Cytosolic purine
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1296 |
| Acc36I | ACCTGC | 1 cut(s) | 1444 |
| AccB1I | GGYRCC | 2 cut(s) | 335, 1564 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 159, 541, 588 |
| AccBSI | CCGCTC | 4 cut(s) | 884, 1309, 1627, 1864 |
| AccI | GTMKAC | 2 cut(s) | 345, 896 |
| AccII | CGCG | 7 cut(s) | 62, 237, 909, 924, 1083, 1085, 1687 |
| AclWI | GGATC | 1 cut(s) | 941 |
| AcoI | YGGCCR | 2 cut(s) | 477, 1986 |
| AcsI | RAATTY | 1 cut(s) | 551 |
| AcuI | CTGAAG | 1 cut(s) | 1989 |
| AcyI | GRCGYC | 3 cut(s) | 452, 1565, 1769 |
| AfaI | GTAC | 4 cut(s) | 660, 683, 968, 1978 |
| AfeI | AGCGCT | 1 cut(s) | 1285 |
| AflIII | ACRYGT | 2 cut(s) | 585, 1755 |
| AgeI | ACCGGT | 1 cut(s) | 983 |
| AgsI | TTSAA | 4 cut(s) | 1028, 1067, 1337, 2008 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 769 |
| AhlI | ACTAGT | 1 cut(s) | 997 |
| AjiI | CACGTC | 1 cut(s) | 1489 |
| AjnI | CCWGG | 9 cut(s) | 38, 158, 327, 540, 629, 824, 929, 1315, 1782 |
| Alw21I | GWGCWC | 3 cut(s) | 200, 739, 1800 |
| Alw26I | GTCTC | 5 cut(s) | 1100, 1151, 1358, 1823, 1843 |
| AlwI | GGATC | 1 cut(s) | 941 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1144, 1783 |
| Ama87I | CYCGRG | 1 cut(s) | 1154 |
| Aor51HI | AGCGCT | 1 cut(s) | 1285 |
| ApaI | GGGCCC | 1 cut(s) | 1507 |
| ApoI | RAATTY | 1 cut(s) | 551 |
| AsiGI | ACCGGT | 1 cut(s) | 983 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 660 |
| AsuC2I | CCSGG | 3 cut(s) | 411, 1038, 1420 |
| AsuHPI | GGTGA | 9 cut(s) | 221, 430, 1235, 1408, 1414, 1507, 1634, 1942, 1958 |
| AvaI | CYCGRG | 1 cut(s) | 1154 |
| AvaII | GGWCC | 3 cut(s) | 786, 1078, 1410 |
| AxyI | CCTNAGG | 1 cut(s) | 1961 |
| BaeGI | GKGCMC | 1 cut(s) | 1507 |
| BanI | GGYRCC | 2 cut(s) | 335, 1564 |
| BanII | GRGCYC | 4 cut(s) | 200, 416, 1507, 1800 |
| Bbv12I | GWGCWC | 3 cut(s) | 200, 739, 1800 |
| BccI | CCATC | 7 cut(s) | 161, 326, 884, 1223, 1224, 1613, 1650 |
| BceAI | ACGGC | 5 cut(s) | 326, 453, 464, 1556, 1670 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 325, 359 |
| BciT130I | CCWGG | 9 cut(s) | 40, 160, 329, 542, 631, 826, 931, 1317, 1784 |
| BcnI | CCSGG | 3 cut(s) | 411, 1038, 1420 |
| BcoDI | GTCTC | 5 cut(s) | 1100, 1151, 1358, 1823, 1843 |
| BcuI | ACTAGT | 1 cut(s) | 997 |
| BfaI | CTAG | 6 cut(s) | 131, 201, 231, 998, 1658, 1673 |
| BfmI | CTRYAG | 1 cut(s) | 1287 |
| BfoI | RGCGCY | 5 cut(s) | 694, 1169, 1287, 1436, 1568 |
| BfuAI | ACCTGC | 1 cut(s) | 1444 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1262 |
| BlpI | GCTNAGC | 1 cut(s) | 1169 |
| BmcAI | AGTACT | 1 cut(s) | 660 |
| Bme18I | GGWCC | 3 cut(s) | 786, 1078, 1410 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 769 |
| BmeT110I | CYCGRG | 1 cut(s) | 1154 |
| BmgBI | CACGTC | 1 cut(s) | 1489 |
| BmsI | GCATC | 1 cut(s) | 1302 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1145 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 498, 530, 1571, 1603 |
| BpmI | CTGGAG | 4 cut(s) | 311, 1124, 1457, 1805 |
| Bpu10I | CCTNAGC | 2 cut(s) | 719, 1799 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1169 |
| BpuMI | CCSGG | 3 cut(s) | 411, 1038, 1420 |
| BsaAI | YACGTR | 1 cut(s) | 685 |
| BsaHI | GRCGYC | 3 cut(s) | 452, 1565, 1769 |
| BsaI | GGTCTC | 2 cut(s) | 1100, 1823 |
| BsaWI | WCCGGW | 2 cut(s) | 402, 983 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1097, 1127 |
| Bse118I | RCCGGY | 4 cut(s) | 983, 1237, 1357, 1393 |
| Bse1I | ACTGG | 4 cut(s) | 782, 1167, 1174, 1857 |
| Bse21I | CCTNAGG | 1 cut(s) | 1961 |
| Bse3DI | GCAATG | 2 cut(s) | 612, 1080 |
| BseBI | CCWGG | 9 cut(s) | 40, 160, 329, 542, 631, 826, 931, 1317, 1784 |
| BseGI | GGATG | 7 cut(s) | 153, 337, 369, 448, 876, 1234, 1317 |
| BseMI | GCAATG | 2 cut(s) | 612, 1080 |
| BseMII | CTCAG | 6 cut(s) | 300, 710, 1160, 1813, 1917, 1952 |
| BseNI | ACTGG | 4 cut(s) | 782, 1167, 1174, 1857 |
| BseRI | GAGGAG | 3 cut(s) | 929, 1400, 1874 |
| BseSI | GKGCMC | 1 cut(s) | 1507 |
| BseX3I | CGGCCG | 2 cut(s) | 477, 1986 |
| BseYI | CCCAGC | 3 cut(s) | 278, 463, 1134 |
| BsgI | GTGCAG | 2 cut(s) | 1265, 1919 |
| Bsh1236I | CGCG | 7 cut(s) | 62, 237, 909, 924, 1083, 1085, 1687 |
| Bsh1285I | CGRYCG | 2 cut(s) | 480, 1989 |
| BshNI | GGYRCC | 2 cut(s) | 335, 1564 |
| BshTI | ACCGGT | 1 cut(s) | 983 |
| BsiEI | CGRYCG | 2 cut(s) | 480, 1989 |
| BsiHKAI | GWGCWC | 3 cut(s) | 200, 739, 1800 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1154 |
| BsiSI | CCGG | 9 cut(s) | 403, 410, 984, 1037, 1187, 1238, 1358, 1394, 1419 |
| BslFI | GGGAC | 3 cut(s) | 776, 799, 900 |
| BsmAI | GTCTC | 5 cut(s) | 1100, 1151, 1358, 1823, 1843 |
| BsmFI | GGGAC | 3 cut(s) | 776, 799, 900 |
| BsmI | GAATGC | 2 cut(s) | 310, 2003 |
| Bso31I | GGTCTC | 2 cut(s) | 1100, 1823 |
| BsoBI | CYCGRG | 1 cut(s) | 1154 |
| Bsp120I | GGGCCC | 1 cut(s) | 1503 |
| Bsp1286I | GDGCHC | 5 cut(s) | 200, 416, 739, 1507, 1800 |
| Bsp143I | GATC | 3 cut(s) | 747, 933, 1497 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1169 |
| Bsp68I | TCGCGA | 1 cut(s) | 909 |
| BspCNI | CTCAG | 6 cut(s) | 301, 711, 1161, 1812, 1918, 1953 |
| BspFNI | CGCG | 7 cut(s) | 62, 237, 909, 924, 1083, 1085, 1687 |
| BspHI | TCATGA | 1 cut(s) | 1611 |
| BspMAI | CTGCAG | 1 cut(s) | 1291 |
| BspMI | ACCTGC | 1 cut(s) | 1444 |
| BspPI | GGATC | 1 cut(s) | 941 |
| BspT107I | GGYRCC | 2 cut(s) | 335, 1564 |
| BspTNI | GGTCTC | 2 cut(s) | 1100, 1823 |
| BsrBI | CCGCTC | 4 cut(s) | 884, 1309, 1627, 1864 |
| BsrDI | GCAATG | 2 cut(s) | 612, 1080 |
| BsrFI | RCCGGY | 4 cut(s) | 983, 1237, 1357, 1393 |
| BsrI | ACTGG | 4 cut(s) | 782, 1167, 1174, 1857 |
| BssAI | RCCGGY | 4 cut(s) | 983, 1237, 1357, 1393 |
| BssMI | GATC | 3 cut(s) | 747, 933, 1497 |
| BssNAI | GTATAC | 1 cut(s) | 897 |
| BssNI | GRCGYC | 3 cut(s) | 452, 1565, 1769 |
| BssT1I | CCWWGG | 6 cut(s) | 502, 730, 1379, 1470, 1813, 1875 |
| Bst1107I | GTATAC | 1 cut(s) | 897 |
| Bst2UI | CCWGG | 9 cut(s) | 40, 160, 329, 542, 631, 826, 931, 1317, 1784 |
| Bst4CI | ACNGT | 4 cut(s) | 379, 618, 649, 1369 |
| Bst6I | CTCTTC | 3 cut(s) | 906, 1470, 1643 |
| BstACI | GRCGYC | 3 cut(s) | 452, 1565, 1769 |
| BstBAI | YACGTR | 1 cut(s) | 685 |
| BstC8I | GCNNGC | 9 cut(s) | 253, 268, 431, 947, 1128, 1248, 1267, 1507, 1569 |
| BstDEI | CTNAG | 7 cut(s) | 309, 719, 758, 1169, 1799, 1926, 1961 |
| BstDSI | CCRYGG | 2 cut(s) | 801, 1692 |
| BstEII | GGTNACC | 1 cut(s) | 1951 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1337, 1787 |
| BstF5I | GGATG | 7 cut(s) | 153, 337, 369, 448, 876, 1234, 1317 |
| BstFNI | CGCG | 7 cut(s) | 62, 237, 909, 924, 1083, 1085, 1687 |
| BstH2I | RGCGCY | 5 cut(s) | 694, 1169, 1287, 1436, 1568 |
| BstKTI | GATC | 3 cut(s) | 750, 936, 1500 |
| BstMAI | GTCTC | 5 cut(s) | 1100, 1151, 1358, 1823, 1843 |
| BstMBI | GATC | 3 cut(s) | 747, 933, 1497 |
| BstMCI | CGRYCG | 2 cut(s) | 480, 1989 |
| BstNI | CCWGG | 9 cut(s) | 40, 160, 329, 542, 631, 826, 931, 1317, 1784 |
| BstNSI | RCATGY | 2 cut(s) | 589, 1759 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1145 |
| BstPI | GGTNACC | 1 cut(s) | 1951 |
| BstSFI | CTRYAG | 1 cut(s) | 1287 |
| BstSLI | GKGCMC | 1 cut(s) | 1507 |
| BstUI | CGCG | 7 cut(s) | 62, 237, 909, 924, 1083, 1085, 1687 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1265 |
| BstZ17I | GTATAC | 1 cut(s) | 897 |
| BstZI | CGGCCG | 2 cut(s) | 477, 1986 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1961 |
| BtgI | CCRYGG | 2 cut(s) | 801, 1692 |
| BtrI | CACGTC | 1 cut(s) | 1489 |
| BtsCI | GGATG | 7 cut(s) | 153, 337, 369, 448, 876, 1234, 1317 |
| BtsI | GCAGTG | 2 cut(s) | 34, 116 |
| BtsIMutI | CAGTG | 5 cut(s) | 34, 116, 375, 614, 1160 |
| BtuMI | TCGCGA | 1 cut(s) | 909 |
| BveI | ACCTGC | 1 cut(s) | 1444 |
| Cac8I | GCNNGC | 9 cut(s) | 253, 268, 431, 947, 1128, 1248, 1267, 1507, 1569 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1144, 1783 |
| CciI | TCATGA | 1 cut(s) | 1611 |
| CciNI | GCGGCCGC | 1 cut(s) | 1986 |
| Cfr10I | RCCGGY | 4 cut(s) | 983, 1237, 1357, 1393 |
| CseI | GACGC | 5 cut(s) | 80, 441, 784, 1150, 1758 |
| Csp6I | GTAC | 4 cut(s) | 659, 682, 967, 1977 |
| CspAI | ACCGGT | 1 cut(s) | 983 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1309, 1344, 1681, 1716 |
| CviAII | CATG | 6 cut(s) | 104, 586, 821, 1111, 1612, 1756 |
| CviQI | GTAC | 4 cut(s) | 659, 682, 967, 1977 |
| DdeI | CTNAG | 7 cut(s) | 309, 719, 758, 1169, 1799, 1926, 1961 |
| DinI | GGCGCC | 1 cut(s) | 1566 |
| DpnI | GATC | 3 cut(s) | 749, 935, 1499 |
| DpnII | GATC | 3 cut(s) | 747, 933, 1497 |
| DriI | GACNNNNNGTC | 1 cut(s) | 769 |
| EaeI | YGGCCR | 2 cut(s) | 477, 1986 |
| EagI | CGGCCG | 2 cut(s) | 477, 1986 |
| Eam1104I | CTCTTC | 3 cut(s) | 906, 1470, 1643 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 769 |
| EarI | CTCTTC | 3 cut(s) | 906, 1470, 1643 |
| EciI | GGCGGA | 8 cut(s) | 80, 376, 455, 668, 1205, 1376, 1850, 1900 |
| Ecl136II | GAGCTC | 2 cut(s) | 198, 1798 |
| EclXI | CGGCCG | 2 cut(s) | 477, 1986 |
| Eco130I | CCWWGG | 6 cut(s) | 502, 730, 1379, 1470, 1813, 1875 |
| Eco24I | GRGCYC | 4 cut(s) | 200, 416, 1507, 1800 |
| Eco31I | GGTCTC | 2 cut(s) | 1100, 1823 |
| Eco47I | GGWCC | 3 cut(s) | 786, 1078, 1410 |
| Eco47III | AGCGCT | 1 cut(s) | 1285 |
| Eco52I | CGGCCG | 2 cut(s) | 477, 1986 |
| Eco53kI | GAGCTC | 2 cut(s) | 198, 1798 |
| Eco57I | CTGAAG | 1 cut(s) | 1989 |
| Eco81I | CCTNAGG | 1 cut(s) | 1961 |
| Eco88I | CYCGRG | 1 cut(s) | 1154 |
| Eco91I | GGTNACC | 1 cut(s) | 1951 |
| EcoICRI | GAGCTC | 2 cut(s) | 198, 1798 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1337, 1787 |
| EcoO109I | RGGNCCY | 3 cut(s) | 641, 786, 1503 |
| EcoO65I | GGTNACC | 1 cut(s) | 1951 |
| EcoRII | CCWGG | 9 cut(s) | 38, 158, 327, 540, 629, 824, 929, 1315, 1782 |
| EcoT14I | CCWWGG | 6 cut(s) | 502, 730, 1379, 1470, 1813, 1875 |
| EcoT38I | GRGCYC | 4 cut(s) | 200, 416, 1507, 1800 |
| EgeI | GGCGCC | 1 cut(s) | 1566 |
| EheI | GGCGCC | 1 cut(s) | 1566 |
| ErhI | CCWWGG | 6 cut(s) | 502, 730, 1379, 1470, 1813, 1875 |
| FaeI | CATG | 6 cut(s) | 107, 589, 824, 1114, 1615, 1759 |
| FaqI | GGGAC | 3 cut(s) | 776, 799, 900 |
| FatI | CATG | 6 cut(s) | 103, 585, 820, 1110, 1611, 1755 |
| FblI | GTMKAC | 2 cut(s) | 345, 896 |
| FokI | GGATG | 7 cut(s) | 140, 344, 376, 455, 863, 1241, 1324 |
| FriOI | GRGCYC | 4 cut(s) | 200, 416, 1507, 1800 |
| FspBI | CTAG | 6 cut(s) | 131, 201, 231, 998, 1658, 1673 |
| FspI | TGCGCA | 1 cut(s) | 1296 |
| GsaI | CCCAGC | 3 cut(s) | 282, 467, 1138 |
| GsuI | CTGGAG | 4 cut(s) | 311, 1124, 1457, 1805 |
| HaeII | RGCGCY | 5 cut(s) | 694, 1169, 1287, 1436, 1568 |
| HapII | CCGG | 9 cut(s) | 403, 410, 984, 1037, 1187, 1238, 1358, 1394, 1419 |
| HgaI | GACGC | 5 cut(s) | 80, 441, 784, 1150, 1758 |
| Hin1I | GRCGYC | 3 cut(s) | 452, 1565, 1769 |
| Hin1II | CATG | 6 cut(s) | 107, 589, 824, 1114, 1615, 1759 |
| HincII | GTYRAC | 3 cut(s) | 346, 1150, 1459 |
| HindII | GTYRAC | 3 cut(s) | 346, 1150, 1459 |
| HinfI | GANTC | 9 cut(s) | 35, 83, 311, 457, 754, 764, 1460, 1586, 1907 |
| HpaII | CCGG | 9 cut(s) | 403, 410, 984, 1037, 1187, 1238, 1358, 1394, 1419 |
| HphI | GGTGA | 9 cut(s) | 221, 430, 1235, 1408, 1414, 1507, 1634, 1942, 1958 |
| Hpy166II | GTNNAC | 7 cut(s) | 346, 484, 682, 715, 897, 1150, 1459 |
| Hpy188I | TCNGA | 8 cut(s) | 46, 573, 865, 881, 938, 974, 981, 1180 |
| Hpy188III | TCNNGA | 6 cut(s) | 191, 751, 908, 1103, 1612, 1822 |
| Hpy8I | GTNNAC | 7 cut(s) | 346, 484, 682, 715, 897, 1150, 1459 |
| Hpy99I | CGWCG | 8 cut(s) | 242, 347, 350, 439, 457, 800, 1452, 1540 |
| HpyAV | CCTTC | 9 cut(s) | 442, 574, 799, 833, 1339, 1343, 1513, 1837, 1964 |
| HpyCH4III | ACNGT | 4 cut(s) | 379, 618, 649, 1369 |
| HpyCH4IV | ACGT | 5 cut(s) | 9, 398, 684, 1447, 1488 |
| HpyCH4V | TGCA | 7 cut(s) | 107, 702, 1246, 1289, 1354, 1750, 1900 |
| HpyF3I | CTNAG | 7 cut(s) | 309, 719, 758, 1169, 1799, 1926, 1961 |
| HpySE526I | ACGT | 5 cut(s) | 9, 398, 684, 1447, 1488 |
| Hsp92I | GRCGYC | 3 cut(s) | 452, 1565, 1769 |
| Hsp92II | CATG | 6 cut(s) | 107, 589, 824, 1114, 1615, 1759 |
| KasI | GGCGCC | 1 cut(s) | 1564 |
| Kzo9I | GATC | 3 cut(s) | 747, 933, 1497 |
| LmnI | GCTCC | 8 cut(s) | 278, 734, 1192, 1306, 1387, 1537, 1795, 1861 |
| LweI | GCATC | 1 cut(s) | 1302 |
| MaeI | CTAG | 6 cut(s) | 131, 201, 231, 998, 1658, 1673 |
| MaeII | ACGT | 5 cut(s) | 9, 398, 684, 1447, 1488 |
| MaeIII | GTNAC | 6 cut(s) | 379, 508, 993, 1040, 1402, 1951 |
| MalI | GATC | 3 cut(s) | 749, 935, 1499 |
| MbiI | CCGCTC | 4 cut(s) | 884, 1309, 1627, 1864 |
| MboI | GATC | 3 cut(s) | 747, 933, 1497 |
| MboII | GAAGA | 6 cut(s) | 296, 299, 923, 1487, 1528, 1630 |
| MhlI | GDGCHC | 5 cut(s) | 200, 416, 739, 1507, 1800 |
| MluCI | AATT | 3 cut(s) | 551, 958, 1698 |
| Mly113I | GGCGCC | 1 cut(s) | 1565 |
| MlyI | GAGTC | 5 cut(s) | 320, 758, 1454, 1580, 1916 |
| MmeI | TCCRAC | 3 cut(s) | 843, 895, 997 |
| MroXI | GAANNNNTTC | 1 cut(s) | 660 |
| MseI | TTAA | 3 cut(s) | 852, 858, 1998 |
| MslI | CAYNNNNRTG | 4 cut(s) | 386, 1221, 1760, 1895 |
| MspI | CCGG | 9 cut(s) | 403, 410, 984, 1037, 1187, 1238, 1358, 1394, 1419 |
| Mva1269I | GAATGC | 2 cut(s) | 310, 2003 |
| MvaI | CCWGG | 9 cut(s) | 40, 160, 329, 542, 631, 826, 931, 1317, 1784 |
| MvnI | CGCG | 7 cut(s) | 62, 237, 909, 924, 1083, 1085, 1687 |
| NarI | GGCGCC | 1 cut(s) | 1565 |
| NciI | CCSGG | 3 cut(s) | 411, 1038, 1420 |
| NdeII | GATC | 3 cut(s) | 747, 933, 1497 |
| NlaIII | CATG | 6 cut(s) | 107, 589, 824, 1114, 1615, 1759 |
| NmeAIII | GCCGAG | 4 cut(s) | 719, 1144, 1621, 1700 |
| NmuCI | GTSAC | 3 cut(s) | 379, 508, 1402 |
| NotI | GCGGCCGC | 1 cut(s) | 1986 |
| NruI | TCGCGA | 1 cut(s) | 909 |
| NsbI | TGCGCA | 1 cut(s) | 1296 |
| NspI | RCATGY | 2 cut(s) | 589, 1759 |
| PagI | TCATGA | 1 cut(s) | 1611 |
| PasI | CCCWGGG | 1 cut(s) | 159 |
| PciI | ACATGT | 2 cut(s) | 585, 1755 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 184, 1758 |
| PctI | GAATGC | 2 cut(s) | 310, 2003 |
| PdmI | GAANNNNTTC | 1 cut(s) | 660 |
| PfeI | GAWTC | 4 cut(s) | 35, 83, 457, 754 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 159, 541, 588 |
| PfoI | TCCNGGA | 1 cut(s) | 327 |
| PinAI | ACCGGT | 1 cut(s) | 983 |
| PleI | GAGTC | 5 cut(s) | 319, 758, 1454, 1580, 1915 |
| PluTI | GGCGCC | 1 cut(s) | 1568 |
| PpsI | GAGTC | 5 cut(s) | 319, 758, 1454, 1580, 1915 |
| Ppu21I | YACGTR | 1 cut(s) | 685 |
| PpuMI | RGGWCCY | 1 cut(s) | 786 |
| PscI | ACATGT | 2 cut(s) | 585, 1755 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1145 |
| Psp124BI | GAGCTC | 2 cut(s) | 200, 1800 |
| Psp5II | RGGWCCY | 1 cut(s) | 786 |
| Psp6I | CCWGG | 9 cut(s) | 38, 158, 327, 540, 629, 824, 929, 1315, 1782 |
| PspEI | GGTNACC | 1 cut(s) | 1951 |
| PspFI | CCCAGC | 3 cut(s) | 278, 463, 1134 |
| PspGI | CCWGG | 9 cut(s) | 38, 158, 327, 540, 629, 824, 929, 1315, 1782 |
| PspOMI | GGGCCC | 1 cut(s) | 1503 |
| PspPPI | RGGWCCY | 1 cut(s) | 786 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1592, 1624 |
| PstI | CTGCAG | 1 cut(s) | 1291 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1144, 1783 |
| PvuII | CAGCTG | 1 cut(s) | 1292 |
| RruI | TCGCGA | 1 cut(s) | 909 |
| RsaI | GTAC | 4 cut(s) | 660, 683, 968, 1978 |
| RsaNI | GTAC | 4 cut(s) | 659, 682, 967, 1977 |
| RseI | CAYNNNNRTG | 4 cut(s) | 386, 1221, 1760, 1895 |
| SacI | GAGCTC | 2 cut(s) | 200, 1800 |
| SalI | GTCGAC | 1 cut(s) | 344 |
| SaqAI | TTAA | 3 cut(s) | 852, 858, 1998 |
| Sau3AI | GATC | 3 cut(s) | 747, 933, 1497 |
| ScaI | AGTACT | 1 cut(s) | 660 |
| SchI | GAGTC | 5 cut(s) | 320, 758, 1454, 1580, 1916 |
| SduI | GDGCHC | 5 cut(s) | 200, 416, 739, 1507, 1800 |
| SfaNI | GCATC | 1 cut(s) | 1302 |
| SfcI | CTRYAG | 1 cut(s) | 1287 |
| SfoI | GGCGCC | 1 cut(s) | 1566 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1393 |
| SgrDI | CGTCGACG | 1 cut(s) | 344 |
| SinI | GGWCC | 3 cut(s) | 786, 1078, 1410 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 386, 1221, 1760, 1895 |
| SpeI | ACTAGT | 1 cut(s) | 997 |
| Sse9I | AATT | 3 cut(s) | 551, 958, 1698 |
| SspDI | GGCGCC | 1 cut(s) | 1564 |
| SspMI | CTAG | 6 cut(s) | 131, 201, 231, 998, 1658, 1673 |
| SstI | GAGCTC | 2 cut(s) | 200, 1800 |
| StyI | CCWWGG | 6 cut(s) | 502, 730, 1379, 1470, 1813, 1875 |
| TaaI | ACNGT | 4 cut(s) | 379, 618, 649, 1369 |
| TaiI | ACGT | 5 cut(s) | 12, 401, 687, 1450, 1491 |
| TaqI | TCGA | 9 cut(s) | 23, 345, 385, 455, 750, 830, 1002, 1538, 1788 |
| TaqII | GACCGA | 1 cut(s) | 557 |
| TasI | AATT | 3 cut(s) | 551, 958, 1698 |
| TatI | WGTACW | 2 cut(s) | 658, 966 |
| TfiI | GAWTC | 4 cut(s) | 35, 83, 457, 754 |
| Tru1I | TTAA | 3 cut(s) | 852, 858, 1998 |
| Tru9I | TTAA | 3 cut(s) | 852, 858, 1998 |
| TscAI | CASTG | 5 cut(s) | 34, 123, 382, 621, 1167 |
| TseFI | GTSAC | 3 cut(s) | 379, 508, 1402 |
| Tsp45I | GTSAC | 3 cut(s) | 379, 508, 1402 |
| TspDTI | ATGAA | 4 cut(s) | 380, 404, 623, 1600 |
| TspGWI | ACGGA | 3 cut(s) | 818, 1524, 1709 |
| TspRI | CASTG | 5 cut(s) | 34, 123, 382, 621, 1167 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 159, 541, 588 |
| VpaK11BI | GGWCC | 3 cut(s) | 786, 1078, 1410 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1337, 1787 |
| XapI | RAATTY | 1 cut(s) | 551 |
| XceI | RCATGY | 2 cut(s) | 589, 1759 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1217 |
| XmiI | GTMKAC | 2 cut(s) | 345, 896 |
| XmnI | GAANNNNTTC | 1 cut(s) | 660 |
| XspI | CTAG | 6 cut(s) | 131, 201, 231, 998, 1658, 1673 |
| ZrmI | AGTACT | 1 cut(s) | 660 |