No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 705 |
| AatII | GACGTC | 1 cut(s) | 249 |
| AccB1I | GGYRCC | 3 cut(s) | 569, 661, 783 |
| AccBSI | CCGCTC | 4 cut(s) | 16, 211, 277, 668 |
| AccI | GTMKAC | 1 cut(s) | 243 |
| AccII | CGCG | 4 cut(s) | 76, 252, 461, 746 |
| AcoI | YGGCCR | 5 cut(s) | 129, 219, 267, 462, 612 |
| AcuI | CTGAAG | 3 cut(s) | 88, 465, 578 |
| AcyI | GRCGYC | 2 cut(s) | 246, 570 |
| AfaI | GTAC | 1 cut(s) | 622 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 276, 438, 439, 658, 703, 737 |
| AgsI | TTSAA | 2 cut(s) | 476, 484 |
| AjnI | CCWGG | 1 cut(s) | 757 |
| AluBI | AGCT | 3 cut(s) | 108, 217, 259 |
| AluI | AGCT | 3 cut(s) | 108, 217, 259 |
| Alw26I | GTCTC | 3 cut(s) | 167, 625, 786 |
| Ama87I | CYCGRG | 1 cut(s) | 772 |
| AoxI | GGCC | 6 cut(s) | 58, 129, 219, 267, 462, 612 |
| ApeKI | GCWGC | 5 cut(s) | 214, 331, 347, 376, 674 |
| AspLEI | GCGC | 5 cut(s) | 78, 572, 607, 691, 767 |
| AspS9I | GGNCC | 3 cut(s) | 535, 707, 817 |
| AsuC2I | CCSGG | 2 cut(s) | 773, 774 |
| AsuHPI | GGTGA | 3 cut(s) | 23, 418, 434 |
| AvaI | CYCGRG | 1 cut(s) | 772 |
| AvaII | GGWCC | 3 cut(s) | 535, 707, 817 |
| AxyI | CCTNAGG | 1 cut(s) | 437 |
| BaeGI | GKGCMC | 1 cut(s) | 666 |
| BalI | TGGCCA | 2 cut(s) | 221, 269 |
| BanI | GGYRCC | 3 cut(s) | 569, 661, 783 |
| BauI | CACGAG | 2 cut(s) | 335, 811 |
| BbvCI | CCTCAGC | 1 cut(s) | 201 |
| BbvI | GCAGC | 5 cut(s) | 226, 318, 359, 388, 686 |
| BccI | CCATC | 5 cut(s) | 2, 39, 278, 581, 774 |
| BceAI | ACGGC | 2 cut(s) | 59, 99 |
| BciT130I | CCWGG | 1 cut(s) | 759 |
| BcnI | CCSGG | 2 cut(s) | 773, 774 |
| BcoDI | GTCTC | 3 cut(s) | 167, 625, 786 |
| BfaI | CTAG | 3 cut(s) | 47, 62, 539 |
| BfoI | RGCGCY | 1 cut(s) | 573 |
| Bme1390I | CCNGG | 3 cut(s) | 759, 773, 774 |
| Bme18I | GGWCC | 3 cut(s) | 535, 707, 817 |
| BmeT110I | CYCGRG | 1 cut(s) | 772 |
| BmgT120I | GGNCC | 3 cut(s) | 535, 707, 817 |
| BmiI | GGNNCC | 7 cut(s) | 536, 571, 663, 708, 709, 785, 818 |
| BmrFI | CCNGG | 3 cut(s) | 759, 773, 774 |
| BmsI | GCATC | 2 cut(s) | 309, 592 |
| BoxI | GACNNNNGTC | 1 cut(s) | 637 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 11, 43 |
| BpmI | CTGGAG | 2 cut(s) | 149, 437 |
| Bpu10I | CCTNAGC | 2 cut(s) | 201, 669 |
| BpuMI | CCSGG | 2 cut(s) | 773, 774 |
| BsaHI | GRCGYC | 2 cut(s) | 246, 570 |
| BsaI | GGTCTC | 2 cut(s) | 167, 786 |
| BsaJI | CCNNGG | 7 cut(s) | 81, 157, 222, 250, 351, 459, 772 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 276, 438, 439, 658, 703, 737 |
| Bse118I | RCCGGY | 1 cut(s) | 610 |
| Bse1I | ACTGG | 1 cut(s) | 201 |
| Bse21I | CCTNAGG | 1 cut(s) | 437 |
| Bse3DI | GCAATG | 1 cut(s) | 321 |
| BseBI | CCWGG | 1 cut(s) | 759 |
| BseDI | CCNNGG | 7 cut(s) | 81, 157, 222, 250, 351, 459, 772 |
| BseGI | GGATG | 2 cut(s) | 693, 785 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 276, 438, 439, 658, 703, 737 |
| BseMI | GCAATG | 1 cut(s) | 321 |
| BseMII | CTCAG | 3 cut(s) | 192, 428, 683 |
| BseNI | ACTGG | 1 cut(s) | 201 |
| BseSI | GKGCMC | 1 cut(s) | 666 |
| BseX3I | CGGCCG | 2 cut(s) | 129, 462 |
| BseXI | GCAGC | 5 cut(s) | 226, 318, 359, 388, 686 |
| BseYI | CCCAGC | 3 cut(s) | 530, 651, 710 |
| BsgI | GTGCAG | 3 cut(s) | 122, 317, 395 |
| Bsh1236I | CGCG | 4 cut(s) | 76, 252, 461, 746 |
| Bsh1285I | CGRYCG | 3 cut(s) | 132, 465, 841 |
| BshFI | GGCC | 6 cut(s) | 60, 131, 221, 269, 464, 614 |
| BshNI | GGYRCC | 3 cut(s) | 569, 661, 783 |
| BsiEI | CGRYCG | 3 cut(s) | 132, 465, 841 |
| BsiHKCI | CYCGRG | 1 cut(s) | 772 |
| BsiSI | CCGG | 3 cut(s) | 132, 611, 773 |
| BslFI | GGGAC | 3 cut(s) | 293, 548, 693 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 276, 438, 439, 658, 703, 737 |
| BsmAI | GTCTC | 3 cut(s) | 167, 625, 786 |
| BsmFI | GGGAC | 3 cut(s) | 293, 548, 693 |
| BsmI | GAATGC | 1 cut(s) | 479 |
| BsnI | GGCC | 6 cut(s) | 60, 131, 221, 269, 464, 614 |
| Bso31I | GGTCTC | 2 cut(s) | 167, 786 |
| BsoBI | CYCGRG | 1 cut(s) | 772 |
| Bsp1286I | GDGCHC | 1 cut(s) | 666 |
| Bsp143I | GATC | 2 cut(s) | 821, 838 |
| BspANI | GGCC | 6 cut(s) | 60, 131, 221, 269, 464, 614 |
| BspCNI | CTCAG | 3 cut(s) | 193, 429, 682 |
| BspFNI | CGCG | 4 cut(s) | 76, 252, 461, 746 |
| BspLI | GGNNCC | 7 cut(s) | 536, 571, 663, 708, 709, 785, 818 |
| BspT107I | GGYRCC | 3 cut(s) | 569, 661, 783 |
| BspTNI | GGTCTC | 2 cut(s) | 167, 786 |
| BsrBI | CCGCTC | 4 cut(s) | 16, 211, 277, 668 |
| BsrDI | GCAATG | 1 cut(s) | 321 |
| BsrFI | RCCGGY | 1 cut(s) | 610 |
| BsrI | ACTGG | 1 cut(s) | 201 |
| BssAI | RCCGGY | 1 cut(s) | 610 |
| BssECI | CCNNGG | 7 cut(s) | 81, 157, 222, 250, 351, 459, 772 |
| BssMI | GATC | 2 cut(s) | 821, 838 |
| BssNI | GRCGYC | 2 cut(s) | 246, 570 |
| BssSI | CACGAG | 2 cut(s) | 335, 811 |
| BssT1I | CCWWGG | 3 cut(s) | 157, 222, 351 |
| Bst2BI | CACGAG | 2 cut(s) | 335, 811 |
| Bst2UI | CCWGG | 1 cut(s) | 759 |
| BstACI | GRCGYC | 2 cut(s) | 246, 570 |
| BstC8I | GCNNGC | 6 cut(s) | 219, 612, 647, 666, 748, 853 |
| BstDEI | CTNAG | 3 cut(s) | 201, 437, 669 |
| BstDSI | CCRYGG | 3 cut(s) | 81, 250, 459 |
| BstEII | GGTNACC | 1 cut(s) | 427 |
| BstF5I | GGATG | 2 cut(s) | 693, 785 |
| BstFNI | CGCG | 4 cut(s) | 76, 252, 461, 746 |
| BstH2I | RGCGCY | 1 cut(s) | 573 |
| BstHHI | GCGC | 5 cut(s) | 78, 572, 607, 691, 767 |
| BstKTI | GATC | 2 cut(s) | 824, 841 |
| BstMAI | GTCTC | 3 cut(s) | 167, 625, 786 |
| BstMBI | GATC | 2 cut(s) | 821, 838 |
| BstMCI | CGRYCG | 3 cut(s) | 132, 465, 841 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 464, 467, 476, 604, 611, 661, 674 |
| BstNI | CCWGG | 1 cut(s) | 759 |
| BstNSI | RCATGY | 1 cut(s) | 556 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 637 |
| BstPI | GGTNACC | 1 cut(s) | 427 |
| BstSCI | CCNGG | 3 cut(s) | 757, 771, 772 |
| BstSLI | GKGCMC | 1 cut(s) | 666 |
| BstUI | CGCG | 4 cut(s) | 76, 252, 461, 746 |
| BstV1I | GCAGC | 5 cut(s) | 226, 318, 359, 388, 686 |
| BstZI | CGGCCG | 2 cut(s) | 129, 462 |
| Bsu36I | CCTNAGG | 1 cut(s) | 437 |
| BsuRI | GGCC | 6 cut(s) | 60, 131, 221, 269, 464, 614 |
| BtgI | CCRYGG | 3 cut(s) | 81, 250, 459 |
| BtgZI | GCGATG | 1 cut(s) | 524 |
| BtsCI | GGATG | 2 cut(s) | 693, 785 |
| Cac8I | GCNNGC | 6 cut(s) | 219, 612, 647, 666, 748, 853 |
| CciNI | GCGGCCGC | 1 cut(s) | 462 |
| CfoI | GCGC | 5 cut(s) | 78, 572, 607, 691, 767 |
| Cfr10I | RCCGGY | 1 cut(s) | 610 |
| Cfr13I | GGNCC | 3 cut(s) | 535, 707, 817 |
| Cfr42I | CCGCGG | 2 cut(s) | 253, 462 |
| Cfr9I | CCCGGG | 1 cut(s) | 772 |
| CseI | GACGC | 1 cut(s) | 579 |
| Csp6I | GTAC | 1 cut(s) | 621 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 70, 105 |
| CviAII | CATG | 2 cut(s) | 145, 553 |
| CviQI | GTAC | 1 cut(s) | 621 |
| DdeI | CTNAG | 3 cut(s) | 201, 437, 669 |
| DinI | GGCGCC | 1 cut(s) | 571 |
| DpnI | GATC | 2 cut(s) | 823, 840 |
| DpnII | GATC | 2 cut(s) | 821, 838 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 705 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 705 |
| EaeI | YGGCCR | 5 cut(s) | 129, 219, 267, 462, 612 |
| EagI | CGGCCG | 2 cut(s) | 129, 462 |
| EciI | GGCGGA | 5 cut(s) | 194, 242, 376, 509, 792 |
| EclXI | CGGCCG | 2 cut(s) | 129, 462 |
| Eco130I | CCWWGG | 3 cut(s) | 157, 222, 351 |
| Eco31I | GGTCTC | 2 cut(s) | 167, 786 |
| Eco47I | GGWCC | 3 cut(s) | 535, 707, 817 |
| Eco52I | CGGCCG | 2 cut(s) | 129, 462 |
| Eco57I | CTGAAG | 3 cut(s) | 88, 465, 578 |
| Eco81I | CCTNAGG | 1 cut(s) | 437 |
| Eco88I | CYCGRG | 1 cut(s) | 772 |
| Eco91I | GGTNACC | 1 cut(s) | 427 |
| EcoO109I | RGGNCCY | 2 cut(s) | 535, 707 |
| EcoO65I | GGTNACC | 1 cut(s) | 427 |
| EcoRII | CCWGG | 1 cut(s) | 757 |
| EcoT14I | CCWWGG | 3 cut(s) | 157, 222, 351 |
| EgeI | GGCGCC | 1 cut(s) | 571 |
| EheI | GGCGCC | 1 cut(s) | 571 |
| ErhI | CCWWGG | 3 cut(s) | 157, 222, 351 |
| FaeI | CATG | 2 cut(s) | 148, 556 |
| FaiI | YATR | 6 cut(s) | 37, 146, 240, 548, 554, 789 |
| FaqI | GGGAC | 3 cut(s) | 293, 548, 693 |
| FatI | CATG | 2 cut(s) | 144, 552 |
| FauI | CCCGC | 7 cut(s) | 9, 58, 270, 372, 440, 648, 673 |
| FblI | GTMKAC | 1 cut(s) | 243 |
| FokI | GGATG | 2 cut(s) | 680, 792 |
| FspBI | CTAG | 3 cut(s) | 47, 62, 539 |
| GlaI | GCGC | 5 cut(s) | 77, 571, 606, 690, 766 |
| GsaI | CCCAGC | 3 cut(s) | 534, 655, 714 |
| GsuI | CTGGAG | 2 cut(s) | 149, 437 |
| HaeII | RGCGCY | 1 cut(s) | 573 |
| HaeIII | GGCC | 6 cut(s) | 60, 131, 221, 269, 464, 614 |
| HapII | CCGG | 3 cut(s) | 132, 611, 773 |
| HgaI | GACGC | 1 cut(s) | 579 |
| HhaI | GCGC | 5 cut(s) | 78, 572, 607, 691, 767 |
| Hin1I | GRCGYC | 2 cut(s) | 246, 570 |
| Hin1II | CATG | 2 cut(s) | 148, 556 |
| Hin6I | GCGC | 5 cut(s) | 76, 570, 605, 689, 765 |
| HinP1I | GCGC | 5 cut(s) | 76, 570, 605, 689, 765 |
| HincII | GTYRAC | 1 cut(s) | 244 |
| HindII | GTYRAC | 1 cut(s) | 244 |
| HinfI | GANTC | 5 cut(s) | 383, 518, 717, 754, 830 |
| HpaII | CCGG | 3 cut(s) | 132, 611, 773 |
| HphI | GGTGA | 3 cut(s) | 23, 418, 434 |
| Hpy166II | GTNNAC | 1 cut(s) | 244 |
| Hpy188I | TCNGA | 4 cut(s) | 698, 737, 805, 821 |
| Hpy188III | TCNNGA | 1 cut(s) | 166 |
| Hpy8I | GTNNAC | 1 cut(s) | 244 |
| Hpy99I | CGWCG | 2 cut(s) | 248, 702 |
| HpyAV | CCTTC | 7 cut(s) | 112, 181, 440, 499, 520, 559, 697 |
| HpyCH4IV | ACGT | 2 cut(s) | 246, 264 |
| HpyCH4V | TGCA | 3 cut(s) | 139, 334, 376 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 464, 467, 476, 604, 611, 661, 674 |
| HpyF3I | CTNAG | 3 cut(s) | 201, 437, 669 |
| HpySE526I | ACGT | 2 cut(s) | 246, 264 |
| Hsp92I | GRCGYC | 2 cut(s) | 246, 570 |
| Hsp92II | CATG | 2 cut(s) | 148, 556 |
| HspAI | GCGC | 5 cut(s) | 76, 570, 605, 689, 765 |
| KasI | GGCGCC | 1 cut(s) | 569 |
| KflI | GGGWCCC | 1 cut(s) | 707 |
| KroI | GCCGGC | 1 cut(s) | 610 |
| KroNI | GCCGGC | 1 cut(s) | 612 |
| KspI | CCGCGG | 2 cut(s) | 253, 462 |
| Kzo9I | GATC | 2 cut(s) | 821, 838 |
| LmnI | GCTCC | 1 cut(s) | 313 |
| Lsp1109I | GCAGC | 5 cut(s) | 226, 318, 359, 388, 686 |
| LweI | GCATC | 2 cut(s) | 309, 592 |
| MaeI | CTAG | 3 cut(s) | 47, 62, 539 |
| MaeII | ACGT | 2 cut(s) | 246, 264 |
| MaeIII | GTNAC | 3 cut(s) | 233, 427, 591 |
| MalI | GATC | 2 cut(s) | 823, 840 |
| MbiI | CCGCTC | 4 cut(s) | 16, 211, 277, 668 |
| MboI | GATC | 2 cut(s) | 821, 838 |
| MfeI | CAATTG | 1 cut(s) | 87 |
| MhlI | GDGCHC | 1 cut(s) | 666 |
| MlsI | TGGCCA | 2 cut(s) | 221, 269 |
| MluCI | AATT | 2 cut(s) | 87, 173 |
| MluNI | TGGCCA | 2 cut(s) | 221, 269 |
| Mly113I | GGCGCC | 1 cut(s) | 570 |
| MlyI | GAGTC | 4 cut(s) | 392, 527, 711, 839 |
| MmeI | TCCRAC | 3 cut(s) | 291, 721, 828 |
| Mox20I | TGGCCA | 2 cut(s) | 221, 269 |
| MroNI | GCCGGC | 1 cut(s) | 610 |
| MscI | TGGCCA | 2 cut(s) | 221, 269 |
| MseI | TTAA | 1 cut(s) | 501 |
| MslI | CAYNNNNRTG | 1 cut(s) | 551 |
| Msp20I | TGGCCA | 2 cut(s) | 221, 269 |
| MspA1I | CMGCKG | 7 cut(s) | 217, 252, 379, 461, 470, 655, 677 |
| MspI | CCGG | 3 cut(s) | 132, 611, 773 |
| MspR9I | CCNGG | 3 cut(s) | 759, 773, 774 |
| MunI | CAATTG | 1 cut(s) | 87 |
| Mva1269I | GAATGC | 1 cut(s) | 479 |
| MvaI | CCWGG | 1 cut(s) | 759 |
| MvnI | CGCG | 4 cut(s) | 76, 252, 461, 746 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 464, 467, 476, 604, 611, 661, 674 |
| NaeI | GCCGGC | 1 cut(s) | 612 |
| NarI | GGCGCC | 1 cut(s) | 570 |
| NciI | CCSGG | 2 cut(s) | 773, 774 |
| NdeII | GATC | 2 cut(s) | 821, 838 |
| NgoMIV | GCCGGC | 1 cut(s) | 610 |
| NlaIII | CATG | 2 cut(s) | 148, 556 |
| NlaIV | GGNNCC | 7 cut(s) | 536, 571, 663, 708, 709, 785, 818 |
| NmeAIII | GCCGAG | 1 cut(s) | 89 |
| NmuCI | GTSAC | 2 cut(s) | 233, 591 |
| NotI | GCGGCCGC | 1 cut(s) | 462 |
| NspI | RCATGY | 1 cut(s) | 556 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 270 |
| PctI | GAATGC | 1 cut(s) | 479 |
| PdiI | GCCGGC | 1 cut(s) | 612 |
| PfeI | GAWTC | 1 cut(s) | 754 |
| PflFI | GACNNNGTC | 2 cut(s) | 239, 517 |
| Ple19I | CGATCG | 1 cut(s) | 841 |
| PleI | GAGTC | 4 cut(s) | 391, 526, 711, 838 |
| PluTI | GGCGCC | 1 cut(s) | 573 |
| PpsI | GAGTC | 4 cut(s) | 391, 526, 711, 838 |
| PpuMI | RGGWCCY | 2 cut(s) | 535, 707 |
| PshAI | GACNNNNGTC | 1 cut(s) | 637 |
| Psp5II | RGGWCCY | 2 cut(s) | 535, 707 |
| Psp6I | CCWGG | 1 cut(s) | 757 |
| PspEI | GGTNACC | 1 cut(s) | 427 |
| PspFI | CCCAGC | 3 cut(s) | 530, 651, 710 |
| PspGI | CCWGG | 1 cut(s) | 757 |
| PspN4I | GGNNCC | 7 cut(s) | 536, 571, 663, 708, 709, 785, 818 |
| PspPI | GGNCC | 3 cut(s) | 535, 707, 817 |
| PspPPI | RGGWCCY | 2 cut(s) | 535, 707 |
| PsyI | GACNNNGTC | 2 cut(s) | 239, 517 |
| PvuI | CGATCG | 1 cut(s) | 841 |
| PvuII | CAGCTG | 1 cut(s) | 217 |
| RsaI | GTAC | 1 cut(s) | 622 |
| RsaNI | GTAC | 1 cut(s) | 621 |
| RseI | CAYNNNNRTG | 1 cut(s) | 551 |
| SacII | CCGCGG | 2 cut(s) | 253, 462 |
| SalI | GTCGAC | 1 cut(s) | 242 |
| SaqAI | TTAA | 1 cut(s) | 501 |
| Sau3AI | GATC | 2 cut(s) | 821, 838 |
| Sau96I | GGNCC | 3 cut(s) | 535, 707, 817 |
| SchI | GAGTC | 4 cut(s) | 392, 527, 711, 839 |
| ScrFI | CCNGG | 3 cut(s) | 759, 773, 774 |
| SduI | GDGCHC | 1 cut(s) | 666 |
| SfaNI | GCATC | 2 cut(s) | 309, 592 |
| SfoI | GGCGCC | 1 cut(s) | 571 |
| Sfr303I | CCGCGG | 2 cut(s) | 253, 462 |
| SgrBI | CCGCGG | 2 cut(s) | 253, 462 |
| SinI | GGWCC | 3 cut(s) | 535, 707, 817 |
| SmaI | CCCGGG | 1 cut(s) | 774 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 551 |
| Sse9I | AATT | 2 cut(s) | 87, 173 |
| SspDI | GGCGCC | 1 cut(s) | 569 |
| SspMI | CTAG | 3 cut(s) | 47, 62, 539 |
| StyD4I | CCNGG | 3 cut(s) | 757, 771, 772 |
| StyI | CCWWGG | 3 cut(s) | 157, 222, 351 |
| TaiI | ACGT | 2 cut(s) | 249, 267 |
| TaqI | TCGA | 4 cut(s) | 243, 273, 576, 833 |
| TaqII | GACCGA | 1 cut(s) | 530 |
| TasI | AATT | 2 cut(s) | 87, 173 |
| TfiI | GAWTC | 1 cut(s) | 754 |
| Tru1I | TTAA | 1 cut(s) | 501 |
| Tru9I | TTAA | 1 cut(s) | 501 |
| TseFI | GTSAC | 2 cut(s) | 233, 591 |
| TseI | GCWGC | 5 cut(s) | 214, 331, 347, 376, 674 |
| Tsp45I | GTSAC | 2 cut(s) | 233, 591 |
| TspDTI | ATGAA | 1 cut(s) | 309 |
| TspGWI | ACGGA | 1 cut(s) | 715 |
| TspMI | CCCGGG | 1 cut(s) | 772 |
| Tth111I | GACNNNGTC | 2 cut(s) | 239, 517 |
| VpaK11BI | GGWCC | 3 cut(s) | 535, 707, 817 |
| XceI | RCATGY | 1 cut(s) | 556 |
| XmaI | CCCGGG | 1 cut(s) | 772 |
| XmiI | GTMKAC | 1 cut(s) | 243 |
| XspI | CTAG | 3 cut(s) | 47, 62, 539 |
| ZraI | GACGTC | 1 cut(s) | 247 |