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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 260 |
| AccB1I | GGYRCC | 3 cut(s) | 472, 1094, 1222 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1140 |
| AccBSI | CCGCTC | 6 cut(s) | 532, 559, 697, 838, 850, 1210 |
| AccI | GTMKAC | 1 cut(s) | 789 |
| AccII | CGCG | 3 cut(s) | 237, 479, 503 |
| AclWI | GGATC | 3 cut(s) | 12, 316, 925 |
| AcoI | YGGCCR | 3 cut(s) | 822, 906, 1023 |
| AcuI | CTGAAG | 4 cut(s) | 329, 710, 920, 1139 |
| AcyI | GRCGYC | 1 cut(s) | 775 |
| AfaI | GTAC | 6 cut(s) | 41, 506, 1132, 1200, 1303, 1344 |
| AfeI | AGCGCT | 1 cut(s) | 93 |
| AflIII | ACRYGT | 1 cut(s) | 459 |
| AgsI | TTSAA | 2 cut(s) | 466, 1045 |
| AjiI | CACGTC | 2 cut(s) | 460, 766 |
| AjnI | CCWGG | 4 cut(s) | 747, 843, 953, 996 |
| AleI | CACNNNNGTG | 1 cut(s) | 338 |
| AluBI | AGCT | 6 cut(s) | 349, 437, 703, 803, 871, 1174 |
| AluI | AGCT | 6 cut(s) | 349, 437, 703, 803, 871, 1174 |
| Alw21I | GWGCWC | 2 cut(s) | 246, 705 |
| Alw26I | GTCTC | 1 cut(s) | 26 |
| Alw44I | GTGCAC | 1 cut(s) | 242 |
| AlwI | GGATC | 3 cut(s) | 12, 316, 925 |
| Ama87I | CYCGRG | 5 cut(s) | 443, 563, 687, 962, 1230 |
| Aor51HI | AGCGCT | 1 cut(s) | 93 |
| AoxI | GGCC | 8 cut(s) | 270, 314, 408, 744, 822, 906, 1023, 1322 |
| ApaI | GGGCCC | 1 cut(s) | 412 |
| ApaLI | GTGCAC | 1 cut(s) | 242 |
| ApeKI | GCWGC | 5 cut(s) | 160, 892, 950, 958, 1019 |
| AspLEI | GCGC | 6 cut(s) | 94, 223, 237, 261, 1072, 1252 |
| AspS9I | GGNCC | 5 cut(s) | 408, 409, 745, 841, 1323 |
| AsuC2I | CCSGG | 3 cut(s) | 49, 80, 1258 |
| AsuHPI | GGTGA | 7 cut(s) | 164, 197, 268, 539, 727, 820, 995 |
| AvaI | CYCGRG | 5 cut(s) | 443, 563, 687, 962, 1230 |
| AvaII | GGWCC | 1 cut(s) | 841 |
| BaeGI | GKGCMC | 5 cut(s) | 246, 412, 477, 639, 1099 |
| BanI | GGYRCC | 3 cut(s) | 472, 1094, 1222 |
| BanII | GRGCYC | 2 cut(s) | 412, 705 |
| BauI | CACGAG | 1 cut(s) | 656 |
| BbsI | GAAGAC | 1 cut(s) | 716 |
| Bbv12I | GWGCWC | 2 cut(s) | 246, 705 |
| BbvCI | CCTCAGC | 1 cut(s) | 1005 |
| BbvI | GCAGC | 5 cut(s) | 147, 879, 945, 962, 1006 |
| BccI | CCATC | 3 cut(s) | 150, 1213, 1333 |
| BceAI | ACGGC | 5 cut(s) | 257, 587, 642, 809, 999 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 434, 468 |
| BciT130I | CCWGG | 4 cut(s) | 749, 845, 955, 998 |
| BcnI | CCSGG | 3 cut(s) | 49, 80, 1258 |
| BcoDI | GTCTC | 1 cut(s) | 26 |
| BfaI | CTAG | 4 cut(s) | 89, 488, 1100, 1310 |
| BfmI | CTRYAG | 1 cut(s) | 948 |
| BfoI | RGCGCY | 3 cut(s) | 95, 224, 1073 |
| BlpI | GCTNAGC | 2 cut(s) | 60, 95 |
| Bme1390I | CCNGG | 7 cut(s) | 49, 80, 749, 845, 955, 998, 1258 |
| Bme18I | GGWCC | 1 cut(s) | 841 |
| BmeT110I | CYCGRG | 5 cut(s) | 443, 563, 687, 962, 1230 |
| BmgBI | CACGTC | 2 cut(s) | 460, 766 |
| BmgT120I | GGNCC | 5 cut(s) | 408, 409, 745, 841, 1323 |
| BmrFI | CCNGG | 7 cut(s) | 49, 80, 749, 845, 955, 998, 1258 |
| BmrI | ACTGGG | 3 cut(s) | 414, 1150, 1284 |
| BmsI | GCATC | 3 cut(s) | 796, 1104, 1170 |
| BmuI | ACTGGG | 3 cut(s) | 414, 1150, 1284 |
| BoxI | GACNNNNGTC | 1 cut(s) | 785 |
| BpiI | GAAGAC | 1 cut(s) | 716 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 304, 336 |
| BpmI | CTGGAG | 3 cut(s) | 599, 866, 893 |
| Bpu10I | CCTNAGC | 4 cut(s) | 704, 1005, 1175, 1211 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 60, 95 |
| BpuMI | CCSGG | 3 cut(s) | 49, 80, 1258 |
| BsaHI | GRCGYC | 1 cut(s) | 775 |
| BsaI | GGTCTC | 1 cut(s) | 26 |
| BsaJI | CCNNGG | 7 cut(s) | 105, 114, 444, 747, 811, 912, 997 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 23, 53 |
| Bse118I | RCCGGY | 2 cut(s) | 1158, 1188 |
| Bse1I | ACTGG | 4 cut(s) | 187, 409, 1145, 1290 |
| Bse3DI | GCAATG | 1 cut(s) | 279 |
| BseBI | CCWGG | 4 cut(s) | 749, 845, 955, 998 |
| BseDI | CCNNGG | 7 cut(s) | 105, 114, 444, 747, 811, 912, 997 |
| BseGI | GGATG | 4 cut(s) | 394, 1185, 1269, 1344 |
| BseMI | GCAATG | 1 cut(s) | 279 |
| BseMII | CTCAG | 5 cut(s) | 74, 718, 996, 1068, 1225 |
| BseNI | ACTGG | 4 cut(s) | 187, 409, 1145, 1290 |
| BseRI | GAGGAG | 4 cut(s) | 398, 429, 725, 1271 |
| BseSI | GKGCMC | 5 cut(s) | 246, 412, 477, 639, 1099 |
| BseX3I | CGGCCG | 1 cut(s) | 1023 |
| BseXI | GCAGC | 5 cut(s) | 147, 879, 945, 962, 1006 |
| BseYI | CCCAGC | 2 cut(s) | 231, 1271 |
| BsgI | GTGCAG | 1 cut(s) | 638 |
| Bsh1236I | CGCG | 3 cut(s) | 237, 479, 503 |
| Bsh1285I | CGRYCG | 3 cut(s) | 600, 1026, 1163 |
| BshFI | GGCC | 8 cut(s) | 272, 316, 410, 746, 824, 908, 1025, 1324 |
| BshNI | GGYRCC | 3 cut(s) | 472, 1094, 1222 |
| BsiEI | CGRYCG | 3 cut(s) | 600, 1026, 1163 |
| BsiHKAI | GWGCWC | 2 cut(s) | 246, 705 |
| BsiHKCI | CYCGRG | 5 cut(s) | 443, 563, 687, 962, 1230 |
| BsiSI | CCGG | 5 cut(s) | 48, 80, 1159, 1189, 1258 |
| BsiWI | CGTACG | 1 cut(s) | 504 |
| BslFI | GGGAC | 4 cut(s) | 193, 854, 871, 1189 |
| BsmAI | GTCTC | 1 cut(s) | 26 |
| BsmFI | GGGAC | 4 cut(s) | 193, 854, 871, 1189 |
| BsnI | GGCC | 8 cut(s) | 272, 316, 410, 746, 824, 908, 1025, 1324 |
| Bso31I | GGTCTC | 1 cut(s) | 26 |
| BsoBI | CYCGRG | 5 cut(s) | 443, 563, 687, 962, 1230 |
| Bsp120I | GGGCCC | 1 cut(s) | 408 |
| Bsp1286I | GDGCHC | 6 cut(s) | 246, 412, 477, 639, 705, 1099 |
| Bsp143I | GATC | 6 cut(s) | 4, 15, 308, 399, 898, 930 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 60, 95 |
| Bsp19I | CCATGG | 1 cut(s) | 811 |
| BspANI | GGCC | 8 cut(s) | 272, 316, 410, 746, 824, 908, 1025, 1324 |
| BspCNI | CTCAG | 6 cut(s) | 4, 73, 717, 997, 1069, 1224 |
| BspFNI | CGCG | 3 cut(s) | 237, 479, 503 |
| BspMAI | CTGCAG | 1 cut(s) | 952 |
| BspPI | GGATC | 3 cut(s) | 12, 316, 925 |
| BspT107I | GGYRCC | 3 cut(s) | 472, 1094, 1222 |
| BspTNI | GGTCTC | 1 cut(s) | 26 |
| BsrBI | CCGCTC | 6 cut(s) | 532, 559, 697, 838, 850, 1210 |
| BsrDI | GCAATG | 1 cut(s) | 279 |
| BsrFI | RCCGGY | 2 cut(s) | 1158, 1188 |
| BsrI | ACTGG | 4 cut(s) | 187, 409, 1145, 1290 |
| BssAI | RCCGGY | 2 cut(s) | 1158, 1188 |
| BssECI | CCNNGG | 7 cut(s) | 105, 114, 444, 747, 811, 912, 997 |
| BssMI | GATC | 6 cut(s) | 4, 15, 308, 399, 898, 930 |
| BssNI | GRCGYC | 1 cut(s) | 775 |
| BssSI | CACGAG | 1 cut(s) | 656 |
| BssT1I | CCWWGG | 1 cut(s) | 811 |
| Bst2BI | CACGAG | 1 cut(s) | 656 |
| Bst2UI | CCWGG | 4 cut(s) | 749, 845, 955, 998 |
| Bst4CI | ACNGT | 6 cut(s) | 70, 169, 527, 794, 1203, 1306 |
| Bst6I | CTCTTC | 1 cut(s) | 375 |
| BstACI | GRCGYC | 1 cut(s) | 775 |
| BstDEI | CTNAG | 9 cut(s) | 12, 60, 95, 146, 704, 1005, 1077, 1175, 1211 |
| BstDSI | CCRYGG | 2 cut(s) | 114, 811 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 782 |
| BstF5I | GGATG | 4 cut(s) | 394, 1185, 1269, 1344 |
| BstFNI | CGCG | 3 cut(s) | 237, 479, 503 |
| BstH2I | RGCGCY | 3 cut(s) | 95, 224, 1073 |
| BstHHI | GCGC | 6 cut(s) | 94, 223, 237, 261, 1072, 1252 |
| BstKTI | GATC | 6 cut(s) | 7, 18, 311, 402, 901, 933 |
| BstMAI | GTCTC | 1 cut(s) | 26 |
| BstMBI | GATC | 6 cut(s) | 4, 15, 308, 399, 898, 930 |
| BstMCI | CGRYCG | 3 cut(s) | 600, 1026, 1163 |
| BstNI | CCWGG | 4 cut(s) | 749, 845, 955, 998 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 785 |
| BstSCI | CCNGG | 7 cut(s) | 47, 78, 747, 843, 953, 996, 1256 |
| BstSFI | CTRYAG | 1 cut(s) | 948 |
| BstSLI | GKGCMC | 5 cut(s) | 246, 412, 477, 639, 1099 |
| BstUI | CGCG | 3 cut(s) | 237, 479, 503 |
| BstV1I | GCAGC | 5 cut(s) | 147, 879, 945, 962, 1006 |
| BstV2I | GAAGAC | 1 cut(s) | 716 |
| BstX2I | RGATCY | 1 cut(s) | 930 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 149 |
| BstYI | RGATCY | 1 cut(s) | 930 |
| BstZI | CGGCCG | 1 cut(s) | 1023 |
| BsuRI | GGCC | 8 cut(s) | 272, 316, 410, 746, 824, 908, 1025, 1324 |
| BtgI | CCRYGG | 2 cut(s) | 114, 811 |
| BtrI | CACGTC | 2 cut(s) | 460, 766 |
| BtsCI | GGATG | 4 cut(s) | 394, 1185, 1269, 1344 |
| BtsIMutI | CAGTG | 1 cut(s) | 402 |
| CciNI | GCGGCCGC | 1 cut(s) | 1023 |
| CfoI | GCGC | 6 cut(s) | 94, 223, 237, 261, 1072, 1252 |
| Cfr10I | RCCGGY | 2 cut(s) | 1158, 1188 |
| Cfr13I | GGNCC | 5 cut(s) | 408, 409, 745, 841, 1323 |
| CseI | GACGC | 2 cut(s) | 783, 1139 |
| Csp6I | GTAC | 6 cut(s) | 40, 505, 1131, 1199, 1302, 1343 |
| CviAII | CATG | 5 cut(s) | 37, 127, 336, 812, 1155 |
| CviQI | GTAC | 6 cut(s) | 40, 505, 1131, 1199, 1302, 1343 |
| DdeI | CTNAG | 9 cut(s) | 12, 60, 95, 146, 704, 1005, 1077, 1175, 1211 |
| DpnI | GATC | 6 cut(s) | 6, 17, 310, 401, 900, 932 |
| DpnII | GATC | 6 cut(s) | 4, 15, 308, 399, 898, 930 |
| EaeI | YGGCCR | 3 cut(s) | 822, 906, 1023 |
| EagI | CGGCCG | 1 cut(s) | 1023 |
| Eam1104I | CTCTTC | 1 cut(s) | 375 |
| EarI | CTCTTC | 1 cut(s) | 375 |
| EciI | GGCGGA | 3 cut(s) | 776, 1175, 1276 |
| Ecl136II | GAGCTC | 1 cut(s) | 703 |
| EclXI | CGGCCG | 1 cut(s) | 1023 |
| Eco130I | CCWWGG | 1 cut(s) | 811 |
| Eco147I | AGGCCT | 1 cut(s) | 316 |
| Eco24I | GRGCYC | 2 cut(s) | 412, 705 |
| Eco31I | GGTCTC | 1 cut(s) | 26 |
| Eco47I | GGWCC | 1 cut(s) | 841 |
| Eco47III | AGCGCT | 1 cut(s) | 93 |
| Eco52I | CGGCCG | 1 cut(s) | 1023 |
| Eco53kI | GAGCTC | 1 cut(s) | 703 |
| Eco57I | CTGAAG | 4 cut(s) | 329, 710, 920, 1139 |
| Eco88I | CYCGRG | 5 cut(s) | 443, 563, 687, 962, 1230 |
| EcoICRI | GAGCTC | 1 cut(s) | 703 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 782 |
| EcoO109I | RGGNCCY | 2 cut(s) | 408, 841 |
| EcoRII | CCWGG | 4 cut(s) | 747, 843, 953, 996 |
| EcoT14I | CCWWGG | 1 cut(s) | 811 |
| EcoT38I | GRGCYC | 2 cut(s) | 412, 705 |
| ErhI | CCWWGG | 1 cut(s) | 811 |
| FaeI | CATG | 5 cut(s) | 40, 130, 339, 815, 1158 |
| FaiI | YATR | 9 cut(s) | 38, 128, 263, 337, 592, 813, 884, 1156, 1328 |
| FaqI | GGGAC | 4 cut(s) | 193, 854, 871, 1189 |
| FatI | CATG | 5 cut(s) | 36, 126, 335, 811, 1154 |
| FblI | GTMKAC | 1 cut(s) | 789 |
| FokI | GGATG | 3 cut(s) | 401, 1192, 1276 |
| FriOI | GRGCYC | 2 cut(s) | 412, 705 |
| FspAI | RTGCGCAY | 1 cut(s) | 260 |
| FspBI | CTAG | 4 cut(s) | 89, 488, 1100, 1310 |
| FspI | TGCGCA | 1 cut(s) | 260 |
| GlaI | GCGC | 6 cut(s) | 93, 222, 236, 260, 1071, 1251 |
| GsaI | CCCAGC | 2 cut(s) | 235, 1275 |
| GsuI | CTGGAG | 3 cut(s) | 599, 866, 893 |
| HaeII | RGCGCY | 3 cut(s) | 95, 224, 1073 |
| HaeIII | GGCC | 8 cut(s) | 272, 316, 410, 746, 824, 908, 1025, 1324 |
| HapII | CCGG | 5 cut(s) | 48, 80, 1159, 1189, 1258 |
| HgaI | GACGC | 2 cut(s) | 783, 1139 |
| HhaI | GCGC | 6 cut(s) | 94, 223, 237, 261, 1072, 1252 |
| Hin1I | GRCGYC | 1 cut(s) | 775 |
| Hin1II | CATG | 5 cut(s) | 40, 130, 339, 815, 1158 |
| Hin6I | GCGC | 6 cut(s) | 92, 221, 235, 259, 1070, 1250 |
| HinP1I | GCGC | 6 cut(s) | 92, 221, 235, 259, 1070, 1250 |
| HincII | GTYRAC | 2 cut(s) | 607, 790 |
| HindII | GTYRAC | 2 cut(s) | 607, 790 |
| HinfI | GANTC | 6 cut(s) | 368, 797, 944, 1037, 1267, 1278 |
| HpaII | CCGG | 5 cut(s) | 48, 80, 1159, 1189, 1258 |
| HphI | GGTGA | 7 cut(s) | 164, 197, 268, 539, 727, 820, 995 |
| Hpy166II | GTNNAC | 5 cut(s) | 76, 244, 607, 790, 1302 |
| Hpy188I | TCNGA | 3 cut(s) | 106, 729, 1296 |
| Hpy188III | TCNNGA | 2 cut(s) | 443, 578 |
| Hpy8I | GTNNAC | 5 cut(s) | 76, 244, 607, 790, 1302 |
| Hpy99I | CGWCG | 1 cut(s) | 777 |
| HpyAV | CCTTC | 6 cut(s) | 111, 418, 916, 944, 1060, 1081 |
| HpyCH4III | ACNGT | 6 cut(s) | 70, 169, 527, 794, 1203, 1306 |
| HpyCH4IV | ACGT | 2 cut(s) | 459, 765 |
| HpyCH4V | TGCA | 4 cut(s) | 244, 655, 895, 950 |
| HpyF3I | CTNAG | 9 cut(s) | 12, 60, 95, 146, 704, 1005, 1077, 1175, 1211 |
| HpySE526I | ACGT | 2 cut(s) | 459, 765 |
| Hsp92I | GRCGYC | 1 cut(s) | 775 |
| Hsp92II | CATG | 5 cut(s) | 40, 130, 339, 815, 1158 |
| HspAI | GCGC | 6 cut(s) | 92, 221, 235, 259, 1070, 1250 |
| KroI | GCCGGC | 1 cut(s) | 1188 |
| KroNI | GCCGGC | 1 cut(s) | 1190 |
| Kzo9I | GATC | 6 cut(s) | 4, 15, 308, 399, 898, 930 |
| Lsp1109I | GCAGC | 5 cut(s) | 147, 879, 945, 962, 1006 |
| LweI | GCATC | 3 cut(s) | 796, 1104, 1170 |
| MaeI | CTAG | 4 cut(s) | 89, 488, 1100, 1310 |
| MaeII | ACGT | 2 cut(s) | 459, 765 |
| MaeIII | GTNAC | 3 cut(s) | 274, 715, 826 |
| MalI | GATC | 6 cut(s) | 6, 17, 310, 401, 900, 932 |
| MbiI | CCGCTC | 6 cut(s) | 532, 559, 697, 838, 850, 1210 |
| MboI | GATC | 6 cut(s) | 4, 15, 308, 399, 898, 930 |
| MboII | GAAGA | 3 cut(s) | 392, 433, 716 |
| MfeI | CAATTG | 1 cut(s) | 611 |
| MflI | RGATCY | 1 cut(s) | 930 |
| MhlI | GDGCHC | 6 cut(s) | 246, 412, 477, 639, 705, 1099 |
| MluCI | AATT | 2 cut(s) | 611, 860 |
| MlyI | GAGTC | 5 cut(s) | 362, 953, 1046, 1261, 1272 |
| MmeI | TCCRAC | 3 cut(s) | 270, 628, 1274 |
| MroNI | GCCGGC | 1 cut(s) | 1188 |
| MseI | TTAA | 3 cut(s) | 518, 969, 977 |
| MslI | CAYNNNNRTG | 2 cut(s) | 147, 338 |
| MspA1I | CMGCKG | 5 cut(s) | 326, 803, 940, 1031, 1275 |
| MspI | CCGG | 5 cut(s) | 48, 80, 1159, 1189, 1258 |
| MspR9I | CCNGG | 7 cut(s) | 49, 80, 749, 845, 955, 998, 1258 |
| MunI | CAATTG | 1 cut(s) | 611 |
| MvaI | CCWGG | 4 cut(s) | 749, 845, 955, 998 |
| MvnI | CGCG | 3 cut(s) | 237, 479, 503 |
| NaeI | GCCGGC | 1 cut(s) | 1190 |
| NciI | CCSGG | 3 cut(s) | 49, 80, 1258 |
| NcoI | CCATGG | 1 cut(s) | 811 |
| NdeII | GATC | 6 cut(s) | 4, 15, 308, 399, 898, 930 |
| NgoMIV | GCCGGC | 1 cut(s) | 1188 |
| NlaIII | CATG | 5 cut(s) | 40, 130, 339, 815, 1158 |
| NmeAIII | GCCGAG | 2 cut(s) | 535, 937 |
| NmuCI | GTSAC | 3 cut(s) | 274, 715, 826 |
| NotI | GCGGCCGC | 1 cut(s) | 1023 |
| NsbI | TGCGCA | 1 cut(s) | 260 |
| OliI | CACNNNNGTG | 1 cut(s) | 338 |
| PaeR7I | CTCGAG | 1 cut(s) | 687 |
| PceI | AGGCCT | 1 cut(s) | 316 |
| PdiI | GCCGGC | 1 cut(s) | 1190 |
| PfeI | GAWTC | 1 cut(s) | 797 |
| Pfl23II | CGTACG | 1 cut(s) | 504 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1140 |
| PleI | GAGTC | 5 cut(s) | 362, 952, 1045, 1261, 1272 |
| PpsI | GAGTC | 5 cut(s) | 362, 952, 1045, 1261, 1272 |
| PpuMI | RGGWCCY | 1 cut(s) | 841 |
| PshAI | GACNNNNGTC | 1 cut(s) | 785 |
| Psp124BI | GAGCTC | 1 cut(s) | 705 |
| Psp5II | RGGWCCY | 1 cut(s) | 841 |
| Psp6I | CCWGG | 4 cut(s) | 747, 843, 953, 996 |
| PspFI | CCCAGC | 2 cut(s) | 231, 1271 |
| PspGI | CCWGG | 4 cut(s) | 747, 843, 953, 996 |
| PspLI | CGTACG | 1 cut(s) | 504 |
| PspOMI | GGGCCC | 1 cut(s) | 408 |
| PspPI | GGNCC | 5 cut(s) | 408, 409, 745, 841, 1323 |
| PspPPI | RGGWCCY | 1 cut(s) | 841 |
| PspXI | VCTCGAGB | 1 cut(s) | 687 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 497, 529 |
| PstI | CTGCAG | 1 cut(s) | 952 |
| PsuI | RGATCY | 1 cut(s) | 930 |
| PvuII | CAGCTG | 1 cut(s) | 803 |
| RsaI | GTAC | 6 cut(s) | 41, 506, 1132, 1200, 1303, 1344 |
| RsaNI | GTAC | 6 cut(s) | 40, 505, 1131, 1199, 1302, 1343 |
| RseI | CAYNNNNRTG | 2 cut(s) | 147, 338 |
| SacI | GAGCTC | 1 cut(s) | 705 |
| SalI | GTCGAC | 1 cut(s) | 788 |
| SaqAI | TTAA | 3 cut(s) | 518, 969, 977 |
| Sau3AI | GATC | 6 cut(s) | 4, 15, 308, 399, 898, 930 |
| Sau96I | GGNCC | 5 cut(s) | 408, 409, 745, 841, 1323 |
| SchI | GAGTC | 5 cut(s) | 362, 953, 1046, 1261, 1272 |
| ScrFI | CCNGG | 7 cut(s) | 49, 80, 749, 845, 955, 998, 1258 |
| SduI | GDGCHC | 6 cut(s) | 246, 412, 477, 639, 705, 1099 |
| SfaNI | GCATC | 3 cut(s) | 796, 1104, 1170 |
| SfcI | CTRYAG | 1 cut(s) | 948 |
| Sfr274I | CTCGAG | 1 cut(s) | 687 |
| SinI | GGWCC | 1 cut(s) | 841 |
| SlaI | CTCGAG | 1 cut(s) | 687 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 147, 338 |
| SmlI | CTYRAG | 1 cut(s) | 687 |
| SmoI | CTYRAG | 1 cut(s) | 687 |
| Sse9I | AATT | 2 cut(s) | 611, 860 |
| SseBI | AGGCCT | 1 cut(s) | 316 |
| SspMI | CTAG | 4 cut(s) | 89, 488, 1100, 1310 |
| SstI | GAGCTC | 1 cut(s) | 705 |
| StuI | AGGCCT | 1 cut(s) | 316 |
| StyD4I | CCNGG | 7 cut(s) | 47, 78, 747, 843, 953, 996, 1256 |
| StyI | CCWWGG | 1 cut(s) | 811 |
| TaaI | ACNGT | 6 cut(s) | 70, 169, 527, 794, 1203, 1306 |
| TaiI | ACGT | 2 cut(s) | 462, 768 |
| TaqI | TCGA | 7 cut(s) | 18, 311, 596, 677, 688, 789, 1217 |
| TasI | AATT | 2 cut(s) | 611, 860 |
| TfiI | GAWTC | 1 cut(s) | 797 |
| Tru1I | TTAA | 3 cut(s) | 518, 969, 977 |
| Tru9I | TTAA | 3 cut(s) | 518, 969, 977 |
| TscAI | CASTG | 1 cut(s) | 409 |
| TseFI | GTSAC | 3 cut(s) | 274, 715, 826 |
| TseI | GCWGC | 5 cut(s) | 160, 892, 950, 958, 1019 |
| Tsp45I | GTSAC | 3 cut(s) | 274, 715, 826 |
| TspGWI | ACGGA | 1 cut(s) | 634 |
| TspRI | CASTG | 1 cut(s) | 409 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1140 |
| VneI | GTGCAC | 1 cut(s) | 242 |
| VpaK11BI | GGWCC | 1 cut(s) | 841 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 782 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 286 |
| XhoI | CTCGAG | 1 cut(s) | 687 |
| XmiI | GTMKAC | 1 cut(s) | 789 |
| XspI | CTAG | 4 cut(s) | 89, 488, 1100, 1310 |