No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 73 |
| Acc36I | ACCTGC | 1 cut(s) | 73 |
| AccB1I | GGYRCC | 2 cut(s) | 40, 516 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 304 |
| AccBSI | CCGCTC | 2 cut(s) | 514, 592 |
| AccI | GTMKAC | 1 cut(s) | 159 |
| AccII | CGCG | 2 cut(s) | 509, 555 |
| AclWI | GGATC | 2 cut(s) | 335, 471 |
| AcoI | YGGCCR | 2 cut(s) | 174, 570 |
| AcuI | CTGAAG | 1 cut(s) | 251 |
| AcyI | GRCGYC | 2 cut(s) | 41, 517 |
| AfaI | GTAC | 1 cut(s) | 584 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 18, 69, 86, 304, 526, 637 |
| AgsI | TTSAA | 2 cut(s) | 313, 350 |
| AjiI | CACGTC | 1 cut(s) | 163 |
| AjnI | CCWGG | 2 cut(s) | 11, 429 |
| AluBI | AGCT | 6 cut(s) | 366, 445, 478, 498, 562, 613 |
| AluI | AGCT | 6 cut(s) | 366, 445, 478, 498, 562, 613 |
| Alw26I | GTCTC | 2 cut(s) | 479, 610 |
| AlwI | GGATC | 2 cut(s) | 335, 471 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 430 |
| AoxI | GGCC | 4 cut(s) | 174, 251, 570, 627 |
| ApeKI | GCWGC | 4 cut(s) | 139, 413, 424, 442 |
| AspLEI | GCGC | 3 cut(s) | 43, 336, 519 |
| AspS9I | GGNCC | 3 cut(s) | 196, 251, 628 |
| AsuHPI | GGTGA | 1 cut(s) | 348 |
| AvaII | GGWCC | 1 cut(s) | 196 |
| BanI | GGYRCC | 2 cut(s) | 40, 516 |
| BbsI | GAAGAC | 1 cut(s) | 239 |
| BbvI | GCAGC | 4 cut(s) | 151, 425, 436, 454 |
| BccI | CCATC | 1 cut(s) | 451 |
| BceAI | ACGGC | 3 cut(s) | 89, 282, 557 |
| BciT130I | CCWGG | 2 cut(s) | 13, 431 |
| BciVI | GTATCC | 1 cut(s) | 178 |
| BcoDI | GTCTC | 2 cut(s) | 479, 610 |
| BfaI | CTAG | 1 cut(s) | 614 |
| BfmI | CTRYAG | 2 cut(s) | 240, 361 |
| BfoI | RGCGCY | 2 cut(s) | 44, 520 |
| BfuAI | ACCTGC | 1 cut(s) | 73 |
| BfuI | GTATCC | 1 cut(s) | 178 |
| BisI | GCNGC | 8 cut(s) | 80, 140, 174, 414, 425, 443, 515, 556 |
| BlpI | GCTNAGC | 2 cut(s) | 270, 367 |
| BlsI | GCNGC | 8 cut(s) | 81, 141, 175, 415, 426, 444, 516, 557 |
| Bme1390I | CCNGG | 2 cut(s) | 13, 431 |
| Bme18I | GGWCC | 1 cut(s) | 196 |
| BmgBI | CACGTC | 1 cut(s) | 163 |
| BmgT120I | GGNCC | 3 cut(s) | 196, 251, 628 |
| BmiI | GGNNCC | 6 cut(s) | 42, 54, 78, 197, 225, 518 |
| BmrFI | CCNGG | 2 cut(s) | 13, 431 |
| BmsI | GCATC | 2 cut(s) | 160, 538 |
| BoxI | GACNNNNGTC | 1 cut(s) | 382 |
| BpiI | GAAGAC | 1 cut(s) | 239 |
| BpmI | CTGGAG | 3 cut(s) | 95, 341, 452 |
| Bpu10I | CCTNAGC | 1 cut(s) | 446 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 270, 367 |
| BsaAI | YACGTR | 1 cut(s) | 586 |
| BsaHI | GRCGYC | 2 cut(s) | 41, 517 |
| BsaJI | CCNNGG | 3 cut(s) | 48, 429, 525 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 590, 620 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 18, 69, 86, 304, 526, 637 |
| Bse1I | ACTGG | 1 cut(s) | 56 |
| Bse3DI | GCAATG | 1 cut(s) | 63 |
| BseBI | CCWGG | 2 cut(s) | 13, 431 |
| BseDI | CCNNGG | 3 cut(s) | 48, 429, 525 |
| BseGI | GGATG | 1 cut(s) | 172 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 18, 69, 86, 304, 526, 637 |
| BseMI | GCAATG | 1 cut(s) | 63 |
| BseMII | CTCAG | 3 cut(s) | 261, 381, 460 |
| BseNI | ACTGG | 1 cut(s) | 56 |
| BseRI | GAGGAG | 1 cut(s) | 467 |
| BseX3I | CGGCCG | 1 cut(s) | 174 |
| BseXI | GCAGC | 4 cut(s) | 151, 425, 436, 454 |
| BseYI | CCCAGC | 1 cut(s) | 248 |
| Bsh1236I | CGCG | 2 cut(s) | 509, 555 |
| Bsh1285I | CGRYCG | 1 cut(s) | 177 |
| BshFI | GGCC | 4 cut(s) | 176, 253, 572, 629 |
| BshNI | GGYRCC | 2 cut(s) | 40, 516 |
| BsiEI | CGRYCG | 1 cut(s) | 177 |
| BsiSI | CCGG | 1 cut(s) | 254 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 18, 69, 86, 304, 526, 637 |
| BsmAI | GTCTC | 2 cut(s) | 479, 610 |
| BsnI | GGCC | 4 cut(s) | 176, 253, 572, 629 |
| Bsp143I | GATC | 2 cut(s) | 327, 463 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 270, 367 |
| BspANI | GGCC | 4 cut(s) | 176, 253, 572, 629 |
| BspCNI | CTCAG | 3 cut(s) | 262, 380, 459 |
| BspFNI | CGCG | 2 cut(s) | 509, 555 |
| BspLI | GGNNCC | 6 cut(s) | 42, 54, 78, 197, 225, 518 |
| BspMI | ACCTGC | 1 cut(s) | 73 |
| BspPI | GGATC | 2 cut(s) | 335, 471 |
| BspT107I | GGYRCC | 2 cut(s) | 40, 516 |
| BsrBI | CCGCTC | 2 cut(s) | 514, 592 |
| BsrDI | GCAATG | 1 cut(s) | 63 |
| BsrI | ACTGG | 1 cut(s) | 56 |
| BssECI | CCNNGG | 3 cut(s) | 48, 429, 525 |
| BssMI | GATC | 2 cut(s) | 327, 463 |
| BssNI | GRCGYC | 2 cut(s) | 41, 517 |
| BssT1I | CCWWGG | 2 cut(s) | 48, 525 |
| Bst2UI | CCWGG | 2 cut(s) | 13, 431 |
| Bst4CI | ACNGT | 4 cut(s) | 241, 303, 354, 582 |
| BstACI | GRCGYC | 2 cut(s) | 41, 517 |
| BstBAI | YACGTR | 1 cut(s) | 586 |
| BstC8I | GCNNGC | 4 cut(s) | 222, 480, 553, 560 |
| BstDEI | CTNAG | 4 cut(s) | 270, 367, 446, 489 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 524, 635 |
| BstF5I | GGATG | 1 cut(s) | 172 |
| BstFNI | CGCG | 2 cut(s) | 509, 555 |
| BstH2I | RGCGCY | 2 cut(s) | 44, 520 |
| BstHHI | GCGC | 3 cut(s) | 43, 336, 519 |
| BstKTI | GATC | 2 cut(s) | 330, 466 |
| BstMAI | GTCTC | 2 cut(s) | 479, 610 |
| BstMBI | GATC | 2 cut(s) | 327, 463 |
| BstMCI | CGRYCG | 1 cut(s) | 177 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 79, 136, 259 |
| BstNI | CCWGG | 2 cut(s) | 13, 431 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 382 |
| BstSCI | CCNGG | 2 cut(s) | 11, 429 |
| BstSFI | CTRYAG | 2 cut(s) | 240, 361 |
| BstUI | CGCG | 2 cut(s) | 509, 555 |
| BstV1I | GCAGC | 4 cut(s) | 151, 425, 436, 454 |
| BstV2I | GAAGAC | 1 cut(s) | 239 |
| BstX2I | RGATCY | 1 cut(s) | 463 |
| BstYI | RGATCY | 1 cut(s) | 463 |
| BstZI | CGGCCG | 1 cut(s) | 174 |
| BsuI | GTATCC | 1 cut(s) | 178 |
| BsuRI | GGCC | 4 cut(s) | 176, 253, 572, 629 |
| BtrI | CACGTC | 1 cut(s) | 163 |
| BtsCI | GGATG | 1 cut(s) | 172 |
| BtsIMutI | CAGTG | 3 cut(s) | 63, 209, 578 |
| BveI | ACCTGC | 1 cut(s) | 73 |
| Cac8I | GCNNGC | 4 cut(s) | 222, 480, 553, 560 |
| CaiI | CAGNNNCTG | 1 cut(s) | 430 |
| CfoI | GCGC | 3 cut(s) | 43, 336, 519 |
| Cfr13I | GGNCC | 3 cut(s) | 196, 251, 628 |
| CseI | GACGC | 1 cut(s) | 515 |
| Csp6I | GTAC | 1 cut(s) | 583 |
| CviAII | CATG | 5 cut(s) | 98, 117, 155, 398, 625 |
| CviQI | GTAC | 1 cut(s) | 583 |
| DdeI | CTNAG | 4 cut(s) | 270, 367, 446, 489 |
| DinI | GGCGCC | 2 cut(s) | 42, 518 |
| DpnI | GATC | 2 cut(s) | 329, 465 |
| DpnII | GATC | 2 cut(s) | 327, 463 |
| EaeI | YGGCCR | 2 cut(s) | 174, 570 |
| EagI | CGGCCG | 1 cut(s) | 174 |
| EciI | GGCGGA | 3 cut(s) | 449, 497, 518 |
| EclXI | CGGCCG | 1 cut(s) | 174 |
| Eco130I | CCWWGG | 2 cut(s) | 48, 525 |
| Eco32I | GATATC | 1 cut(s) | 94 |
| Eco47I | GGWCC | 1 cut(s) | 196 |
| Eco52I | CGGCCG | 1 cut(s) | 174 |
| Eco57I | CTGAAG | 1 cut(s) | 251 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 524, 635 |
| EcoRII | CCWGG | 2 cut(s) | 11, 429 |
| EcoRV | GATATC | 1 cut(s) | 94 |
| EcoT14I | CCWWGG | 2 cut(s) | 48, 525 |
| EgeI | GGCGCC | 2 cut(s) | 42, 518 |
| EheI | GGCGCC | 2 cut(s) | 42, 518 |
| ErhI | CCWWGG | 2 cut(s) | 48, 525 |
| FaeI | CATG | 5 cut(s) | 101, 120, 158, 401, 628 |
| FaiI | YATR | 7 cut(s) | 99, 118, 156, 363, 399, 603, 626 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 482, 514 |
| FatI | CATG | 5 cut(s) | 97, 116, 154, 397, 624 |
| FauI | CCCGC | 1 cut(s) | 61 |
| FblI | GTMKAC | 1 cut(s) | 159 |
| Fnu4HI | GCNGC | 8 cut(s) | 80, 140, 174, 414, 425, 443, 515, 556 |
| FokI | GGATG | 1 cut(s) | 179 |
| Fsp4HI | GCNGC | 8 cut(s) | 80, 140, 174, 414, 425, 443, 515, 556 |
| FspBI | CTAG | 1 cut(s) | 614 |
| GlaI | GCGC | 3 cut(s) | 42, 335, 518 |
| GluI | GCNGC | 8 cut(s) | 80, 140, 174, 414, 425, 443, 515, 556 |
| GsaI | CCCAGC | 1 cut(s) | 252 |
| GsuI | CTGGAG | 3 cut(s) | 95, 341, 452 |
| HaeII | RGCGCY | 2 cut(s) | 44, 520 |
| HaeIII | GGCC | 4 cut(s) | 176, 253, 572, 629 |
| HapII | CCGG | 1 cut(s) | 254 |
| HgaI | GACGC | 1 cut(s) | 515 |
| HhaI | GCGC | 3 cut(s) | 43, 336, 519 |
| Hin1I | GRCGYC | 2 cut(s) | 41, 517 |
| Hin1II | CATG | 5 cut(s) | 101, 120, 158, 401, 628 |
| Hin6I | GCGC | 3 cut(s) | 41, 334, 517 |
| HinP1I | GCGC | 3 cut(s) | 41, 334, 517 |
| HincII | GTYRAC | 1 cut(s) | 160 |
| HindII | GTYRAC | 1 cut(s) | 160 |
| HpaII | CCGG | 1 cut(s) | 254 |
| HphI | GGTGA | 1 cut(s) | 348 |
| Hpy166II | GTNNAC | 1 cut(s) | 160 |
| Hpy188III | TCNNGA | 1 cut(s) | 469 |
| Hpy8I | GTNNAC | 1 cut(s) | 160 |
| Hpy99I | CGWCG | 2 cut(s) | 110, 164 |
| HpyAV | CCTTC | 3 cut(s) | 22, 205, 631 |
| HpyCH4III | ACNGT | 4 cut(s) | 241, 303, 354, 582 |
| HpyCH4IV | ACGT | 2 cut(s) | 162, 585 |
| HpyCH4V | TGCA | 2 cut(s) | 262, 578 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 79, 136, 259 |
| HpyF3I | CTNAG | 4 cut(s) | 270, 367, 446, 489 |
| HpySE526I | ACGT | 2 cut(s) | 162, 585 |
| Hsp92I | GRCGYC | 2 cut(s) | 41, 517 |
| Hsp92II | CATG | 5 cut(s) | 101, 120, 158, 401, 628 |
| HspAI | GCGC | 3 cut(s) | 41, 334, 517 |
| KasI | GGCGCC | 2 cut(s) | 40, 516 |
| Kzo9I | GATC | 2 cut(s) | 327, 463 |
| LmnI | GCTCC | 6 cut(s) | 52, 76, 229, 475, 511, 589 |
| Lsp1109I | GCAGC | 4 cut(s) | 151, 425, 436, 454 |
| LweI | GCATC | 2 cut(s) | 160, 538 |
| MaeI | CTAG | 1 cut(s) | 614 |
| MaeII | ACGT | 2 cut(s) | 162, 585 |
| MaeIII | GTNAC | 3 cut(s) | 58, 112, 354 |
| MalI | GATC | 2 cut(s) | 329, 465 |
| MbiI | CCGCTC | 2 cut(s) | 514, 592 |
| MboI | GATC | 2 cut(s) | 327, 463 |
| MboII | GAAGA | 3 cut(s) | 220, 244, 277 |
| MflI | RGATCY | 1 cut(s) | 463 |
| Mly113I | GGCGCC | 2 cut(s) | 41, 517 |
| MseI | TTAA | 1 cut(s) | 23 |
| MspI | CCGG | 1 cut(s) | 254 |
| MspR9I | CCNGG | 2 cut(s) | 13, 431 |
| MvaI | CCWGG | 2 cut(s) | 13, 431 |
| MvnI | CGCG | 2 cut(s) | 509, 555 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 79, 136, 259 |
| NarI | GGCGCC | 2 cut(s) | 41, 517 |
| NdeII | GATC | 2 cut(s) | 327, 463 |
| NlaIII | CATG | 5 cut(s) | 101, 120, 158, 401, 628 |
| NlaIV | GGNNCC | 6 cut(s) | 42, 54, 78, 197, 225, 518 |
| NmuCI | GTSAC | 3 cut(s) | 58, 112, 354 |
| PaqCI | CACCTGC | 1 cut(s) | 73 |
| PflFI | GACNNNGTC | 2 cut(s) | 155, 602 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 304 |
| PkrI | GCNGC | 8 cut(s) | 81, 141, 175, 415, 426, 444, 516, 557 |
| PluTI | GGCGCC | 2 cut(s) | 44, 520 |
| Ppu21I | YACGTR | 1 cut(s) | 586 |
| PshAI | GACNNNNGTC | 1 cut(s) | 382 |
| Psp6I | CCWGG | 2 cut(s) | 11, 429 |
| PspFI | CCCAGC | 1 cut(s) | 248 |
| PspGI | CCWGG | 2 cut(s) | 11, 429 |
| PspN4I | GGNNCC | 6 cut(s) | 42, 54, 78, 197, 225, 518 |
| PspPI | GGNCC | 3 cut(s) | 196, 251, 628 |
| PstNI | CAGNNNCTG | 1 cut(s) | 430 |
| PsuI | RGATCY | 1 cut(s) | 463 |
| PsyI | GACNNNGTC | 2 cut(s) | 155, 602 |
| RsaI | GTAC | 1 cut(s) | 584 |
| RsaNI | GTAC | 1 cut(s) | 583 |
| SalI | GTCGAC | 1 cut(s) | 158 |
| SaqAI | TTAA | 1 cut(s) | 23 |
| SatI | GCNGC | 8 cut(s) | 80, 140, 174, 414, 425, 443, 515, 556 |
| Sau3AI | GATC | 2 cut(s) | 327, 463 |
| Sau96I | GGNCC | 3 cut(s) | 196, 251, 628 |
| ScrFI | CCNGG | 2 cut(s) | 13, 431 |
| SfaNI | GCATC | 2 cut(s) | 160, 538 |
| SfcI | CTRYAG | 2 cut(s) | 240, 361 |
| SfoI | GGCGCC | 2 cut(s) | 42, 518 |
| SinI | GGWCC | 1 cut(s) | 196 |
| SspDI | GGCGCC | 2 cut(s) | 40, 516 |
| SspMI | CTAG | 1 cut(s) | 614 |
| StyD4I | CCNGG | 2 cut(s) | 11, 429 |
| StyI | CCWWGG | 2 cut(s) | 48, 525 |
| TaaI | ACNGT | 4 cut(s) | 241, 303, 354, 582 |
| TaiI | ACGT | 2 cut(s) | 165, 588 |
| TaqI | TCGA | 2 cut(s) | 159, 288 |
| TauI | GCSGC | 4 cut(s) | 82, 176, 517, 558 |
| Tru1I | TTAA | 1 cut(s) | 23 |
| Tru9I | TTAA | 1 cut(s) | 23 |
| TscAI | CASTG | 3 cut(s) | 63, 209, 585 |
| TseFI | GTSAC | 3 cut(s) | 58, 112, 354 |
| TseI | GCWGC | 4 cut(s) | 139, 413, 424, 442 |
| Tsp45I | GTSAC | 3 cut(s) | 58, 112, 354 |
| TspDTI | ATGAA | 1 cut(s) | 271 |
| TspGWI | ACGGA | 1 cut(s) | 188 |
| TspRI | CASTG | 3 cut(s) | 63, 209, 585 |
| Tth111I | GACNNNGTC | 2 cut(s) | 155, 602 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 304 |
| VpaK11BI | GGWCC | 1 cut(s) | 196 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 524, 635 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 70, 427 |
| XmiI | GTMKAC | 1 cut(s) | 159 |
| XspI | CTAG | 1 cut(s) | 614 |