No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 789 |
| Acc65I | GGTACC | 1 cut(s) | 245 |
| AccB1I | GGYRCC | 2 cut(s) | 245, 797 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 807 |
| AccBSI | CCGCTC | 3 cut(s) | 56, 505, 876 |
| AccII | CGCG | 3 cut(s) | 107, 684, 946 |
| AclWI | GGATC | 3 cut(s) | 573, 592, 819 |
| AcuI | CTGAAG | 3 cut(s) | 581, 587, 806 |
| AcyI | GRCGYC | 1 cut(s) | 901 |
| AfaI | GTAC | 3 cut(s) | 51, 247, 728 |
| AfeI | AGCGCT | 1 cut(s) | 183 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 46, 451, 504, 562, 688, 807 |
| AgsI | TTSAA | 2 cut(s) | 229, 712 |
| AjiI | CACGTC | 1 cut(s) | 316 |
| AjnI | CCWGG | 1 cut(s) | 93 |
| AleI | CACNNNNGTG | 1 cut(s) | 632 |
| AluBI | AGCT | 3 cut(s) | 424, 487, 671 |
| AluI | AGCT | 3 cut(s) | 424, 487, 671 |
| Alw26I | GTCTC | 4 cut(s) | 53, 314, 411, 535 |
| AlwI | GGATC | 3 cut(s) | 573, 592, 819 |
| Aor51HI | AGCGCT | 1 cut(s) | 183 |
| AoxI | GGCC | 5 cut(s) | 66, 188, 330, 411, 442 |
| ApaI | GGGCCC | 1 cut(s) | 334 |
| ApeKI | GCWGC | 1 cut(s) | 179 |
| Asp718I | GGTACC | 1 cut(s) | 245 |
| AspLEI | GCGC | 2 cut(s) | 109, 184 |
| AspS9I | GGNCC | 6 cut(s) | 66, 330, 331, 442, 508, 778 |
| AsuC2I | CCSGG | 3 cut(s) | 46, 661, 832 |
| AsuHPI | GGTGA | 5 cut(s) | 19, 130, 646, 662, 823 |
| AvaII | GGWCC | 2 cut(s) | 508, 778 |
| BaeGI | GKGCMC | 3 cut(s) | 135, 334, 800 |
| BanI | GGYRCC | 2 cut(s) | 245, 797 |
| BanII | GRGCYC | 1 cut(s) | 334 |
| BauI | CACGAG | 1 cut(s) | 250 |
| BbsI | GAAGAC | 1 cut(s) | 236 |
| BbvI | GCAGC | 1 cut(s) | 191 |
| BccI | CCATC | 2 cut(s) | 463, 736 |
| BceAI | ACGGC | 2 cut(s) | 482, 683 |
| BciT130I | CCWGG | 1 cut(s) | 95 |
| BcnI | CCSGG | 3 cut(s) | 46, 661, 832 |
| BcoDI | GTCTC | 4 cut(s) | 53, 314, 411, 535 |
| BfoI | RGCGCY | 1 cut(s) | 185 |
| BfuAI | ACCTGC | 1 cut(s) | 789 |
| BisI | GCNGC | 9 cut(s) | 105, 173, 180, 215, 278, 309, 576, 750, 947 |
| BlsI | GCNGC | 9 cut(s) | 106, 174, 181, 216, 279, 310, 577, 751, 948 |
| Bme1390I | CCNGG | 4 cut(s) | 46, 95, 661, 832 |
| Bme18I | GGWCC | 2 cut(s) | 508, 778 |
| BmgBI | CACGTC | 1 cut(s) | 316 |
| BmgT120I | GGNCC | 6 cut(s) | 66, 330, 331, 442, 508, 778 |
| BmiI | GGNNCC | 8 cut(s) | 67, 171, 213, 247, 331, 332, 509, 799 |
| BmrFI | CCNGG | 4 cut(s) | 46, 95, 661, 832 |
| BmrI | ACTGGG | 3 cut(s) | 72, 172, 817 |
| BmsI | GCATC | 4 cut(s) | 160, 454, 463, 736 |
| BmuI | ACTGGG | 3 cut(s) | 72, 172, 817 |
| BpiI | GAAGAC | 1 cut(s) | 236 |
| BpmI | CTGGAG | 3 cut(s) | 230, 497, 665 |
| Bpu10I | CCTNAGC | 3 cut(s) | 185, 579, 877 |
| BpuEI | CTTGAG | 1 cut(s) | 413 |
| BpuMI | CCSGG | 3 cut(s) | 46, 661, 832 |
| BsaHI | GRCGYC | 1 cut(s) | 901 |
| BsaJI | CCNNGG | 3 cut(s) | 45, 450, 478 |
| BsaWI | WCCGGW | 1 cut(s) | 904 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 916, 946 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 46, 451, 504, 562, 688, 807 |
| Bse1I | ACTGG | 4 cut(s) | 67, 167, 247, 812 |
| Bse3DI | GCAATG | 2 cut(s) | 198, 744 |
| BseBI | CCWGG | 1 cut(s) | 95 |
| BseDI | CCNNGG | 3 cut(s) | 45, 450, 478 |
| BseGI | GGATG | 2 cut(s) | 478, 751 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 46, 451, 504, 562, 688, 807 |
| BseMI | GCAATG | 2 cut(s) | 198, 744 |
| BseMII | CTCAG | 6 cut(s) | 102, 621, 663, 854, 891, 932 |
| BseNI | ACTGG | 4 cut(s) | 67, 167, 247, 812 |
| BseRI | GAGGAG | 4 cut(s) | 311, 314, 317, 652 |
| BseSI | GKGCMC | 3 cut(s) | 135, 334, 800 |
| BseXI | GCAGC | 1 cut(s) | 191 |
| BseYI | CCCAGC | 1 cut(s) | 203 |
| Bsh1236I | CGCG | 3 cut(s) | 107, 684, 946 |
| BshFI | GGCC | 5 cut(s) | 68, 190, 332, 413, 444 |
| BshNI | GGYRCC | 2 cut(s) | 245, 797 |
| BsiSI | CCGG | 4 cut(s) | 45, 661, 831, 905 |
| BslFI | GGGAC | 3 cut(s) | 173, 521, 805 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 46, 451, 504, 562, 688, 807 |
| BsmAI | GTCTC | 4 cut(s) | 53, 314, 411, 535 |
| BsmFI | GGGAC | 3 cut(s) | 173, 521, 805 |
| BsnI | GGCC | 5 cut(s) | 68, 190, 332, 413, 444 |
| Bsp120I | GGGCCC | 1 cut(s) | 330 |
| Bsp1286I | GDGCHC | 3 cut(s) | 135, 334, 800 |
| Bsp143I | GATC | 5 cut(s) | 381, 523, 565, 597, 824 |
| Bsp19I | CCATGG | 1 cut(s) | 478 |
| BspANI | GGCC | 5 cut(s) | 68, 190, 332, 413, 444 |
| BspCNI | CTCAG | 6 cut(s) | 103, 622, 664, 853, 890, 931 |
| BspFNI | CGCG | 3 cut(s) | 107, 684, 946 |
| BspLI | GGNNCC | 8 cut(s) | 67, 171, 213, 247, 331, 332, 509, 799 |
| BspMI | ACCTGC | 1 cut(s) | 789 |
| BspPI | GGATC | 3 cut(s) | 573, 592, 819 |
| BspT107I | GGYRCC | 2 cut(s) | 245, 797 |
| BsrBI | CCGCTC | 3 cut(s) | 56, 505, 876 |
| BsrDI | GCAATG | 2 cut(s) | 198, 744 |
| BsrI | ACTGG | 4 cut(s) | 67, 167, 247, 812 |
| BssECI | CCNNGG | 3 cut(s) | 45, 450, 478 |
| BssMI | GATC | 5 cut(s) | 381, 523, 565, 597, 824 |
| BssNI | GRCGYC | 1 cut(s) | 901 |
| BssSI | CACGAG | 1 cut(s) | 250 |
| BssT1I | CCWWGG | 2 cut(s) | 450, 478 |
| Bst2BI | CACGAG | 1 cut(s) | 250 |
| Bst2UI | CCWGG | 1 cut(s) | 95 |
| Bst6I | CTCTTC | 2 cut(s) | 266, 372 |
| BstACI | GRCGYC | 1 cut(s) | 901 |
| BstC8I | GCNNGC | 7 cut(s) | 102, 135, 177, 219, 357, 485, 735 |
| BstDEI | CTNAG | 8 cut(s) | 111, 185, 579, 630, 672, 840, 877, 918 |
| BstDSI | CCRYGG | 1 cut(s) | 478 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 449, 560 |
| BstF5I | GGATG | 2 cut(s) | 478, 751 |
| BstFNI | CGCG | 3 cut(s) | 107, 684, 946 |
| BstH2I | RGCGCY | 1 cut(s) | 185 |
| BstHHI | GCGC | 2 cut(s) | 109, 184 |
| BstKTI | GATC | 5 cut(s) | 384, 526, 568, 600, 827 |
| BstMAI | GTCTC | 4 cut(s) | 53, 314, 411, 535 |
| BstMBI | GATC | 5 cut(s) | 381, 523, 565, 597, 824 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 84, 106, 181, 214, 356, 361, 473, 755 |
| BstNI | CCWGG | 1 cut(s) | 95 |
| BstNSI | RCATGY | 1 cut(s) | 179 |
| BstSCI | CCNGG | 4 cut(s) | 44, 93, 659, 830 |
| BstSLI | GKGCMC | 3 cut(s) | 135, 334, 800 |
| BstUI | CGCG | 3 cut(s) | 107, 684, 946 |
| BstV1I | GCAGC | 1 cut(s) | 191 |
| BstV2I | GAAGAC | 1 cut(s) | 236 |
| BstX2I | RGATCY | 1 cut(s) | 597 |
| BstYI | RGATCY | 1 cut(s) | 597 |
| BsuRI | GGCC | 5 cut(s) | 68, 190, 332, 413, 444 |
| BtgI | CCRYGG | 1 cut(s) | 478 |
| BtgZI | GCGATG | 1 cut(s) | 482 |
| BtrI | CACGTC | 1 cut(s) | 316 |
| BtsCI | GGATG | 2 cut(s) | 478, 751 |
| BtsI | GCAGTG | 1 cut(s) | 765 |
| BtsIMutI | CAGTG | 3 cut(s) | 240, 627, 765 |
| BveI | ACCTGC | 1 cut(s) | 789 |
| Cac8I | GCNNGC | 7 cut(s) | 102, 135, 177, 219, 357, 485, 735 |
| CfoI | GCGC | 2 cut(s) | 109, 184 |
| Cfr13I | GGNCC | 6 cut(s) | 66, 330, 331, 442, 508, 778 |
| CseI | GACGC | 3 cut(s) | 296, 833, 890 |
| Csp6I | GTAC | 3 cut(s) | 50, 246, 727 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 127, 162 |
| CviAII | CATG | 4 cut(s) | 7, 176, 479, 527 |
| CviQI | GTAC | 3 cut(s) | 50, 246, 727 |
| DdeI | CTNAG | 8 cut(s) | 111, 185, 579, 630, 672, 840, 877, 918 |
| DpnI | GATC | 5 cut(s) | 383, 525, 567, 599, 826 |
| DpnII | GATC | 5 cut(s) | 381, 523, 565, 597, 824 |
| Eam1104I | CTCTTC | 2 cut(s) | 266, 372 |
| EarI | CTCTTC | 2 cut(s) | 266, 372 |
| EciI | GGCGGA | 4 cut(s) | 182, 470, 737, 817 |
| Eco130I | CCWWGG | 2 cut(s) | 450, 478 |
| Eco147I | AGGCCT | 1 cut(s) | 190 |
| Eco24I | GRGCYC | 1 cut(s) | 334 |
| Eco47I | GGWCC | 2 cut(s) | 508, 778 |
| Eco47III | AGCGCT | 1 cut(s) | 183 |
| Eco57I | CTGAAG | 3 cut(s) | 581, 587, 806 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 449, 560 |
| EcoO109I | RGGNCCY | 2 cut(s) | 330, 508 |
| EcoRII | CCWGG | 1 cut(s) | 93 |
| EcoT14I | CCWWGG | 2 cut(s) | 450, 478 |
| EcoT38I | GRGCYC | 1 cut(s) | 334 |
| ErhI | CCWWGG | 2 cut(s) | 450, 478 |
| FaeI | CATG | 4 cut(s) | 10, 179, 482, 530 |
| FaiI | YATR | 5 cut(s) | 8, 177, 480, 528, 551 |
| FaqI | GGGAC | 3 cut(s) | 173, 521, 805 |
| FatI | CATG | 4 cut(s) | 6, 175, 478, 526 |
| FauI | CCCGC | 3 cut(s) | 40, 142, 498 |
| Fnu4HI | GCNGC | 9 cut(s) | 105, 173, 180, 215, 278, 309, 576, 750, 947 |
| FokI | GGATG | 2 cut(s) | 485, 758 |
| FriOI | GRGCYC | 1 cut(s) | 334 |
| Fsp4HI | GCNGC | 9 cut(s) | 105, 173, 180, 215, 278, 309, 576, 750, 947 |
| GlaI | GCGC | 2 cut(s) | 108, 183 |
| GluI | GCNGC | 9 cut(s) | 105, 173, 180, 215, 278, 309, 576, 750, 947 |
| GsaI | CCCAGC | 1 cut(s) | 207 |
| GsuI | CTGGAG | 3 cut(s) | 230, 497, 665 |
| HaeII | RGCGCY | 1 cut(s) | 185 |
| HaeIII | GGCC | 5 cut(s) | 68, 190, 332, 413, 444 |
| HapII | CCGG | 4 cut(s) | 45, 661, 831, 905 |
| HgaI | GACGC | 3 cut(s) | 296, 833, 890 |
| HhaI | GCGC | 2 cut(s) | 109, 184 |
| Hin1I | GRCGYC | 1 cut(s) | 901 |
| Hin1II | CATG | 4 cut(s) | 10, 179, 482, 530 |
| Hin6I | GCGC | 2 cut(s) | 107, 182 |
| HinP1I | GCGC | 2 cut(s) | 107, 182 |
| HinfI | GANTC | 3 cut(s) | 611, 914, 925 |
| HpaII | CCGG | 4 cut(s) | 45, 661, 831, 905 |
| HphI | GGTGA | 5 cut(s) | 19, 130, 646, 662, 823 |
| Hpy166II | GTNNAC | 2 cut(s) | 430, 910 |
| Hpy188III | TCNNGA | 3 cut(s) | 392, 822, 957 |
| Hpy8I | GTNNAC | 2 cut(s) | 430, 910 |
| HpyAV | CCTTC | 6 cut(s) | 109, 115, 556, 611, 748, 787 |
| HpyCH4IV | ACGT | 3 cut(s) | 315, 432, 818 |
| HpyCH4V | TGCA | 5 cut(s) | 22, 100, 179, 406, 617 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 84, 106, 181, 214, 356, 361, 473, 755 |
| HpyF3I | CTNAG | 8 cut(s) | 111, 185, 579, 630, 672, 840, 877, 918 |
| HpySE526I | ACGT | 3 cut(s) | 315, 432, 818 |
| Hsp92I | GRCGYC | 1 cut(s) | 901 |
| Hsp92II | CATG | 4 cut(s) | 10, 179, 482, 530 |
| HspAI | GCGC | 2 cut(s) | 107, 182 |
| KpnI | GGTACC | 1 cut(s) | 249 |
| Kzo9I | GATC | 5 cut(s) | 381, 523, 565, 597, 824 |
| LmnI | GCTCC | 3 cut(s) | 169, 211, 541 |
| Lsp1109I | GCAGC | 1 cut(s) | 191 |
| LweI | GCATC | 4 cut(s) | 160, 454, 463, 736 |
| MaeII | ACGT | 3 cut(s) | 315, 432, 818 |
| MaeIII | GTNAC | 1 cut(s) | 763 |
| MalI | GATC | 5 cut(s) | 383, 525, 567, 599, 826 |
| MbiI | CCGCTC | 3 cut(s) | 56, 505, 876 |
| MboI | GATC | 5 cut(s) | 381, 523, 565, 597, 824 |
| MboII | GAAGA | 4 cut(s) | 241, 283, 389, 716 |
| MflI | RGATCY | 1 cut(s) | 597 |
| MhlI | GDGCHC | 3 cut(s) | 135, 334, 800 |
| MluCI | AATT | 1 cut(s) | 860 |
| MlyI | GAGTC | 1 cut(s) | 919 |
| MmeI | TCCRAC | 1 cut(s) | 519 |
| MseI | TTAA | 1 cut(s) | 585 |
| MslI | CAYNNNNRTG | 1 cut(s) | 632 |
| MspA1I | CMGCKG | 1 cut(s) | 922 |
| MspI | CCGG | 4 cut(s) | 45, 661, 831, 905 |
| MspR9I | CCNGG | 4 cut(s) | 46, 95, 661, 832 |
| MvaI | CCWGG | 1 cut(s) | 95 |
| MvnI | CGCG | 3 cut(s) | 107, 684, 946 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 84, 106, 181, 214, 356, 361, 473, 755 |
| NciI | CCSGG | 3 cut(s) | 46, 661, 832 |
| NcoI | CCATGG | 1 cut(s) | 478 |
| NdeII | GATC | 5 cut(s) | 381, 523, 565, 597, 824 |
| NlaIII | CATG | 4 cut(s) | 10, 179, 482, 530 |
| NlaIV | GGNNCC | 8 cut(s) | 67, 171, 213, 247, 331, 332, 509, 799 |
| NmeAIII | GCCGAG | 1 cut(s) | 94 |
| NmuCI | GTSAC | 1 cut(s) | 763 |
| NspI | RCATGY | 1 cut(s) | 179 |
| OliI | CACNNNNGTG | 1 cut(s) | 632 |
| PaeI | GCATGC | 1 cut(s) | 179 |
| PceI | AGGCCT | 1 cut(s) | 190 |
| PfeI | GAWTC | 2 cut(s) | 611, 914 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 807 |
| PkrI | GCNGC | 9 cut(s) | 106, 174, 181, 216, 279, 310, 577, 751, 948 |
| PleI | GAGTC | 1 cut(s) | 919 |
| PpsI | GAGTC | 1 cut(s) | 919 |
| PpuMI | RGGWCCY | 1 cut(s) | 508 |
| Psp5II | RGGWCCY | 1 cut(s) | 508 |
| Psp6I | CCWGG | 1 cut(s) | 93 |
| PspFI | CCCAGC | 1 cut(s) | 203 |
| PspGI | CCWGG | 1 cut(s) | 93 |
| PspN4I | GGNNCC | 8 cut(s) | 67, 171, 213, 247, 331, 332, 509, 799 |
| PspOMI | GGGCCC | 1 cut(s) | 330 |
| PspPI | GGNCC | 6 cut(s) | 66, 330, 331, 442, 508, 778 |
| PspPPI | RGGWCCY | 1 cut(s) | 508 |
| PsuI | RGATCY | 1 cut(s) | 597 |
| RsaI | GTAC | 3 cut(s) | 51, 247, 728 |
| RsaNI | GTAC | 3 cut(s) | 50, 246, 727 |
| RseI | CAYNNNNRTG | 1 cut(s) | 632 |
| SaqAI | TTAA | 1 cut(s) | 585 |
| SatI | GCNGC | 9 cut(s) | 105, 173, 180, 215, 278, 309, 576, 750, 947 |
| Sau3AI | GATC | 5 cut(s) | 381, 523, 565, 597, 824 |
| Sau96I | GGNCC | 6 cut(s) | 66, 330, 331, 442, 508, 778 |
| SchI | GAGTC | 1 cut(s) | 919 |
| ScrFI | CCNGG | 4 cut(s) | 46, 95, 661, 832 |
| SduI | GDGCHC | 3 cut(s) | 135, 334, 800 |
| SfaNI | GCATC | 4 cut(s) | 160, 454, 463, 736 |
| SinI | GGWCC | 2 cut(s) | 508, 778 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 632 |
| SmlI | CTYRAG | 1 cut(s) | 392 |
| SmoI | CTYRAG | 1 cut(s) | 392 |
| SphI | GCATGC | 1 cut(s) | 179 |
| Sse9I | AATT | 1 cut(s) | 860 |
| SseBI | AGGCCT | 1 cut(s) | 190 |
| StuI | AGGCCT | 1 cut(s) | 190 |
| StyD4I | CCNGG | 4 cut(s) | 44, 93, 659, 830 |
| StyI | CCWWGG | 2 cut(s) | 450, 478 |
| TaiI | ACGT | 3 cut(s) | 318, 435, 821 |
| TasI | AATT | 1 cut(s) | 860 |
| TatI | WGTACW | 1 cut(s) | 726 |
| TauI | GCSGC | 8 cut(s) | 107, 175, 217, 280, 311, 578, 752, 949 |
| TfiI | GAWTC | 2 cut(s) | 611, 914 |
| Tru1I | TTAA | 1 cut(s) | 585 |
| Tru9I | TTAA | 1 cut(s) | 585 |
| TscAI | CASTG | 3 cut(s) | 247, 634, 772 |
| TseFI | GTSAC | 1 cut(s) | 763 |
| TseI | GCWGC | 1 cut(s) | 179 |
| Tsp45I | GTSAC | 1 cut(s) | 763 |
| TspRI | CASTG | 3 cut(s) | 247, 634, 772 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 807 |
| VpaK11BI | GGWCC | 2 cut(s) | 508, 778 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 449, 560 |
| XceI | RCATGY | 1 cut(s) | 179 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 421 |