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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 5 cut(s) | 160, 1190, 1226, 1355, 1472 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1236 |
| AccBSI | CCGCTC | 2 cut(s) | 843, 981 |
| AccII | CGCG | 5 cut(s) | 309, 542, 723, 749, 1113 |
| AclWI | GGATC | 2 cut(s) | 88, 169 |
| AcoI | YGGCCR | 1 cut(s) | 1197 |
| AcuI | CTGAAG | 4 cut(s) | 47, 155, 489, 888 |
| AcyI | GRCGYC | 2 cut(s) | 958, 1191 |
| AfaI | GTAC | 3 cut(s) | 790, 1139, 1297 |
| AflIII | ACRYGT | 1 cut(s) | 222 |
| AgsI | TTSAA | 1 cut(s) | 1352 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1488 |
| AjiI | CACGTC | 1 cut(s) | 924 |
| AjnI | CCWGG | 8 cut(s) | 177, 486, 860, 950, 1019, 1031, 1339, 1446 |
| AluBI | AGCT | 6 cut(s) | 8, 244, 389, 987, 1521, 1571 |
| AluI | AGCT | 6 cut(s) | 8, 244, 389, 987, 1521, 1571 |
| Alw21I | GWGCWC | 1 cut(s) | 989 |
| Alw26I | GTCTC | 4 cut(s) | 365, 407, 1437, 1475 |
| AlwI | GGATC | 2 cut(s) | 88, 169 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 178 |
| Ama87I | CYCGRG | 5 cut(s) | 590, 645, 755, 1461, 1500 |
| ApaI | GGGCCC | 1 cut(s) | 721 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 652, 684 |
| AspLEI | GCGC | 7 cut(s) | 520, 542, 559, 615, 751, 1115, 1193 |
| AsuC2I | CCSGG | 6 cut(s) | 48, 370, 423, 1391, 1462, 1463 |
| AsuHPI | GGTGA | 6 cut(s) | 67, 556, 622, 823, 1075, 1091 |
| AvaI | CYCGRG | 5 cut(s) | 590, 645, 755, 1461, 1500 |
| AvaII | GGWCC | 3 cut(s) | 463, 534, 1017 |
| BaeGI | GKGCMC | 4 cut(s) | 165, 644, 721, 923 |
| BalI | TGGCCA | 1 cut(s) | 1199 |
| BanI | GGYRCC | 5 cut(s) | 160, 1190, 1226, 1355, 1472 |
| BanII | GRGCYC | 3 cut(s) | 654, 721, 989 |
| BauI | CACGAG | 2 cut(s) | 291, 1434 |
| BbsI | GAAGAC | 1 cut(s) | 740 |
| Bbv12I | GWGCWC | 1 cut(s) | 989 |
| BccI | CCATC | 3 cut(s) | 505, 1238, 1463 |
| BceAI | ACGGC | 7 cut(s) | 392, 423, 686, 753, 913, 926, 1112 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 746, 780 |
| BciT130I | CCWGG | 8 cut(s) | 179, 488, 862, 952, 1021, 1033, 1341, 1448 |
| BcnI | CCSGG | 6 cut(s) | 48, 370, 423, 1391, 1462, 1463 |
| BcoDI | GTCTC | 4 cut(s) | 365, 407, 1437, 1475 |
| BfaI | CTAG | 1 cut(s) | 800 |
| BfmI | CTRYAG | 1 cut(s) | 1214 |
| BfoI | RGCGCY | 2 cut(s) | 560, 1194 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 773, 1055 |
| Bme18I | GGWCC | 3 cut(s) | 463, 534, 1017 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1488 |
| BmeT110I | CYCGRG | 5 cut(s) | 590, 645, 755, 1461, 1500 |
| BmgBI | CACGTC | 1 cut(s) | 924 |
| BmrI | ACTGGG | 3 cut(s) | 1246, 1414, 1482 |
| BmsI | GCATC | 4 cut(s) | 327, 1242, 1256, 1543 |
| BmuI | ACTGGG | 3 cut(s) | 1246, 1414, 1482 |
| BoxI | GACNNNNGTC | 1 cut(s) | 357 |
| BpiI | GAAGAC | 1 cut(s) | 740 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 74, 106, 233, 265 |
| BpmI | CTGGAG | 4 cut(s) | 260, 638, 883, 1469 |
| Bpu10I | CCTNAGC | 2 cut(s) | 988, 1242 |
| BpuMI | CCSGG | 6 cut(s) | 48, 370, 423, 1391, 1462, 1463 |
| Bsa29I | ATCGAT | 1 cut(s) | 1250 |
| BsaHI | GRCGYC | 2 cut(s) | 958, 1191 |
| BsaI | GGTCTC | 1 cut(s) | 1475 |
| BsaWI | WCCGGW | 1 cut(s) | 39 |
| Bse118I | RCCGGY | 5 cut(s) | 21, 536, 1187, 1255, 1544 |
| Bse1I | ACTGG | 4 cut(s) | 1241, 1268, 1420, 1488 |
| Bse3DI | GCAATG | 2 cut(s) | 195, 1173 |
| BseBI | CCWGG | 8 cut(s) | 179, 488, 862, 952, 1021, 1033, 1341, 1448 |
| BseCI | ATCGAT | 1 cut(s) | 1250 |
| BseGI | GGATG | 2 cut(s) | 516, 1528 |
| BseMI | GCAATG | 2 cut(s) | 195, 1173 |
| BseMII | CTCAG | 3 cut(s) | 1002, 1085, 1418 |
| BseNI | ACTGG | 4 cut(s) | 1241, 1268, 1420, 1488 |
| BseRI | GAGGAG | 2 cut(s) | 95, 707 |
| BseSI | GKGCMC | 4 cut(s) | 165, 644, 721, 923 |
| BseYI | CCCAGC | 1 cut(s) | 616 |
| BsgI | GTGCAG | 1 cut(s) | 1308 |
| Bsh1236I | CGCG | 5 cut(s) | 309, 542, 723, 749, 1113 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1260 |
| BshNI | GGYRCC | 5 cut(s) | 160, 1190, 1226, 1355, 1472 |
| BshVI | ATCGAT | 1 cut(s) | 1250 |
| BsiEI | CGRYCG | 1 cut(s) | 1260 |
| BsiHKAI | GWGCWC | 1 cut(s) | 989 |
| BsiHKCI | CYCGRG | 5 cut(s) | 590, 645, 755, 1461, 1500 |
| BslFI | GGGAC | 4 cut(s) | 547, 609, 1030, 1476 |
| BsmAI | GTCTC | 4 cut(s) | 365, 407, 1437, 1475 |
| BsmBI | CGTCTC | 1 cut(s) | 365 |
| BsmFI | GGGAC | 4 cut(s) | 547, 609, 1030, 1476 |
| BsmI | GAATGC | 3 cut(s) | 91, 308, 784 |
| Bso31I | GGTCTC | 1 cut(s) | 1475 |
| BsoBI | CYCGRG | 5 cut(s) | 590, 645, 755, 1461, 1500 |
| Bsp120I | GGGCCC | 1 cut(s) | 717 |
| Bsp1286I | GDGCHC | 6 cut(s) | 165, 644, 654, 721, 923, 989 |
| Bsp143I | GATC | 3 cut(s) | 93, 174, 796 |
| Bsp19I | CCATGG | 2 cut(s) | 459, 1194 |
| BspCNI | CTCAG | 3 cut(s) | 1001, 1086, 1417 |
| BspDI | ATCGAT | 1 cut(s) | 1250 |
| BspFNI | CGCG | 5 cut(s) | 309, 542, 723, 749, 1113 |
| BspMAI | CTGCAG | 1 cut(s) | 1218 |
| BspPI | GGATC | 2 cut(s) | 88, 169 |
| BspT107I | GGYRCC | 5 cut(s) | 160, 1190, 1226, 1355, 1472 |
| BspTNI | GGTCTC | 1 cut(s) | 1475 |
| BsrBI | CCGCTC | 2 cut(s) | 843, 981 |
| BsrDI | GCAATG | 2 cut(s) | 195, 1173 |
| BsrFI | RCCGGY | 5 cut(s) | 21, 536, 1187, 1255, 1544 |
| BsrI | ACTGG | 4 cut(s) | 1241, 1268, 1420, 1488 |
| BssAI | RCCGGY | 5 cut(s) | 21, 536, 1187, 1255, 1544 |
| BssMI | GATC | 3 cut(s) | 93, 174, 796 |
| BssNI | GRCGYC | 2 cut(s) | 958, 1191 |
| BssSI | CACGAG | 2 cut(s) | 291, 1434 |
| BssT1I | CCWWGG | 2 cut(s) | 459, 1194 |
| Bst2BI | CACGAG | 2 cut(s) | 291, 1434 |
| Bst2UI | CCWGG | 8 cut(s) | 179, 488, 862, 952, 1021, 1033, 1341, 1448 |
| Bst4CI | ACNGT | 4 cut(s) | 76, 118, 467, 888 |
| Bst6I | CTCTTC | 1 cut(s) | 684 |
| BstACI | GRCGYC | 2 cut(s) | 958, 1191 |
| BstDEI | CTNAG | 4 cut(s) | 988, 1094, 1242, 1404 |
| BstDSI | CCRYGG | 3 cut(s) | 459, 702, 1194 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1024 |
| BstF5I | GGATG | 2 cut(s) | 516, 1528 |
| BstFNI | CGCG | 5 cut(s) | 309, 542, 723, 749, 1113 |
| BstH2I | RGCGCY | 2 cut(s) | 560, 1194 |
| BstHHI | GCGC | 7 cut(s) | 520, 542, 559, 615, 751, 1115, 1193 |
| BstKTI | GATC | 3 cut(s) | 96, 177, 799 |
| BstMAI | GTCTC | 4 cut(s) | 365, 407, 1437, 1475 |
| BstMBI | GATC | 3 cut(s) | 93, 174, 796 |
| BstMCI | CGRYCG | 1 cut(s) | 1260 |
| BstNI | CCWGG | 8 cut(s) | 179, 488, 862, 952, 1021, 1033, 1341, 1448 |
| BstNSI | RCATGY | 3 cut(s) | 226, 407, 1331 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 357 |
| BstSFI | CTRYAG | 1 cut(s) | 1214 |
| BstSLI | GKGCMC | 4 cut(s) | 165, 644, 721, 923 |
| BstUI | CGCG | 5 cut(s) | 309, 542, 723, 749, 1113 |
| BstV2I | GAAGAC | 1 cut(s) | 740 |
| BstX2I | RGATCY | 1 cut(s) | 174 |
| BstYI | RGATCY | 1 cut(s) | 174 |
| Bsu15I | ATCGAT | 1 cut(s) | 1250 |
| BsuTUI | ATCGAT | 1 cut(s) | 1250 |
| BtgI | CCRYGG | 3 cut(s) | 459, 702, 1194 |
| BtrI | CACGTC | 1 cut(s) | 924 |
| BtsCI | GGATG | 2 cut(s) | 516, 1528 |
| BtsI | GCAGTG | 3 cut(s) | 615, 1320, 1332 |
| BtsIMutI | CAGTG | 5 cut(s) | 114, 615, 1275, 1320, 1332 |
| CaiI | CAGNNNCTG | 1 cut(s) | 178 |
| CfoI | GCGC | 7 cut(s) | 520, 542, 559, 615, 751, 1115, 1193 |
| Cfr10I | RCCGGY | 5 cut(s) | 21, 536, 1187, 1255, 1544 |
| Cfr9I | CCCGGG | 1 cut(s) | 1461 |
| ClaI | ATCGAT | 1 cut(s) | 1250 |
| CseI | GACGC | 4 cut(s) | 409, 452, 564, 947 |
| Csp6I | GTAC | 3 cut(s) | 789, 1138, 1296 |
| CviAII | CATG | 7 cut(s) | 223, 404, 460, 496, 940, 1195, 1328 |
| CviQI | GTAC | 3 cut(s) | 789, 1138, 1296 |
| DdeI | CTNAG | 4 cut(s) | 988, 1094, 1242, 1404 |
| DinI | GGCGCC | 1 cut(s) | 1192 |
| DpnI | GATC | 3 cut(s) | 95, 176, 798 |
| DpnII | GATC | 3 cut(s) | 93, 174, 796 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1488 |
| EaeI | YGGCCR | 1 cut(s) | 1197 |
| Eam1104I | CTCTTC | 1 cut(s) | 684 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1488 |
| EarI | CTCTTC | 1 cut(s) | 684 |
| EciI | GGCGGA | 6 cut(s) | 57, 349, 1009, 1272, 1398, 1521 |
| Ecl136II | GAGCTC | 1 cut(s) | 987 |
| Eco130I | CCWWGG | 2 cut(s) | 459, 1194 |
| Eco24I | GRGCYC | 3 cut(s) | 654, 721, 989 |
| Eco31I | GGTCTC | 1 cut(s) | 1475 |
| Eco47I | GGWCC | 3 cut(s) | 463, 534, 1017 |
| Eco53kI | GAGCTC | 1 cut(s) | 987 |
| Eco57I | CTGAAG | 4 cut(s) | 47, 155, 489, 888 |
| Eco88I | CYCGRG | 5 cut(s) | 590, 645, 755, 1461, 1500 |
| EcoICRI | GAGCTC | 1 cut(s) | 987 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1024 |
| EcoO109I | RGGNCCY | 2 cut(s) | 717, 1017 |
| EcoRII | CCWGG | 8 cut(s) | 177, 486, 860, 950, 1019, 1031, 1339, 1446 |
| EcoT14I | CCWWGG | 2 cut(s) | 459, 1194 |
| EcoT38I | GRGCYC | 3 cut(s) | 654, 721, 989 |
| EgeI | GGCGCC | 1 cut(s) | 1192 |
| EheI | GGCGCC | 1 cut(s) | 1192 |
| ErhI | CCWWGG | 2 cut(s) | 459, 1194 |
| Esp3I | CGTCTC | 1 cut(s) | 365 |
| FaeI | CATG | 7 cut(s) | 226, 407, 463, 499, 943, 1198, 1331 |
| FaqI | GGGAC | 4 cut(s) | 547, 609, 1030, 1476 |
| FatI | CATG | 7 cut(s) | 222, 403, 459, 495, 939, 1194, 1327 |
| FokI | GGATG | 2 cut(s) | 523, 1515 |
| FriOI | GRGCYC | 3 cut(s) | 654, 721, 989 |
| FspBI | CTAG | 1 cut(s) | 800 |
| GlaI | GCGC | 7 cut(s) | 519, 541, 558, 614, 750, 1114, 1192 |
| GsaI | CCCAGC | 1 cut(s) | 620 |
| GsuI | CTGGAG | 4 cut(s) | 260, 638, 883, 1469 |
| HaeII | RGCGCY | 2 cut(s) | 560, 1194 |
| HgaI | GACGC | 4 cut(s) | 409, 452, 564, 947 |
| HhaI | GCGC | 7 cut(s) | 520, 542, 559, 615, 751, 1115, 1193 |
| Hin1I | GRCGYC | 2 cut(s) | 958, 1191 |
| Hin1II | CATG | 7 cut(s) | 226, 407, 463, 499, 943, 1198, 1331 |
| Hin6I | GCGC | 7 cut(s) | 518, 540, 557, 613, 749, 1113, 1191 |
| HinP1I | GCGC | 7 cut(s) | 518, 540, 557, 613, 749, 1113, 1191 |
| HincII | GTYRAC | 3 cut(s) | 19, 671, 891 |
| HindII | GTYRAC | 3 cut(s) | 19, 671, 891 |
| HinfI | GANTC | 9 cut(s) | 64, 289, 337, 415, 677, 803, 1040, 1386, 1411 |
| HphI | GGTGA | 6 cut(s) | 67, 556, 622, 823, 1075, 1091 |
| Hpy166II | GTNNAC | 3 cut(s) | 19, 671, 891 |
| Hpy188I | TCNGA | 5 cut(s) | 174, 323, 878, 1426, 1510 |
| Hpy188III | TCNNGA | 2 cut(s) | 293, 800 |
| Hpy8I | GTNNAC | 3 cut(s) | 19, 671, 891 |
| Hpy99I | CGWCG | 3 cut(s) | 76, 580, 928 |
| HpyAV | CCTTC | 7 cut(s) | 160, 179, 912, 1156, 1216, 1346, 1553 |
| HpyCH4III | ACNGT | 4 cut(s) | 76, 118, 467, 888 |
| HpyCH4IV | ACGT | 1 cut(s) | 923 |
| HpyCH4V | TGCA | 5 cut(s) | 121, 452, 939, 1216, 1325 |
| HpyF3I | CTNAG | 4 cut(s) | 988, 1094, 1242, 1404 |
| HpySE526I | ACGT | 1 cut(s) | 923 |
| Hsp92I | GRCGYC | 2 cut(s) | 958, 1191 |
| Hsp92II | CATG | 7 cut(s) | 226, 407, 463, 499, 943, 1198, 1331 |
| HspAI | GCGC | 7 cut(s) | 518, 540, 557, 613, 749, 1113, 1191 |
| KasI | GGCGCC | 1 cut(s) | 1190 |
| KroI | GCCGGC | 1 cut(s) | 1187 |
| KroNI | GCCGGC | 1 cut(s) | 1189 |
| Kzo9I | GATC | 3 cut(s) | 93, 174, 796 |
| LmnI | GCTCC | 6 cut(s) | 241, 657, 984, 1107, 1318, 1568 |
| LweI | GCATC | 4 cut(s) | 327, 1242, 1256, 1543 |
| MaeI | CTAG | 1 cut(s) | 800 |
| MaeII | ACGT | 1 cut(s) | 923 |
| MaeIII | GTNAC | 3 cut(s) | 145, 440, 628 |
| MalI | GATC | 3 cut(s) | 95, 176, 798 |
| MbiI | CCGCTC | 2 cut(s) | 843, 981 |
| MboI | GATC | 3 cut(s) | 93, 174, 796 |
| MboII | GAAGA | 4 cut(s) | 311, 701, 745, 1285 |
| MflI | RGATCY | 1 cut(s) | 174 |
| MhlI | GDGCHC | 6 cut(s) | 165, 644, 654, 721, 923, 989 |
| MlsI | TGGCCA | 1 cut(s) | 1199 |
| MluCI | AATT | 1 cut(s) | 711 |
| MluNI | TGGCCA | 1 cut(s) | 1199 |
| Mly113I | GGCGCC | 1 cut(s) | 1191 |
| MlyI | GAGTC | 8 cut(s) | 73, 283, 409, 671, 797, 1049, 1380, 1405 |
| MmeI | TCCRAC | 1 cut(s) | 1053 |
| Mox20I | TGGCCA | 1 cut(s) | 1199 |
| MroNI | GCCGGC | 1 cut(s) | 1187 |
| MscI | TGGCCA | 1 cut(s) | 1199 |
| Msp20I | TGGCCA | 1 cut(s) | 1199 |
| MspA1I | CMGCKG | 3 cut(s) | 8, 104, 1408 |
| Mva1269I | GAATGC | 3 cut(s) | 91, 308, 784 |
| MvaI | CCWGG | 8 cut(s) | 179, 488, 862, 952, 1021, 1033, 1341, 1448 |
| MvnI | CGCG | 5 cut(s) | 309, 542, 723, 749, 1113 |
| NaeI | GCCGGC | 1 cut(s) | 1189 |
| NarI | GGCGCC | 1 cut(s) | 1191 |
| NciI | CCSGG | 6 cut(s) | 48, 370, 423, 1391, 1462, 1463 |
| NcoI | CCATGG | 2 cut(s) | 459, 1194 |
| NdeII | GATC | 3 cut(s) | 93, 174, 796 |
| NgoMIV | GCCGGC | 1 cut(s) | 1187 |
| NlaIII | CATG | 7 cut(s) | 226, 407, 463, 499, 943, 1198, 1331 |
| NmeAIII | GCCGAG | 2 cut(s) | 1084, 1126 |
| NmuCI | GTSAC | 3 cut(s) | 145, 440, 628 |
| NspI | RCATGY | 3 cut(s) | 226, 407, 1331 |
| PaeI | GCATGC | 1 cut(s) | 407 |
| PciI | ACATGT | 1 cut(s) | 222 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 753 |
| PctI | GAATGC | 3 cut(s) | 91, 308, 784 |
| PdiI | GCCGGC | 1 cut(s) | 1189 |
| PfeI | GAWTC | 1 cut(s) | 337 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1236 |
| PfoI | TCCNGGA | 2 cut(s) | 1389, 1446 |
| PleI | GAGTC | 8 cut(s) | 72, 283, 409, 671, 797, 1048, 1380, 1405 |
| PluTI | GGCGCC | 1 cut(s) | 1194 |
| PpsI | GAGTC | 8 cut(s) | 72, 283, 409, 671, 797, 1048, 1380, 1405 |
| PpuMI | RGGWCCY | 1 cut(s) | 1017 |
| PscI | ACATGT | 1 cut(s) | 222 |
| PshAI | GACNNNNGTC | 1 cut(s) | 357 |
| Psp124BI | GAGCTC | 1 cut(s) | 989 |
| Psp5II | RGGWCCY | 1 cut(s) | 1017 |
| Psp6I | CCWGG | 8 cut(s) | 177, 486, 860, 950, 1019, 1031, 1339, 1446 |
| PspFI | CCCAGC | 1 cut(s) | 616 |
| PspGI | CCWGG | 8 cut(s) | 177, 486, 860, 950, 1019, 1031, 1339, 1446 |
| PspOMI | GGGCCC | 1 cut(s) | 717 |
| PspPPI | RGGWCCY | 1 cut(s) | 1017 |
| PstI | CTGCAG | 1 cut(s) | 1218 |
| PstNI | CAGNNNCTG | 1 cut(s) | 178 |
| PsuI | RGATCY | 1 cut(s) | 174 |
| PvuII | CAGCTG | 1 cut(s) | 8 |
| RsaI | GTAC | 3 cut(s) | 790, 1139, 1297 |
| RsaNI | GTAC | 3 cut(s) | 789, 1138, 1296 |
| SacI | GAGCTC | 1 cut(s) | 989 |
| Sau3AI | GATC | 3 cut(s) | 93, 174, 796 |
| SchI | GAGTC | 8 cut(s) | 73, 283, 409, 671, 797, 1049, 1380, 1405 |
| SduI | GDGCHC | 6 cut(s) | 165, 644, 654, 721, 923, 989 |
| SfaNI | GCATC | 4 cut(s) | 327, 1242, 1256, 1543 |
| SfcI | CTRYAG | 1 cut(s) | 1214 |
| SfoI | GGCGCC | 1 cut(s) | 1192 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1544 |
| SinI | GGWCC | 3 cut(s) | 463, 534, 1017 |
| SmaI | CCCGGG | 1 cut(s) | 1463 |
| SphI | GCATGC | 1 cut(s) | 407 |
| Sse9I | AATT | 1 cut(s) | 711 |
| SspDI | GGCGCC | 1 cut(s) | 1190 |
| SspMI | CTAG | 1 cut(s) | 800 |
| SstI | GAGCTC | 1 cut(s) | 989 |
| StyI | CCWWGG | 2 cut(s) | 459, 1194 |
| TaaI | ACNGT | 4 cut(s) | 76, 118, 467, 888 |
| TaiI | ACGT | 1 cut(s) | 926 |
| TaqI | TCGA | 3 cut(s) | 92, 477, 1250 |
| TasI | AATT | 1 cut(s) | 711 |
| TfiI | GAWTC | 1 cut(s) | 337 |
| TscAI | CASTG | 5 cut(s) | 121, 615, 1275, 1327, 1339 |
| TseFI | GTSAC | 3 cut(s) | 145, 440, 628 |
| Tsp45I | GTSAC | 3 cut(s) | 145, 440, 628 |
| TspDTI | ATGAA | 1 cut(s) | 956 |
| TspGWI | ACGGA | 1 cut(s) | 347 |
| TspMI | CCCGGG | 1 cut(s) | 1461 |
| TspRI | CASTG | 5 cut(s) | 121, 615, 1275, 1327, 1339 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1236 |
| VpaK11BI | GGWCC | 3 cut(s) | 463, 534, 1017 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1024 |
| XbaI | TCTAGA | 1 cut(s) | 799 |
| XceI | RCATGY | 3 cut(s) | 226, 407, 1331 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1201 |
| XmaI | CCCGGG | 1 cut(s) | 1461 |
| XspI | CTAG | 1 cut(s) | 800 |