No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1708 |
| Acc36I | ACCTGC | 1 cut(s) | 399 |
| AccB1I | GGYRCC | 3 cut(s) | 922, 1571, 1787 |
| AccBSI | CCGCTC | 4 cut(s) | 985, 1012, 1213, 1342 |
| AccI | GTMKAC | 1 cut(s) | 387 |
| AccII | CGCG | 6 cut(s) | 309, 465, 760, 1254, 1328, 1847 |
| AclWI | GGATC | 3 cut(s) | 326, 495, 1290 |
| AcoI | YGGCCR | 3 cut(s) | 1269, 1401, 1464 |
| AcsI | RAATTY | 1 cut(s) | 505 |
| AcuI | CTGAAG | 1 cut(s) | 1057 |
| AcvI | CACGTG | 1 cut(s) | 1751 |
| AcyI | GRCGYC | 4 cut(s) | 923, 1115, 1248, 1592 |
| AfaI | GTAC | 4 cut(s) | 98, 233, 524, 1666 |
| AflIII | ACRYGT | 2 cut(s) | 1300, 1554 |
| AgsI | TTSAA | 6 cut(s) | 437, 1478, 1486, 1504, 1561, 1862 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 184, 1609, 1803 |
| AjiI | CACGTC | 2 cut(s) | 1303, 1606 |
| AjnI | CCWGG | 2 cut(s) | 666, 1128 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 974, 1006 |
| AluBI | AGCT | 8 cut(s) | 160, 890, 1077, 1144, 1261, 1366, 1445, 1658 |
| AluI | AGCT | 8 cut(s) | 160, 890, 1077, 1144, 1261, 1366, 1445, 1658 |
| Alw21I | GWGCWC | 2 cut(s) | 1146, 1457 |
| Alw26I | GTCTC | 8 cut(s) | 560, 627, 677, 744, 1169, 1189, 1309, 1790 |
| AlwI | GGATC | 3 cut(s) | 326, 495, 1290 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1735 |
| Ama87I | CYCGRG | 3 cut(s) | 1539, 1776, 1815 |
| ApaI | GGGCCC | 2 cut(s) | 1049, 1540 |
| ApoI | RAATTY | 1 cut(s) | 505 |
| AspA2I | CCTAGG | 1 cut(s) | 109 |
| AsuC2I | CCSGG | 7 cut(s) | 46, 447, 1540, 1541, 1628, 1777, 1778 |
| AsuHPI | GGTGA | 7 cut(s) | 613, 644, 730, 761, 775, 1247, 1436 |
| AsuNHI | GCTAGC | 1 cut(s) | 535 |
| AvaI | CYCGRG | 3 cut(s) | 1539, 1776, 1815 |
| AvaII | GGWCC | 6 cut(s) | 201, 663, 771, 862, 1710, 1821 |
| AvrII | CCTAGG | 1 cut(s) | 109 |
| BaeGI | GKGCMC | 2 cut(s) | 1049, 1540 |
| BanI | GGYRCC | 3 cut(s) | 922, 1571, 1787 |
| BanII | GRGCYC | 3 cut(s) | 1049, 1146, 1540 |
| BbrPI | CACGTG | 1 cut(s) | 1751 |
| BbsI | GAAGAC | 1 cut(s) | 1514 |
| Bbv12I | GWGCWC | 2 cut(s) | 1146, 1457 |
| BbvCI | CCTCAGC | 1 cut(s) | 1446 |
| BccI | CCATC | 5 cut(s) | 478, 632, 1008, 1280, 1393 |
| BceAI | ACGGC | 5 cut(s) | 5, 914, 1594, 1801, 1841 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 285, 319, 1825, 1859 |
| BciT130I | CCWGG | 2 cut(s) | 668, 1130 |
| BcnI | CCSGG | 7 cut(s) | 46, 447, 1540, 1541, 1628, 1777, 1778 |
| BcoDI | GTCTC | 8 cut(s) | 560, 627, 677, 744, 1169, 1189, 1309, 1790 |
| BfaI | CTAG | 2 cut(s) | 110, 536 |
| BfmI | CTRYAG | 3 cut(s) | 648, 1334, 1659 |
| BfoI | RGCGCY | 6 cut(s) | 109, 155, 578, 695, 797, 926 |
| BfuAI | ACCTGC | 1 cut(s) | 399 |
| BlnI | CCTAGG | 1 cut(s) | 109 |
| BlpI | GCTNAGC | 2 cut(s) | 578, 695 |
| Bme1390I | CCNGG | 9 cut(s) | 46, 447, 668, 1130, 1540, 1541, 1628, 1777, 1778 |
| Bme18I | GGWCC | 6 cut(s) | 201, 663, 771, 862, 1710, 1821 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 184, 1609, 1803 |
| BmeT110I | CYCGRG | 3 cut(s) | 1539, 1776, 1815 |
| BmgBI | CACGTC | 2 cut(s) | 1303, 1606 |
| BmrFI | CCNGG | 9 cut(s) | 46, 447, 668, 1130, 1540, 1541, 1628, 1777, 1778 |
| BmrI | ACTGGG | 1 cut(s) | 1797 |
| BmsI | GCATC | 5 cut(s) | 594, 600, 711, 717, 745 |
| BmtI | GCTAGC | 1 cut(s) | 539 |
| BmuI | ACTGGG | 1 cut(s) | 1797 |
| BpiI | GAAGAC | 1 cut(s) | 1514 |
| BpmI | CTGGAG | 4 cut(s) | 818, 1151, 1307, 1784 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1145, 1446 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 578, 695 |
| BpuEI | CTTGAG | 1 cut(s) | 154 |
| BpuMI | CCSGG | 7 cut(s) | 46, 447, 1540, 1541, 1628, 1777, 1778 |
| BsaAI | YACGTR | 2 cut(s) | 100, 1751 |
| BsaHI | GRCGYC | 4 cut(s) | 923, 1115, 1248, 1592 |
| BsaI | GGTCTC | 2 cut(s) | 1169, 1790 |
| BsaWI | WCCGGW | 2 cut(s) | 595, 712 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 506, 536, 974, 1004 |
| Bse118I | RCCGGY | 2 cut(s) | 141, 810 |
| Bse1I | ACTGG | 9 cut(s) | 197, 373, 583, 619, 700, 736, 1203, 1224, 1803 |
| BseBI | CCWGG | 2 cut(s) | 668, 1130 |
| BseGI | GGATG | 3 cut(s) | 1272, 1404, 1696 |
| BseMII | CTCAG | 8 cut(s) | 270, 555, 569, 672, 686, 1159, 1430, 1437 |
| BseNI | ACTGG | 9 cut(s) | 197, 373, 583, 619, 700, 736, 1203, 1224, 1803 |
| BseRI | GAGGAG | 1 cut(s) | 431 |
| BseSI | GKGCMC | 2 cut(s) | 1049, 1540 |
| BseX3I | CGGCCG | 1 cut(s) | 1464 |
| BseYI | CCCAGC | 6 cut(s) | 543, 1015, 1417, 1654, 1713, 1725 |
| BsgI | GTGCAG | 1 cut(s) | 1397 |
| Bsh1236I | CGCG | 6 cut(s) | 309, 465, 760, 1254, 1328, 1847 |
| Bsh1285I | CGRYCG | 3 cut(s) | 1467, 1617, 1845 |
| BshNI | GGYRCC | 3 cut(s) | 922, 1571, 1787 |
| BsiEI | CGRYCG | 3 cut(s) | 1467, 1617, 1845 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1146, 1457 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1539, 1776, 1815 |
| BslFI | GGGAC | 6 cut(s) | 191, 214, 676, 1230, 1610, 1696 |
| BsmAI | GTCTC | 8 cut(s) | 560, 627, 677, 744, 1169, 1189, 1309, 1790 |
| BsmBI | CGTCTC | 1 cut(s) | 1309 |
| BsmFI | GGGAC | 6 cut(s) | 191, 214, 676, 1230, 1610, 1696 |
| BsmI | GAATGC | 2 cut(s) | 253, 1481 |
| Bso31I | GGTCTC | 2 cut(s) | 1169, 1790 |
| BsoBI | CYCGRG | 3 cut(s) | 1539, 1776, 1815 |
| Bsp120I | GGGCCC | 2 cut(s) | 1045, 1536 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1049, 1146, 1457, 1540 |
| Bsp143I | GATC | 9 cut(s) | 162, 242, 318, 487, 937, 1282, 1323, 1825, 1838 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 578, 695 |
| Bsp68I | TCGCGA | 1 cut(s) | 465 |
| BspCNI | CTCAG | 8 cut(s) | 271, 556, 570, 673, 687, 1158, 1431, 1438 |
| BspFNI | CGCG | 6 cut(s) | 309, 465, 760, 1254, 1328, 1847 |
| BspHI | TCATGA | 1 cut(s) | 969 |
| BspMAI | CTGCAG | 1 cut(s) | 1338 |
| BspMI | ACCTGC | 1 cut(s) | 399 |
| BspOI | GCTAGC | 1 cut(s) | 539 |
| BspPI | GGATC | 3 cut(s) | 326, 495, 1290 |
| BspQI | GCTCTTC | 1 cut(s) | 1134 |
| BspT107I | GGYRCC | 3 cut(s) | 922, 1571, 1787 |
| BspTNI | GGTCTC | 2 cut(s) | 1169, 1790 |
| BsrBI | CCGCTC | 4 cut(s) | 985, 1012, 1213, 1342 |
| BsrFI | RCCGGY | 2 cut(s) | 141, 810 |
| BsrI | ACTGG | 9 cut(s) | 197, 373, 583, 619, 700, 736, 1203, 1224, 1803 |
| BssAI | RCCGGY | 2 cut(s) | 141, 810 |
| BssMI | GATC | 9 cut(s) | 162, 242, 318, 487, 937, 1282, 1323, 1825, 1838 |
| BssNI | GRCGYC | 4 cut(s) | 923, 1115, 1248, 1592 |
| BssT1I | CCWWGG | 2 cut(s) | 109, 118 |
| Bst2UI | CCWGG | 2 cut(s) | 668, 1130 |
| Bst4CI | ACNGT | 4 cut(s) | 64, 224, 553, 652 |
| Bst6I | CTCTTC | 4 cut(s) | 294, 831, 840, 1134 |
| BstACI | GRCGYC | 4 cut(s) | 923, 1115, 1248, 1592 |
| BstBAI | YACGTR | 2 cut(s) | 100, 1751 |
| BstDSI | CCRYGG | 2 cut(s) | 63, 1252 |
| BstEII | GGTNACC | 1 cut(s) | 1429 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1739 |
| BstF5I | GGATG | 3 cut(s) | 1272, 1404, 1696 |
| BstFNI | CGCG | 6 cut(s) | 309, 465, 760, 1254, 1328, 1847 |
| BstH2I | RGCGCY | 6 cut(s) | 109, 155, 578, 695, 797, 926 |
| BstKTI | GATC | 9 cut(s) | 165, 245, 321, 490, 940, 1285, 1326, 1828, 1841 |
| BstMAI | GTCTC | 8 cut(s) | 560, 627, 677, 744, 1169, 1189, 1309, 1790 |
| BstMBI | GATC | 9 cut(s) | 162, 242, 318, 487, 937, 1282, 1323, 1825, 1838 |
| BstMCI | CGRYCG | 3 cut(s) | 1467, 1617, 1845 |
| BstNI | CCWGG | 2 cut(s) | 668, 1130 |
| BstNSI | RCATGY | 1 cut(s) | 1558 |
| BstPI | GGTNACC | 1 cut(s) | 1429 |
| BstSCI | CCNGG | 9 cut(s) | 44, 445, 666, 1128, 1538, 1539, 1626, 1775, 1776 |
| BstSFI | CTRYAG | 3 cut(s) | 648, 1334, 1659 |
| BstSLI | GKGCMC | 2 cut(s) | 1049, 1540 |
| BstUI | CGCG | 6 cut(s) | 309, 465, 760, 1254, 1328, 1847 |
| BstV2I | GAAGAC | 1 cut(s) | 1514 |
| BstX2I | RGATCY | 1 cut(s) | 1282 |
| BstYI | RGATCY | 1 cut(s) | 1282 |
| BstZI | CGGCCG | 1 cut(s) | 1464 |
| BtgI | CCRYGG | 2 cut(s) | 63, 1252 |
| BtgZI | GCGATG | 1 cut(s) | 497 |
| BtrI | CACGTC | 2 cut(s) | 1303, 1606 |
| BtsCI | GGATG | 3 cut(s) | 1272, 1404, 1696 |
| BtsI | GCAGTG | 1 cut(s) | 912 |
| BtsIMutI | CAGTG | 4 cut(s) | 657, 912, 940, 1511 |
| BtuMI | TCGCGA | 1 cut(s) | 465 |
| BveI | ACCTGC | 1 cut(s) | 399 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1735 |
| CciI | TCATGA | 1 cut(s) | 969 |
| CciNI | GCGGCCGC | 1 cut(s) | 1464 |
| Cfr10I | RCCGGY | 2 cut(s) | 141, 810 |
| Cfr42I | CCGCGG | 1 cut(s) | 1255 |
| Cfr9I | CCCGGG | 2 cut(s) | 1539, 1776 |
| CseI | GACGC | 5 cut(s) | 476, 882, 1104, 1256, 1581 |
| Csp6I | GTAC | 4 cut(s) | 97, 232, 523, 1665 |
| CviAII | CATG | 3 cut(s) | 520, 970, 1555 |
| CviQI | GTAC | 4 cut(s) | 97, 232, 523, 1665 |
| DinI | GGCGCC | 1 cut(s) | 924 |
| DpnI | GATC | 9 cut(s) | 164, 244, 320, 489, 939, 1284, 1325, 1827, 1840 |
| DpnII | GATC | 9 cut(s) | 162, 242, 318, 487, 937, 1282, 1323, 1825, 1838 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1708 |
| DriI | GACNNNNNGTC | 3 cut(s) | 184, 1609, 1803 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1708 |
| EaeI | YGGCCR | 3 cut(s) | 1269, 1401, 1464 |
| EagI | CGGCCG | 1 cut(s) | 1464 |
| Eam1104I | CTCTTC | 4 cut(s) | 294, 831, 840, 1134 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 184, 1609, 1803 |
| EarI | CTCTTC | 4 cut(s) | 294, 831, 840, 1134 |
| Ecl136II | GAGCTC | 1 cut(s) | 1144 |
| EclXI | CGGCCG | 1 cut(s) | 1464 |
| Eco130I | CCWWGG | 2 cut(s) | 109, 118 |
| Eco24I | GRGCYC | 3 cut(s) | 1049, 1146, 1540 |
| Eco31I | GGTCTC | 2 cut(s) | 1169, 1790 |
| Eco47I | GGWCC | 6 cut(s) | 201, 663, 771, 862, 1710, 1821 |
| Eco52I | CGGCCG | 1 cut(s) | 1464 |
| Eco53kI | GAGCTC | 1 cut(s) | 1144 |
| Eco57I | CTGAAG | 1 cut(s) | 1057 |
| Eco72I | CACGTG | 1 cut(s) | 1751 |
| Eco88I | CYCGRG | 3 cut(s) | 1539, 1776, 1815 |
| Eco91I | GGTNACC | 1 cut(s) | 1429 |
| EcoICRI | GAGCTC | 1 cut(s) | 1144 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1739 |
| EcoO109I | RGGNCCY | 5 cut(s) | 56, 201, 663, 1536, 1710 |
| EcoO65I | GGTNACC | 1 cut(s) | 1429 |
| EcoRII | CCWGG | 2 cut(s) | 666, 1128 |
| EcoT14I | CCWWGG | 2 cut(s) | 109, 118 |
| EcoT38I | GRGCYC | 3 cut(s) | 1049, 1146, 1540 |
| EgeI | GGCGCC | 1 cut(s) | 924 |
| EheI | GGCGCC | 1 cut(s) | 924 |
| ErhI | CCWWGG | 2 cut(s) | 109, 118 |
| Esp3I | CGTCTC | 1 cut(s) | 1309 |
| FaeI | CATG | 3 cut(s) | 523, 973, 1558 |
| FaiI | YATR | 9 cut(s) | 521, 960, 971, 1040, 1103, 1242, 1373, 1556, 1793 |
| FaqI | GGGAC | 6 cut(s) | 191, 214, 676, 1230, 1610, 1696 |
| FatI | CATG | 3 cut(s) | 519, 969, 1554 |
| FblI | GTMKAC | 1 cut(s) | 387 |
| FokI | GGATG | 3 cut(s) | 1259, 1411, 1683 |
| FriOI | GRGCYC | 3 cut(s) | 1049, 1146, 1540 |
| FspBI | CTAG | 2 cut(s) | 110, 536 |
| GsaI | CCCAGC | 6 cut(s) | 547, 1019, 1421, 1658, 1717, 1729 |
| GsuI | CTGGAG | 4 cut(s) | 818, 1151, 1307, 1784 |
| HaeII | RGCGCY | 6 cut(s) | 109, 155, 578, 695, 797, 926 |
| HgaI | GACGC | 5 cut(s) | 476, 882, 1104, 1256, 1581 |
| Hin1I | GRCGYC | 4 cut(s) | 923, 1115, 1248, 1592 |
| Hin1II | CATG | 3 cut(s) | 523, 973, 1558 |
| HincII | GTYRAC | 1 cut(s) | 388 |
| HindII | GTYRAC | 1 cut(s) | 388 |
| HindIII | AAGCTT | 1 cut(s) | 1259 |
| HinfI | GANTC | 8 cut(s) | 136, 169, 179, 419, 460, 821, 944, 1385 |
| HphI | GGTGA | 7 cut(s) | 613, 644, 730, 761, 775, 1247, 1436 |
| Hpy166II | GTNNAC | 6 cut(s) | 25, 97, 130, 388, 559, 676 |
| Hpy188I | TCNGA | 8 cut(s) | 280, 589, 706, 1160, 1701, 1741, 1809, 1825 |
| Hpy8I | GTNNAC | 6 cut(s) | 25, 97, 130, 388, 559, 676 |
| Hpy99I | CGWCG | 6 cut(s) | 224, 470, 898, 1615, 1705, 1787 |
| HpyAV | CCTTC | 9 cut(s) | 214, 248, 472, 871, 892, 958, 971, 1081, 1561 |
| HpyCH4III | ACNGT | 4 cut(s) | 64, 224, 553, 652 |
| HpyCH4IV | ACGT | 4 cut(s) | 99, 1302, 1605, 1750 |
| HpyCH4V | TGCA | 4 cut(s) | 655, 905, 1336, 1378 |
| HpySE526I | ACGT | 4 cut(s) | 99, 1302, 1605, 1750 |
| Hsp92I | GRCGYC | 4 cut(s) | 923, 1115, 1248, 1592 |
| Hsp92II | CATG | 3 cut(s) | 523, 973, 1558 |
| KasI | GGCGCC | 1 cut(s) | 922 |
| KflI | GGGWCCC | 2 cut(s) | 663, 1710 |
| KroI | GCCGGC | 2 cut(s) | 141, 810 |
| KroNI | GCCGGC | 2 cut(s) | 143, 812 |
| KspI | CCGCGG | 1 cut(s) | 1255 |
| Kzo9I | GATC | 9 cut(s) | 162, 242, 318, 487, 937, 1282, 1323, 1825, 1838 |
| LguI | GCTCTTC | 1 cut(s) | 1134 |
| LmnI | GCTCC | 6 cut(s) | 149, 410, 982, 1315, 1339, 1452 |
| LweI | GCATC | 5 cut(s) | 594, 600, 711, 717, 745 |
| MaeI | CTAG | 2 cut(s) | 110, 536 |
| MaeII | ACGT | 4 cut(s) | 99, 1302, 1605, 1750 |
| MaeIII | GTNAC | 4 cut(s) | 763, 1429, 1593, 1746 |
| MalI | GATC | 9 cut(s) | 164, 244, 320, 489, 939, 1284, 1325, 1827, 1840 |
| MbiI | CCGCTC | 4 cut(s) | 985, 1012, 1213, 1342 |
| MboI | GATC | 9 cut(s) | 162, 242, 318, 487, 937, 1282, 1323, 1825, 1838 |
| MboII | GAAGA | 8 cut(s) | 311, 647, 764, 848, 854, 857, 1151, 1519 |
| MfeI | CAATTG | 1 cut(s) | 1056 |
| MflI | RGATCY | 1 cut(s) | 1282 |
| MhlI | GDGCHC | 4 cut(s) | 1049, 1146, 1457, 1540 |
| MluCI | AATT | 3 cut(s) | 505, 1056, 1091 |
| Mly113I | GGCGCC | 1 cut(s) | 923 |
| MlyI | GAGTC | 7 cut(s) | 145, 173, 428, 469, 815, 938, 1394 |
| MmeI | TCCRAC | 5 cut(s) | 310, 1293, 1719, 1724, 1832 |
| MroNI | GCCGGC | 2 cut(s) | 141, 810 |
| MseI | TTAA | 3 cut(s) | 273, 1263, 1587 |
| MslI | CAYNNNNRTG | 3 cut(s) | 630, 747, 1373 |
| MspA1I | CMGCKG | 7 cut(s) | 776, 1254, 1460, 1469, 1658, 1680, 1887 |
| MspR9I | CCNGG | 9 cut(s) | 46, 447, 668, 1130, 1540, 1541, 1628, 1777, 1778 |
| MunI | CAATTG | 1 cut(s) | 1056 |
| Mva1269I | GAATGC | 2 cut(s) | 253, 1481 |
| MvaI | CCWGG | 2 cut(s) | 668, 1130 |
| MvnI | CGCG | 6 cut(s) | 309, 465, 760, 1254, 1328, 1847 |
| NaeI | GCCGGC | 2 cut(s) | 143, 812 |
| NarI | GGCGCC | 1 cut(s) | 923 |
| NciI | CCSGG | 7 cut(s) | 46, 447, 1540, 1541, 1628, 1777, 1778 |
| NdeII | GATC | 9 cut(s) | 162, 242, 318, 487, 937, 1282, 1323, 1825, 1838 |
| NgoMIV | GCCGGC | 2 cut(s) | 141, 810 |
| NheI | GCTAGC | 1 cut(s) | 535 |
| NlaIII | CATG | 3 cut(s) | 523, 973, 1558 |
| NmeAIII | GCCGAG | 4 cut(s) | 553, 856, 979, 1058 |
| NmuCI | GTSAC | 3 cut(s) | 763, 1593, 1746 |
| NotI | GCGGCCGC | 1 cut(s) | 1464 |
| NruI | TCGCGA | 1 cut(s) | 465 |
| NspI | RCATGY | 1 cut(s) | 1558 |
| PagI | TCATGA | 1 cut(s) | 969 |
| PciI | ACATGT | 1 cut(s) | 1554 |
| PciSI | GCTCTTC | 1 cut(s) | 1134 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1104 |
| PctI | GAATGC | 2 cut(s) | 253, 1481 |
| PdiI | GCCGGC | 2 cut(s) | 143, 812 |
| PfeI | GAWTC | 1 cut(s) | 169 |
| PflFI | GACNNNGTC | 1 cut(s) | 1735 |
| PleI | GAGTC | 7 cut(s) | 144, 173, 427, 468, 815, 938, 1393 |
| PluTI | GGCGCC | 1 cut(s) | 926 |
| PmaCI | CACGTG | 1 cut(s) | 1751 |
| PmlI | CACGTG | 1 cut(s) | 1751 |
| PpsI | GAGTC | 7 cut(s) | 144, 173, 427, 468, 815, 938, 1393 |
| Ppu21I | YACGTR | 2 cut(s) | 100, 1751 |
| PpuMI | RGGWCCY | 3 cut(s) | 201, 663, 1710 |
| PscI | ACATGT | 1 cut(s) | 1554 |
| Psp124BI | GAGCTC | 1 cut(s) | 1146 |
| Psp5II | RGGWCCY | 3 cut(s) | 201, 663, 1710 |
| Psp6I | CCWGG | 2 cut(s) | 666, 1128 |
| PspCI | CACGTG | 1 cut(s) | 1751 |
| PspEI | GGTNACC | 1 cut(s) | 1429 |
| PspFI | CCCAGC | 6 cut(s) | 543, 1015, 1417, 1654, 1713, 1725 |
| PspGI | CCWGG | 2 cut(s) | 666, 1128 |
| PspOMI | GGGCCC | 2 cut(s) | 1045, 1536 |
| PspPPI | RGGWCCY | 3 cut(s) | 201, 663, 1710 |
| PstI | CTGCAG | 1 cut(s) | 1338 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1735 |
| PsuI | RGATCY | 1 cut(s) | 1282 |
| PsyI | GACNNNGTC | 1 cut(s) | 1735 |
| PvuII | CAGCTG | 1 cut(s) | 1658 |
| RruI | TCGCGA | 1 cut(s) | 465 |
| RsaI | GTAC | 4 cut(s) | 98, 233, 524, 1666 |
| RsaNI | GTAC | 4 cut(s) | 97, 232, 523, 1665 |
| RseI | CAYNNNNRTG | 3 cut(s) | 630, 747, 1373 |
| SacI | GAGCTC | 1 cut(s) | 1146 |
| SacII | CCGCGG | 1 cut(s) | 1255 |
| SalI | GTCGAC | 1 cut(s) | 386 |
| SapI | GCTCTTC | 1 cut(s) | 1134 |
| SaqAI | TTAA | 3 cut(s) | 273, 1263, 1587 |
| Sau3AI | GATC | 9 cut(s) | 162, 242, 318, 487, 937, 1282, 1323, 1825, 1838 |
| SchI | GAGTC | 7 cut(s) | 145, 173, 428, 469, 815, 938, 1394 |
| ScrFI | CCNGG | 9 cut(s) | 46, 447, 668, 1130, 1540, 1541, 1628, 1777, 1778 |
| SduI | GDGCHC | 4 cut(s) | 1049, 1146, 1457, 1540 |
| SfaNI | GCATC | 5 cut(s) | 594, 600, 711, 717, 745 |
| SfcI | CTRYAG | 3 cut(s) | 648, 1334, 1659 |
| SfoI | GGCGCC | 1 cut(s) | 924 |
| Sfr303I | CCGCGG | 1 cut(s) | 1255 |
| SgrBI | CCGCGG | 1 cut(s) | 1255 |
| SinI | GGWCC | 6 cut(s) | 201, 663, 771, 862, 1710, 1821 |
| SmaI | CCCGGG | 2 cut(s) | 1541, 1778 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 630, 747, 1373 |
| SmlI | CTYRAG | 1 cut(s) | 133 |
| SmoI | CTYRAG | 1 cut(s) | 133 |
| SrfI | GCCCGGGC | 1 cut(s) | 1541 |
| Sse9I | AATT | 3 cut(s) | 505, 1056, 1091 |
| SspDI | GGCGCC | 1 cut(s) | 922 |
| SspI | AATATT | 1 cut(s) | 1549 |
| SspMI | CTAG | 2 cut(s) | 110, 536 |
| SstI | GAGCTC | 1 cut(s) | 1146 |
| StyD4I | CCNGG | 9 cut(s) | 44, 445, 666, 1128, 1538, 1539, 1626, 1775, 1776 |
| StyI | CCWWGG | 2 cut(s) | 109, 118 |
| TaaI | ACNGT | 4 cut(s) | 64, 224, 553, 652 |
| TaiI | ACGT | 4 cut(s) | 102, 1305, 1608, 1753 |
| TaqI | TCGA | 8 cut(s) | 165, 245, 295, 387, 458, 896, 1209, 1617 |
| TaqII | GACCGA | 3 cut(s) | 1532, 1603, 1831 |
| TasI | AATT | 3 cut(s) | 505, 1056, 1091 |
| TfiI | GAWTC | 1 cut(s) | 169 |
| Tru1I | TTAA | 3 cut(s) | 273, 1263, 1587 |
| Tru9I | TTAA | 3 cut(s) | 273, 1263, 1587 |
| TscAI | CASTG | 4 cut(s) | 657, 912, 940, 1518 |
| TseFI | GTSAC | 3 cut(s) | 763, 1593, 1746 |
| Tsp45I | GTSAC | 3 cut(s) | 763, 1593, 1746 |
| TspDTI | ATGAA | 3 cut(s) | 958, 1311, 1424 |
| TspMI | CCCGGG | 2 cut(s) | 1539, 1776 |
| TspRI | CASTG | 4 cut(s) | 657, 912, 940, 1518 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1735 |
| VpaK11BI | GGWCC | 6 cut(s) | 201, 663, 771, 862, 1710, 1821 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1739 |
| XapI | RAATTY | 1 cut(s) | 505 |
| XceI | RCATGY | 1 cut(s) | 1558 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 626, 743 |
| XmaI | CCCGGG | 2 cut(s) | 1539, 1776 |
| XmaJI | CCTAGG | 1 cut(s) | 109 |
| XmiI | GTMKAC | 1 cut(s) | 387 |
| XspI | CTAG | 2 cut(s) | 110, 536 |