2080, 2305 |
| AflIII | ACRYGT | 4 cut(s) | 200, 202, 276, 2178 |
| AgeI | ACCGGT | 1 cut(s) | 1215 |
| AgsI | TTSAA | 4 cut(s) | 286, 619, 2102, 2185 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 997 |
| AjnI | CCWGG | 1 cut(s) | 768 |
| AleI | CACNNNNGTG | 1 cut(s) | 1302 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1586, 1618 |
| Alw21I | GWGCWC | 2 cut(s) | 428, 1770 |
| Alw26I | GTCTC | 5 cut(s) | 37, 118, 1793, 1933, 2267 |
| AlwI | GGATC | 3 cut(s) | 706, 760, 1173 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 769, 1753 |
| Ama87I | CYCGRG | 2 cut(s) | 2163, 2311 |
| ApaI | GGGCCC | 1 cut(s) | 2164 |
| ApoI | RAATTY | 1 cut(s) | 779 |
| AsiGI | ACCGGT | 1 cut(s) | 1215 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 888 |
| Asp718I | GGTACC | 2 cut(s) | 563, 2303 |
| AspLEI | GCGC | 8 cut(s) | 465, 657, 921, 967, 1141, 1405, 1537, 1659 |
| AsuC2I | CCSGG | 7 cut(s) | 268, 639, 859, 1390, 1471, 2164, 2165 |
| AsuHPI | GGTGA | 4 cut(s) | 449, 658, 1384, 2060 |
| AsuNHI | GCTAGC | 1 cut(s) | 494 |
| AvaI | CYCGRG | 2 cut(s) | 2163, 2311 |
| AvaII | GGWCC | 5 cut(s) | 1014, 1307, 1380, 1474, 2349 |
| BaeGI | GKGCMC | 2 cut(s) | 756, 2164 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 555, 588 |
| BalI | TGGCCA | 3 cut(s) | 833, 1847, 1895 |
| BanI | GGYRCC | 5 cut(s) | 563, 751, 1534, 2195, 2303 |
| BanII | GRGCYC | 3 cut(s) | 428, 1770, 2164 |
| BauI | CACGAG | 1 cut(s) | 713 |
| BbrPI | CACGTG | 2 cut(s) | 203, 2390 |
| BbsI | GAAGAC | 1 cut(s) | 2138 |
| Bbv12I | GWGCWC | 2 cut(s) | 428, 1770 |
| BccI | CCATC | 6 cut(s) | 223, 389, 554, 1620, 1904, 2017 |
| BceAI | ACGGC | 8 cut(s) | 554, 590, 681, 692, 1440, 1464, 1526, 1680 |
| BciT130I | CCWGG | 1 cut(s) | 770 |
| BciVI | GTATCC | 1 cut(s) | 2273 |
| BcnI | CCSGG | 7 cut(s) | 268, 639, 859, 1390, 1471, 2164, 2165 |
| BcoDI | GTCTC | 5 cut(s) | 37, 118, 1793, 1933, 2267 |
| BfaI | CTAG | 5 cut(s) | 359, 429, 459, 495, 1197 |
| BfmI | CTRYAG | 4 cut(s) | 213, 374, 1029, 1958 |
| BfoI | RGCGCY | 4 cut(s) | 922, 968, 1406, 1538 |
| BfuAI | ACCTGC | 1 cut(s) | 572 |
| BfuI | GTATCC | 1 cut(s) | 2273 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1499 |
| BlpI | GCTNAGC | 2 cut(s) | 36, 117 |
| Bme1390I | CCNGG | 8 cut(s) | 268, 639, 770, 859, 1390, 1471, 2164, 2165 |
| Bme18I | GGWCC | 5 cut(s) | 1014, 1307, 1380, 1474, 2349 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 997 |
| BmeT110I | CYCGRG | 2 cut(s) | 2163, 2311 |
| BmrFI | CCNGG | 8 cut(s) | 268, 639, 770, 859, 1390, 1471, 2164, 2165 |
| BmsI | GCATC | 2 cut(s) | 424, 1278 |
| BmtI | GCTAGC | 1 cut(s) | 498 |
| BpiI | GAAGAC | 1 cut(s) | 2138 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 665, 697 |
| BpmI | CTGGAG | 4 cut(s) | 746, 1427, 1775, 2319 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1769, 1977 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 36, 117 |
| BpuEI | CTTGAG | 1 cut(s) | 967 |
| BpuMI | CCSGG | 7 cut(s) | 268, 639, 859, 1390, 1471, 2164, 2165 |
| BsaAI | YACGTR | 2 cut(s) | 203, 2390 |
| BsaHI | GRCGYC | 3 cut(s) | 1535, 1739, 1872 |
| BsaI | GGTCTC | 1 cut(s) | 1793 |
| BsaJI | CCNNGG | 8 cut(s) | 638, 730, 922, 1470, 1848, 1876, 2142, 2163 |
| BsaWI | WCCGGW | 4 cut(s) | 160, 630, 1186, 1215 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 34, 64, 115, 145, 1443, 1473, 1586, 1616 |
| Bse118I | RCCGGY | 2 cut(s) | 1215, 1327 |
| Bse1I | ACTGG | 4 cut(s) | 1010, 1364, 1557, 1827 |
| Bse3DI | GCAATG | 1 cut(s) | 1255 |
| BseBI | CCWGG | 1 cut(s) | 770 |
| BseDI | CCNNGG | 8 cut(s) | 638, 730, 922, 1470, 1848, 1876, 2142, 2163 |
| BseGI | GGATG | 8 cut(s) | 234, 381, 415, 597, 676, 1293, 2028, 2335 |
| BseMI | GCAATG | 1 cut(s) | 1255 |
| BseMII | CTCAG | 7 cut(s) | 50, 131, 570, 1083, 1783, 2054, 2247 |
| BseNI | ACTGG | 4 cut(s) | 1010, 1364, 1557, 1827 |
| BseRI | GAGGAG | 1 cut(s) | 1370 |
| BseSI | GKGCMC | 2 cut(s) | 756, 2164 |
| BseYI | CCCAGC | 7 cut(s) | 506, 1268, 1627, 2041, 2156, 2293, 2352 |
| BsgI | GTGCAG | 1 cut(s) | 2021 |
| Bsh1236I | CGCG | 8 cut(s) | 290, 465, 1139, 1141, 1156, 1657, 1878, 2087 |
| BshNI | GGYRCC | 5 cut(s) | 563, 751, 1534, 2195, 2303 |
| BshTI | ACCGGT | 1 cut(s) | 1215 |
| BsiHKAI | GWGCWC | 2 cut(s) | 428, 1770 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2163, 2311 |
| BslFI | GGGAC | 6 cut(s) | 169, 1004, 1027, 1132, 1919, 2335 |
| BsmAI | GTCTC | 5 cut(s) | 37, 118, 1793, 1933, 2267 |
| BsmBI | CGTCTC | 1 cut(s) | 1933 |
| BsmFI | GGGAC | 6 cut(s) | 169, 1004, 1027, 1132, 1919, 2335 |
| BsmI | GAATGC | 2 cut(s) | 538, 1928 |
| Bso31I | GGTCTC | 1 cut(s) | 1793 |
| BsoBI | CYCGRG | 2 cut(s) | 2163, 2311 |
| Bsp120I | GGGCCC | 1 cut(s) | 2160 |
| Bsp1286I | GDGCHC | 4 cut(s) | 428, 756, 1770, 2164 |
| Bsp143I | GATC | 6 cut(s) | 698, 765, 975, 1055, 1165, 1947 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 36, 117 |
| BspCNI | CTCAG | 7 cut(s) | 49, 130, 569, 1084, 1782, 2055, 2248 |
| BspFNI | CGCG | 8 cut(s) | 290, 465, 1139, 1141, 1156, 1657, 1878, 2087 |
| BspMAI | CTGCAG | 1 cut(s) | 1962 |
| BspMI | ACCTGC | 1 cut(s) | 572 |
| BspOI | GCTAGC | 1 cut(s) | 498 |
| BspPI | GGATC | 3 cut(s) | 706, 760, 1173 |
| BspT107I | GGYRCC | 5 cut(s) | 563, 751, 1534, 2195, 2303 |
| BspTNI | GGTCTC | 1 cut(s) | 1793 |
| BsrBI | CCGCTC | 5 cut(s) | 472, 1285, 1624, 1837, 1966 |
| BsrDI | GCAATG | 1 cut(s) | 1255 |
| BsrFI | RCCGGY | 2 cut(s) | 1215, 1327 |
| BsrI | ACTGG | 4 cut(s) | 1010, 1364, 1557, 1827 |
| BssAI | RCCGGY | 2 cut(s) | 1215, 1327 |
| BssECI | CCNNGG | 8 cut(s) | 638, 730, 922, 1470, 1848, 1876, 2142, 2163 |
| BssMI | GATC | 6 cut(s) | 698, 765, 975, 1055, 1165, 1947 |
| BssNAI | GTATAC | 1 cut(s) | 1129 |
| BssNI | GRCGYC | 3 cut(s) | 1535, 1739, 1872 |
| BssSI | CACGAG | 1 cut(s) | 713 |
| BssT1I | CCWWGG | 2 cut(s) | 730, 1848 |
| Bst1107I | GTATAC | 1 cut(s) | 1129 |
| Bst2BI | CACGAG | 1 cut(s) | 713 |
| Bst2UI | CCWGG | 1 cut(s) | 770 |
| Bst4CI | ACNGT | 3 cut(s) | 192, 877, 1037 |
| Bst6I | CTCTTC | 4 cut(s) | 507, 1141, 1440, 1613 |
| BstACI | GRCGYC | 3 cut(s) | 1535, 1739, 1872 |
| BstBAI | YACGTR | 2 cut(s) | 203, 2390 |
| BstDEI | CTNAG | 9 cut(s) | 36, 117, 556, 986, 1092, 1769, 1977, 2063, 2256 |
| BstDSI | CCRYGG | 1 cut(s) | 1876 |
| BstEII | GGTNACC | 1 cut(s) | 2053 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1107, 1757, 1958 |
| BstF5I | GGATG | 8 cut(s) | 234, 381, 415, 597, 676, 1293, 2028, 2335 |
| BstFNI | CGCG | 8 cut(s) | 290, 465, 1139, 1141, 1156, 1657, 1878, 2087 |
| BstH2I | RGCGCY | 4 cut(s) | 922, 968, 1406, 1538 |
| BstHHI | GCGC | 8 cut(s) | 465, 657, 921, 967, 1141, 1405, 1537, 1659 |
| BstKTI | GATC | 6 cut(s) | 701, 768, 978, 1058, 1168, 1950 |
| BstMAI | GTCTC | 5 cut(s) | 37, 118, 1793, 1933, 2267 |
| BstMBI | GATC | 6 cut(s) | 698, 765, 975, 1055, 1165, 1947 |
| BstNI | CCWGG | 1 cut(s) | 770 |
| BstNSI | RCATGY | 2 cut(s) | 280, 2182 |
| BstPI | GGTNACC | 1 cut(s) | 2053 |
| BstSCI | CCNGG | 8 cut(s) | 266, 637, 768, 857, 1388, 1469, 2162, 2163 |
| BstSFI | CTRYAG | 4 cut(s) | 213, 374, 1029, 1958 |
| BstSLI | GKGCMC | 2 cut(s) | 756, 2164 |
| BstUI | CGCG | 8 cut(s) | 290, 465, 1139, 1141, 1156, 1657, 1878, 2087 |
| BstV2I | GAAGAC | 1 cut(s) | 2138 |
| BstX2I | RGATCY | 2 cut(s) | 698, 765 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1304 |
| BstYI | RGATCY | 2 cut(s) | 698, 765 |
| BstZ17I | GTATAC | 1 cut(s) | 1129 |
| BsuI | GTATCC | 1 cut(s) | 2273 |
| BtgI | CCRYGG | 1 cut(s) | 1876 |
| BtsCI | GGATG | 8 cut(s) | 234, 381, 415, 597, 676, 1293, 2028, 2335 |
| BtsI | GCAGTG | 2 cut(s) | 262, 344 |
| BtsIMutI | CAGTG | 5 cut(s) | 262, 344, 1371, 1552, 2135 |
| BveI | ACCTGC | 1 cut(s) | 572 |
| CaiI | CAGNNNCTG | 2 cut(s) | 769, 1753 |
| CfoI | GCGC | 8 cut(s) | 465, 657, 921, 967, 1141, 1405, 1537, 1659 |
| Cfr10I | RCCGGY | 2 cut(s) | 1215, 1327 |
| Cfr42I | CCGCGG | 1 cut(s) | 1879 |
| Cfr9I | CCCGGG | 1 cut(s) | 2163 |
| CseI | GACGC | 9 cut(s) | 308, 1012, 1145, 1728, 1915, 2076, 2205, 2237, 2252 |
| Csp6I | GTAC | 5 cut(s) | 170, 564, 1045, 2079, 2304 |
| CspAI | ACCGGT | 1 cut(s) | 1215 |
| CviAII | CATG | 6 cut(s) | 277, 332, 546, 835, 1721, 2179 |
| CviQI | GTAC | 5 cut(s) | 170, 564, 1045, 2079, 2304 |
| DdeI | CTNAG | 9 cut(s) | 36, 117, 556, 986, 1092, 1769, 1977, 2063, 2256 |
| DinI | GGCGCC | 1 cut(s) | 1536 |
| DpnI | GATC | 6 cut(s) | 700, 767, 977, 1057, 1167, 1949 |
| DpnII | GATC | 6 cut(s) | 698, 765, 975, 1055, 1165, 1947 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2347 |
| DriI | GACNNNNNGTC | 1 cut(s) | 997 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2347 |
| EaeI | YGGCCR | 5 cut(s) | 831, 1467, 1845, 1893, 2025 |
| Eam1104I | CTCTTC | 4 cut(s) | 507, 1141, 1440, 1613 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 997 |
| EarI | CTCTTC | 4 cut(s) | 507, 1141, 1440, 1613 |
| Ecl136II | GAGCTC | 2 cut(s) | 426, 1768 |
| Eco130I | CCWWGG | 2 cut(s) | 730, 1848 |
| Eco147I | AGGCCT | 1 cut(s) | 680 |
| Eco24I | GRGCYC | 3 cut(s) | 428, 1770, 2164 |
| Eco31I | GGTCTC | 1 cut(s) | 1793 |
| Eco47I | GGWCC | 5 cut(s) | 1014, 1307, 1380, 1474, 2349 |
| Eco53kI | GAGCTC | 2 cut(s) | 426, 1768 |
| Eco57I | CTGAAG | 2 cut(s) | 1669, 2091 |
| Eco72I | CACGTG | 2 cut(s) | 203, 2390 |
| Eco88I | CYCGRG | 2 cut(s) | 2163, 2311 |
| Eco91I | GGTNACC | 1 cut(s) | 2053 |
| EcoICRI | GAGCTC | 2 cut(s) | 426, 1768 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1107, 1757, 1958 |
| EcoO109I | RGGNCCY | 4 cut(s) | 869, 1014, 2160, 2349 |
| EcoO65I | GGTNACC | 1 cut(s) | 2053 |
| EcoRII | CCWGG | 1 cut(s) | 768 |
| EcoT14I | CCWWGG | 2 cut(s) | 730, 1848 |
| EcoT38I | GRGCYC | 3 cut(s) | 428, 1770, 2164 |
| EgeI | GGCGCC | 1 cut(s) | 1536 |
| EheI | GGCGCC | 1 cut(s) | 1536 |
| ErhI | CCWWGG | 2 cut(s) | 730, 1848 |
| Esp3I | CGTCTC | 1 cut(s) | 1933 |
| FaeI | CATG | 6 cut(s) | 280, 335, 549, 838, 1724, 2182 |
| FaqI | GGGAC | 6 cut(s) | 169, 1004, 1027, 1132, 1919, 2335 |
| FatI | CATG | 6 cut(s) | 276, 331, 545, 834, 1720, 2178 |
| FblI | GTMKAC | 3 cut(s) | 573, 1128, 1234 |
| FokI | GGATG | 8 cut(s) | 241, 368, 402, 604, 683, 1300, 2035, 2322 |
| FriOI | GRGCYC | 3 cut(s) | 428, 1770, 2164 |
| FspBI | CTAG | 5 cut(s) | 359, 429, 459, 495, 1197 |
| GlaI | GCGC | 8 cut(s) | 464, 656, 920, 966, 1140, 1404, 1536, 1658 |
| GsaI | CCCAGC | 7 cut(s) | 510, 1272, 1631, 2045, 2160, 2297, 2356 |
| GsuI | CTGGAG | 4 cut(s) | 746, 1427, 1775, 2319 |
| HaeII | RGCGCY | 4 cut(s) | 922, 968, 1406, 1538 |
| HgaI | GACGC | 9 cut(s) | 308, 1012, 1145, 1728, 1915, 2076, 2205, 2237, 2252 |
| HhaI | GCGC | 8 cut(s) | 465, 657, 921, 967, 1141, 1405, 1537, 1659 |
| Hin1I | GRCGYC | 3 cut(s) | 1535, 1739, 1872 |
| Hin1II | CATG | 6 cut(s) | 280, 335, 549, 838, 1724, 2182 |
| Hin6I | GCGC | 8 cut(s) | 463, 655, 919, 965, 1139, 1403, 1535, 1657 |
| HinP1I | GCGC | 8 cut(s) | 463, 655, 919, 965, 1139, 1403, 1535, 1657 |
| HincII | GTYRAC | 4 cut(s) | 198, 574, 610, 1235 |
| HindII | GTYRAC | 4 cut(s) | 198, 574, 610, 1235 |
| HpaI | GTTAAC | 1 cut(s) | 198 |
| HphI | GGTGA | 4 cut(s) | 449, 658, 1384, 2060 |
| Hpy166II | GTNNAC | 8 cut(s) | 198, 574, 610, 712, 943, 1129, 1235, 1550 |
| Hpy188III | TCNNGA | 6 cut(s) | 419, 713, 763, 979, 1436, 1792 |
| Hpy8I | GTNNAC | 8 cut(s) | 198, 574, 610, 712, 943, 1129, 1235, 1550 |
| HpyCH4III | ACNGT | 3 cut(s) | 192, 877, 1037 |
| HpyCH4IV | ACGT | 5 cut(s) | 202, 237, 626, 1872, 2389 |
| HpyCH4V | TGCA | 5 cut(s) | 335, 545, 1324, 1960, 2002 |
| HpyF3I | CTNAG | 9 cut(s) | 36, 117, 556, 986, 1092, 1769, 1977, 2063, 2256 |
| HpySE526I | ACGT | 5 cut(s) | 202, 237, 626, 1872, 2389 |
| Hsp92I | GRCGYC | 3 cut(s) | 1535, 1739, 1872 |
| Hsp92II | CATG | 6 cut(s) | 280, 335, 549, 838, 1724, 2182 |
| HspAI | GCGC | 8 cut(s) | 463, 655, 919, 965, 1139, 1403, 1535, 1657 |
| KasI | GGCGCC | 1 cut(s) | 1534 |
| KflI | GGGWCCC | 1 cut(s) | 2349 |
| KpnI | GGTACC | 2 cut(s) | 567, 2307 |
| KspAI | GTTAAC | 1 cut(s) | 198 |
| KspI | CCGCGG | 1 cut(s) | 1879 |
| Kzo9I | GATC | 6 cut(s) | 698, 765, 975, 1055, 1165, 1947 |
| LmnI | GCTCC | 9 cut(s) | 506, 962, 1257, 1282, 1357, 1507, 1912, 1939, 1963 |
| LweI | GCATC | 2 cut(s) | 424, 1278 |
| MaeI | CTAG | 5 cut(s) | 359, 429, 459, 495, 1197 |
| MaeII | ACGT | 5 cut(s) | 202, 237, 626, 1872, 2389 |
| MaeIII | GTNAC | 7 cut(s) | 394, 1345, 1372, 1859, 2053, 2217, 2385 |
| MalI | GATC | 6 cut(s) | 700, 767, 977, 1057, 1167, 1949 |
| MbiI | CCGCTC | 5 cut(s) | 472, 1285, 1624, 1837, 1966 |
| MboI | GATC | 6 cut(s) | 698, 765, 975, 1055, 1165, 1947 |
| MboII | GAAGA | 9 cut(s) | 524, 1076, 1155, 1158, 1457, 1498, 1600, 1787, 2143 |
| MfeI | CAATTG | 1 cut(s) | 1668 |
| MflI | RGATCY | 2 cut(s) | 698, 765 |
| MhlI | GDGCHC | 4 cut(s) | 428, 756, 1770, 2164 |
| MlsI | TGGCCA | 3 cut(s) | 833, 1847, 1895 |
| MluCI | AATT | 2 cut(s) | 779, 1668 |
| MluNI | TGGCCA | 3 cut(s) | 833, 1847, 1895 |
| Mly113I | GGCGCC | 1 cut(s) | 1535 |
| MlyI | GAGTC | 4 cut(s) | 958, 986, 1550, 2353 |
| MmeI | TCCRAC | 5 cut(s) | 1123, 1229, 1917, 2358, 2363 |
| Mox20I | TGGCCA | 3 cut(s) | 833, 1847, 1895 |
| MroXI | GAANNNNTTC | 1 cut(s) | 888 |
| MscI | TGGCCA | 3 cut(s) | 833, 1847, 1895 |
| MseI | TTAA | 5 cut(s) | 197, 1086, 1245, 2109, 2127 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1302, 1997 |
| Msp20I | TGGCCA | 3 cut(s) | 833, 1847, 1895 |
| MspR9I | CCNGG | 8 cut(s) | 268, 639, 770, 859, 1390, 1471, 2164, 2165 |
| MunI | CAATTG | 1 cut(s) | 1668 |
| Mva1269I | GAATGC | 2 cut(s) | 538, 1928 |
| MvaI | CCWGG | 1 cut(s) | 770 |
| MvnI | CGCG | 8 cut(s) | 290, 465, 1139, 1141, 1156, 1657, 1878, 2087 |
| NarI | GGCGCC | 1 cut(s) | 1535 |
| NciI | CCSGG | 7 cut(s) | 268, 639, 859, 1390, 1471, 2164, 2165 |
| NdeII | GATC | 6 cut(s) | 698, 765, 975, 1055, 1165, 1947 |
| NheI | GCTAGC | 1 cut(s) | 494 |
| NlaIII | CATG | 6 cut(s) | 280, 335, 549, 838, 1724, 2182 |
| NmeAIII | GCCGAG | 3 cut(s) | 947, 1591, 1670 |
| NmuCI | GTSAC | 5 cut(s) | 1345, 1372, 1859, 2217, 2385 |
| NspI | RCATGY | 2 cut(s) | 280, 2182 |
| OliI | CACNNNNGTG | 1 cut(s) | 1302 |
| PaqCI | CACCTGC | 1 cut(s) | 572 |
| PceI | AGGCCT | 1 cut(s) | 680 |
| PciI | ACATGT | 2 cut(s) | 276, 2178 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 320 |
| PctI | GAATGC | 2 cut(s) | 538, 1928 |
| PdmI | GAANNNNTTC | 1 cut(s) | 888 |
| PfeI | GAWTC | 7 cut(s) | 263, 311, 539, 685, 982, 1430, 2009 |
| PflFI | GACNNNGTC | 3 cut(s) | 48, 129, 1337 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 387, 769, 816 |
| PinAI | ACCGGT | 1 cut(s) | 1215 |
| PleI | GAGTC | 4 cut(s) | 957, 986, 1550, 2353 |
| PluTI | GGCGCC | 1 cut(s) | 1538 |
| PmaCI | CACGTG | 2 cut(s) | 203, 2390 |
| PmlI | CACGTG | 2 cut(s) | 203, 2390 |
| PpsI | GAGTC | 4 cut(s) | 957, 986, 1550, 2353 |
| Ppu21I | YACGTR | 2 cut(s) | 203, 2390 |
| PpuMI | RGGWCCY | 2 cut(s) | 1014, 2349 |
| PscI | ACATGT | 2 cut(s) | 276, 2178 |
| Psp124BI | GAGCTC | 2 cut(s) | 428, 1770 |
| Psp5II | RGGWCCY | 2 cut(s) | 1014, 2349 |
| Psp6I | CCWGG | 1 cut(s) | 768 |
| PspCI | CACGTG | 2 cut(s) | 203, 2390 |
| PspEI | GGTNACC | 1 cut(s) | 2053 |
| PspFI | CCCAGC | 7 cut(s) | 506, 1268, 1627, 2041, 2156, 2293, 2352 |
| PspGI | CCWGG | 1 cut(s) | 768 |
| PspOMI | GGGCCC | 1 cut(s) | 2160 |
| PspPPI | RGGWCCY | 2 cut(s) | 1014, 2349 |
| PstI | CTGCAG | 1 cut(s) | 1962 |
| PstNI | CAGNNNCTG | 2 cut(s) | 769, 1753 |
| PsuI | RGATCY | 2 cut(s) | 698, 765 |
| PsyI | GACNNNGTC | 3 cut(s) | 48, 129, 1337 |
| PvuII | CAGCTG | 1 cut(s) | 2297 |
| RsaI | GTAC | 5 cut(s) | 171, 565, 1046, 2080, 2305 |
| RsaNI | GTAC | 5 cut(s) | 170, 564, 1045, 2079, 2304 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1302, 1997 |
| SacI | GAGCTC | 2 cut(s) | 428, 1770 |
| SacII | CCGCGG | 1 cut(s) | 1879 |
| SalI | GTCGAC | 2 cut(s) | 572, 1233 |
| SaqAI | TTAA | 5 cut(s) | 197, 1086, 1245, 2109, 2127 |
| Sau3AI | GATC | 6 cut(s) | 698, 765, 975, 1055, 1165, 1947 |
| SchI | GAGTC | 4 cut(s) | 958, 986, 1550, 2353 |
| ScrFI | CCNGG | 8 cut(s) | 268, 639, 770, 859, 1390, 1471, 2164, 2165 |
| SduI | GDGCHC | 4 cut(s) | 428, 756, 1770, 2164 |
| SfaNI | GCATC | 2 cut(s) | 424, 1278 |
| SfcI | CTRYAG | 4 cut(s) | 213, 374, 1029, 1958 |
| SfoI | GGCGCC | 1 cut(s) | 1536 |
| Sfr303I | CCGCGG | 1 cut(s) | 1879 |
| SgrBI | CCGCGG | 1 cut(s) | 1879 |
| SgrDI | CGTCGACG | 1 cut(s) | 572 |
| SinI | GGWCC | 5 cut(s) | 1014, 1307, 1380, 1474, 2349 |
| SmaI | CCCGGG | 1 cut(s) | 2165 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1302, 1997 |
| SmlI | CTYRAG | 1 cut(s) | 946 |
| SmoI | CTYRAG | 1 cut(s) | 946 |
| Sse9I | AATT | 2 cut(s) | 779, 1668 |
| SseBI | AGGCCT | 1 cut(s) | 680 |
| SspDI | GGCGCC | 1 cut(s) | 1534 |
| SspMI | CTAG | 5 cut(s) | 359, 429, 459, 495, 1197 |
| SstI | GAGCTC | 2 cut(s) | 428, 1770 |
| StuI | AGGCCT | 1 cut(s) | 680 |
| StyD4I | CCNGG | 8 cut(s) | 266, 637, 768, 857, 1388, 1469, 2162, 2163 |
| StyI | CCWWGG | 2 cut(s) | 730, 1848 |
| TaaI | ACNGT | 3 cut(s) | 192, 877, 1037 |
| TaiI | ACGT | 5 cut(s) | 205, 240, 629, 1875, 2392 |
| TaqI | TCGA | 9 cut(s) | 207, 573, 683, 978, 1058, 1108, 1234, 1742, 1833 |
| TaqII | GACCGA | 1 cut(s) | 2156 |
| TasI | AATT | 2 cut(s) | 779, 1668 |
| TfiI | GAWTC | 7 cut(s) | 263, 311, 539, 685, 982, 1430, 2009 |
| Tru1I | TTAA | 5 cut(s) | 197, 1086, 1245, 2109, 2127 |
| Tru9I | TTAA | 5 cut(s) | 197, 1086, 1245, 2109, 2127 |
| TscAI | CASTG | 5 cut(s) | 262, 351, 1371, 1552, 2142 |
| TseFI | GTSAC | 5 cut(s) | 1345, 1372, 1859, 2217, 2385 |
| Tsp45I | GTSAC | 5 cut(s) | 1345, 1372, 1859, 2217, 2385 |
| TspDTI | ATGAA | 3 cut(s) | 851, 1077, 1935 |
| TspGWI | ACGGA | 2 cut(s) | 312, 2357 |
| TspMI | CCCGGG | 1 cut(s) | 2163 |
| TspRI | CASTG | 5 cut(s) | 262, 351, 1371, 1552, 2142 |
| Tth111I | GACNNNGTC | 3 cut(s) | 48, 129, 1337 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 387, 769, 816 |
| VpaK11BI | GGWCC | 5 cut(s) | 1014, 1307, 1380, 1474, 2349 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1107, 1757, 1958 |
| XapI | RAATTY | 1 cut(s) | 779 |
| XceI | RCATGY | 2 cut(s) | 280, 2182 |
| XmaI | CCCGGG | 1 cut(s) | 2163 |
| XmiI | GTMKAC | 3 cut(s) | 573, 1128, 1234 |
| XmnI | GAANNNNTTC | 1 cut(s) | 888 |
| XspI | CTAG | 5 cut(s) | 359, 429, 459, 495, 1197 |
| ZraI | GACGTC | 1 cut(s) | 1873 |