Cytosolic purine
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 322 |
| AatII | GACGTC | 1 cut(s) | 1280 |
| Acc36I | ACCTGC | 1 cut(s) | 322 |
| Acc65I | GGTACC | 1 cut(s) | 857 |
| AccB1I | GGYRCC | 3 cut(s) | 312, 358, 857 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 210, 432 |
| AccBSI | CCGCTC | 1 cut(s) | 506 |
| AccII | CGCG | 4 cut(s) | 446, 529, 531, 642 |
| AclWI | GGATC | 6 cut(s) | 717, 767, 897, 910, 1049, 1062 |
| AcoI | YGGCCR | 4 cut(s) | 12, 1131, 1165, 1359 |
| AcsI | RAATTY | 3 cut(s) | 159, 195, 376 |
| AcuI | CTGAAG | 1 cut(s) | 47 |
| AcyI | GRCGYC | 3 cut(s) | 313, 359, 1277 |
| AdeI | CACNNNGTG | 1 cut(s) | 432 |
| AfaI | GTAC | 2 cut(s) | 440, 859 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 21, 127, 210, 432, 802, 1129, 1261 |
| AflIII | ACRYGT | 1 cut(s) | 207 |
| AgsI | TTSAA | 7 cut(s) | 158, 232, 382, 631, 1139, 1153, 1237 |
| AjnI | CCWGG | 3 cut(s) | 351, 398, 889 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1053, 1085 |
| AluBI | AGCT | 3 cut(s) | 872, 1014, 1351 |
| AluI | AGCT | 3 cut(s) | 872, 1014, 1351 |
| Alw21I | GWGCWC | 1 cut(s) | 874 |
| Alw26I | GTCTC | 1 cut(s) | 1289 |
| AlwI | GGATC | 6 cut(s) | 717, 767, 897, 910, 1049, 1062 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 790 |
| AoxI | GGCC | 7 cut(s) | 12, 178, 669, 887, 1131, 1165, 1359 |
| ApeKI | GCWGC | 3 cut(s) | 98, 283, 1202 |
| ApoI | RAATTY | 3 cut(s) | 159, 195, 376 |
| Asp718I | GGTACC | 1 cut(s) | 857 |
| AspLEI | GCGC | 7 cut(s) | 98, 315, 361, 531, 644, 755, 790 |
| AspS9I | GGNCC | 5 cut(s) | 700, 887, 927, 962, 1303 |
| AvaII | GGWCC | 4 cut(s) | 700, 927, 962, 1303 |
| BalI | TGGCCA | 2 cut(s) | 1167, 1361 |
| BamHI | GGATCC | 2 cut(s) | 902, 1054 |
| BanI | GGYRCC | 3 cut(s) | 312, 358, 857 |
| BanII | GRGCYC | 1 cut(s) | 874 |
| BauI | CACGAG | 1 cut(s) | 1187 |
| BbsI | GAAGAC | 1 cut(s) | 35 |
| Bbv12I | GWGCWC | 1 cut(s) | 874 |
| BbvCI | CCTCAGC | 1 cut(s) | 807 |
| BbvI | GCAGC | 3 cut(s) | 85, 270, 1214 |
| BccI | CCATC | 8 cut(s) | 122, 217, 837, 986, 1045, 1086, 1106, 1370 |
| BceAI | ACGGC | 4 cut(s) | 86, 1118, 1145, 1146 |
| BciT130I | CCWGG | 3 cut(s) | 353, 400, 891 |
| BcoDI | GTCTC | 1 cut(s) | 1289 |
| BfaI | CTAG | 2 cut(s) | 252, 1199 |
| BfmI | CTRYAG | 1 cut(s) | 933 |
| BfoI | RGCGCY | 3 cut(s) | 316, 362, 791 |
| BfuAI | ACCTGC | 1 cut(s) | 322 |
| BglII | AGATCT | 1 cut(s) | 404 |
| BisI | GCNGC | 6 cut(s) | 12, 99, 284, 741, 1091, 1203 |
| BlpI | GCTNAGC | 3 cut(s) | 749, 791, 954 |
| BlsI | GCNGC | 6 cut(s) | 13, 100, 285, 742, 1092, 1204 |
| Bme1390I | CCNGG | 3 cut(s) | 353, 400, 891 |
| Bme18I | GGWCC | 4 cut(s) | 700, 927, 962, 1303 |
| BmgT120I | GGNCC | 5 cut(s) | 700, 887, 927, 962, 1303 |
| BmiI | GGNNCC | 7 cut(s) | 314, 360, 462, 859, 895, 904, 1056 |
| BmrFI | CCNGG | 3 cut(s) | 353, 400, 891 |
| BmrI | ACTGGG | 1 cut(s) | 654 |
| BmsI | GCATC | 1 cut(s) | 807 |
| BmuI | ACTGGG | 1 cut(s) | 654 |
| BpiI | GAAGAC | 1 cut(s) | 35 |
| BpmI | CTGGAG | 2 cut(s) | 421, 912 |
| Bpu10I | CCTNAGC | 1 cut(s) | 807 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 749, 791, 954 |
| BpuEI | CTTGAG | 1 cut(s) | 907 |
| Bsa29I | ATCGAT | 1 cut(s) | 1365 |
| BsaHI | GRCGYC | 3 cut(s) | 313, 359, 1277 |
| BsaI | GGTCTC | 1 cut(s) | 1289 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1262, 1292 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 21, 127, 210, 432, 802, 1129, 1261 |
| Bse118I | RCCGGY | 2 cut(s) | 21, 605 |
| Bse1I | ACTGG | 3 cut(s) | 86, 660, 1293 |
| Bse3DI | GCAATG | 2 cut(s) | 880, 1308 |
| BseBI | CCWGG | 3 cut(s) | 353, 400, 891 |
| BseCI | ATCGAT | 1 cut(s) | 1365 |
| BseGI | GGATG | 3 cut(s) | 70, 1117, 1246 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 21, 127, 210, 432, 802, 1129, 1261 |
| BseMI | GCAATG | 2 cut(s) | 880, 1308 |
| BseMII | CTCAG | 8 cut(s) | 355, 782, 791, 797, 798, 980, 1032, 1170 |
| BseNI | ACTGG | 3 cut(s) | 86, 660, 1293 |
| BseRI | GAGGAG | 1 cut(s) | 548 |
| BseX3I | CGGCCG | 2 cut(s) | 12, 1131 |
| BseXI | GCAGC | 3 cut(s) | 85, 270, 1214 |
| BseYI | CCCAGC | 2 cut(s) | 609, 743 |
| Bsh1236I | CGCG | 4 cut(s) | 446, 529, 531, 642 |
| Bsh1285I | CGRYCG | 2 cut(s) | 15, 1134 |
| BshFI | GGCC | 7 cut(s) | 14, 180, 671, 889, 1133, 1167, 1361 |
| BshNI | GGYRCC | 3 cut(s) | 312, 358, 857 |
| BshVI | ATCGAT | 1 cut(s) | 1365 |
| BsiEI | CGRYCG | 2 cut(s) | 15, 1134 |
| BsiHKAI | GWGCWC | 1 cut(s) | 874 |
| BsiSI | CCGG | 2 cut(s) | 22, 606 |
| BslFI | GGGAC | 5 cut(s) | 379, 1079, 1129, 1180, 1288 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 21, 127, 210, 432, 802, 1129, 1261 |
| BsmAI | GTCTC | 1 cut(s) | 1289 |
| BsmFI | GGGAC | 5 cut(s) | 379, 1079, 1129, 1180, 1288 |
| BsnI | GGCC | 7 cut(s) | 14, 180, 671, 889, 1133, 1167, 1361 |
| Bso31I | GGTCTC | 1 cut(s) | 1289 |
| Bsp1286I | GDGCHC | 1 cut(s) | 874 |
| Bsp143I | GATC | 7 cut(s) | 369, 404, 649, 709, 772, 902, 1054 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 749, 791, 954 |
| Bsp19I | CCATGG | 1 cut(s) | 696 |
| BspANI | GGCC | 7 cut(s) | 14, 180, 671, 889, 1133, 1167, 1361 |
| BspCNI | CTCAG | 8 cut(s) | 354, 783, 790, 796, 799, 979, 1033, 1169 |
| BspDI | ATCGAT | 1 cut(s) | 1365 |
| BspFNI | CGCG | 4 cut(s) | 446, 529, 531, 642 |
| BspLI | GGNNCC | 7 cut(s) | 314, 360, 462, 859, 895, 904, 1056 |
| BspMI | ACCTGC | 1 cut(s) | 322 |
| BspPI | GGATC | 6 cut(s) | 717, 767, 897, 910, 1049, 1062 |
| BspT107I | GGYRCC | 3 cut(s) | 312, 358, 857 |
| BspTNI | GGTCTC | 1 cut(s) | 1289 |
| BsrBI | CCGCTC | 1 cut(s) | 506 |
| BsrDI | GCAATG | 2 cut(s) | 880, 1308 |
| BsrFI | RCCGGY | 2 cut(s) | 21, 605 |
| BsrI | ACTGG | 3 cut(s) | 86, 660, 1293 |
| BssAI | RCCGGY | 2 cut(s) | 21, 605 |
| BssMI | GATC | 7 cut(s) | 369, 404, 649, 709, 772, 902, 1054 |
| BssNI | GRCGYC | 3 cut(s) | 313, 359, 1277 |
| BssSI | CACGAG | 1 cut(s) | 1187 |
| BssT1I | CCWWGG | 5 cut(s) | 124, 270, 316, 696, 1314 |
| Bst2BI | CACGAG | 1 cut(s) | 1187 |
| Bst2UI | CCWGG | 3 cut(s) | 353, 400, 891 |
| Bst4CI | ACNGT | 6 cut(s) | 7, 766, 973, 979, 985, 1120 |
| Bst6I | CTCTTC | 2 cut(s) | 53, 1079 |
| BstACI | GRCGYC | 3 cut(s) | 313, 359, 1277 |
| BstC8I | GCNNGC | 4 cut(s) | 673, 887, 1016, 1088 |
| BstDSI | CCRYGG | 3 cut(s) | 426, 696, 765 |
| BstF5I | GGATG | 3 cut(s) | 70, 1117, 1246 |
| BstFNI | CGCG | 4 cut(s) | 446, 529, 531, 642 |
| BstH2I | RGCGCY | 3 cut(s) | 316, 362, 791 |
| BstHHI | GCGC | 7 cut(s) | 98, 315, 361, 531, 644, 755, 790 |
| BstKTI | GATC | 7 cut(s) | 372, 407, 652, 712, 775, 905, 1057 |
| BstMAI | GTCTC | 1 cut(s) | 1289 |
| BstMBI | GATC | 7 cut(s) | 369, 404, 649, 709, 772, 902, 1054 |
| BstMCI | CGRYCG | 2 cut(s) | 15, 1134 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 177, 535, 1225, 1348 |
| BstNI | CCWGG | 3 cut(s) | 353, 400, 891 |
| BstNSI | RCATGY | 2 cut(s) | 211, 736 |
| BstSCI | CCNGG | 3 cut(s) | 351, 398, 889 |
| BstSFI | CTRYAG | 1 cut(s) | 933 |
| BstUI | CGCG | 4 cut(s) | 446, 529, 531, 642 |
| BstV1I | GCAGC | 3 cut(s) | 85, 270, 1214 |
| BstV2I | GAAGAC | 1 cut(s) | 35 |
| BstX2I | RGATCY | 4 cut(s) | 404, 709, 902, 1054 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 697 |
| BstYI | RGATCY | 4 cut(s) | 404, 709, 902, 1054 |
| BstZI | CGGCCG | 2 cut(s) | 12, 1131 |
| Bsu15I | ATCGAT | 1 cut(s) | 1365 |
| BsuRI | GGCC | 7 cut(s) | 14, 180, 671, 889, 1133, 1167, 1361 |
| BsuTUI | ATCGAT | 1 cut(s) | 1365 |
| BtgI | CCRYGG | 3 cut(s) | 426, 696, 765 |
| BtgZI | GCGATG | 1 cut(s) | 553 |
| BtsCI | GGATG | 3 cut(s) | 70, 1117, 1246 |
| BtsI | GCAGTG | 1 cut(s) | 837 |
| BtsIMutI | CAGTG | 1 cut(s) | 837 |
| BveI | ACCTGC | 1 cut(s) | 322 |
| Cac8I | GCNNGC | 4 cut(s) | 673, 887, 1016, 1088 |
| CaiI | CAGNNNCTG | 1 cut(s) | 790 |
| CfoI | GCGC | 7 cut(s) | 98, 315, 361, 531, 644, 755, 790 |
| Cfr10I | RCCGGY | 2 cut(s) | 21, 605 |
| Cfr13I | GGNCC | 5 cut(s) | 700, 887, 927, 962, 1303 |
| ClaI | ATCGAT | 1 cut(s) | 1365 |
| CseI | GACGC | 3 cut(s) | 63, 452, 1194 |
| Csp6I | GTAC | 2 cut(s) | 439, 858 |
| CviAII | CATG | 3 cut(s) | 208, 697, 733 |
| CviQI | GTAC | 2 cut(s) | 439, 858 |
| DinI | GGCGCC | 2 cut(s) | 314, 360 |
| DpnI | GATC | 7 cut(s) | 371, 406, 651, 711, 774, 904, 1056 |
| DpnII | GATC | 7 cut(s) | 369, 404, 649, 709, 772, 902, 1054 |
| DraIII | CACNNNGTG | 1 cut(s) | 432 |
| EaeI | YGGCCR | 4 cut(s) | 12, 1131, 1165, 1359 |
| EagI | CGGCCG | 2 cut(s) | 12, 1131 |
| Eam1104I | CTCTTC | 2 cut(s) | 53, 1079 |
| EarI | CTCTTC | 2 cut(s) | 53, 1079 |
| EciI | GGCGGA | 4 cut(s) | 110, 895, 1112, 1349 |
| Ecl136II | GAGCTC | 1 cut(s) | 872 |
| EclXI | CGGCCG | 2 cut(s) | 12, 1131 |
| Eco130I | CCWWGG | 5 cut(s) | 124, 270, 316, 696, 1314 |
| Eco24I | GRGCYC | 1 cut(s) | 874 |
| Eco31I | GGTCTC | 1 cut(s) | 1289 |
| Eco47I | GGWCC | 4 cut(s) | 700, 927, 962, 1303 |
| Eco52I | CGGCCG | 2 cut(s) | 12, 1131 |
| Eco53kI | GAGCTC | 1 cut(s) | 872 |
| Eco57I | CTGAAG | 1 cut(s) | 47 |
| EcoICRI | GAGCTC | 1 cut(s) | 872 |
| EcoO109I | RGGNCCY | 3 cut(s) | 927, 962, 1303 |
| EcoRII | CCWGG | 3 cut(s) | 351, 398, 889 |
| EcoT14I | CCWWGG | 5 cut(s) | 124, 270, 316, 696, 1314 |
| EcoT38I | GRGCYC | 1 cut(s) | 874 |
| EgeI | GGCGCC | 2 cut(s) | 314, 360 |
| EheI | GGCGCC | 2 cut(s) | 314, 360 |
| ErhI | CCWWGG | 5 cut(s) | 124, 270, 316, 696, 1314 |
| FaeI | CATG | 3 cut(s) | 211, 700, 736 |
| FaqI | GGGAC | 5 cut(s) | 379, 1079, 1129, 1180, 1288 |
| FatI | CATG | 3 cut(s) | 207, 696, 732 |
| FauI | CCCGC | 4 cut(s) | 24, 439, 499, 878 |
| Fnu4HI | GCNGC | 6 cut(s) | 12, 99, 284, 741, 1091, 1203 |
| FokI | GGATG | 3 cut(s) | 77, 1124, 1253 |
| FriOI | GRGCYC | 1 cut(s) | 874 |
| Fsp4HI | GCNGC | 6 cut(s) | 12, 99, 284, 741, 1091, 1203 |
| FspBI | CTAG | 2 cut(s) | 252, 1199 |
| GlaI | GCGC | 7 cut(s) | 97, 314, 360, 530, 643, 754, 789 |
| GluI | GCNGC | 6 cut(s) | 12, 99, 284, 741, 1091, 1203 |
| GsaI | CCCAGC | 2 cut(s) | 613, 747 |
| GsuI | CTGGAG | 2 cut(s) | 421, 912 |
| HaeII | RGCGCY | 3 cut(s) | 316, 362, 791 |
| HaeIII | GGCC | 7 cut(s) | 14, 180, 671, 889, 1133, 1167, 1361 |
| HapII | CCGG | 2 cut(s) | 22, 606 |
| HgaI | GACGC | 3 cut(s) | 63, 452, 1194 |
| HhaI | GCGC | 7 cut(s) | 98, 315, 361, 531, 644, 755, 790 |
| Hin1I | GRCGYC | 3 cut(s) | 313, 359, 1277 |
| Hin1II | CATG | 3 cut(s) | 211, 700, 736 |
| Hin6I | GCGC | 7 cut(s) | 96, 313, 359, 529, 642, 753, 788 |
| HinP1I | GCGC | 7 cut(s) | 96, 313, 359, 529, 642, 753, 788 |
| HincII | GTYRAC | 2 cut(s) | 19, 525 |
| HindII | GTYRAC | 2 cut(s) | 19, 525 |
| HinfI | GANTC | 6 cut(s) | 337, 386, 637, 781, 1022, 1327 |
| HpaI | GTTAAC | 2 cut(s) | 19, 525 |
| HpaII | CCGG | 2 cut(s) | 22, 606 |
| Hpy166II | GTNNAC | 4 cut(s) | 19, 106, 519, 525 |
| Hpy188I | TCNGA | 6 cut(s) | 267, 503, 780, 802, 969, 1033 |
| Hpy188III | TCNNGA | 5 cut(s) | 107, 373, 587, 1048, 1058 |
| Hpy8I | GTNNAC | 4 cut(s) | 19, 106, 519, 525 |
| Hpy99I | CGWCG | 6 cut(s) | 351, 446, 866, 1150, 1210, 1282 |
| HpyAV | CCTTC | 5 cut(s) | 376, 421, 593, 602, 1231 |
| HpyCH4III | ACNGT | 6 cut(s) | 7, 766, 973, 979, 985, 1120 |
| HpyCH4IV | ACGT | 2 cut(s) | 521, 1277 |
| HpyCH4V | TGCA | 7 cut(s) | 171, 185, 286, 715, 1086, 1186, 1250 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 177, 535, 1225, 1348 |
| HpySE526I | ACGT | 2 cut(s) | 521, 1277 |
| Hsp92I | GRCGYC | 3 cut(s) | 313, 359, 1277 |
| Hsp92II | CATG | 3 cut(s) | 211, 700, 736 |
| HspAI | GCGC | 7 cut(s) | 96, 313, 359, 529, 642, 753, 788 |
| KasI | GGCGCC | 2 cut(s) | 312, 358 |
| KpnI | GGTACC | 1 cut(s) | 861 |
| KspAI | GTTAAC | 2 cut(s) | 19, 525 |
| Kzo9I | GATC | 7 cut(s) | 369, 404, 649, 709, 772, 902, 1054 |
| LmnI | GCTCC | 4 cut(s) | 535, 869, 893, 1225 |
| Lsp1109I | GCAGC | 3 cut(s) | 85, 270, 1214 |
| LweI | GCATC | 1 cut(s) | 807 |
| MaeI | CTAG | 2 cut(s) | 252, 1199 |
| MaeII | ACGT | 2 cut(s) | 521, 1277 |
| MaeIII | GTNAC | 5 cut(s) | 130, 662, 973, 979, 985 |
| MalI | GATC | 7 cut(s) | 371, 406, 651, 711, 774, 904, 1056 |
| MbiI | CCGCTC | 1 cut(s) | 506 |
| MboI | GATC | 7 cut(s) | 369, 404, 649, 709, 772, 902, 1054 |
| MboII | GAAGA | 8 cut(s) | 35, 70, 109, 146, 583, 950, 1066, 1294 |
| MflI | RGATCY | 4 cut(s) | 404, 709, 902, 1054 |
| MhlI | GDGCHC | 1 cut(s) | 874 |
| MlsI | TGGCCA | 2 cut(s) | 1167, 1361 |
| MluCI | AATT | 9 cut(s) | 159, 195, 365, 376, 555, 632, 1232, 1245, 1265 |
| MluNI | TGGCCA | 2 cut(s) | 1167, 1361 |
| Mly113I | GGCGCC | 2 cut(s) | 313, 359 |
| MlyI | GAGTC | 3 cut(s) | 631, 775, 1016 |
| MmeI | TCCRAC | 2 cut(s) | 517, 1056 |
| Mox20I | TGGCCA | 2 cut(s) | 1167, 1361 |
| MscI | TGGCCA | 2 cut(s) | 1167, 1361 |
| MseI | TTAA | 3 cut(s) | 18, 480, 524 |
| MslI | CAYNNNNRTG | 1 cut(s) | 291 |
| Msp20I | TGGCCA | 2 cut(s) | 1167, 1361 |
| MspA1I | CMGCKG | 2 cut(s) | 743, 1014 |
| MspI | CCGG | 2 cut(s) | 22, 606 |
| MspR9I | CCNGG | 3 cut(s) | 353, 400, 891 |
| MvaI | CCWGG | 3 cut(s) | 353, 400, 891 |
| MvnI | CGCG | 4 cut(s) | 446, 529, 531, 642 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 177, 535, 1225, 1348 |
| NarI | GGCGCC | 2 cut(s) | 313, 359 |
| NcoI | CCATGG | 1 cut(s) | 696 |
| NdeII | GATC | 7 cut(s) | 369, 404, 649, 709, 772, 902, 1054 |
| NlaIII | CATG | 3 cut(s) | 211, 700, 736 |
| NlaIV | GGNNCC | 7 cut(s) | 314, 360, 462, 859, 895, 904, 1056 |
| NmeAIII | GCCGAG | 2 cut(s) | 868, 934 |
| NmuCI | GTSAC | 4 cut(s) | 130, 973, 979, 985 |
| NspI | RCATGY | 2 cut(s) | 211, 736 |
| PaqCI | CACCTGC | 1 cut(s) | 322 |
| PciI | ACATGT | 1 cut(s) | 207 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 840 |
| PfeI | GAWTC | 3 cut(s) | 337, 386, 1327 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 210, 432 |
| PkrI | GCNGC | 6 cut(s) | 13, 100, 285, 742, 1092, 1204 |
| PleI | GAGTC | 3 cut(s) | 631, 775, 1016 |
| PluTI | GGCGCC | 2 cut(s) | 316, 362 |
| PpsI | GAGTC | 3 cut(s) | 631, 775, 1016 |
| PpuMI | RGGWCCY | 3 cut(s) | 927, 962, 1303 |
| PscI | ACATGT | 1 cut(s) | 207 |
| Psp124BI | GAGCTC | 1 cut(s) | 874 |
| Psp5II | RGGWCCY | 3 cut(s) | 927, 962, 1303 |
| Psp6I | CCWGG | 3 cut(s) | 351, 398, 889 |
| PspFI | CCCAGC | 2 cut(s) | 609, 743 |
| PspGI | CCWGG | 3 cut(s) | 351, 398, 889 |
| PspN4I | GGNNCC | 7 cut(s) | 314, 360, 462, 859, 895, 904, 1056 |
| PspPI | GGNCC | 5 cut(s) | 700, 887, 927, 962, 1303 |
| PspPPI | RGGWCCY | 3 cut(s) | 927, 962, 1303 |
| PstNI | CAGNNNCTG | 1 cut(s) | 790 |
| PsuI | RGATCY | 4 cut(s) | 404, 709, 902, 1054 |
| PvuII | CAGCTG | 1 cut(s) | 1014 |
| RsaI | GTAC | 2 cut(s) | 440, 859 |
| RsaNI | GTAC | 2 cut(s) | 439, 858 |
| RseI | CAYNNNNRTG | 1 cut(s) | 291 |
| SacI | GAGCTC | 1 cut(s) | 874 |
| SaqAI | TTAA | 3 cut(s) | 18, 480, 524 |
| SatI | GCNGC | 6 cut(s) | 12, 99, 284, 741, 1091, 1203 |
| Sau3AI | GATC | 7 cut(s) | 369, 404, 649, 709, 772, 902, 1054 |
| Sau96I | GGNCC | 5 cut(s) | 700, 887, 927, 962, 1303 |
| SchI | GAGTC | 3 cut(s) | 631, 775, 1016 |
| ScrFI | CCNGG | 3 cut(s) | 353, 400, 891 |
| SduI | GDGCHC | 1 cut(s) | 874 |
| SfaNI | GCATC | 1 cut(s) | 807 |
| SfcI | CTRYAG | 1 cut(s) | 933 |
| SfoI | GGCGCC | 2 cut(s) | 314, 360 |
| SinI | GGWCC | 4 cut(s) | 700, 927, 962, 1303 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 291 |
| SmlI | CTYRAG | 1 cut(s) | 922 |
| SmoI | CTYRAG | 1 cut(s) | 922 |
| Sse9I | AATT | 9 cut(s) | 159, 195, 365, 376, 555, 632, 1232, 1245, 1265 |
| SspDI | GGCGCC | 2 cut(s) | 312, 358 |
| SspMI | CTAG | 2 cut(s) | 252, 1199 |
| SstI | GAGCTC | 1 cut(s) | 874 |
| StyD4I | CCNGG | 3 cut(s) | 351, 398, 889 |
| StyI | CCWWGG | 5 cut(s) | 124, 270, 316, 696, 1314 |
| TaaI | ACNGT | 6 cut(s) | 7, 766, 973, 979, 985, 1120 |
| TaiI | ACGT | 2 cut(s) | 524, 1280 |
| TaqI | TCGA | 5 cut(s) | 372, 389, 1208, 1280, 1365 |
| TaqII | GACCGA | 1 cut(s) | 1313 |
| TasI | AATT | 9 cut(s) | 159, 195, 365, 376, 555, 632, 1232, 1245, 1265 |
| TauI | GCSGC | 3 cut(s) | 14, 743, 1093 |
| TfiI | GAWTC | 3 cut(s) | 337, 386, 1327 |
| Tru1I | TTAA | 3 cut(s) | 18, 480, 524 |
| Tru9I | TTAA | 3 cut(s) | 18, 480, 524 |
| TscAI | CASTG | 1 cut(s) | 844 |
| TseFI | GTSAC | 4 cut(s) | 130, 973, 979, 985 |
| TseI | GCWGC | 3 cut(s) | 98, 283, 1202 |
| Tsp45I | GTSAC | 4 cut(s) | 130, 973, 979, 985 |
| TspDTI | ATGAA | 2 cut(s) | 309, 1257 |
| TspRI | CASTG | 1 cut(s) | 844 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 210, 432 |
| VpaK11BI | GGWCC | 4 cut(s) | 700, 927, 962, 1303 |
| XapI | RAATTY | 3 cut(s) | 159, 195, 376 |
| XceI | RCATGY | 2 cut(s) | 211, 736 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 323, 887, 1175 |
| XspI | CTAG | 2 cut(s) | 252, 1199 |
| ZraI | GACGTC | 1 cut(s) | 1278 |