Topless-related protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 277 |
| Acc16I | TGCGCA | 1 cut(s) | 2091 |
| Acc36I | ACCTGC | 2 cut(s) | 1277, 1794 |
| AccB1I | GGYRCC | 3 cut(s) | 2107, 2801, 2953 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 1239, 1618, 1945, 2811 |
| AccBSI | CCGCTC | 1 cut(s) | 1684 |
| AccI | GTMKAC | 3 cut(s) | 391, 2598, 2738 |
| AccII | CGCG | 4 cut(s) | 283, 1407, 1578, 2052 |
| AccIII | TCCGGA | 2 cut(s) | 1001, 1305 |
| AclWI | GGATC | 3 cut(s) | 1444, 1869, 2876 |
| AcoI | YGGCCR | 3 cut(s) | 289, 2580, 2849 |
| AcsI | RAATTY | 4 cut(s) | 151, 1614, 2328, 2351 |
| AcuI | CTGAAG | 4 cut(s) | 1535, 2364, 2591, 2988 |
| AcvI | CACGTG | 1 cut(s) | 821 |
| AcyI | GRCGYC | 4 cut(s) | 780, 2108, 2802, 2822 |
| AfaI | GTAC | 8 cut(s) | 46, 920, 1048, 1414, 1599, 1898, 2076, 2218 |
| AflIII | ACRYGT | 3 cut(s) | 239, 820, 1128 |
| AgeI | ACCGGT | 1 cut(s) | 2213 |
| AgsI | TTSAA | 7 cut(s) | 926, 1468, 1729, 2423, 2493, 2534, 2791 |
| AjiI | CACGTC | 1 cut(s) | 240 |
| AjnI | CCWGG | 6 cut(s) | 252, 1373, 2286, 2481, 2884, 3066 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 788, 820 |
| Alw21I | GWGCWC | 2 cut(s) | 2842, 3000 |
| Alw26I | GTCTC | 9 cut(s) | 121, 465, 487, 565, 643, 737, 1364, 2829, 3068 |
| Alw44I | GTGCAC | 1 cut(s) | 2996 |
| AlwI | GGATC | 3 cut(s) | 1444, 1869, 2876 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 474, 2702 |
| Ama87I | CYCGRG | 2 cut(s) | 1102, 2976 |
| Aor13HI | TCCGGA | 2 cut(s) | 1001, 1305 |
| ApaI | GGGCCC | 1 cut(s) | 2305 |
| ApaLI | GTGCAC | 1 cut(s) | 2996 |
| ApoI | RAATTY | 4 cut(s) | 151, 1614, 2328, 2351 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1867, 1899 |
| AseI | ATTAAT | 1 cut(s) | 744 |
| AsiGI | ACCGGT | 1 cut(s) | 2213 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2538 |
| AsuC2I | CCSGG | 9 cut(s) | 1120, 1488, 1595, 1821, 2144, 2544, 2951, 2977, 2978 |
| AsuHPI | GGTGA | 5 cut(s) | 730, 1507, 1630, 1963, 2827 |
| AsuNHI | GCTAGC | 3 cut(s) | 449, 1085, 1346 |
| AvaI | CYCGRG | 2 cut(s) | 1102, 2976 |
| AvaII | GGWCC | 6 cut(s) | 376, 2127, 2404, 2946, 3015, 3052 |
| AxyI | CCTNAGG | 2 cut(s) | 2132, 2502 |
| BaeGI | GKGCMC | 2 cut(s) | 2305, 3000 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1404, 1437 |
| BanI | GGYRCC | 3 cut(s) | 2107, 2801, 2953 |
| BanII | GRGCYC | 2 cut(s) | 2305, 3035 |
| BauI | CACGAG | 1 cut(s) | 1562 |
| BbrPI | CACGTG | 1 cut(s) | 821 |
| BbsI | GAAGAC | 7 cut(s) | 560, 638, 716, 1034, 1793, 2323, 2531 |
| Bbv12I | GWGCWC | 2 cut(s) | 2842, 3000 |
| BbvCI | CCTCAGC | 3 cut(s) | 2655, 2691, 2940 |
| BccI | CCATC | 7 cut(s) | 50, 152, 1075, 1355, 2390, 3005, 3026 |
| BceAI | ACGGC | 7 cut(s) | 276, 310, 874, 1286, 1299, 1436, 2416 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2578, 2612 |
| BciT130I | CCWGG | 6 cut(s) | 254, 1375, 2288, 2483, 2886, 3068 |
| BclI | TGATCA | 1 cut(s) | 2917 |
| BcnI | CCSGG | 9 cut(s) | 1120, 1488, 1595, 1821, 2144, 2544, 2951, 2977, 2978 |
| BcoDI | GTCTC | 9 cut(s) | 121, 465, 487, 565, 643, 737, 1364, 2829, 3068 |
| BfaI | CTAG | 7 cut(s) | 146, 450, 533, 611, 689, 1086, 1347 |
| BfmI | CTRYAG | 2 cut(s) | 2220, 2703 |
| BfoI | RGCGCY | 3 cut(s) | 2111, 2143, 2805 |
| BfuAI | ACCTGC | 2 cut(s) | 1277, 1794 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2627 |
| BglII | AGATCT | 1 cut(s) | 1098 |
| BlpI | GCTNAGC | 6 cut(s) | 464, 547, 625, 703, 1136, 1354 |
| Bme18I | GGWCC | 6 cut(s) | 376, 2127, 2404, 2946, 3015, 3052 |
| BmeT110I | CYCGRG | 2 cut(s) | 1102, 2976 |
| BmgBI | CACGTC | 1 cut(s) | 240 |
| BmrI | ACTGGG | 1 cut(s) | 2821 |
| BmsI | GCATC | 8 cut(s) | 40, 175, 423, 1031, 1285, 1668, 2521, 2548 |
| BmtI | GCTAGC | 3 cut(s) | 453, 1089, 1350 |
| BmuI | ACTGGG | 1 cut(s) | 2821 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1034, 2125 |
| BpiI | GAAGAC | 7 cut(s) | 560, 638, 716, 1034, 1793, 2323, 2531 |
| BpmI | CTGGAG | 5 cut(s) | 275, 815, 1931, 2061, 2768 |
| Bpu10I | CCTNAGC | 5 cut(s) | 2562, 2625, 2655, 2691, 2940 |
| Bpu1102I | GCTNAGC | 6 cut(s) | 464, 547, 625, 703, 1136, 1354 |
| BpuEI | CTTGAG | 2 cut(s) | 1025, 2182 |
| BpuMI | CCSGG | 9 cut(s) | 1120, 1488, 1595, 1821, 2144, 2544, 2951, 2977, 2978 |
| Bsa29I | ATCGAT | 1 cut(s) | 1439 |
| BsaAI | YACGTR | 2 cut(s) | 821, 1665 |
| BsaHI | GRCGYC | 4 cut(s) | 780, 2108, 2802, 2822 |
| BsaI | GGTCTC | 1 cut(s) | 1364 |
| BsaWI | WCCGGW | 4 cut(s) | 1001, 1305, 1706, 2213 |
| Bse118I | RCCGGY | 3 cut(s) | 67, 1553, 2213 |
| Bse1I | ACTGG | 7 cut(s) | 395, 1950, 1957, 2397, 2577, 2816, 3060 |
| Bse21I | CCTNAGG | 2 cut(s) | 2132, 2502 |
| Bse3DI | GCAATG | 3 cut(s) | 308, 1114, 1257 |
| BseAI | TCCGGA | 2 cut(s) | 1001, 1305 |
| BseBI | CCWGG | 6 cut(s) | 254, 1375, 2288, 2483, 2886, 3068 |
| BseCI | ATCGAT | 1 cut(s) | 1439 |
| BseGI | GGATG | 8 cut(s) | 190, 1300, 1525, 2278, 2401, 2563, 2601, 2938 |
| BseMI | GCAATG | 3 cut(s) | 308, 1114, 1257 |
| BseNI | ACTGG | 7 cut(s) | 395, 1950, 1957, 2397, 2577, 2816, 3060 |
| BseRI | GAGGAG | 3 cut(s) | 725, 1334, 1394 |
| BseSI | GKGCMC | 2 cut(s) | 2305, 3000 |
| BseX3I | CGGCCG | 2 cut(s) | 289, 2849 |
| BseYI | CCCAGC | 2 cut(s) | 1904, 2377 |
| BsgI | GTGCAG | 3 cut(s) | 934, 1973, 2879 |
| Bsh1236I | CGCG | 4 cut(s) | 283, 1407, 1578, 2052 |
| Bsh1285I | CGRYCG | 2 cut(s) | 292, 2852 |
| BshNI | GGYRCC | 3 cut(s) | 2107, 2801, 2953 |
| BshTI | ACCGGT | 1 cut(s) | 2213 |
| BshVI | ATCGAT | 1 cut(s) | 1439 |
| BsiEI | CGRYCG | 2 cut(s) | 292, 2852 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2842, 3000 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1102, 2976 |
| BslFI | GGGAC | 8 cut(s) | 29, 228, 389, 1560, 2113, 2413, 2959, 3028 |
| BsmAI | GTCTC | 9 cut(s) | 121, 465, 487, 565, 643, 737, 1364, 2829, 3068 |
| BsmBI | CGTCTC | 2 cut(s) | 737, 2829 |
| BsmFI | GGGAC | 8 cut(s) | 29, 228, 389, 1560, 2113, 2413, 2959, 3028 |
| BsmI | GAATGC | 3 cut(s) | 2444, 2677, 2872 |
| Bso31I | GGTCTC | 1 cut(s) | 1364 |
| BsoBI | CYCGRG | 2 cut(s) | 1102, 2976 |
| Bsp120I | GGGCCC | 1 cut(s) | 2301 |
| Bsp1286I | GDGCHC | 4 cut(s) | 2305, 2842, 3000, 3035 |
| Bsp13I | TCCGGA | 2 cut(s) | 1001, 1305 |
| Bsp143I | GATC | 7 cut(s) | 1098, 1215, 1436, 1792, 1861, 2881, 2917 |
| Bsp1720I | GCTNAGC | 6 cut(s) | 464, 547, 625, 703, 1136, 1354 |
| BspDI | ATCGAT | 1 cut(s) | 1439 |
| BspEI | TCCGGA | 2 cut(s) | 1001, 1305 |
| BspFNI | CGCG | 4 cut(s) | 283, 1407, 1578, 2052 |
| BspMI | ACCTGC | 2 cut(s) | 1277, 1794 |
| BspOI | GCTAGC | 3 cut(s) | 453, 1089, 1350 |
| BspPI | GGATC | 3 cut(s) | 1444, 1869, 2876 |
| BspT107I | GGYRCC | 3 cut(s) | 2107, 2801, 2953 |
| BspTNI | GGTCTC | 1 cut(s) | 1364 |
| BsrBI | CCGCTC | 1 cut(s) | 1684 |
| BsrDI | GCAATG | 3 cut(s) | 308, 1114, 1257 |
| BsrFI | RCCGGY | 3 cut(s) | 67, 1553, 2213 |
| BsrI | ACTGG | 7 cut(s) | 395, 1950, 1957, 2397, 2577, 2816, 3060 |
| BssAI | RCCGGY | 3 cut(s) | 67, 1553, 2213 |
| BssMI | GATC | 7 cut(s) | 1098, 1215, 1436, 1792, 1861, 2881, 2917 |
| BssNAI | GTATAC | 1 cut(s) | 2739 |
| BssNI | GRCGYC | 4 cut(s) | 780, 2108, 2802, 2822 |
| BssSI | CACGAG | 1 cut(s) | 1562 |
| BssT1I | CCWWGG | 3 cut(s) | 1238, 2583, 2925 |
| Bst1107I | GTATAC | 1 cut(s) | 2739 |
| Bst2BI | CACGAG | 1 cut(s) | 1562 |
| Bst2UI | CCWGG | 6 cut(s) | 254, 1375, 2288, 2483, 2886, 3068 |
| Bst4CI | ACNGT | 9 cut(s) | 108, 181, 274, 1209, 1340, 1412, 2015, 2261, 2404 |
| Bst6I | CTCTTC | 5 cut(s) | 510, 588, 666, 1734, 3090 |
| BstACI | GRCGYC | 4 cut(s) | 780, 2108, 2802, 2822 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 474, 2518 |
| BstBAI | YACGTR | 2 cut(s) | 821, 1665 |
| BstDSI | CCRYGG | 1 cut(s) | 2022 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2609 |
| BstF5I | GGATG | 8 cut(s) | 190, 1300, 1525, 2278, 2401, 2563, 2601, 2938 |
| BstFNI | CGCG | 4 cut(s) | 283, 1407, 1578, 2052 |
| BstH2I | RGCGCY | 3 cut(s) | 2111, 2143, 2805 |
| BstKTI | GATC | 7 cut(s) | 1101, 1218, 1439, 1795, 1864, 2884, 2920 |
| BstMAI | GTCTC | 9 cut(s) | 121, 465, 487, 565, 643, 737, 1364, 2829, 3068 |
| BstMBI | GATC | 7 cut(s) | 1098, 1215, 1436, 1792, 1861, 2881, 2917 |
| BstMCI | CGRYCG | 2 cut(s) | 292, 2852 |
| BstNI | CCWGG | 6 cut(s) | 254, 1375, 2288, 2483, 2886, 3068 |
| BstNSI | RCATGY | 4 cut(s) | 1132, 1553, 1561, 1897 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1034, 2125 |
| BstSFI | CTRYAG | 2 cut(s) | 2220, 2703 |
| BstSLI | GKGCMC | 2 cut(s) | 2305, 3000 |
| BstUI | CGCG | 4 cut(s) | 283, 1407, 1578, 2052 |
| BstV2I | GAAGAC | 7 cut(s) | 560, 638, 716, 1034, 1793, 2323, 2531 |
| BstX2I | RGATCY | 1 cut(s) | 1098 |
| BstXI | CCANNNNNNTGG | 5 cut(s) | 825, 1858, 2575, 2989, 3067 |
| BstYI | RGATCY | 1 cut(s) | 1098 |
| BstZ17I | GTATAC | 1 cut(s) | 2739 |
| BstZI | CGGCCG | 2 cut(s) | 289, 2849 |
| Bsu15I | ATCGAT | 1 cut(s) | 1439 |
| Bsu36I | CCTNAGG | 2 cut(s) | 2132, 2502 |
| BsuTUI | ATCGAT | 1 cut(s) | 1439 |
| BtgI | CCRYGG | 1 cut(s) | 2022 |
| BtrI | CACGTC | 1 cut(s) | 240 |
| BtsCI | GGATG | 8 cut(s) | 190, 1300, 1525, 2278, 2401, 2563, 2601, 2938 |
| BtsI | GCAGTG | 1 cut(s) | 3036 |
| BtsIMutI | CAGTG | 6 cut(s) | 186, 402, 1943, 2266, 2877, 3036 |
| BveI | ACCTGC | 2 cut(s) | 1277, 1794 |
| CaiI | CAGNNNCTG | 2 cut(s) | 474, 2702 |
| Cfr10I | RCCGGY | 3 cut(s) | 67, 1553, 2213 |
| Cfr9I | CCCGGG | 1 cut(s) | 2976 |
| ClaI | ATCGAT | 1 cut(s) | 1439 |
| CpoI | CGGWCCG | 1 cut(s) | 2404 |
| CseI | GACGC | 7 cut(s) | 788, 1017, 1078, 1493, 1518, 1850, 2811 |
| Csp6I | GTAC | 8 cut(s) | 45, 919, 1047, 1413, 1598, 1897, 2075, 2217 |
| CspAI | ACCGGT | 1 cut(s) | 2213 |
| CspI | CGGWCCG | 1 cut(s) | 2404 |
| CviQI | GTAC | 8 cut(s) | 45, 919, 1047, 1413, 1598, 1897, 2075, 2217 |
| DinI | GGCGCC | 2 cut(s) | 2109, 2803 |
| DpnI | GATC | 7 cut(s) | 1100, 1217, 1438, 1794, 1863, 2883, 2919 |
| DpnII | GATC | 7 cut(s) | 1098, 1215, 1436, 1792, 1861, 2881, 2917 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 277 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 277 |
| EaeI | YGGCCR | 3 cut(s) | 289, 2580, 2849 |
| EagI | CGGCCG | 2 cut(s) | 289, 2849 |
| Eam1104I | CTCTTC | 5 cut(s) | 510, 588, 666, 1734, 3090 |
| EarI | CTCTTC | 5 cut(s) | 510, 588, 666, 1734, 3090 |
| EciI | GGCGGA | 2 cut(s) | 347, 2396 |
| EclXI | CGGCCG | 2 cut(s) | 289, 2849 |
| Eco130I | CCWWGG | 3 cut(s) | 1238, 2583, 2925 |
| Eco147I | AGGCCT | 1 cut(s) | 2630 |
| Eco24I | GRGCYC | 2 cut(s) | 2305, 3035 |
| Eco31I | GGTCTC | 1 cut(s) | 1364 |
| Eco32I | GATATC | 1 cut(s) | 933 |
| Eco47I | GGWCC | 6 cut(s) | 376, 2127, 2404, 2946, 3015, 3052 |
| Eco52I | CGGCCG | 2 cut(s) | 289, 2849 |
| Eco57I | CTGAAG | 4 cut(s) | 1535, 2364, 2591, 2988 |
| Eco72I | CACGTG | 1 cut(s) | 821 |
| Eco81I | CCTNAGG | 2 cut(s) | 2132, 2502 |
| Eco88I | CYCGRG | 2 cut(s) | 1102, 2976 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2609 |
| EcoO109I | RGGNCCY | 3 cut(s) | 376, 2127, 2301 |
| EcoRII | CCWGG | 6 cut(s) | 252, 1373, 2286, 2481, 2884, 3066 |
| EcoRV | GATATC | 1 cut(s) | 933 |
| EcoT14I | CCWWGG | 3 cut(s) | 1238, 2583, 2925 |
| EcoT38I | GRGCYC | 2 cut(s) | 2305, 3035 |
| EgeI | GGCGCC | 2 cut(s) | 2109, 2803 |
| EheI | GGCGCC | 2 cut(s) | 2109, 2803 |
| ErhI | CCWWGG | 3 cut(s) | 1238, 2583, 2925 |
| Esp3I | CGTCTC | 2 cut(s) | 737, 2829 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 545, 577, 623, 655, 701, 733 |
| FaqI | GGGAC | 8 cut(s) | 29, 228, 389, 1560, 2113, 2413, 2959, 3028 |
| FauI | CCCGC | 6 cut(s) | 1464, 1537, 2119, 2167, 2514, 2754 |
| FbaI | TGATCA | 1 cut(s) | 2917 |
| FblI | GTMKAC | 3 cut(s) | 391, 2598, 2738 |
| FokI | GGATG | 8 cut(s) | 197, 1307, 1532, 2285, 2408, 2570, 2588, 2945 |
| FriOI | GRGCYC | 2 cut(s) | 2305, 3035 |
| FspBI | CTAG | 7 cut(s) | 146, 450, 533, 611, 689, 1086, 1347 |
| FspI | TGCGCA | 1 cut(s) | 2091 |
| GsaI | CCCAGC | 2 cut(s) | 1908, 2381 |
| GsuI | CTGGAG | 5 cut(s) | 275, 815, 1931, 2061, 2768 |
| HaeII | RGCGCY | 3 cut(s) | 2111, 2143, 2805 |
| HgaI | GACGC | 7 cut(s) | 788, 1017, 1078, 1493, 1518, 1850, 2811 |
| Hin1I | GRCGYC | 4 cut(s) | 780, 2108, 2802, 2822 |
| HincII | GTYRAC | 4 cut(s) | 31, 880, 1423, 2599 |
| HindII | GTYRAC | 4 cut(s) | 31, 880, 1423, 2599 |
| HinfI | GANTC | 8 cut(s) | 896, 980, 1115, 1388, 1498, 1777, 1811, 2615 |
| HpaI | GTTAAC | 1 cut(s) | 31 |
| HphI | GGTGA | 5 cut(s) | 730, 1507, 1630, 1963, 2827 |
| Hpy188III | TCNNGA | 9 cut(s) | 192, 299, 317, 794, 963, 1002, 1102, 1306, 3008 |
| Hpy99I | CGWCG | 6 cut(s) | 283, 297, 782, 1412, 1534, 3113 |
| HpyCH4III | ACNGT | 9 cut(s) | 108, 181, 274, 1209, 1340, 1412, 2015, 2261, 2404 |
| HpyCH4IV | ACGT | 5 cut(s) | 239, 278, 820, 1267, 1664 |
| HpySE526I | ACGT | 5 cut(s) | 239, 278, 820, 1267, 1664 |
| Hsp92I | GRCGYC | 4 cut(s) | 780, 2108, 2802, 2822 |
| KasI | GGCGCC | 2 cut(s) | 2107, 2801 |
| KflI | GGGWCCC | 1 cut(s) | 2127 |
| Kpn2I | TCCGGA | 2 cut(s) | 1001, 1305 |
| KroI | GCCGGC | 2 cut(s) | 67, 1553 |
| KroNI | GCCGGC | 2 cut(s) | 69, 1555 |
| Ksp22I | TGATCA | 1 cut(s) | 2917 |
| KspAI | GTTAAC | 1 cut(s) | 31 |
| Kzo9I | GATC | 7 cut(s) | 1098, 1215, 1436, 1792, 1861, 2881, 2917 |
| LmnI | GCTCC | 5 cut(s) | 1972, 2042, 2067, 2137, 2182 |
| LweI | GCATC | 8 cut(s) | 40, 175, 423, 1031, 1285, 1668, 2521, 2548 |
| MaeI | CTAG | 7 cut(s) | 146, 450, 533, 611, 689, 1086, 1347 |
| MaeII | ACGT | 5 cut(s) | 239, 278, 820, 1267, 1664 |
| MaeIII | GTNAC | 5 cut(s) | 274, 767, 1334, 1585, 1838 |
| MalI | GATC | 7 cut(s) | 1100, 1217, 1438, 1794, 1863, 2883, 2919 |
| MbiI | CCGCTC | 1 cut(s) | 1684 |
| MboI | GATC | 7 cut(s) | 1098, 1215, 1436, 1792, 1861, 2881, 2917 |
| MflI | RGATCY | 1 cut(s) | 1098 |
| MhlI | GDGCHC | 4 cut(s) | 2305, 2842, 3000, 3035 |
| MluCI | AATT | 8 cut(s) | 8, 151, 162, 1053, 1614, 1871, 2328, 2351 |
| Mly113I | GGCGCC | 2 cut(s) | 2108, 2802 |
| MlyI | GAGTC | 1 cut(s) | 1397 |
| MmeI | TCCRAC | 2 cut(s) | 2160, 2628 |
| MroI | TCCGGA | 2 cut(s) | 1001, 1305 |
| MroNI | GCCGGC | 2 cut(s) | 67, 1553 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2538 |
| MseI | TTAA | 9 cut(s) | 6, 30, 90, 138, 744, 873, 909, 1782, 2715 |
| MslI | CAYNNNNRTG | 1 cut(s) | 823 |
| MspA1I | CMGCKG | 8 cut(s) | 854, 1358, 1513, 1544, 1904, 2702, 2944, 3082 |
| Mva1269I | GAATGC | 3 cut(s) | 2444, 2677, 2872 |
| MvaI | CCWGG | 6 cut(s) | 254, 1375, 2288, 2483, 2886, 3068 |
| MvnI | CGCG | 4 cut(s) | 283, 1407, 1578, 2052 |
| NaeI | GCCGGC | 2 cut(s) | 69, 1555 |
| NarI | GGCGCC | 2 cut(s) | 2108, 2802 |
| NciI | CCSGG | 9 cut(s) | 1120, 1488, 1595, 1821, 2144, 2544, 2951, 2977, 2978 |
| NdeII | GATC | 7 cut(s) | 1098, 1215, 1436, 1792, 1861, 2881, 2917 |
| NgoMIV | GCCGGC | 2 cut(s) | 67, 1553 |
| NheI | GCTAGC | 3 cut(s) | 449, 1085, 1346 |
| NmeAIII | GCCGAG | 1 cut(s) | 2420 |
| NmuCI | GTSAC | 2 cut(s) | 1585, 1838 |
| NsbI | TGCGCA | 1 cut(s) | 2091 |
| NspI | RCATGY | 4 cut(s) | 1132, 1553, 1561, 1897 |
| PaeI | GCATGC | 1 cut(s) | 1561 |
| PaeR7I | CTCGAG | 1 cut(s) | 1102 |
| PceI | AGGCCT | 1 cut(s) | 2630 |
| PciI | ACATGT | 1 cut(s) | 1128 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 817, 941, 1264, 2019 |
| PctI | GAATGC | 3 cut(s) | 2444, 2677, 2872 |
| PdiI | GCCGGC | 2 cut(s) | 69, 1555 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2538 |
| PfeI | GAWTC | 7 cut(s) | 896, 980, 1115, 1498, 1777, 1811, 2615 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 1239, 1618, 1945, 2811 |
| PfoI | TCCNGGA | 1 cut(s) | 252 |
| PinAI | ACCGGT | 1 cut(s) | 2213 |
| PleI | GAGTC | 1 cut(s) | 1396 |
| PluTI | GGCGCC | 2 cut(s) | 2111, 2805 |
| PmaCI | CACGTG | 1 cut(s) | 821 |
| PmlI | CACGTG | 1 cut(s) | 821 |
| PpsI | GAGTC | 1 cut(s) | 1396 |
| Ppu21I | YACGTR | 2 cut(s) | 821, 1665 |
| PpuMI | RGGWCCY | 2 cut(s) | 376, 2127 |
| PscI | ACATGT | 1 cut(s) | 1128 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1034, 2125 |
| PshBI | ATTAAT | 1 cut(s) | 744 |
| Psp5II | RGGWCCY | 2 cut(s) | 376, 2127 |
| Psp6I | CCWGG | 6 cut(s) | 252, 1373, 2286, 2481, 2884, 3066 |
| PspCI | CACGTG | 1 cut(s) | 821 |
| PspFI | CCCAGC | 2 cut(s) | 1904, 2377 |
| PspGI | CCWGG | 6 cut(s) | 252, 1373, 2286, 2481, 2884, 3066 |
| PspOMI | GGGCCC | 1 cut(s) | 2301 |
| PspPPI | RGGWCCY | 2 cut(s) | 376, 2127 |
| PstNI | CAGNNNCTG | 2 cut(s) | 474, 2702 |
| PsuI | RGATCY | 1 cut(s) | 1098 |
| PvuII | CAGCTG | 2 cut(s) | 1358, 3082 |
| RsaI | GTAC | 8 cut(s) | 46, 920, 1048, 1414, 1599, 1898, 2076, 2218 |
| RsaNI | GTAC | 8 cut(s) | 45, 919, 1047, 1413, 1598, 1897, 2075, 2217 |
| RseI | CAYNNNNRTG | 1 cut(s) | 823 |
| Rsr2I | CGGWCCG | 1 cut(s) | 2404 |
| RsrII | CGGWCCG | 1 cut(s) | 2404 |
| SalI | GTCGAC | 1 cut(s) | 2597 |
| SaqAI | TTAA | 9 cut(s) | 6, 30, 90, 138, 744, 873, 909, 1782, 2715 |
| Sau3AI | GATC | 7 cut(s) | 1098, 1215, 1436, 1792, 1861, 2881, 2917 |
| SchI | GAGTC | 1 cut(s) | 1397 |
| SduI | GDGCHC | 4 cut(s) | 2305, 2842, 3000, 3035 |
| SfaNI | GCATC | 8 cut(s) | 40, 175, 423, 1031, 1285, 1668, 2521, 2548 |
| SfcI | CTRYAG | 2 cut(s) | 2220, 2703 |
| SfoI | GGCGCC | 2 cut(s) | 2109, 2803 |
| Sfr274I | CTCGAG | 1 cut(s) | 1102 |
| SinI | GGWCC | 6 cut(s) | 376, 2127, 2404, 2946, 3015, 3052 |
| SlaI | CTCGAG | 1 cut(s) | 1102 |
| SmaI | CCCGGG | 1 cut(s) | 2978 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 823 |
| SmlI | CTYRAG | 3 cut(s) | 1040, 1102, 2197 |
| SmoI | CTYRAG | 3 cut(s) | 1040, 1102, 2197 |
| SphI | GCATGC | 1 cut(s) | 1561 |
| Sse9I | AATT | 8 cut(s) | 8, 151, 162, 1053, 1614, 1871, 2328, 2351 |
| SseBI | AGGCCT | 1 cut(s) | 2630 |
| SspDI | GGCGCC | 2 cut(s) | 2107, 2801 |
| SspMI | CTAG | 7 cut(s) | 146, 450, 533, 611, 689, 1086, 1347 |
| StuI | AGGCCT | 1 cut(s) | 2630 |
| StyI | CCWWGG | 3 cut(s) | 1238, 2583, 2925 |
| TaaI | ACNGT | 9 cut(s) | 108, 181, 274, 1209, 1340, 1412, 2015, 2261, 2404 |
| TaiI | ACGT | 5 cut(s) | 242, 281, 823, 1270, 1667 |
| TaqII | GACCGA | 1 cut(s) | 2438 |
| TasI | AATT | 8 cut(s) | 8, 151, 162, 1053, 1614, 1871, 2328, 2351 |
| TatI | WGTACW | 3 cut(s) | 44, 918, 1896 |
| TfiI | GAWTC | 7 cut(s) | 896, 980, 1115, 1498, 1777, 1811, 2615 |
| Tru1I | TTAA | 9 cut(s) | 6, 30, 90, 138, 744, 873, 909, 1782, 2715 |
| Tru9I | TTAA | 9 cut(s) | 6, 30, 90, 138, 744, 873, 909, 1782, 2715 |
| TscAI | CASTG | 6 cut(s) | 186, 402, 1950, 2266, 2884, 3043 |
| TseFI | GTSAC | 2 cut(s) | 1585, 1838 |
| Tsp45I | GTSAC | 2 cut(s) | 1585, 1838 |
| TspDTI | ATGAA | 6 cut(s) | 528, 606, 684, 1001, 1048, 1918 |
| TspGWI | ACGGA | 1 cut(s) | 1787 |
| TspMI | CCCGGG | 1 cut(s) | 2976 |
| TspRI | CASTG | 6 cut(s) | 186, 402, 1950, 2266, 2884, 3043 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 1239, 1618, 1945, 2811 |
| VneI | GTGCAC | 1 cut(s) | 2996 |
| VpaK11BI | GGWCC | 6 cut(s) | 376, 2127, 2404, 2946, 3015, 3052 |
| VspI | ATTAAT | 1 cut(s) | 744 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2609 |
| XapI | RAATTY | 4 cut(s) | 151, 1614, 2328, 2351 |
| XceI | RCATGY | 4 cut(s) | 1132, 1553, 1561, 1897 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 2000, 2294, 2989 |
| XhoI | CTCGAG | 1 cut(s) | 1102 |
| XmaI | CCCGGG | 1 cut(s) | 2976 |
| XmiI | GTMKAC | 3 cut(s) | 391, 2598, 2738 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2538 |
| XspI | CTAG | 7 cut(s) | 146, 450, 533, 611, 689, 1086, 1347 |