Putative gypsy type transposon
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 898, 1801 |
| Acc65I | GGTACC | 1 cut(s) | 1880 |
| AccB1I | GGYRCC | 4 cut(s) | 100, 1003, 1664, 1880 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 118, 165 |
| AccBSI | CCGCTC | 4 cut(s) | 754, 1093, 1306, 1435 |
| AccI | GTMKAC | 2 cut(s) | 477, 583 |
| AclWI | GGATC | 3 cut(s) | 109, 522, 642 |
| AcoI | YGGCCR | 2 cut(s) | 180, 1494 |
| AcsI | RAATTY | 2 cut(s) | 128, 652 |
| AcuI | CTGAAG | 2 cut(s) | 1138, 1560 |
| AcvI | CACGTG | 1 cut(s) | 1844 |
| AcyI | GRCGYC | 4 cut(s) | 1004, 1208, 1341, 1665 |
| AfaI | GTAC | 6 cut(s) | 60, 395, 1549, 1701, 1759, 1882 |
| AflIII | ACRYGT | 2 cut(s) | 1393, 1647 |
| AgsI | TTSAA | 3 cut(s) | 1571, 1579, 1654 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 346, 1896 |
| AjnI | CCWGG | 1 cut(s) | 117 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1055, 1087 |
| AluBI | AGCT | 7 cut(s) | 322, 1021, 1158, 1237, 1538, 1751, 1907 |
| AluI | AGCT | 7 cut(s) | 322, 1021, 1158, 1237, 1538, 1751, 1907 |
| Alw21I | GWGCWC | 1 cut(s) | 1239 |
| Alw26I | GTCTC | 8 cut(s) | 707, 906, 1262, 1282, 1402, 1721, 1883, 1956 |
| AlwI | GGATC | 3 cut(s) | 109, 522, 642 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 118 |
| Ama87I | CYCGRG | 5 cut(s) | 710, 1632, 1765, 1869, 1908 |
| ApaI | GGGCCC | 2 cut(s) | 946, 1633 |
| ApeKI | GCWGC | 9 cut(s) | 53, 276, 1216, 1361, 1423, 1426, 1471, 1770, 1949 |
| ApoI | RAATTY | 2 cut(s) | 128, 652 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 237 |
| Asp718I | GGTACC | 1 cut(s) | 1880 |
| AsuC2I | CCSGG | 6 cut(s) | 208, 1222, 1633, 1634, 1870, 1871 |
| AsuHPI | GGTGA | 2 cut(s) | 853, 1529 |
| AsuNHI | GCTAGC | 1 cut(s) | 682 |
| AvaI | CYCGRG | 5 cut(s) | 710, 1632, 1765, 1869, 1908 |
| AvaII | GGWCC | 4 cut(s) | 363, 849, 1803, 1914 |
| BaeGI | GKGCMC | 3 cut(s) | 105, 946, 1633 |
| BalI | TGGCCA | 1 cut(s) | 182 |
| BanI | GGYRCC | 4 cut(s) | 100, 1003, 1664, 1880 |
| BanII | GRGCYC | 3 cut(s) | 946, 1239, 1633 |
| BauI | CACGAG | 1 cut(s) | 62 |
| BbrPI | CACGTG | 1 cut(s) | 1844 |
| BbsI | GAAGAC | 2 cut(s) | 986, 1607 |
| Bbv12I | GWGCWC | 1 cut(s) | 1239 |
| BbvI | GCAGC | 9 cut(s) | 40, 263, 1228, 1373, 1410, 1413, 1483, 1782, 1936 |
| BccI | CCATC | 6 cut(s) | 625, 957, 1019, 1089, 1373, 1486 |
| BceAI | ACGGC | 5 cut(s) | 41, 751, 909, 1149, 1523 |
| BciT130I | CCWGG | 1 cut(s) | 119 |
| BcnI | CCSGG | 6 cut(s) | 208, 1222, 1633, 1634, 1870, 1871 |
| BcoDI | GTCTC | 8 cut(s) | 707, 906, 1262, 1282, 1402, 1721, 1883, 1956 |
| BfaI | CTAG | 3 cut(s) | 546, 683, 1022 |
| BfmI | CTRYAG | 4 cut(s) | 378, 717, 965, 1427 |
| BfoI | RGCGCY | 5 cut(s) | 271, 317, 889, 1007, 1668 |
| Bme1390I | CCNGG | 7 cut(s) | 119, 208, 1222, 1633, 1634, 1870, 1871 |
| Bme18I | GGWCC | 4 cut(s) | 363, 849, 1803, 1914 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 346, 1896 |
| BmeT110I | CYCGRG | 5 cut(s) | 710, 1632, 1765, 1869, 1908 |
| BmrFI | CCNGG | 7 cut(s) | 119, 208, 1222, 1633, 1634, 1870, 1871 |
| BmrI | ACTGGG | 1 cut(s) | 1890 |
| BmsI | GCATC | 1 cut(s) | 747 |
| BmtI | GCTAGC | 1 cut(s) | 686 |
| BmuI | ACTGGG | 1 cut(s) | 1890 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1733 |
| BpiI | GAAGAC | 2 cut(s) | 986, 1607 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 14, 46, 1010, 1042, 1059, 1091 |
| BpmI | CTGGAG | 5 cut(s) | 95, 896, 1244, 1773, 1877 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1238 |
| BpuEI | CTTGAG | 1 cut(s) | 316 |
| BpuMI | CCSGG | 6 cut(s) | 208, 1222, 1633, 1634, 1870, 1871 |
| BsaAI | YACGTR | 1 cut(s) | 1844 |
| BsaHI | GRCGYC | 4 cut(s) | 1004, 1208, 1341, 1665 |
| BsaI | GGTCTC | 1 cut(s) | 1262 |
| BsaJI | CCNNGG | 8 cut(s) | 79, 271, 675, 1220, 1345, 1611, 1632, 1869 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 653, 683, 912, 942, 1055, 1085 |
| Bse118I | RCCGGY | 6 cut(s) | 303, 564, 796, 1442, 1705, 1945 |
| Bse1I | ACTGG | 5 cut(s) | 359, 587, 833, 1296, 1896 |
| BseBI | CCWGG | 1 cut(s) | 119 |
| BseDI | CCNNGG | 8 cut(s) | 79, 271, 675, 1220, 1345, 1611, 1632, 1869 |
| BseGI | GGATG | 4 cut(s) | 25, 762, 1497, 1789 |
| BseMII | CTCAG | 4 cut(s) | 432, 744, 888, 1252 |
| BseNI | ACTGG | 5 cut(s) | 359, 587, 833, 1296, 1896 |
| BseSI | GKGCMC | 3 cut(s) | 105, 946, 1633 |
| BseXI | GCAGC | 9 cut(s) | 40, 263, 1228, 1373, 1410, 1413, 1483, 1782, 1936 |
| BseYI | CCCAGC | 9 cut(s) | 40, 568, 690, 857, 1096, 1510, 1625, 1747, 1806 |
| BsgI | GTGCAG | 1 cut(s) | 1490 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1934 |
| BshNI | GGYRCC | 4 cut(s) | 100, 1003, 1664, 1880 |
| BsiEI | CGRYCG | 1 cut(s) | 1934 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1239 |
| BsiHKCI | CYCGRG | 5 cut(s) | 710, 1632, 1765, 1869, 1908 |
| BslFI | GGGAC | 5 cut(s) | 353, 376, 740, 1388, 1789 |
| BsmAI | GTCTC | 8 cut(s) | 707, 906, 1262, 1282, 1402, 1721, 1883, 1956 |
| BsmBI | CGTCTC | 3 cut(s) | 1402, 1721, 1956 |
| BsmFI | GGGAC | 5 cut(s) | 353, 376, 740, 1388, 1789 |
| Bso31I | GGTCTC | 1 cut(s) | 1262 |
| BsoBI | CYCGRG | 5 cut(s) | 710, 1632, 1765, 1869, 1908 |
| Bsp120I | GGGCCC | 2 cut(s) | 942, 1629 |
| Bsp1286I | GDGCHC | 4 cut(s) | 105, 946, 1239, 1633 |
| Bsp143I | GATC | 6 cut(s) | 114, 324, 404, 514, 634, 1416 |
| Bsp68I | TCGCGA | 1 cut(s) | 612 |
| BspCNI | CTCAG | 4 cut(s) | 433, 743, 889, 1251 |
| BspMAI | CTGCAG | 2 cut(s) | 721, 1431 |
| BspOI | GCTAGC | 1 cut(s) | 686 |
| BspPI | GGATC | 3 cut(s) | 109, 522, 642 |
| BspQI | GCTCTTC | 1 cut(s) | 1227 |
| BspT107I | GGYRCC | 4 cut(s) | 100, 1003, 1664, 1880 |
| BspTNI | GGTCTC | 1 cut(s) | 1262 |
| BsrBI | CCGCTC | 4 cut(s) | 754, 1093, 1306, 1435 |
| BsrFI | RCCGGY | 6 cut(s) | 303, 564, 796, 1442, 1705, 1945 |
| BsrI | ACTGG | 5 cut(s) | 359, 587, 833, 1296, 1896 |
| BssAI | RCCGGY | 6 cut(s) | 303, 564, 796, 1442, 1705, 1945 |
| BssECI | CCNNGG | 8 cut(s) | 79, 271, 675, 1220, 1345, 1611, 1632, 1869 |
| BssMI | GATC | 6 cut(s) | 114, 324, 404, 514, 634, 1416 |
| BssNAI | GTATAC | 1 cut(s) | 478 |
| BssNI | GRCGYC | 4 cut(s) | 1004, 1208, 1341, 1665 |
| BssSI | CACGAG | 1 cut(s) | 62 |
| BssT1I | CCWWGG | 1 cut(s) | 79 |
| Bst1107I | GTATAC | 1 cut(s) | 478 |
| Bst2BI | CACGAG | 1 cut(s) | 62 |
| Bst2UI | CCWGG | 1 cut(s) | 119 |
| Bst4CI | ACNGT | 5 cut(s) | 226, 386, 700, 1047, 1880 |
| Bst6I | CTCTTC | 5 cut(s) | 490, 909, 1082, 1227, 1280 |
| BstACI | GRCGYC | 4 cut(s) | 1004, 1208, 1341, 1665 |
| BstBAI | YACGTR | 1 cut(s) | 1844 |
| BstDEI | CTNAG | 6 cut(s) | 335, 441, 730, 897, 1238, 1710 |
| BstDSI | CCRYGG | 1 cut(s) | 1345 |
| BstEII | GGTNACC | 1 cut(s) | 1522 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 456 |
| BstF5I | GGATG | 4 cut(s) | 25, 762, 1497, 1789 |
| BstH2I | RGCGCY | 5 cut(s) | 271, 317, 889, 1007, 1668 |
| BstKTI | GATC | 6 cut(s) | 117, 327, 407, 517, 637, 1419 |
| BstMAI | GTCTC | 8 cut(s) | 707, 906, 1262, 1282, 1402, 1721, 1883, 1956 |
| BstMBI | GATC | 6 cut(s) | 114, 324, 404, 514, 634, 1416 |
| BstMCI | CGRYCG | 1 cut(s) | 1934 |
| BstNI | CCWGG | 1 cut(s) | 119 |
| BstNSI | RCATGY | 1 cut(s) | 1651 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1733 |
| BstPI | GGTNACC | 1 cut(s) | 1522 |
| BstSCI | CCNGG | 7 cut(s) | 117, 206, 1220, 1631, 1632, 1868, 1869 |
| BstSFI | CTRYAG | 4 cut(s) | 378, 717, 965, 1427 |
| BstSLI | GKGCMC | 3 cut(s) | 105, 946, 1633 |
| BstV1I | GCAGC | 9 cut(s) | 40, 263, 1228, 1373, 1410, 1413, 1483, 1782, 1936 |
| BstV2I | GAAGAC | 2 cut(s) | 986, 1607 |
| BstX2I | RGATCY | 1 cut(s) | 114 |
| BstYI | RGATCY | 1 cut(s) | 114 |
| BstZ17I | GTATAC | 1 cut(s) | 478 |
| BtgI | CCRYGG | 1 cut(s) | 1345 |
| BtgZI | GCGATG | 1 cut(s) | 644 |
| BtsCI | GGATG | 4 cut(s) | 25, 762, 1497, 1789 |
| BtsIMutI | CAGTG | 4 cut(s) | 594, 840, 1021, 1604 |
| BtuMI | TCGCGA | 1 cut(s) | 612 |
| CaiI | CAGNNNCTG | 1 cut(s) | 118 |
| Cfr10I | RCCGGY | 6 cut(s) | 303, 564, 796, 1442, 1705, 1945 |
| Cfr42I | CCGCGG | 1 cut(s) | 1348 |
| Cfr9I | CCCGGG | 2 cut(s) | 1632, 1869 |
| CseI | GACGC | 9 cut(s) | 361, 494, 623, 1197, 1349, 1384, 1545, 1674, 1973 |
| Csp6I | GTAC | 6 cut(s) | 59, 394, 1548, 1700, 1758, 1881 |
| CviAII | CATG | 4 cut(s) | 184, 667, 1190, 1648 |
| CviQI | GTAC | 6 cut(s) | 59, 394, 1548, 1700, 1758, 1881 |
| DdeI | CTNAG | 6 cut(s) | 335, 441, 730, 897, 1238, 1710 |
| DinI | GGCGCC | 2 cut(s) | 1005, 1666 |
| DpnI | GATC | 6 cut(s) | 116, 326, 406, 516, 636, 1418 |
| DpnII | GATC | 6 cut(s) | 114, 324, 404, 514, 634, 1416 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 898, 1801 |
| DriI | GACNNNNNGTC | 2 cut(s) | 346, 1896 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 898, 1801 |
| EaeI | YGGCCR | 2 cut(s) | 180, 1494 |
| Eam1104I | CTCTTC | 5 cut(s) | 490, 909, 1082, 1227, 1280 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 346, 1896 |
| EarI | CTCTTC | 5 cut(s) | 490, 909, 1082, 1227, 1280 |
| Ecl136II | GAGCTC | 1 cut(s) | 1237 |
| Eco130I | CCWWGG | 1 cut(s) | 79 |
| Eco147I | AGGCCT | 1 cut(s) | 29 |
| Eco24I | GRGCYC | 3 cut(s) | 946, 1239, 1633 |
| Eco31I | GGTCTC | 1 cut(s) | 1262 |
| Eco47I | GGWCC | 4 cut(s) | 363, 849, 1803, 1914 |
| Eco53kI | GAGCTC | 1 cut(s) | 1237 |
| Eco57I | CTGAAG | 2 cut(s) | 1138, 1560 |
| Eco72I | CACGTG | 1 cut(s) | 1844 |
| Eco88I | CYCGRG | 5 cut(s) | 710, 1632, 1765, 1869, 1908 |
| Eco91I | GGTNACC | 1 cut(s) | 1522 |
| EcoICRI | GAGCTC | 1 cut(s) | 1237 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 456 |
| EcoO109I | RGGNCCY | 6 cut(s) | 218, 363, 942, 961, 1629, 1803 |
| EcoO65I | GGTNACC | 1 cut(s) | 1522 |
| EcoRII | CCWGG | 1 cut(s) | 117 |
| EcoT14I | CCWWGG | 1 cut(s) | 79 |
| EcoT38I | GRGCYC | 3 cut(s) | 946, 1239, 1633 |
| EgeI | GGCGCC | 2 cut(s) | 1005, 1666 |
| EheI | GGCGCC | 2 cut(s) | 1005, 1666 |
| ErhI | CCWWGG | 1 cut(s) | 79 |
| Esp3I | CGTCTC | 3 cut(s) | 1402, 1721, 1956 |
| FaeI | CATG | 4 cut(s) | 187, 670, 1193, 1651 |
| FaqI | GGGAC | 5 cut(s) | 353, 376, 740, 1388, 1789 |
| FatI | CATG | 4 cut(s) | 183, 666, 1189, 1647 |
| FblI | GTMKAC | 2 cut(s) | 477, 583 |
| FokI | GGATG | 4 cut(s) | 32, 769, 1504, 1776 |
| FriOI | GRGCYC | 3 cut(s) | 946, 1239, 1633 |
| FspBI | CTAG | 3 cut(s) | 546, 683, 1022 |
| GsaI | CCCAGC | 9 cut(s) | 44, 572, 694, 861, 1100, 1514, 1629, 1751, 1810 |
| GsuI | CTGGAG | 5 cut(s) | 95, 896, 1244, 1773, 1877 |
| HaeII | RGCGCY | 5 cut(s) | 271, 317, 889, 1007, 1668 |
| HgaI | GACGC | 9 cut(s) | 361, 494, 623, 1197, 1349, 1384, 1545, 1674, 1973 |
| Hin1I | GRCGYC | 4 cut(s) | 1004, 1208, 1341, 1665 |
| Hin1II | CATG | 4 cut(s) | 187, 670, 1193, 1651 |
| HincII | GTYRAC | 1 cut(s) | 584 |
| HindII | GTYRAC | 1 cut(s) | 584 |
| HphI | GGTGA | 2 cut(s) | 853, 1529 |
| Hpy166II | GTNNAC | 5 cut(s) | 61, 292, 478, 584, 706 |
| Hpy188III | TCNNGA | 6 cut(s) | 112, 328, 611, 905, 1261, 1856 |
| Hpy8I | GTNNAC | 5 cut(s) | 61, 292, 478, 584, 706 |
| Hpy99I | CGWCG | 6 cut(s) | 377, 617, 1135, 1213, 1798, 1834 |
| HpyCH4III | ACNGT | 5 cut(s) | 226, 386, 700, 1047, 1880 |
| HpyCH4IV | ACGT | 2 cut(s) | 1698, 1843 |
| HpyCH4V | TGCA | 8 cut(s) | 279, 719, 793, 1043, 1361, 1429, 1471, 1679 |
| HpyF3I | CTNAG | 6 cut(s) | 335, 441, 730, 897, 1238, 1710 |
| HpySE526I | ACGT | 2 cut(s) | 1698, 1843 |
| Hsp92I | GRCGYC | 4 cut(s) | 1004, 1208, 1341, 1665 |
| Hsp92II | CATG | 4 cut(s) | 187, 670, 1193, 1651 |
| KasI | GGCGCC | 2 cut(s) | 1003, 1664 |
| KflI | GGGWCCC | 1 cut(s) | 1803 |
| KpnI | GGTACC | 1 cut(s) | 1884 |
| KroI | GCCGGC | 3 cut(s) | 303, 1705, 1945 |
| KroNI | GCCGGC | 3 cut(s) | 305, 1707, 1947 |
| KspI | CCGCGG | 1 cut(s) | 1348 |
| Kzo9I | GATC | 6 cut(s) | 114, 324, 404, 514, 634, 1416 |
| LguI | GCTCTTC | 1 cut(s) | 1227 |
| LmnI | GCTCC | 4 cut(s) | 311, 751, 1063, 1432 |
| Lsp1109I | GCAGC | 9 cut(s) | 40, 263, 1228, 1373, 1410, 1413, 1483, 1782, 1936 |
| LweI | GCATC | 1 cut(s) | 747 |
| MaeI | CTAG | 3 cut(s) | 546, 683, 1022 |
| MaeII | ACGT | 2 cut(s) | 1698, 1843 |
| MaeIII | GTNAC | 5 cut(s) | 841, 1328, 1522, 1686, 1839 |
| MalI | GATC | 6 cut(s) | 116, 326, 406, 516, 636, 1418 |
| MbiI | CCGCTC | 4 cut(s) | 754, 1093, 1306, 1435 |
| MboI | GATC | 6 cut(s) | 114, 324, 404, 514, 634, 1416 |
| MfeI | CAATTG | 1 cut(s) | 1137 |
| MflI | RGATCY | 1 cut(s) | 114 |
| MhlI | GDGCHC | 4 cut(s) | 105, 946, 1239, 1633 |
| MlsI | TGGCCA | 1 cut(s) | 182 |
| MluCI | AATT | 3 cut(s) | 128, 652, 1137 |
| MluI | ACGCGT | 1 cut(s) | 1393 |
| MluNI | TGGCCA | 1 cut(s) | 182 |
| Mly113I | GGCGCC | 2 cut(s) | 1004, 1665 |
| MmeI | TCCRAC | 5 cut(s) | 472, 578, 1812, 1817, 1941 |
| Mox20I | TGGCCA | 1 cut(s) | 182 |
| MroNI | GCCGGC | 3 cut(s) | 303, 1705, 1945 |
| MroXI | GAANNNNTTC | 1 cut(s) | 237 |
| MscI | TGGCCA | 1 cut(s) | 182 |
| MseI | TTAA | 4 cut(s) | 435, 594, 1356, 1596 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1466 |
| Msp20I | TGGCCA | 1 cut(s) | 182 |
| MspA1I | CMGCKG | 9 cut(s) | 17, 44, 97, 857, 1347, 1474, 1565, 1751, 1773 |
| MspR9I | CCNGG | 7 cut(s) | 119, 208, 1222, 1633, 1634, 1870, 1871 |
| MunI | CAATTG | 1 cut(s) | 1137 |
| MvaI | CCWGG | 1 cut(s) | 119 |
| NaeI | GCCGGC | 3 cut(s) | 305, 1707, 1947 |
| NarI | GGCGCC | 2 cut(s) | 1004, 1665 |
| NciI | CCSGG | 6 cut(s) | 208, 1222, 1633, 1634, 1870, 1871 |
| NdeII | GATC | 6 cut(s) | 114, 324, 404, 514, 634, 1416 |
| NgoMIV | GCCGGC | 3 cut(s) | 303, 1705, 1945 |
| NheI | GCTAGC | 1 cut(s) | 682 |
| NlaIII | CATG | 4 cut(s) | 187, 670, 1193, 1651 |
| NmeAIII | GCCGAG | 4 cut(s) | 296, 700, 1060, 1139 |
| NmuCI | GTSAC | 4 cut(s) | 841, 1328, 1686, 1839 |
| NruI | TCGCGA | 1 cut(s) | 612 |
| NspI | RCATGY | 1 cut(s) | 1651 |
| PaeR7I | CTCGAG | 1 cut(s) | 1908 |
| PceI | AGGCCT | 1 cut(s) | 29 |
| PciI | ACATGT | 1 cut(s) | 1647 |
| PciSI | GCTCTTC | 1 cut(s) | 1227 |
| PdiI | GCCGGC | 3 cut(s) | 305, 1707, 1947 |
| PdmI | GAANNNNTTC | 1 cut(s) | 237 |
| PfeI | GAWTC | 3 cut(s) | 34, 331, 862 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 118, 165 |
| PluTI | GGCGCC | 2 cut(s) | 1007, 1668 |
| PmaCI | CACGTG | 1 cut(s) | 1844 |
| PmlI | CACGTG | 1 cut(s) | 1844 |
| Ppu21I | YACGTR | 1 cut(s) | 1844 |
| PpuMI | RGGWCCY | 2 cut(s) | 363, 1803 |
| PscI | ACATGT | 1 cut(s) | 1647 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1733 |
| Psp124BI | GAGCTC | 1 cut(s) | 1239 |
| Psp5II | RGGWCCY | 2 cut(s) | 363, 1803 |
| Psp6I | CCWGG | 1 cut(s) | 117 |
| PspCI | CACGTG | 1 cut(s) | 1844 |
| PspEI | GGTNACC | 1 cut(s) | 1522 |
| PspFI | CCCAGC | 9 cut(s) | 40, 568, 690, 857, 1096, 1510, 1625, 1747, 1806 |
| PspGI | CCWGG | 1 cut(s) | 117 |
| PspOMI | GGGCCC | 2 cut(s) | 942, 1629 |
| PspPPI | RGGWCCY | 2 cut(s) | 363, 1803 |
| PspXI | VCTCGAGB | 1 cut(s) | 1908 |
| PstI | CTGCAG | 2 cut(s) | 721, 1431 |
| PstNI | CAGNNNCTG | 1 cut(s) | 118 |
| PsuI | RGATCY | 1 cut(s) | 114 |
| PvuII | CAGCTG | 1 cut(s) | 1751 |
| RruI | TCGCGA | 1 cut(s) | 612 |
| RsaI | GTAC | 6 cut(s) | 60, 395, 1549, 1701, 1759, 1882 |
| RsaNI | GTAC | 6 cut(s) | 59, 394, 1548, 1700, 1758, 1881 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1466 |
| SacI | GAGCTC | 1 cut(s) | 1239 |
| SacII | CCGCGG | 1 cut(s) | 1348 |
| SalI | GTCGAC | 1 cut(s) | 582 |
| SapI | GCTCTTC | 1 cut(s) | 1227 |
| SaqAI | TTAA | 4 cut(s) | 435, 594, 1356, 1596 |
| Sau3AI | GATC | 6 cut(s) | 114, 324, 404, 514, 634, 1416 |
| ScrFI | CCNGG | 7 cut(s) | 119, 208, 1222, 1633, 1634, 1870, 1871 |
| SduI | GDGCHC | 4 cut(s) | 105, 946, 1239, 1633 |
| SfaNI | GCATC | 1 cut(s) | 747 |
| SfcI | CTRYAG | 4 cut(s) | 378, 717, 965, 1427 |
| SfoI | GGCGCC | 2 cut(s) | 1005, 1666 |
| Sfr274I | CTCGAG | 1 cut(s) | 1908 |
| Sfr303I | CCGCGG | 1 cut(s) | 1348 |
| SgrBI | CCGCGG | 1 cut(s) | 1348 |
| SinI | GGWCC | 4 cut(s) | 363, 849, 1803, 1914 |
| SlaI | CTCGAG | 1 cut(s) | 1908 |
| SmaI | CCCGGG | 2 cut(s) | 1634, 1871 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1466 |
| SmlI | CTYRAG | 2 cut(s) | 295, 1908 |
| SmoI | CTYRAG | 2 cut(s) | 295, 1908 |
| SrfI | GCCCGGGC | 1 cut(s) | 1634 |
| Sse9I | AATT | 3 cut(s) | 128, 652, 1137 |
| SseBI | AGGCCT | 1 cut(s) | 29 |
| SspDI | GGCGCC | 2 cut(s) | 1003, 1664 |
| SspMI | CTAG | 3 cut(s) | 546, 683, 1022 |
| SstI | GAGCTC | 1 cut(s) | 1239 |
| StuI | AGGCCT | 1 cut(s) | 29 |
| StyD4I | CCNGG | 7 cut(s) | 117, 206, 1220, 1631, 1632, 1868, 1869 |
| StyI | CCWWGG | 1 cut(s) | 79 |
| TaaI | ACNGT | 5 cut(s) | 226, 386, 700, 1047, 1880 |
| TaiI | ACGT | 2 cut(s) | 1701, 1846 |
| TaqII | GACCGA | 2 cut(s) | 1625, 1920 |
| TasI | AATT | 3 cut(s) | 128, 652, 1137 |
| TfiI | GAWTC | 3 cut(s) | 34, 331, 862 |
| Tru1I | TTAA | 4 cut(s) | 435, 594, 1356, 1596 |
| Tru9I | TTAA | 4 cut(s) | 435, 594, 1356, 1596 |
| TscAI | CASTG | 4 cut(s) | 594, 840, 1021, 1611 |
| TseFI | GTSAC | 4 cut(s) | 841, 1328, 1686, 1839 |
| TseI | GCWGC | 9 cut(s) | 53, 276, 1216, 1361, 1423, 1426, 1471, 1770, 1949 |
| Tsp45I | GTSAC | 4 cut(s) | 841, 1328, 1686, 1839 |
| TspDTI | ATGAA | 3 cut(s) | 200, 426, 1404 |
| TspGWI | ACGGA | 2 cut(s) | 1745, 1811 |
| TspMI | CCCGGG | 2 cut(s) | 1632, 1869 |
| TspRI | CASTG | 4 cut(s) | 594, 840, 1021, 1611 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 118, 165 |
| VpaK11BI | GGWCC | 4 cut(s) | 363, 849, 1803, 1914 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 456 |
| XapI | RAATTY | 2 cut(s) | 128, 652 |
| XceI | RCATGY | 1 cut(s) | 1651 |
| XhoI | CTCGAG | 1 cut(s) | 1908 |
| XmaI | CCCGGG | 2 cut(s) | 1632, 1869 |
| XmiI | GTMKAC | 2 cut(s) | 477, 583 |
| XmnI | GAANNNNTTC | 1 cut(s) | 237 |
| XspI | CTAG | 3 cut(s) | 546, 683, 1022 |