No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 3 cut(s) | 114, 434, 470 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 480 |
| AccBSI | CCGCTC | 2 cut(s) | 112, 674 |
| AccII | CGCG | 3 cut(s) | 723, 744, 779 |
| AcoI | YGGCCR | 3 cut(s) | 246, 669, 718 |
| AcsI | RAATTY | 1 cut(s) | 380 |
| AcuI | CTGAAG | 1 cut(s) | 789 |
| AcyI | GRCGYC | 3 cut(s) | 115, 435, 491 |
| AfaI | GTAC | 1 cut(s) | 525 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 93, 124, 235, 280, 300, 339, 340, 480, 646 |
| AflIII | ACRYGT | 1 cut(s) | 199 |
| AgsI | TTSAA | 1 cut(s) | 569 |
| AjiI | CACGTC | 1 cut(s) | 202 |
| AjnI | CCWGG | 3 cut(s) | 6, 293, 620 |
| AluBI | AGCT | 4 cut(s) | 43, 76, 160, 211 |
| AluI | AGCT | 4 cut(s) | 43, 76, 160, 211 |
| Alw26I | GTCTC | 3 cut(s) | 55, 208, 695 |
| Ama87I | CYCGRG | 3 cut(s) | 65, 580, 681 |
| AoxI | GGCC | 6 cut(s) | 225, 246, 330, 541, 669, 718 |
| ApaI | GGGCCC | 1 cut(s) | 229 |
| ApeKI | GCWGC | 8 cut(s) | 11, 40, 140, 232, 277, 362, 585, 757 |
| ApoI | RAATTY | 1 cut(s) | 380 |
| AspLEI | GCGC | 3 cut(s) | 117, 437, 575 |
| AspS9I | GGNCC | 4 cut(s) | 225, 226, 331, 542 |
| AsuHPI | GGTGA | 2 cut(s) | 319, 361 |
| AvaI | CYCGRG | 3 cut(s) | 65, 580, 681 |
| BaeGI | GKGCMC | 1 cut(s) | 229 |
| BalI | TGGCCA | 1 cut(s) | 248 |
| BanI | GGYRCC | 3 cut(s) | 114, 434, 470 |
| BanII | GRGCYC | 1 cut(s) | 229 |
| BauI | CACGAG | 1 cut(s) | 150 |
| BbvCI | CCTCAGC | 1 cut(s) | 324 |
| BbvI | GCAGC | 8 cut(s) | 23, 52, 127, 219, 289, 349, 597, 744 |
| BceAI | ACGGC | 2 cut(s) | 339, 350 |
| BciT130I | CCWGG | 3 cut(s) | 8, 295, 622 |
| BcoDI | GTCTC | 3 cut(s) | 55, 208, 695 |
| BfaI | CTAG | 2 cut(s) | 440, 548 |
| BfmI | CTRYAG | 2 cut(s) | 233, 275 |
| BfoI | RGCGCY | 3 cut(s) | 118, 438, 576 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 717 |
| Bme1390I | CCNGG | 3 cut(s) | 8, 295, 622 |
| BmeT110I | CYCGRG | 3 cut(s) | 65, 580, 681 |
| BmgBI | CACGTC | 1 cut(s) | 202 |
| BmgT120I | GGNCC | 4 cut(s) | 225, 226, 331, 542 |
| BmiI | GGNNCC | 5 cut(s) | 116, 227, 353, 436, 472 |
| BmrFI | CCNGG | 3 cut(s) | 8, 295, 622 |
| BmrI | ACTGGG | 2 cut(s) | 490, 634 |
| BmsI | GCATC | 3 cut(s) | 73, 127, 444 |
| BmuI | ACTGGG | 2 cut(s) | 490, 634 |
| BpmI | CTGGAG | 2 cut(s) | 233, 338 |
| Bpu10I | CCTNAGC | 2 cut(s) | 44, 324 |
| BpuEI | CTTGAG | 1 cut(s) | 358 |
| BsaBI | GATNNNNATC | 1 cut(s) | 269 |
| BsaHI | GRCGYC | 3 cut(s) | 115, 435, 491 |
| BsaJI | CCNNGG | 3 cut(s) | 87, 372, 721 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 582, 612 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 93, 124, 235, 280, 300, 339, 340, 480, 646 |
| Bse118I | RCCGGY | 2 cut(s) | 529, 607 |
| Bse1I | ACTGG | 4 cut(s) | 321, 485, 640, 721 |
| Bse8I | GATNNNNATC | 1 cut(s) | 269 |
| BseBI | CCWGG | 3 cut(s) | 8, 295, 622 |
| BseDI | CCNNGG | 3 cut(s) | 87, 372, 721 |
| BseGI | GGATG | 5 cut(s) | 88, 187, 562, 619, 694 |
| BseJI | GATNNNNATC | 1 cut(s) | 269 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 93, 124, 235, 280, 300, 339, 340, 480, 646 |
| BseMII | CTCAG | 2 cut(s) | 58, 315 |
| BseNI | ACTGG | 4 cut(s) | 321, 485, 640, 721 |
| BseRI | GAGGAG | 1 cut(s) | 65 |
| BseSI | GKGCMC | 1 cut(s) | 229 |
| BseXI | GCAGC | 8 cut(s) | 23, 52, 127, 219, 289, 349, 597, 744 |
| BseYI | CCCAGC | 1 cut(s) | 495 |
| BsgI | GTGCAG | 1 cut(s) | 572 |
| Bsh1236I | CGCG | 3 cut(s) | 723, 744, 779 |
| BshFI | GGCC | 6 cut(s) | 227, 248, 332, 543, 671, 720 |
| BshNI | GGYRCC | 3 cut(s) | 114, 434, 470 |
| BsiHKCI | CYCGRG | 3 cut(s) | 65, 580, 681 |
| BsiSI | CCGG | 2 cut(s) | 530, 608 |
| BslFI | GGGAC | 3 cut(s) | 356, 478, 637 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 93, 124, 235, 280, 300, 339, 340, 480, 646 |
| BsmAI | GTCTC | 3 cut(s) | 55, 208, 695 |
| BsmBI | CGTCTC | 1 cut(s) | 208 |
| BsmFI | GGGAC | 3 cut(s) | 356, 478, 637 |
| BsnI | GGCC | 6 cut(s) | 227, 248, 332, 543, 671, 720 |
| BsoBI | CYCGRG | 3 cut(s) | 65, 580, 681 |
| Bsp120I | GGGCCC | 1 cut(s) | 225 |
| Bsp1286I | GDGCHC | 1 cut(s) | 229 |
| BspANI | GGCC | 6 cut(s) | 227, 248, 332, 543, 671, 720 |
| BspCNI | CTCAG | 2 cut(s) | 57, 316 |
| BspFNI | CGCG | 3 cut(s) | 723, 744, 779 |
| BspLI | GGNNCC | 5 cut(s) | 116, 227, 353, 436, 472 |
| BspMAI | CTGCAG | 2 cut(s) | 237, 279 |
| BspT107I | GGYRCC | 3 cut(s) | 114, 434, 470 |
| BsrBI | CCGCTC | 2 cut(s) | 112, 674 |
| BsrFI | RCCGGY | 2 cut(s) | 529, 607 |
| BsrI | ACTGG | 4 cut(s) | 321, 485, 640, 721 |
| BssAI | RCCGGY | 2 cut(s) | 529, 607 |
| BssECI | CCNNGG | 3 cut(s) | 87, 372, 721 |
| BssNI | GRCGYC | 3 cut(s) | 115, 435, 491 |
| BssSI | CACGAG | 1 cut(s) | 150 |
| BssT1I | CCWWGG | 1 cut(s) | 87 |
| Bst2BI | CACGAG | 1 cut(s) | 150 |
| Bst2UI | CCWGG | 3 cut(s) | 8, 295, 622 |
| Bst4CI | ACNGT | 3 cut(s) | 373, 390, 505 |
| Bst6I | CTCTTC | 1 cut(s) | 530 |
| BstACI | GRCGYC | 3 cut(s) | 115, 435, 491 |
| BstDEI | CTNAG | 3 cut(s) | 44, 252, 324 |
| BstDSI | CCRYGG | 2 cut(s) | 372, 721 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 122, 233 |
| BstF5I | GGATG | 5 cut(s) | 88, 187, 562, 619, 694 |
| BstFNI | CGCG | 3 cut(s) | 723, 744, 779 |
| BstH2I | RGCGCY | 3 cut(s) | 118, 438, 576 |
| BstHHI | GCGC | 3 cut(s) | 117, 437, 575 |
| BstMAI | GTCTC | 3 cut(s) | 55, 208, 695 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 146, 329, 505, 585, 717, 757 |
| BstNI | CCWGG | 3 cut(s) | 8, 295, 622 |
| BstNSI | RCATGY | 1 cut(s) | 764 |
| BstSCI | CCNGG | 3 cut(s) | 6, 293, 620 |
| BstSFI | CTRYAG | 2 cut(s) | 233, 275 |
| BstSLI | GKGCMC | 1 cut(s) | 229 |
| BstUI | CGCG | 3 cut(s) | 723, 744, 779 |
| BstV1I | GCAGC | 8 cut(s) | 23, 52, 127, 219, 289, 349, 597, 744 |
| BsuRI | GGCC | 6 cut(s) | 227, 248, 332, 543, 671, 720 |
| BtgI | CCRYGG | 2 cut(s) | 372, 721 |
| BtgZI | GCGATG | 2 cut(s) | 150, 425 |
| BtrI | CACGTC | 1 cut(s) | 202 |
| BtsCI | GGATG | 5 cut(s) | 88, 187, 562, 619, 694 |
| BtsIMutI | CAGTG | 1 cut(s) | 714 |
| CfoI | GCGC | 3 cut(s) | 117, 437, 575 |
| Cfr10I | RCCGGY | 2 cut(s) | 529, 607 |
| Cfr13I | GGNCC | 4 cut(s) | 225, 226, 331, 542 |
| Cfr42I | CCGCGG | 1 cut(s) | 724 |
| CseI | GACGC | 4 cut(s) | 3, 155, 480, 785 |
| Csp6I | GTAC | 1 cut(s) | 524 |
| CviAII | CATG | 1 cut(s) | 761 |
| CviQI | GTAC | 1 cut(s) | 524 |
| DdeI | CTNAG | 3 cut(s) | 44, 252, 324 |
| DinI | GGCGCC | 2 cut(s) | 116, 436 |
| DraI | TTTAAA | 1 cut(s) | 385 |
| EaeI | YGGCCR | 3 cut(s) | 246, 669, 718 |
| Eam1104I | CTCTTC | 1 cut(s) | 530 |
| EarI | CTCTTC | 1 cut(s) | 530 |
| EciI | GGCGGA | 6 cut(s) | 95, 143, 410, 626, 640, 701 |
| Eco130I | CCWWGG | 1 cut(s) | 87 |
| Eco24I | GRGCYC | 1 cut(s) | 229 |
| Eco32I | GATATC | 1 cut(s) | 271 |
| Eco57I | CTGAAG | 1 cut(s) | 789 |
| Eco88I | CYCGRG | 3 cut(s) | 65, 580, 681 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 122, 233 |
| EcoO109I | RGGNCCY | 2 cut(s) | 225, 226 |
| EcoRII | CCWGG | 3 cut(s) | 6, 293, 620 |
| EcoRV | GATATC | 1 cut(s) | 271 |
| EcoT14I | CCWWGG | 1 cut(s) | 87 |
| EcoT38I | GRGCYC | 1 cut(s) | 229 |
| EgeI | GGCGCC | 2 cut(s) | 116, 436 |
| EheI | GGCGCC | 2 cut(s) | 116, 436 |
| ErhI | CCWWGG | 1 cut(s) | 87 |
| Esp3I | CGTCTC | 1 cut(s) | 208 |
| FaeI | CATG | 1 cut(s) | 764 |
| FaiI | YATR | 4 cut(s) | 402, 668, 698, 762 |
| FaqI | GGGAC | 3 cut(s) | 356, 478, 637 |
| FatI | CATG | 1 cut(s) | 760 |
| FauI | CCCGC | 6 cut(s) | 94, 171, 273, 341, 552, 716 |
| FokI | GGATG | 5 cut(s) | 95, 194, 569, 626, 701 |
| FriOI | GRGCYC | 1 cut(s) | 229 |
| FspBI | CTAG | 2 cut(s) | 440, 548 |
| GlaI | GCGC | 3 cut(s) | 116, 436, 574 |
| GsaI | CCCAGC | 1 cut(s) | 499 |
| GsuI | CTGGAG | 2 cut(s) | 233, 338 |
| HaeII | RGCGCY | 3 cut(s) | 118, 438, 576 |
| HaeIII | GGCC | 6 cut(s) | 227, 248, 332, 543, 671, 720 |
| HapII | CCGG | 2 cut(s) | 530, 608 |
| HgaI | GACGC | 4 cut(s) | 3, 155, 480, 785 |
| HhaI | GCGC | 3 cut(s) | 117, 437, 575 |
| Hin1I | GRCGYC | 3 cut(s) | 115, 435, 491 |
| Hin1II | CATG | 1 cut(s) | 764 |
| Hin6I | GCGC | 3 cut(s) | 115, 435, 573 |
| HinP1I | GCGC | 3 cut(s) | 115, 435, 573 |
| HinfI | GANTC | 6 cut(s) | 63, 284, 419, 617, 628, 703 |
| HpaII | CCGG | 2 cut(s) | 530, 608 |
| HphI | GGTGA | 2 cut(s) | 319, 361 |
| Hpy188I | TCNGA | 2 cut(s) | 646, 730 |
| Hpy188III | TCNNGA | 1 cut(s) | 58 |
| Hpy99I | CGWCG | 1 cut(s) | 19 |
| HpyAV | CCTTC | 3 cut(s) | 118, 421, 563 |
| HpyCH4III | ACNGT | 3 cut(s) | 373, 390, 505 |
| HpyCH4IV | ACGT | 1 cut(s) | 201 |
| HpyCH4V | TGCA | 5 cut(s) | 40, 235, 277, 553, 760 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 146, 329, 505, 585, 717, 757 |
| HpyF3I | CTNAG | 3 cut(s) | 44, 252, 324 |
| HpySE526I | ACGT | 1 cut(s) | 201 |
| Hsp92I | GRCGYC | 3 cut(s) | 115, 435, 491 |
| Hsp92II | CATG | 1 cut(s) | 764 |
| HspAI | GCGC | 3 cut(s) | 115, 435, 573 |
| KasI | GGCGCC | 2 cut(s) | 114, 434 |
| KroI | GCCGGC | 2 cut(s) | 529, 607 |
| KroNI | GCCGGC | 2 cut(s) | 531, 609 |
| KspI | CCGCGG | 1 cut(s) | 724 |
| LmnI | GCTCC | 5 cut(s) | 73, 109, 187, 214, 351 |
| Lsp1109I | GCAGC | 8 cut(s) | 23, 52, 127, 219, 289, 349, 597, 744 |
| LweI | GCATC | 3 cut(s) | 73, 127, 444 |
| MaeI | CTAG | 2 cut(s) | 440, 548 |
| MaeII | ACGT | 1 cut(s) | 201 |
| MaeIII | GTNAC | 2 cut(s) | 367, 691 |
| MbiI | CCGCTC | 2 cut(s) | 112, 674 |
| MboII | GAAGA | 5 cut(s) | 274, 322, 529, 547, 782 |
| MhlI | GDGCHC | 1 cut(s) | 229 |
| MlsI | TGGCCA | 1 cut(s) | 248 |
| MluCI | AATT | 1 cut(s) | 380 |
| MluNI | TGGCCA | 1 cut(s) | 248 |
| Mly113I | GGCGCC | 2 cut(s) | 115, 435 |
| MlyI | GAGTC | 3 cut(s) | 57, 293, 697 |
| MmeI | TCCRAC | 1 cut(s) | 624 |
| MnlI | CCTC | 9 cut(s) | 43, 46, 61, 298, 313, 319, 333, 640, 642 |
| Mox20I | TGGCCA | 1 cut(s) | 248 |
| MreI | CGCCGGCG | 2 cut(s) | 529, 607 |
| MroNI | GCCGGC | 2 cut(s) | 529, 607 |
| MscI | TGGCCA | 1 cut(s) | 248 |
| MseI | TTAA | 1 cut(s) | 384 |
| Msp20I | TGGCCA | 1 cut(s) | 248 |
| MspA1I | CMGCKG | 7 cut(s) | 178, 280, 362, 588, 723, 757, 767 |
| MspI | CCGG | 2 cut(s) | 530, 608 |
| MspR9I | CCNGG | 3 cut(s) | 8, 295, 622 |
| MvaI | CCWGG | 3 cut(s) | 8, 295, 622 |
| MvnI | CGCG | 3 cut(s) | 723, 744, 779 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 146, 329, 505, 585, 717, 757 |
| NaeI | GCCGGC | 2 cut(s) | 531, 609 |
| NarI | GGCGCC | 2 cut(s) | 115, 435 |
| NgoMIV | GCCGGC | 2 cut(s) | 529, 607 |
| NlaIII | CATG | 1 cut(s) | 764 |
| NlaIV | GGNNCC | 5 cut(s) | 116, 227, 353, 436, 472 |
| NmuCI | GTSAC | 2 cut(s) | 367, 691 |
| NspI | RCATGY | 1 cut(s) | 764 |
| PaeI | GCATGC | 1 cut(s) | 764 |
| PaeR7I | CTCGAG | 1 cut(s) | 65 |
| PdiI | GCCGGC | 2 cut(s) | 531, 609 |
| PfeI | GAWTC | 3 cut(s) | 419, 617, 628 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 480 |
| PleI | GAGTC | 3 cut(s) | 57, 292, 697 |
| PluTI | GGCGCC | 2 cut(s) | 118, 438 |
| PpsI | GAGTC | 3 cut(s) | 57, 292, 697 |
| Psp6I | CCWGG | 3 cut(s) | 6, 293, 620 |
| PspFI | CCCAGC | 1 cut(s) | 495 |
| PspGI | CCWGG | 3 cut(s) | 6, 293, 620 |
| PspN4I | GGNNCC | 5 cut(s) | 116, 227, 353, 436, 472 |
| PspOMI | GGGCCC | 1 cut(s) | 225 |
| PspPI | GGNCC | 4 cut(s) | 225, 226, 331, 542 |
| PspXI | VCTCGAGB | 1 cut(s) | 65 |
| PstI | CTGCAG | 2 cut(s) | 237, 279 |
| RsaI | GTAC | 1 cut(s) | 525 |
| RsaNI | GTAC | 1 cut(s) | 524 |
| SacII | CCGCGG | 1 cut(s) | 724 |
| SaqAI | TTAA | 1 cut(s) | 384 |
| Sau96I | GGNCC | 4 cut(s) | 225, 226, 331, 542 |
| SchI | GAGTC | 3 cut(s) | 57, 293, 697 |
| ScrFI | CCNGG | 3 cut(s) | 8, 295, 622 |
| SduI | GDGCHC | 1 cut(s) | 229 |
| SetI | ASST | 9 cut(s) | 45, 57, 78, 162, 204, 213, 309, 330, 651 |
| SfaNI | GCATC | 3 cut(s) | 73, 127, 444 |
| SfcI | CTRYAG | 2 cut(s) | 233, 275 |
| SfoI | GGCGCC | 2 cut(s) | 116, 436 |
| Sfr274I | CTCGAG | 1 cut(s) | 65 |
| Sfr303I | CCGCGG | 1 cut(s) | 724 |
| SgrAI | CRCCGGYG | 2 cut(s) | 529, 607 |
| SgrBI | CCGCGG | 1 cut(s) | 724 |
| SlaI | CTCGAG | 1 cut(s) | 65 |
| SmlI | CTYRAG | 2 cut(s) | 65, 337 |
| SmoI | CTYRAG | 2 cut(s) | 65, 337 |
| SphI | GCATGC | 1 cut(s) | 764 |
| Sse9I | AATT | 1 cut(s) | 380 |
| SspDI | GGCGCC | 2 cut(s) | 114, 434 |
| SspMI | CTAG | 2 cut(s) | 440, 548 |
| StyD4I | CCNGG | 3 cut(s) | 6, 293, 620 |
| StyI | CCWWGG | 1 cut(s) | 87 |
| TaaI | ACNGT | 3 cut(s) | 373, 390, 505 |
| TaiI | ACGT | 1 cut(s) | 204 |
| TaqI | TCGA | 2 cut(s) | 17, 66 |
| TasI | AATT | 1 cut(s) | 380 |
| TfiI | GAWTC | 3 cut(s) | 419, 617, 628 |
| Tru1I | TTAA | 1 cut(s) | 384 |
| Tru9I | TTAA | 1 cut(s) | 384 |
| TscAI | CASTG | 1 cut(s) | 721 |
| TseFI | GTSAC | 2 cut(s) | 367, 691 |
| TseI | GCWGC | 8 cut(s) | 11, 40, 140, 232, 277, 362, 585, 757 |
| Tsp45I | GTSAC | 2 cut(s) | 367, 691 |
| TspDTI | ATGAA | 2 cut(s) | 137, 210 |
| TspRI | CASTG | 1 cut(s) | 721 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 480 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 122, 233 |
| XapI | RAATTY | 1 cut(s) | 380 |
| XceI | RCATGY | 1 cut(s) | 764 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 94 |
| XhoI | CTCGAG | 1 cut(s) | 65 |
| XspI | CTAG | 2 cut(s) | 440, 548 |