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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1141 |
| Acc65I | GGTACC | 1 cut(s) | 238 |
| AccB1I | GGYRCC | 4 cut(s) | 149, 238, 469, 1097 |
| AccBSI | CCGCTC | 4 cut(s) | 532, 838, 1031, 1104 |
| AccII | CGCG | 6 cut(s) | 302, 813, 861, 887, 1022, 1249 |
| AclWI | GGATC | 2 cut(s) | 12, 593 |
| AcoI | YGGCCR | 4 cut(s) | 780, 828, 1023, 1047 |
| AcuI | CTGAAG | 2 cut(s) | 989, 1314 |
| AcyI | GRCGYC | 3 cut(s) | 470, 807, 1098 |
| AfaI | GTAC | 2 cut(s) | 240, 1057 |
| AflIII | ACRYGT | 2 cut(s) | 660, 859 |
| AgsI | TTSAA | 3 cut(s) | 173, 695, 719 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1236 |
| AjnI | CCWGG | 5 cut(s) | 27, 69, 87, 953, 984 |
| AluBI | AGCT | 9 cut(s) | 176, 449, 624, 647, 703, 736, 757, 820, 967 |
| AluI | AGCT | 9 cut(s) | 176, 449, 624, 647, 703, 736, 757, 820, 967 |
| Alw21I | GWGCWC | 1 cut(s) | 705 |
| Alw26I | GTCTC | 4 cut(s) | 77, 758, 868, 1223 |
| AlwI | GGATC | 2 cut(s) | 12, 593 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 688 |
| Ama87I | CYCGRG | 3 cut(s) | 80, 341, 1209 |
| ApaI | GGGCCC | 1 cut(s) | 412 |
| Asp718I | GGTACC | 1 cut(s) | 238 |
| AspS9I | GGNCC | 8 cut(s) | 58, 207, 408, 409, 427, 1143, 1221, 1254 |
| AsuC2I | CCSGG | 3 cut(s) | 412, 1210, 1211 |
| AsuHPI | GGTGA | 4 cut(s) | 85, 334, 539, 970 |
| AsuNHI | GCTAGC | 1 cut(s) | 757 |
| AvaI | CYCGRG | 3 cut(s) | 80, 341, 1209 |
| AvaII | GGWCC | 3 cut(s) | 1143, 1221, 1254 |
| AxyI | CCTNAGG | 1 cut(s) | 998 |
| BaeGI | GKGCMC | 2 cut(s) | 412, 596 |
| BalI | TGGCCA | 2 cut(s) | 782, 830 |
| BanI | GGYRCC | 4 cut(s) | 149, 238, 469, 1097 |
| BanII | GRGCYC | 2 cut(s) | 412, 705 |
| BauI | CACGAG | 1 cut(s) | 589 |
| BbsI | GAAGAC | 1 cut(s) | 71 |
| Bbv12I | GWGCWC | 1 cut(s) | 705 |
| BccI | CCATC | 3 cut(s) | 150, 518, 839 |
| BceAI | ACGGC | 2 cut(s) | 172, 893 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1264, 1298 |
| BciT130I | CCWGG | 5 cut(s) | 29, 71, 89, 955, 986 |
| BciVI | GTATCC | 1 cut(s) | 1006 |
| BcnI | CCSGG | 3 cut(s) | 412, 1210, 1211 |
| BcoDI | GTCTC | 4 cut(s) | 77, 758, 868, 1223 |
| BfaI | CTAG | 5 cut(s) | 287, 563, 578, 758, 1064 |
| BfmI | CTRYAG | 3 cut(s) | 619, 893, 1005 |
| BfoI | RGCGCY | 4 cut(s) | 341, 355, 473, 1101 |
| BfuI | GTATCC | 1 cut(s) | 1006 |
| Bme1390I | CCNGG | 8 cut(s) | 29, 71, 89, 412, 955, 986, 1210, 1211 |
| Bme18I | GGWCC | 3 cut(s) | 1143, 1221, 1254 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1236 |
| BmeT110I | CYCGRG | 3 cut(s) | 80, 341, 1209 |
| BmgT120I | GGNCC | 8 cut(s) | 58, 207, 408, 409, 427, 1143, 1221, 1254 |
| BmrFI | CCNGG | 8 cut(s) | 29, 71, 89, 412, 955, 986, 1210, 1211 |
| BmsI | GCATC | 2 cut(s) | 1027, 1294 |
| BmtI | GCTAGC | 1 cut(s) | 761 |
| BpiI | GAAGAC | 1 cut(s) | 71 |
| BpmI | CTGGAG | 1 cut(s) | 710 |
| Bpu10I | CCTNAGC | 2 cut(s) | 704, 1105 |
| BpuMI | CCSGG | 3 cut(s) | 412, 1210, 1211 |
| BsaHI | GRCGYC | 3 cut(s) | 470, 807, 1098 |
| BsaI | GGTCTC | 2 cut(s) | 77, 1223 |
| Bse118I | RCCGGY | 3 cut(s) | 319, 354, 1045 |
| Bse1I | ACTGG | 2 cut(s) | 100, 480 |
| Bse21I | CCTNAGG | 1 cut(s) | 998 |
| BseBI | CCWGG | 5 cut(s) | 29, 71, 89, 955, 986 |
| BseGI | GGATG | 4 cut(s) | 397, 529, 886, 1129 |
| BseMII | CTCAG | 3 cut(s) | 718, 989, 1119 |
| BseNI | ACTGG | 2 cut(s) | 100, 480 |
| BseRI | GAGGAG | 2 cut(s) | 326, 725 |
| BseSI | GKGCMC | 2 cut(s) | 412, 596 |
| BseX3I | CGGCCG | 1 cut(s) | 1023 |
| BseYI | CCCAGC | 4 cut(s) | 176, 647, 1087, 1146 |
| BsgI | GTGCAG | 2 cut(s) | 299, 638 |
| Bsh1236I | CGCG | 6 cut(s) | 302, 813, 861, 887, 1022, 1249 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1026, 1278 |
| BshNI | GGYRCC | 4 cut(s) | 149, 238, 469, 1097 |
| BsiEI | CGRYCG | 2 cut(s) | 1026, 1278 |
| BsiHKAI | GWGCWC | 1 cut(s) | 705 |
| BsiHKCI | CYCGRG | 3 cut(s) | 80, 341, 1209 |
| BsiSI | CCGG | 5 cut(s) | 320, 355, 412, 1046, 1210 |
| BslFI | GGGAC | 4 cut(s) | 46, 854, 1129, 1234 |
| BsmAI | GTCTC | 4 cut(s) | 77, 758, 868, 1223 |
| BsmBI | CGTCTC | 1 cut(s) | 868 |
| BsmFI | GGGAC | 4 cut(s) | 46, 854, 1129, 1234 |
| Bso31I | GGTCTC | 2 cut(s) | 77, 1223 |
| BsoBI | CYCGRG | 3 cut(s) | 80, 341, 1209 |
| Bsp120I | GGGCCC | 1 cut(s) | 408 |
| Bsp1286I | GDGCHC | 3 cut(s) | 412, 596, 705 |
| Bsp143I | GATC | 4 cut(s) | 4, 585, 1258, 1275 |
| BspCNI | CTCAG | 3 cut(s) | 717, 990, 1118 |
| BspFNI | CGCG | 6 cut(s) | 302, 813, 861, 887, 1022, 1249 |
| BspMAI | CTGCAG | 1 cut(s) | 897 |
| BspOI | GCTAGC | 1 cut(s) | 761 |
| BspPI | GGATC | 2 cut(s) | 12, 593 |
| BspT107I | GGYRCC | 4 cut(s) | 149, 238, 469, 1097 |
| BspTNI | GGTCTC | 2 cut(s) | 77, 1223 |
| BsrBI | CCGCTC | 4 cut(s) | 532, 838, 1031, 1104 |
| BsrFI | RCCGGY | 3 cut(s) | 319, 354, 1045 |
| BsrI | ACTGG | 2 cut(s) | 100, 480 |
| BssAI | RCCGGY | 3 cut(s) | 319, 354, 1045 |
| BssMI | GATC | 4 cut(s) | 4, 585, 1258, 1275 |
| BssNI | GRCGYC | 3 cut(s) | 470, 807, 1098 |
| BssSI | CACGAG | 1 cut(s) | 589 |
| BssT1I | CCWWGG | 2 cut(s) | 305, 783 |
| Bst2BI | CACGAG | 1 cut(s) | 589 |
| Bst2UI | CCWGG | 5 cut(s) | 29, 71, 89, 955, 986 |
| Bst4CI | ACNGT | 1 cut(s) | 217 |
| Bst6I | CTCTTC | 1 cut(s) | 548 |
| BstACI | GRCGYC | 3 cut(s) | 470, 807, 1098 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1304 |
| BstDEI | CTNAG | 3 cut(s) | 704, 998, 1105 |
| BstDSI | CCRYGG | 3 cut(s) | 186, 811, 1020 |
| BstF5I | GGATG | 4 cut(s) | 397, 529, 886, 1129 |
| BstFNI | CGCG | 6 cut(s) | 302, 813, 861, 887, 1022, 1249 |
| BstH2I | RGCGCY | 4 cut(s) | 341, 355, 473, 1101 |
| BstKTI | GATC | 4 cut(s) | 7, 588, 1261, 1278 |
| BstMAI | GTCTC | 4 cut(s) | 77, 758, 868, 1223 |
| BstMBI | GATC | 4 cut(s) | 4, 585, 1258, 1275 |
| BstMCI | CGRYCG | 2 cut(s) | 1026, 1278 |
| BstNI | CCWGG | 5 cut(s) | 29, 71, 89, 955, 986 |
| BstNSI | RCATGY | 2 cut(s) | 664, 1187 |
| BstSCI | CCNGG | 8 cut(s) | 27, 69, 87, 410, 953, 984, 1208, 1209 |
| BstSFI | CTRYAG | 3 cut(s) | 619, 893, 1005 |
| BstSLI | GKGCMC | 2 cut(s) | 412, 596 |
| BstUI | CGCG | 6 cut(s) | 302, 813, 861, 887, 1022, 1249 |
| BstV2I | GAAGAC | 1 cut(s) | 71 |
| BstX2I | RGATCY | 1 cut(s) | 585 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 487 |
| BstYI | RGATCY | 1 cut(s) | 585 |
| BstZI | CGGCCG | 1 cut(s) | 1023 |
| Bsu36I | CCTNAGG | 1 cut(s) | 998 |
| BsuI | GTATCC | 1 cut(s) | 1006 |
| BtgI | CCRYGG | 3 cut(s) | 186, 811, 1020 |
| BtsCI | GGATG | 4 cut(s) | 397, 529, 886, 1129 |
| BtsI | GCAGTG | 1 cut(s) | 1117 |
| BtsIMutI | CAGTG | 3 cut(s) | 222, 487, 1117 |
| CaiI | CAGNNNCTG | 1 cut(s) | 688 |
| CciNI | GCGGCCGC | 1 cut(s) | 1023 |
| Cfr10I | RCCGGY | 3 cut(s) | 319, 354, 1045 |
| Cfr13I | GGNCC | 8 cut(s) | 58, 207, 408, 409, 427, 1143, 1221, 1254 |
| Cfr42I | CCGCGG | 2 cut(s) | 814, 1023 |
| Cfr9I | CCCGGG | 1 cut(s) | 1209 |
| CseI | GACGC | 2 cut(s) | 815, 850 |
| Csp6I | GTAC | 2 cut(s) | 239, 1056 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 235, 270 |
| CviAII | CATG | 2 cut(s) | 661, 1184 |
| CviQI | GTAC | 2 cut(s) | 239, 1056 |
| DdeI | CTNAG | 3 cut(s) | 704, 998, 1105 |
| DinI | GGCGCC | 2 cut(s) | 471, 1099 |
| DpnI | GATC | 4 cut(s) | 6, 587, 1260, 1277 |
| DpnII | GATC | 4 cut(s) | 4, 585, 1258, 1275 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1141 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1236 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1141 |
| EaeI | YGGCCR | 4 cut(s) | 780, 828, 1023, 1047 |
| EagI | CGGCCG | 1 cut(s) | 1023 |
| Eam1104I | CTCTTC | 1 cut(s) | 548 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1236 |
| EarI | CTCTTC | 1 cut(s) | 548 |
| EciI | GGCGGA | 4 cut(s) | 755, 803, 937, 1229 |
| Ecl136II | GAGCTC | 1 cut(s) | 703 |
| EclXI | CGGCCG | 1 cut(s) | 1023 |
| Eco130I | CCWWGG | 2 cut(s) | 305, 783 |
| Eco24I | GRGCYC | 2 cut(s) | 412, 705 |
| Eco31I | GGTCTC | 2 cut(s) | 77, 1223 |
| Eco47I | GGWCC | 3 cut(s) | 1143, 1221, 1254 |
| Eco52I | CGGCCG | 1 cut(s) | 1023 |
| Eco53kI | GAGCTC | 1 cut(s) | 703 |
| Eco57I | CTGAAG | 2 cut(s) | 989, 1314 |
| Eco81I | CCTNAGG | 1 cut(s) | 998 |
| Eco88I | CYCGRG | 3 cut(s) | 80, 341, 1209 |
| EcoICRI | GAGCTC | 1 cut(s) | 703 |
| EcoO109I | RGGNCCY | 2 cut(s) | 408, 1143 |
| EcoRII | CCWGG | 5 cut(s) | 27, 69, 87, 953, 984 |
| EcoT14I | CCWWGG | 2 cut(s) | 305, 783 |
| EcoT38I | GRGCYC | 2 cut(s) | 412, 705 |
| EgeI | GGCGCC | 2 cut(s) | 471, 1099 |
| EheI | GGCGCC | 2 cut(s) | 471, 1099 |
| ErhI | CCWWGG | 2 cut(s) | 305, 783 |
| Esp3I | CGTCTC | 1 cut(s) | 868 |
| FaeI | CATG | 2 cut(s) | 664, 1187 |
| FaiI | YATR | 5 cut(s) | 518, 621, 662, 1185, 1226 |
| FaqI | GGGAC | 4 cut(s) | 46, 854, 1129, 1234 |
| FatI | CATG | 2 cut(s) | 660, 1183 |
| FauI | CCCGC | 8 cut(s) | 481, 525, 574, 818, 831, 1068, 1084, 1109 |
| FokI | GGATG | 4 cut(s) | 404, 536, 893, 1116 |
| FriOI | GRGCYC | 2 cut(s) | 412, 705 |
| FspBI | CTAG | 5 cut(s) | 287, 563, 578, 758, 1064 |
| GsaI | CCCAGC | 4 cut(s) | 180, 651, 1091, 1150 |
| GsuI | CTGGAG | 1 cut(s) | 710 |
| HaeII | RGCGCY | 4 cut(s) | 341, 355, 473, 1101 |
| HapII | CCGG | 5 cut(s) | 320, 355, 412, 1046, 1210 |
| HgaI | GACGC | 2 cut(s) | 815, 850 |
| Hin1I | GRCGYC | 3 cut(s) | 470, 807, 1098 |
| Hin1II | CATG | 2 cut(s) | 664, 1187 |
| HincII | GTYRAC | 2 cut(s) | 19, 298 |
| HindII | GTYRAC | 2 cut(s) | 19, 298 |
| HinfI | GANTC | 5 cut(s) | 491, 944, 1153, 1191, 1267 |
| HpaII | CCGG | 5 cut(s) | 320, 355, 412, 1046, 1210 |
| HphI | GGTGA | 4 cut(s) | 85, 334, 539, 970 |
| Hpy166II | GTNNAC | 4 cut(s) | 19, 76, 298, 460 |
| Hpy188I | TCNGA | 8 cut(s) | 46, 106, 445, 639, 1134, 1174, 1242, 1258 |
| Hpy188III | TCNNGA | 3 cut(s) | 343, 727, 1034 |
| Hpy8I | GTNNAC | 4 cut(s) | 19, 76, 298, 460 |
| Hpy99I | CGWCG | 7 cut(s) | 158, 170, 377, 445, 809, 1138, 1174 |
| HpyAV | CCTTC | 4 cut(s) | 418, 689, 974, 1133 |
| HpyCH4III | ACNGT | 1 cut(s) | 217 |
| HpyCH4IV | ACGT | 1 cut(s) | 825 |
| HpyCH4V | TGCA | 4 cut(s) | 280, 655, 895, 937 |
| HpyF3I | CTNAG | 3 cut(s) | 704, 998, 1105 |
| HpySE526I | ACGT | 1 cut(s) | 825 |
| Hsp92I | GRCGYC | 3 cut(s) | 470, 807, 1098 |
| Hsp92II | CATG | 2 cut(s) | 664, 1187 |
| KasI | GGCGCC | 2 cut(s) | 469, 1097 |
| KflI | GGGWCCC | 1 cut(s) | 1143 |
| KpnI | GGTACC | 1 cut(s) | 242 |
| KroI | GCCGGC | 2 cut(s) | 354, 1045 |
| KroNI | GCCGGC | 2 cut(s) | 356, 1047 |
| KspI | CCGCGG | 2 cut(s) | 814, 1023 |
| Kzo9I | GATC | 4 cut(s) | 4, 585, 1258, 1275 |
| LmnI | GCTCC | 7 cut(s) | 313, 700, 733, 874, 898, 964, 1036 |
| LweI | GCATC | 2 cut(s) | 1027, 1294 |
| MaeI | CTAG | 5 cut(s) | 287, 563, 578, 758, 1064 |
| MaeII | ACGT | 1 cut(s) | 825 |
| MaeIII | GTNAC | 3 cut(s) | 482, 794, 958 |
| MalI | GATC | 4 cut(s) | 6, 587, 1260, 1277 |
| MbiI | CCGCTC | 4 cut(s) | 532, 838, 1031, 1104 |
| MboI | GATC | 4 cut(s) | 4, 585, 1258, 1275 |
| MboII | GAAGA | 5 cut(s) | 76, 433, 535, 688, 1313 |
| MflI | RGATCY | 1 cut(s) | 585 |
| MhlI | GDGCHC | 3 cut(s) | 412, 596, 705 |
| MlsI | TGGCCA | 2 cut(s) | 782, 830 |
| MluI | ACGCGT | 1 cut(s) | 859 |
| MluNI | TGGCCA | 2 cut(s) | 782, 830 |
| Mly113I | GGCGCC | 2 cut(s) | 470, 1098 |
| MlyI | GAGTC | 4 cut(s) | 485, 953, 1147, 1276 |
| MmeI | TCCRAC | 5 cut(s) | 423, 852, 1152, 1157, 1265 |
| Mox20I | TGGCCA | 2 cut(s) | 782, 830 |
| MroNI | GCCGGC | 2 cut(s) | 354, 1045 |
| MscI | TGGCCA | 2 cut(s) | 782, 830 |
| MseI | TTAA | 1 cut(s) | 912 |
| MslI | CAYNNNNRTG | 2 cut(s) | 147, 932 |
| Msp20I | TGGCCA | 2 cut(s) | 782, 830 |
| MspA1I | CMGCKG | 4 cut(s) | 647, 813, 1022, 1091 |
| MspI | CCGG | 5 cut(s) | 320, 355, 412, 1046, 1210 |
| MspR9I | CCNGG | 8 cut(s) | 29, 71, 89, 412, 955, 986, 1210, 1211 |
| MvaI | CCWGG | 5 cut(s) | 29, 71, 89, 955, 986 |
| MvnI | CGCG | 6 cut(s) | 302, 813, 861, 887, 1022, 1249 |
| NaeI | GCCGGC | 2 cut(s) | 356, 1047 |
| NarI | GGCGCC | 2 cut(s) | 470, 1098 |
| NciI | CCSGG | 3 cut(s) | 412, 1210, 1211 |
| NdeII | GATC | 4 cut(s) | 4, 585, 1258, 1275 |
| NgoMIV | GCCGGC | 2 cut(s) | 354, 1045 |
| NheI | GCTAGC | 1 cut(s) | 757 |
| NlaIII | CATG | 2 cut(s) | 664, 1187 |
| NmeAIII | GCCGAG | 1 cut(s) | 605 |
| NmuCI | GTSAC | 3 cut(s) | 482, 794, 958 |
| NotI | GCGGCCGC | 1 cut(s) | 1023 |
| NspI | RCATGY | 2 cut(s) | 664, 1187 |
| PaeI | GCATGC | 1 cut(s) | 1187 |
| PaeR7I | CTCGAG | 1 cut(s) | 341 |
| PciI | ACATGT | 1 cut(s) | 660 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 162, 831, 1271 |
| PdiI | GCCGGC | 2 cut(s) | 356, 1047 |
| PfeI | GAWTC | 1 cut(s) | 1191 |
| Ple19I | CGATCG | 1 cut(s) | 1278 |
| PleI | GAGTC | 4 cut(s) | 485, 952, 1147, 1275 |
| PluTI | GGCGCC | 2 cut(s) | 473, 1101 |
| PpsI | GAGTC | 4 cut(s) | 485, 952, 1147, 1275 |
| PpuMI | RGGWCCY | 1 cut(s) | 1143 |
| PscI | ACATGT | 1 cut(s) | 660 |
| Psp124BI | GAGCTC | 1 cut(s) | 705 |
| Psp5II | RGGWCCY | 1 cut(s) | 1143 |
| Psp6I | CCWGG | 5 cut(s) | 27, 69, 87, 953, 984 |
| PspFI | CCCAGC | 4 cut(s) | 176, 647, 1087, 1146 |
| PspGI | CCWGG | 5 cut(s) | 27, 69, 87, 953, 984 |
| PspOMI | GGGCCC | 1 cut(s) | 408 |
| PspPI | GGNCC | 8 cut(s) | 58, 207, 408, 409, 427, 1143, 1221, 1254 |
| PspPPI | RGGWCCY | 1 cut(s) | 1143 |
| PstI | CTGCAG | 1 cut(s) | 897 |
| PstNI | CAGNNNCTG | 1 cut(s) | 688 |
| PsuI | RGATCY | 1 cut(s) | 585 |
| PvuI | CGATCG | 1 cut(s) | 1278 |
| PvuII | CAGCTG | 1 cut(s) | 647 |
| RsaI | GTAC | 2 cut(s) | 240, 1057 |
| RsaNI | GTAC | 2 cut(s) | 239, 1056 |
| RseI | CAYNNNNRTG | 2 cut(s) | 147, 932 |
| SacI | GAGCTC | 1 cut(s) | 705 |
| SacII | CCGCGG | 2 cut(s) | 814, 1023 |
| SaqAI | TTAA | 1 cut(s) | 912 |
| Sau3AI | GATC | 4 cut(s) | 4, 585, 1258, 1275 |
| Sau96I | GGNCC | 8 cut(s) | 58, 207, 408, 409, 427, 1143, 1221, 1254 |
| SchI | GAGTC | 4 cut(s) | 485, 953, 1147, 1276 |
| ScrFI | CCNGG | 8 cut(s) | 29, 71, 89, 412, 955, 986, 1210, 1211 |
| SduI | GDGCHC | 3 cut(s) | 412, 596, 705 |
| SfaNI | GCATC | 2 cut(s) | 1027, 1294 |
| SfcI | CTRYAG | 3 cut(s) | 619, 893, 1005 |
| SfoI | GGCGCC | 2 cut(s) | 471, 1099 |
| Sfr274I | CTCGAG | 1 cut(s) | 341 |
| Sfr303I | CCGCGG | 2 cut(s) | 814, 1023 |
| SgrAI | CRCCGGYG | 1 cut(s) | 319 |
| SgrBI | CCGCGG | 2 cut(s) | 814, 1023 |
| SinI | GGWCC | 3 cut(s) | 1143, 1221, 1254 |
| SlaI | CTCGAG | 1 cut(s) | 341 |
| SmaI | CCCGGG | 1 cut(s) | 1211 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 147, 932 |
| SmlI | CTYRAG | 1 cut(s) | 341 |
| SmoI | CTYRAG | 1 cut(s) | 341 |
| SphI | GCATGC | 1 cut(s) | 1187 |
| SspDI | GGCGCC | 2 cut(s) | 469, 1097 |
| SspMI | CTAG | 5 cut(s) | 287, 563, 578, 758, 1064 |
| SstI | GAGCTC | 1 cut(s) | 705 |
| StyD4I | CCNGG | 8 cut(s) | 27, 69, 87, 410, 953, 984, 1208, 1209 |
| StyI | CCWWGG | 2 cut(s) | 305, 783 |
| TaaI | ACNGT | 1 cut(s) | 217 |
| TaiI | ACGT | 1 cut(s) | 828 |
| TaqI | TCGA | 3 cut(s) | 342, 834, 1270 |
| TfiI | GAWTC | 1 cut(s) | 1191 |
| Tru1I | TTAA | 1 cut(s) | 912 |
| Tru9I | TTAA | 1 cut(s) | 912 |
| TscAI | CASTG | 3 cut(s) | 222, 487, 1117 |
| TseFI | GTSAC | 3 cut(s) | 482, 794, 958 |
| Tsp45I | GTSAC | 3 cut(s) | 482, 794, 958 |
| TspDTI | ATGAA | 1 cut(s) | 870 |
| TspGWI | ACGGA | 4 cut(s) | 524, 536, 977, 1151 |
| TspMI | CCCGGG | 1 cut(s) | 1209 |
| TspRI | CASTG | 3 cut(s) | 222, 487, 1117 |
| VpaK11BI | GGWCC | 3 cut(s) | 1143, 1221, 1254 |
| XceI | RCATGY | 2 cut(s) | 664, 1187 |
| XhoI | CTCGAG | 1 cut(s) | 341 |
| XmaI | CCCGGG | 1 cut(s) | 1209 |
| XspI | CTAG | 5 cut(s) | 287, 563, 578, 758, 1064 |