No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 702, 980 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 990 |
| AccBSI | CCGCTC | 3 cut(s) | 460, 522, 778 |
| AccI | GTMKAC | 1 cut(s) | 855 |
| AccII | CGCG | 4 cut(s) | 24, 144, 602, 741 |
| AclWI | GGATC | 2 cut(s) | 521, 1001 |
| AcoI | YGGCCR | 5 cut(s) | 47, 249, 316, 562, 837 |
| AcsI | RAATTY | 1 cut(s) | 464 |
| AcuI | CTGAAG | 2 cut(s) | 989, 1169 |
| AcvI | CACGTG | 1 cut(s) | 790 |
| AcyI | GRCGYC | 1 cut(s) | 703 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 265, 712, 928, 990, 1046 |
| AflIII | ACRYGT | 1 cut(s) | 789 |
| AgsI | TTSAA | 4 cut(s) | 536, 634, 764, 895 |
| AjiI | CACGTC | 1 cut(s) | 117 |
| AjnI | CCWGG | 1 cut(s) | 1133 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 455, 487 |
| AluBI | AGCT | 7 cut(s) | 94, 334, 552, 589, 685, 748, 815 |
| AluI | AGCT | 7 cut(s) | 94, 334, 552, 589, 685, 748, 815 |
| Alw26I | GTCTC | 3 cut(s) | 656, 1008, 1158 |
| AlwI | GGATC | 2 cut(s) | 521, 1001 |
| Ama87I | CYCGRG | 3 cut(s) | 615, 773, 1157 |
| ApeKI | GCWGC | 2 cut(s) | 625, 1027 |
| ApoI | RAATTY | 1 cut(s) | 464 |
| AspLEI | GCGC | 2 cut(s) | 122, 705 |
| AspS9I | GGNCC | 3 cut(s) | 769, 1106, 1160 |
| AsuC2I | CCSGG | 2 cut(s) | 1158, 1159 |
| AsuHPI | GGTGA | 5 cut(s) | 20, 73, 289, 298, 534 |
| AsuNHI | GCTAGC | 1 cut(s) | 685 |
| AvaI | CYCGRG | 3 cut(s) | 615, 773, 1157 |
| AvaII | GGWCC | 2 cut(s) | 769, 1106 |
| BalI | TGGCCA | 2 cut(s) | 318, 564 |
| BanI | GGYRCC | 2 cut(s) | 702, 980 |
| BauI | CACGAG | 1 cut(s) | 1062 |
| BbrPI | CACGTG | 1 cut(s) | 790 |
| BbvI | GCAGC | 2 cut(s) | 637, 1039 |
| BccI | CCATC | 7 cut(s) | 395, 483, 503, 573, 581, 724, 1112 |
| BceAI | ACGGC | 1 cut(s) | 236 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 134, 168 |
| BciT130I | CCWGG | 1 cut(s) | 1135 |
| BclI | TGATCA | 1 cut(s) | 1099 |
| BcnI | CCSGG | 2 cut(s) | 1158, 1159 |
| BcoDI | GTCTC | 3 cut(s) | 656, 1008, 1158 |
| BfaI | CTAG | 2 cut(s) | 491, 686 |
| BfoI | RGCGCY | 1 cut(s) | 706 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 419 |
| BlpI | GCTNAGC | 1 cut(s) | 222 |
| Bme1390I | CCNGG | 3 cut(s) | 1135, 1158, 1159 |
| Bme18I | GGWCC | 2 cut(s) | 769, 1106 |
| BmeT110I | CYCGRG | 3 cut(s) | 615, 773, 1157 |
| BmgBI | CACGTC | 1 cut(s) | 117 |
| BmgT120I | GGNCC | 3 cut(s) | 769, 1106, 1160 |
| BmiI | GGNNCC | 4 cut(s) | 270, 378, 704, 982 |
| BmrFI | CCNGG | 3 cut(s) | 1135, 1158, 1159 |
| BmsI | GCATC | 5 cut(s) | 270, 715, 724, 934, 1063 |
| BmtI | GCTAGC | 1 cut(s) | 689 |
| BpmI | CTGGAG | 2 cut(s) | 638, 821 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 222 |
| BpuMI | CCSGG | 2 cut(s) | 1158, 1159 |
| BsaAI | YACGTR | 1 cut(s) | 790 |
| BsaHI | GRCGYC | 1 cut(s) | 703 |
| BsaI | GGTCTC | 1 cut(s) | 656 |
| BsaJI | CCNNGG | 7 cut(s) | 124, 162, 711, 739, 840, 1133, 1157 |
| BsaWI | WCCGGW | 1 cut(s) | 766 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 185, 215, 293, 323 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 265, 712, 928, 990, 1046 |
| Bse118I | RCCGGY | 1 cut(s) | 83 |
| Bse1I | ACTGG | 3 cut(s) | 252, 259, 995 |
| BseBI | CCWGG | 1 cut(s) | 1135 |
| BseDI | CCNNGG | 7 cut(s) | 124, 162, 711, 739, 840, 1133, 1157 |
| BseGI | GGATG | 5 cut(s) | 514, 739, 858, 1078, 1120 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 265, 712, 928, 990, 1046 |
| BseMII | CTCAG | 2 cut(s) | 236, 918 |
| BseNI | ACTGG | 3 cut(s) | 252, 259, 995 |
| BseRI | GAGGAG | 2 cut(s) | 361, 470 |
| BseXI | GCAGC | 2 cut(s) | 637, 1039 |
| BseYI | CCCAGC | 5 cut(s) | 87, 209, 368, 449, 1067 |
| Bsh1236I | CGCG | 4 cut(s) | 24, 144, 602, 741 |
| Bsh1285I | CGRYCG | 1 cut(s) | 528 |
| BshNI | GGYRCC | 2 cut(s) | 702, 980 |
| BsiEI | CGRYCG | 1 cut(s) | 528 |
| BsiHKCI | CYCGRG | 3 cut(s) | 615, 773, 1157 |
| BsiSI | CCGG | 4 cut(s) | 84, 767, 1109, 1158 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 265, 712, 928, 990, 1046 |
| BsmAI | GTCTC | 3 cut(s) | 656, 1008, 1158 |
| BsmBI | CGTCTC | 1 cut(s) | 1008 |
| Bso31I | GGTCTC | 1 cut(s) | 656 |
| BsoBI | CYCGRG | 3 cut(s) | 615, 773, 1157 |
| Bsp143I | GATC | 4 cut(s) | 513, 642, 993, 1099 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 222 |
| Bsp19I | CCATGG | 1 cut(s) | 162 |
| BspCNI | CTCAG | 2 cut(s) | 235, 919 |
| BspFNI | CGCG | 4 cut(s) | 24, 144, 602, 741 |
| BspHI | TCATGA | 1 cut(s) | 1169 |
| BspLI | GGNNCC | 4 cut(s) | 270, 378, 704, 982 |
| BspOI | GCTAGC | 1 cut(s) | 689 |
| BspPI | GGATC | 2 cut(s) | 521, 1001 |
| BspT107I | GGYRCC | 2 cut(s) | 702, 980 |
| BspTNI | GGTCTC | 1 cut(s) | 656 |
| BsrBI | CCGCTC | 3 cut(s) | 460, 522, 778 |
| BsrFI | RCCGGY | 1 cut(s) | 83 |
| BsrI | ACTGG | 3 cut(s) | 252, 259, 995 |
| BssAI | RCCGGY | 1 cut(s) | 83 |
| BssECI | CCNNGG | 7 cut(s) | 124, 162, 711, 739, 840, 1133, 1157 |
| BssMI | GATC | 4 cut(s) | 513, 642, 993, 1099 |
| BssNI | GRCGYC | 1 cut(s) | 703 |
| BssSI | CACGAG | 1 cut(s) | 1062 |
| BssT1I | CCWWGG | 4 cut(s) | 124, 162, 711, 840 |
| Bst2BI | CACGAG | 1 cut(s) | 1062 |
| Bst2UI | CCWGG | 1 cut(s) | 1135 |
| Bst4CI | ACNGT | 9 cut(s) | 111, 232, 325, 358, 439, 540, 546, 1036, 1057 |
| Bst6I | CTCTTC | 1 cut(s) | 9 |
| BstACI | GRCGYC | 1 cut(s) | 703 |
| BstBAI | YACGTR | 1 cut(s) | 790 |
| BstDEI | CTNAG | 2 cut(s) | 222, 927 |
| BstDSI | CCRYGG | 2 cut(s) | 162, 739 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 710, 926 |
| BstF5I | GGATG | 5 cut(s) | 514, 739, 858, 1078, 1120 |
| BstFNI | CGCG | 4 cut(s) | 24, 144, 602, 741 |
| BstH2I | RGCGCY | 1 cut(s) | 706 |
| BstHHI | GCGC | 2 cut(s) | 122, 705 |
| BstKTI | GATC | 4 cut(s) | 516, 645, 996, 1102 |
| BstMAI | GTCTC | 3 cut(s) | 656, 1008, 1158 |
| BstMBI | GATC | 4 cut(s) | 513, 642, 993, 1099 |
| BstMCI | CGRYCG | 1 cut(s) | 528 |
| BstNI | CCWGG | 1 cut(s) | 1135 |
| BstNSI | RCATGY | 1 cut(s) | 202 |
| BstSCI | CCNGG | 3 cut(s) | 1133, 1156, 1157 |
| BstUI | CGCG | 4 cut(s) | 24, 144, 602, 741 |
| BstV1I | GCAGC | 2 cut(s) | 637, 1039 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 163 |
| BtgI | CCRYGG | 2 cut(s) | 162, 739 |
| BtgZI | GCGATG | 2 cut(s) | 738, 743 |
| BtrI | CACGTC | 1 cut(s) | 117 |
| BtsCI | GGATG | 5 cut(s) | 514, 739, 858, 1078, 1120 |
| BtsI | GCAGTG | 2 cut(s) | 939, 1093 |
| BtsIMutI | CAGTG | 3 cut(s) | 245, 939, 1093 |
| CciI | TCATGA | 1 cut(s) | 1169 |
| CfoI | GCGC | 2 cut(s) | 122, 705 |
| Cfr10I | RCCGGY | 1 cut(s) | 83 |
| Cfr13I | GGNCC | 3 cut(s) | 769, 1106, 1160 |
| Cfr42I | CCGCGG | 1 cut(s) | 742 |
| Cfr9I | CCCGGG | 1 cut(s) | 1157 |
| CseI | GACGC | 3 cut(s) | 155, 990, 1008 |
| CviAII | CATG | 6 cut(s) | 163, 199, 286, 584, 1103, 1170 |
| DdeI | CTNAG | 2 cut(s) | 222, 927 |
| DinI | GGCGCC | 1 cut(s) | 704 |
| DpnI | GATC | 4 cut(s) | 515, 644, 995, 1101 |
| DpnII | GATC | 4 cut(s) | 513, 642, 993, 1099 |
| EaeI | YGGCCR | 5 cut(s) | 47, 249, 316, 562, 837 |
| Eam1104I | CTCTTC | 1 cut(s) | 9 |
| EarI | CTCTTC | 1 cut(s) | 9 |
| EciI | GGCGGA | 2 cut(s) | 731, 1127 |
| Eco130I | CCWWGG | 4 cut(s) | 124, 162, 711, 840 |
| Eco147I | AGGCCT | 1 cut(s) | 422 |
| Eco31I | GGTCTC | 1 cut(s) | 656 |
| Eco47I | GGWCC | 2 cut(s) | 769, 1106 |
| Eco57I | CTGAAG | 2 cut(s) | 989, 1169 |
| Eco72I | CACGTG | 1 cut(s) | 790 |
| Eco88I | CYCGRG | 3 cut(s) | 615, 773, 1157 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 710, 926 |
| EcoRI | GAATTC | 1 cut(s) | 464 |
| EcoRII | CCWGG | 1 cut(s) | 1133 |
| EcoT14I | CCWWGG | 4 cut(s) | 124, 162, 711, 840 |
| EgeI | GGCGCC | 1 cut(s) | 704 |
| EheI | GGCGCC | 1 cut(s) | 704 |
| ErhI | CCWWGG | 4 cut(s) | 124, 162, 711, 840 |
| Esp3I | CGTCTC | 1 cut(s) | 1008 |
| FaeI | CATG | 6 cut(s) | 166, 202, 289, 587, 1106, 1173 |
| FaiI | YATR | 9 cut(s) | 164, 200, 204, 287, 585, 812, 910, 1104, 1171 |
| FatI | CATG | 6 cut(s) | 162, 198, 285, 583, 1102, 1169 |
| FauI | CCCGC | 4 cut(s) | 453, 746, 1036, 1040 |
| FbaI | TGATCA | 1 cut(s) | 1099 |
| FblI | GTMKAC | 1 cut(s) | 855 |
| FokI | GGATG | 5 cut(s) | 521, 746, 845, 1085, 1127 |
| FspBI | CTAG | 2 cut(s) | 491, 686 |
| GlaI | GCGC | 2 cut(s) | 121, 704 |
| GsaI | CCCAGC | 5 cut(s) | 91, 213, 372, 453, 1071 |
| GsuI | CTGGAG | 2 cut(s) | 638, 821 |
| HaeII | RGCGCY | 1 cut(s) | 706 |
| HapII | CCGG | 4 cut(s) | 84, 767, 1109, 1158 |
| HgaI | GACGC | 3 cut(s) | 155, 990, 1008 |
| HhaI | GCGC | 2 cut(s) | 122, 705 |
| Hin1I | GRCGYC | 1 cut(s) | 703 |
| Hin1II | CATG | 6 cut(s) | 166, 202, 289, 587, 1106, 1173 |
| Hin6I | GCGC | 2 cut(s) | 120, 703 |
| HinP1I | GCGC | 2 cut(s) | 120, 703 |
| HincII | GTYRAC | 3 cut(s) | 103, 114, 856 |
| HindII | GTYRAC | 3 cut(s) | 103, 114, 856 |
| HinfI | GANTC | 3 cut(s) | 52, 887, 1129 |
| HpaII | CCGG | 4 cut(s) | 84, 767, 1109, 1158 |
| HphI | GGTGA | 5 cut(s) | 20, 73, 289, 298, 534 |
| Hpy166II | GTNNAC | 3 cut(s) | 103, 114, 856 |
| Hpy188I | TCNGA | 2 cut(s) | 265, 1149 |
| Hpy188III | TCNNGA | 3 cut(s) | 655, 862, 1170 |
| Hpy8I | GTNNAC | 3 cut(s) | 103, 114, 856 |
| Hpy99I | CGWCG | 2 cut(s) | 149, 1024 |
| HpyAV | CCTTC | 4 cut(s) | 403, 844, 865, 901 |
| HpyCH4III | ACNGT | 9 cut(s) | 111, 232, 325, 358, 439, 540, 546, 1036, 1057 |
| HpyCH4IV | ACGT | 3 cut(s) | 116, 693, 789 |
| HpyCH4V | TGCA | 3 cut(s) | 483, 583, 667 |
| HpyF3I | CTNAG | 2 cut(s) | 222, 927 |
| HpySE526I | ACGT | 3 cut(s) | 116, 693, 789 |
| Hsp92I | GRCGYC | 1 cut(s) | 703 |
| Hsp92II | CATG | 6 cut(s) | 166, 202, 289, 587, 1106, 1173 |
| HspAI | GCGC | 2 cut(s) | 120, 703 |
| KasI | GGCGCC | 1 cut(s) | 702 |
| Ksp22I | TGATCA | 1 cut(s) | 1099 |
| KspI | CCGCGG | 1 cut(s) | 742 |
| Kzo9I | GATC | 4 cut(s) | 513, 642, 993, 1099 |
| LmnI | GCTCC | 6 cut(s) | 91, 331, 376, 457, 802, 826 |
| Lsp1109I | GCAGC | 2 cut(s) | 637, 1039 |
| LweI | GCATC | 5 cut(s) | 270, 715, 724, 934, 1063 |
| MaeI | CTAG | 2 cut(s) | 491, 686 |
| MaeII | ACGT | 3 cut(s) | 116, 693, 789 |
| MaeIII | GTNAC | 3 cut(s) | 128, 358, 540 |
| MalI | GATC | 4 cut(s) | 515, 644, 995, 1101 |
| MbiI | CCGCTC | 3 cut(s) | 460, 522, 778 |
| MboI | GATC | 4 cut(s) | 513, 642, 993, 1099 |
| MboII | GAAGA | 2 cut(s) | 26, 418 |
| MfeI | CAATTG | 1 cut(s) | 363 |
| MlsI | TGGCCA | 2 cut(s) | 318, 564 |
| MluCI | AATT | 6 cut(s) | 176, 363, 464, 662, 962, 1007 |
| MluNI | TGGCCA | 2 cut(s) | 318, 564 |
| Mly113I | GGCGCC | 1 cut(s) | 703 |
| MlyI | GAGTC | 1 cut(s) | 1123 |
| MmeI | TCCRAC | 2 cut(s) | 243, 354 |
| Mox20I | TGGCCA | 2 cut(s) | 318, 564 |
| MscI | TGGCCA | 2 cut(s) | 318, 564 |
| MseI | TTAA | 2 cut(s) | 605, 696 |
| Msp20I | TGGCCA | 2 cut(s) | 318, 564 |
| MspA1I | CMGCKG | 6 cut(s) | 209, 314, 741, 881, 1043, 1126 |
| MspI | CCGG | 4 cut(s) | 84, 767, 1109, 1158 |
| MspR9I | CCNGG | 3 cut(s) | 1135, 1158, 1159 |
| MunI | CAATTG | 1 cut(s) | 363 |
| MvaI | CCWGG | 1 cut(s) | 1135 |
| MvnI | CGCG | 4 cut(s) | 24, 144, 602, 741 |
| NarI | GGCGCC | 1 cut(s) | 703 |
| NciI | CCSGG | 2 cut(s) | 1158, 1159 |
| NcoI | CCATGG | 1 cut(s) | 162 |
| NdeII | GATC | 4 cut(s) | 513, 642, 993, 1099 |
| NheI | GCTAGC | 1 cut(s) | 685 |
| NlaIII | CATG | 6 cut(s) | 166, 202, 289, 587, 1106, 1173 |
| NlaIV | GGNNCC | 4 cut(s) | 270, 378, 704, 982 |
| NmeAIII | GCCGAG | 1 cut(s) | 533 |
| NmuCI | GTSAC | 1 cut(s) | 540 |
| NspI | RCATGY | 1 cut(s) | 202 |
| PaeR7I | CTCGAG | 2 cut(s) | 615, 773 |
| PagI | TCATGA | 1 cut(s) | 1169 |
| PceI | AGGCCT | 1 cut(s) | 422 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 780 |
| PfeI | GAWTC | 2 cut(s) | 52, 887 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 990 |
| PleI | GAGTC | 1 cut(s) | 1123 |
| PluTI | GGCGCC | 1 cut(s) | 706 |
| PmaCI | CACGTG | 1 cut(s) | 790 |
| PmlI | CACGTG | 1 cut(s) | 790 |
| PpsI | GAGTC | 1 cut(s) | 1123 |
| Ppu21I | YACGTR | 1 cut(s) | 790 |
| Psp6I | CCWGG | 1 cut(s) | 1133 |
| PspCI | CACGTG | 1 cut(s) | 790 |
| PspFI | CCCAGC | 5 cut(s) | 87, 209, 368, 449, 1067 |
| PspGI | CCWGG | 1 cut(s) | 1133 |
| PspN4I | GGNNCC | 4 cut(s) | 270, 378, 704, 982 |
| PspPI | GGNCC | 3 cut(s) | 769, 1106, 1160 |
| PspXI | VCTCGAGB | 2 cut(s) | 615, 773 |
| SacII | CCGCGG | 1 cut(s) | 742 |
| SalI | GTCGAC | 1 cut(s) | 854 |
| SaqAI | TTAA | 2 cut(s) | 605, 696 |
| Sau3AI | GATC | 4 cut(s) | 513, 642, 993, 1099 |
| Sau96I | GGNCC | 3 cut(s) | 769, 1106, 1160 |
| SchI | GAGTC | 1 cut(s) | 1123 |
| ScrFI | CCNGG | 3 cut(s) | 1135, 1158, 1159 |
| SfaNI | GCATC | 5 cut(s) | 270, 715, 724, 934, 1063 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 419 |
| SfoI | GGCGCC | 1 cut(s) | 704 |
| Sfr274I | CTCGAG | 2 cut(s) | 615, 773 |
| Sfr303I | CCGCGG | 1 cut(s) | 742 |
| SgrBI | CCGCGG | 1 cut(s) | 742 |
| SinI | GGWCC | 2 cut(s) | 769, 1106 |
| SlaI | CTCGAG | 2 cut(s) | 615, 773 |
| SmaI | CCCGGG | 1 cut(s) | 1159 |
| SmlI | CTYRAG | 2 cut(s) | 615, 773 |
| SmoI | CTYRAG | 2 cut(s) | 615, 773 |
| Sse9I | AATT | 6 cut(s) | 176, 363, 464, 662, 962, 1007 |
| SseBI | AGGCCT | 1 cut(s) | 422 |
| SspDI | GGCGCC | 1 cut(s) | 702 |
| SspMI | CTAG | 2 cut(s) | 491, 686 |
| StuI | AGGCCT | 1 cut(s) | 422 |
| StyD4I | CCNGG | 3 cut(s) | 1133, 1156, 1157 |
| StyI | CCWWGG | 4 cut(s) | 124, 162, 711, 840 |
| TaaI | ACNGT | 9 cut(s) | 111, 232, 325, 358, 439, 540, 546, 1036, 1057 |
| TaiI | ACGT | 3 cut(s) | 119, 696, 792 |
| TaqI | TCGA | 7 cut(s) | 344, 524, 576, 616, 774, 855, 1022 |
| TasI | AATT | 6 cut(s) | 176, 363, 464, 662, 962, 1007 |
| TfiI | GAWTC | 2 cut(s) | 52, 887 |
| Tru1I | TTAA | 2 cut(s) | 605, 696 |
| Tru9I | TTAA | 2 cut(s) | 605, 696 |
| TscAI | CASTG | 3 cut(s) | 252, 939, 1093 |
| TseFI | GTSAC | 1 cut(s) | 540 |
| TseI | GCWGC | 2 cut(s) | 625, 1027 |
| Tsp45I | GTSAC | 1 cut(s) | 540 |
| TspDTI | ATGAA | 1 cut(s) | 1158 |
| TspMI | CCCGGG | 1 cut(s) | 1157 |
| TspRI | CASTG | 3 cut(s) | 252, 939, 1093 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 990 |
| VpaK11BI | GGWCC | 2 cut(s) | 769, 1106 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 710, 926 |
| XapI | RAATTY | 1 cut(s) | 464 |
| XceI | RCATGY | 1 cut(s) | 202 |
| XhoI | CTCGAG | 2 cut(s) | 615, 773 |
| XmaI | CCCGGG | 1 cut(s) | 1157 |
| XmiI | GTMKAC | 1 cut(s) | 855 |
| XspI | CTAG | 2 cut(s) | 491, 686 |