No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 4 cut(s) | 366, 402, 507, 705 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 412 |
| AccBSI | CCGCTC | 3 cut(s) | 110, 532, 676 |
| AccII | CGCG | 1 cut(s) | 289 |
| AcoI | YGGCCR | 3 cut(s) | 178, 295, 605 |
| AcyI | GRCGYC | 1 cut(s) | 582 |
| AfaI | GTAC | 3 cut(s) | 315, 333, 473 |
| AfeI | AGCGCT | 1 cut(s) | 275 |
| AflIII | ACRYGT | 1 cut(s) | 154 |
| AgsI | TTSAA | 3 cut(s) | 201, 210, 504 |
| AjnI | CCWGG | 3 cut(s) | 19, 491, 598 |
| AluBI | AGCT | 1 cut(s) | 92 |
| AluI | AGCT | 1 cut(s) | 92 |
| Ama87I | CYCGRG | 2 cut(s) | 613, 652 |
| Aor51HI | AGCGCT | 1 cut(s) | 275 |
| AoxI | GGCC | 6 cut(s) | 16, 178, 232, 295, 361, 605 |
| ApeKI | GCWGC | 7 cut(s) | 164, 222, 291, 300, 354, 389, 392 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 205 |
| AspLEI | GCGC | 2 cut(s) | 276, 291 |
| AspS9I | GGNCC | 1 cut(s) | 17 |
| AsuC2I | CCSGG | 2 cut(s) | 614, 615 |
| AsuHPI | GGTGA | 1 cut(s) | 267 |
| AsuNHI | GCTAGC | 2 cut(s) | 92, 689 |
| AvaI | CYCGRG | 2 cut(s) | 613, 652 |
| BalI | TGGCCA | 1 cut(s) | 607 |
| BanI | GGYRCC | 4 cut(s) | 366, 402, 507, 705 |
| BanII | GRGCYC | 1 cut(s) | 639 |
| BauI | CACGAG | 1 cut(s) | 82 |
| BbvCI | CCTCAGC | 1 cut(s) | 277 |
| BbvI | GCAGC | 7 cut(s) | 151, 209, 278, 287, 366, 376, 404 |
| BccI | CCATC | 2 cut(s) | 414, 615 |
| BceAI | ACGGC | 2 cut(s) | 81, 261 |
| BciT130I | CCWGG | 3 cut(s) | 21, 493, 600 |
| BcnI | CCSGG | 2 cut(s) | 614, 615 |
| BfaI | CTAG | 2 cut(s) | 93, 690 |
| BfmI | CTRYAG | 1 cut(s) | 390 |
| BfoI | RGCGCY | 1 cut(s) | 277 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 231 |
| Bme1390I | CCNGG | 5 cut(s) | 21, 493, 600, 614, 615 |
| BmeT110I | CYCGRG | 2 cut(s) | 613, 652 |
| BmgT120I | GGNCC | 1 cut(s) | 17 |
| BmiI | GGNNCC | 7 cut(s) | 285, 368, 404, 509, 597, 707, 722 |
| BmrFI | CCNGG | 5 cut(s) | 21, 493, 600, 614, 615 |
| BmrI | ACTGGG | 2 cut(s) | 422, 566 |
| BmsI | GCATC | 3 cut(s) | 59, 418, 432 |
| BmtI | GCTAGC | 2 cut(s) | 96, 693 |
| BmuI | ACTGGG | 2 cut(s) | 422, 566 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 537, 569 |
| BpmI | CTGGAG | 1 cut(s) | 270 |
| Bpu10I | CCTNAGC | 2 cut(s) | 270, 277 |
| BpuMI | CCSGG | 2 cut(s) | 614, 615 |
| Bsa29I | ATCGAT | 1 cut(s) | 426 |
| BsaHI | GRCGYC | 1 cut(s) | 582 |
| BsaJI | CCNNGG | 8 cut(s) | 19, 184, 235, 304, 370, 491, 613, 653 |
| Bse118I | RCCGGY | 2 cut(s) | 363, 431 |
| Bse1I | ACTGG | 4 cut(s) | 417, 444, 572, 697 |
| Bse3DI | GCAATG | 1 cut(s) | 349 |
| BseBI | CCWGG | 3 cut(s) | 21, 493, 600 |
| BseCI | ATCGAT | 1 cut(s) | 426 |
| BseDI | CCNNGG | 8 cut(s) | 19, 184, 235, 304, 370, 491, 613, 653 |
| BseGI | GGATG | 1 cut(s) | 626 |
| BseMI | GCAATG | 1 cut(s) | 349 |
| BseMII | CTCAG | 2 cut(s) | 261, 268 |
| BseNI | ACTGG | 4 cut(s) | 417, 444, 572, 697 |
| BseX3I | CGGCCG | 2 cut(s) | 178, 295 |
| BseXI | GCAGC | 7 cut(s) | 151, 209, 278, 287, 366, 376, 404 |
| BseYI | CCCAGC | 3 cut(s) | 556, 591, 639 |
| Bsh1236I | CGCG | 1 cut(s) | 289 |
| Bsh1285I | CGRYCG | 3 cut(s) | 181, 298, 436 |
| BshFI | GGCC | 6 cut(s) | 18, 180, 234, 297, 363, 607 |
| BshNI | GGYRCC | 4 cut(s) | 366, 402, 507, 705 |
| BshVI | ATCGAT | 1 cut(s) | 426 |
| BsiEI | CGRYCG | 3 cut(s) | 181, 298, 436 |
| BsiHKCI | CYCGRG | 2 cut(s) | 613, 652 |
| BsiSI | CCGG | 4 cut(s) | 364, 432, 543, 614 |
| BslFI | GGGAC | 3 cut(s) | 18, 126, 569 |
| BsmFI | GGGAC | 3 cut(s) | 18, 126, 569 |
| BsnI | GGCC | 6 cut(s) | 18, 180, 234, 297, 363, 607 |
| BsoBI | CYCGRG | 2 cut(s) | 613, 652 |
| Bsp1286I | GDGCHC | 1 cut(s) | 639 |
| Bsp19I | CCATGG | 2 cut(s) | 184, 370 |
| BspANI | GGCC | 6 cut(s) | 18, 180, 234, 297, 363, 607 |
| BspCNI | CTCAG | 2 cut(s) | 262, 269 |
| BspDI | ATCGAT | 1 cut(s) | 426 |
| BspFNI | CGCG | 1 cut(s) | 289 |
| BspLI | GGNNCC | 7 cut(s) | 285, 368, 404, 509, 597, 707, 722 |
| BspMAI | CTGCAG | 1 cut(s) | 394 |
| BspOI | GCTAGC | 2 cut(s) | 96, 693 |
| BspT107I | GGYRCC | 4 cut(s) | 366, 402, 507, 705 |
| BsrBI | CCGCTC | 3 cut(s) | 110, 532, 676 |
| BsrDI | GCAATG | 1 cut(s) | 349 |
| BsrFI | RCCGGY | 2 cut(s) | 363, 431 |
| BsrI | ACTGG | 4 cut(s) | 417, 444, 572, 697 |
| BssAI | RCCGGY | 2 cut(s) | 363, 431 |
| BssECI | CCNNGG | 8 cut(s) | 19, 184, 235, 304, 370, 491, 613, 653 |
| BssNI | GRCGYC | 1 cut(s) | 582 |
| BssSI | CACGAG | 1 cut(s) | 82 |
| BssT1I | CCWWGG | 3 cut(s) | 184, 304, 370 |
| Bst2BI | CACGAG | 1 cut(s) | 82 |
| Bst2UI | CCWGG | 3 cut(s) | 21, 493, 600 |
| Bst4CI | ACNGT | 2 cut(s) | 66, 133 |
| BstACI | GRCGYC | 1 cut(s) | 582 |
| BstC8I | GCNNGC | 6 cut(s) | 90, 94, 266, 512, 605, 691 |
| BstDEI | CTNAG | 2 cut(s) | 270, 277 |
| BstDSI | CCRYGG | 2 cut(s) | 184, 370 |
| BstF5I | GGATG | 1 cut(s) | 626 |
| BstFNI | CGCG | 1 cut(s) | 289 |
| BstH2I | RGCGCY | 1 cut(s) | 277 |
| BstHHI | GCGC | 2 cut(s) | 276, 291 |
| BstMCI | CGRYCG | 3 cut(s) | 181, 298, 436 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 78, 231, 297, 300, 360, 437, 588, 729 |
| BstNI | CCWGG | 3 cut(s) | 21, 493, 600 |
| BstNSI | RCATGY | 1 cut(s) | 158 |
| BstSCI | CCNGG | 5 cut(s) | 19, 491, 598, 612, 613 |
| BstSFI | CTRYAG | 1 cut(s) | 390 |
| BstUI | CGCG | 1 cut(s) | 289 |
| BstV1I | GCAGC | 7 cut(s) | 151, 209, 278, 287, 366, 376, 404 |
| BstZI | CGGCCG | 2 cut(s) | 178, 295 |
| Bsu15I | ATCGAT | 1 cut(s) | 426 |
| BsuRI | GGCC | 6 cut(s) | 18, 180, 234, 297, 363, 607 |
| BsuTUI | ATCGAT | 1 cut(s) | 426 |
| BtgI | CCRYGG | 2 cut(s) | 184, 370 |
| BtsCI | GGATG | 1 cut(s) | 626 |
| BtsI | GCAGTG | 1 cut(s) | 484 |
| BtsIMutI | CAGTG | 3 cut(s) | 451, 484, 704 |
| Cac8I | GCNNGC | 6 cut(s) | 90, 94, 266, 512, 605, 691 |
| CciNI | GCGGCCGC | 2 cut(s) | 178, 295 |
| CfoI | GCGC | 2 cut(s) | 276, 291 |
| Cfr10I | RCCGGY | 2 cut(s) | 363, 431 |
| Cfr13I | GGNCC | 1 cut(s) | 17 |
| Cfr9I | CCCGGG | 1 cut(s) | 613 |
| ClaI | ATCGAT | 1 cut(s) | 426 |
| CseI | GACGC | 3 cut(s) | 55, 87, 571 |
| Csp6I | GTAC | 3 cut(s) | 314, 332, 472 |
| CviAII | CATG | 4 cut(s) | 155, 161, 185, 371 |
| CviQI | GTAC | 3 cut(s) | 314, 332, 472 |
| DdeI | CTNAG | 2 cut(s) | 270, 277 |
| EaeI | YGGCCR | 3 cut(s) | 178, 295, 605 |
| EagI | CGGCCG | 2 cut(s) | 178, 295 |
| EciI | GGCGGA | 3 cut(s) | 342, 550, 633 |
| EclXI | CGGCCG | 2 cut(s) | 178, 295 |
| Eco130I | CCWWGG | 3 cut(s) | 184, 304, 370 |
| Eco24I | GRGCYC | 1 cut(s) | 639 |
| Eco47III | AGCGCT | 1 cut(s) | 275 |
| Eco52I | CGGCCG | 2 cut(s) | 178, 295 |
| Eco88I | CYCGRG | 2 cut(s) | 613, 652 |
| EcoRII | CCWGG | 3 cut(s) | 19, 491, 598 |
| EcoT14I | CCWWGG | 3 cut(s) | 184, 304, 370 |
| EcoT38I | GRGCYC | 1 cut(s) | 639 |
| ErhI | CCWWGG | 3 cut(s) | 184, 304, 370 |
| FaeI | CATG | 4 cut(s) | 158, 164, 188, 374 |
| FaiI | YATR | 4 cut(s) | 156, 162, 186, 372 |
| FaqI | GGGAC | 3 cut(s) | 18, 126, 569 |
| FatI | CATG | 4 cut(s) | 154, 160, 184, 370 |
| FauI | CCCGC | 3 cut(s) | 103, 160, 737 |
| FokI | GGATG | 1 cut(s) | 633 |
| FriOI | GRGCYC | 1 cut(s) | 639 |
| FspBI | CTAG | 2 cut(s) | 93, 690 |
| GlaI | GCGC | 2 cut(s) | 275, 290 |
| GsaI | CCCAGC | 3 cut(s) | 560, 595, 643 |
| GsuI | CTGGAG | 1 cut(s) | 270 |
| HaeII | RGCGCY | 1 cut(s) | 277 |
| HaeIII | GGCC | 6 cut(s) | 18, 180, 234, 297, 363, 607 |
| HapII | CCGG | 4 cut(s) | 364, 432, 543, 614 |
| HgaI | GACGC | 3 cut(s) | 55, 87, 571 |
| HhaI | GCGC | 2 cut(s) | 276, 291 |
| Hin1I | GRCGYC | 1 cut(s) | 582 |
| Hin1II | CATG | 4 cut(s) | 158, 164, 188, 374 |
| Hin6I | GCGC | 2 cut(s) | 274, 289 |
| HinP1I | GCGC | 2 cut(s) | 274, 289 |
| HinfI | GANTC | 4 cut(s) | 216, 309, 552, 563 |
| HpaII | CCGG | 4 cut(s) | 364, 432, 543, 614 |
| HphI | GGTGA | 1 cut(s) | 267 |
| Hpy188I | TCNGA | 1 cut(s) | 578 |
| Hpy99I | CGWCG | 1 cut(s) | 49 |
| HpyAV | CCTTC | 6 cut(s) | 216, 353, 392, 413, 498, 705 |
| HpyCH4III | ACNGT | 2 cut(s) | 66, 133 |
| HpyCH4V | TGCA | 2 cut(s) | 392, 661 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 78, 231, 297, 300, 360, 437, 588, 729 |
| HpyF3I | CTNAG | 2 cut(s) | 270, 277 |
| Hsp92I | GRCGYC | 1 cut(s) | 582 |
| Hsp92II | CATG | 4 cut(s) | 158, 164, 188, 374 |
| HspAI | GCGC | 2 cut(s) | 274, 289 |
| LmnI | GCTCC | 4 cut(s) | 119, 146, 283, 720 |
| Lsp1109I | GCAGC | 7 cut(s) | 151, 209, 278, 287, 366, 376, 404 |
| LweI | GCATC | 3 cut(s) | 59, 418, 432 |
| MaeI | CTAG | 2 cut(s) | 93, 690 |
| MbiI | CCGCTC | 3 cut(s) | 110, 532, 676 |
| MboII | GAAGA | 1 cut(s) | 461 |
| MhlI | GDGCHC | 1 cut(s) | 639 |
| MlsI | TGGCCA | 1 cut(s) | 607 |
| MluCI | AATT | 1 cut(s) | 259 |
| MluNI | TGGCCA | 1 cut(s) | 607 |
| MlyI | GAGTC | 4 cut(s) | 225, 318, 546, 557 |
| MmeI | TCCRAC | 2 cut(s) | 124, 556 |
| MnlI | CCTC | 8 cut(s) | 8, 230, 245, 272, 539, 572, 648, 696 |
| Mox20I | TGGCCA | 1 cut(s) | 607 |
| MroXI | GAANNNNTTC | 1 cut(s) | 205 |
| MscI | TGGCCA | 1 cut(s) | 607 |
| MslI | CAYNNNNRTG | 1 cut(s) | 159 |
| Msp20I | TGGCCA | 1 cut(s) | 607 |
| MspA1I | CMGCKG | 3 cut(s) | 300, 461, 560 |
| MspI | CCGG | 4 cut(s) | 364, 432, 543, 614 |
| MspR9I | CCNGG | 5 cut(s) | 21, 493, 600, 614, 615 |
| MvaI | CCWGG | 3 cut(s) | 21, 493, 600 |
| MvnI | CGCG | 1 cut(s) | 289 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 78, 231, 297, 300, 360, 437, 588, 729 |
| NciI | CCSGG | 2 cut(s) | 614, 615 |
| NcoI | CCATGG | 2 cut(s) | 184, 370 |
| NheI | GCTAGC | 2 cut(s) | 92, 689 |
| NlaIII | CATG | 4 cut(s) | 158, 164, 188, 374 |
| NlaIV | GGNNCC | 7 cut(s) | 285, 368, 404, 509, 597, 707, 722 |
| NmeAIII | GCCGAG | 1 cut(s) | 260 |
| NotI | GCGGCCGC | 2 cut(s) | 178, 295 |
| NspI | RCATGY | 1 cut(s) | 158 |
| PciI | ACATGT | 1 cut(s) | 154 |
| PdmI | GAANNNNTTC | 1 cut(s) | 205 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 412 |
| PleI | GAGTC | 4 cut(s) | 224, 317, 546, 557 |
| PpsI | GAGTC | 4 cut(s) | 224, 317, 546, 557 |
| PscI | ACATGT | 1 cut(s) | 154 |
| Psp6I | CCWGG | 3 cut(s) | 19, 491, 598 |
| PspFI | CCCAGC | 3 cut(s) | 556, 591, 639 |
| PspGI | CCWGG | 3 cut(s) | 19, 491, 598 |
| PspN4I | GGNNCC | 7 cut(s) | 285, 368, 404, 509, 597, 707, 722 |
| PspPI | GGNCC | 1 cut(s) | 17 |
| PstI | CTGCAG | 1 cut(s) | 394 |
| RsaI | GTAC | 3 cut(s) | 315, 333, 473 |
| RsaNI | GTAC | 3 cut(s) | 314, 332, 472 |
| RseI | CAYNNNNRTG | 1 cut(s) | 159 |
| Sau96I | GGNCC | 1 cut(s) | 17 |
| SchI | GAGTC | 4 cut(s) | 225, 318, 546, 557 |
| ScrFI | CCNGG | 5 cut(s) | 21, 493, 600, 614, 615 |
| SduI | GDGCHC | 1 cut(s) | 639 |
| SetI | ASST | 7 cut(s) | 30, 94, 241, 502, 509, 707, 716 |
| SfaNI | GCATC | 3 cut(s) | 59, 418, 432 |
| SfcI | CTRYAG | 1 cut(s) | 390 |
| SmaI | CCCGGG | 1 cut(s) | 615 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 159 |
| Sse9I | AATT | 1 cut(s) | 259 |
| SspMI | CTAG | 2 cut(s) | 93, 690 |
| StyD4I | CCNGG | 5 cut(s) | 19, 491, 598, 612, 613 |
| StyI | CCWWGG | 3 cut(s) | 184, 304, 370 |
| TaaI | ACNGT | 2 cut(s) | 66, 133 |
| TaqI | TCGA | 3 cut(s) | 40, 409, 426 |
| TaqII | GACCGA | 1 cut(s) | 363 |
| TasI | AATT | 1 cut(s) | 259 |
| TatI | WGTACW | 1 cut(s) | 331 |
| TscAI | CASTG | 3 cut(s) | 451, 491, 704 |
| TseI | GCWGC | 7 cut(s) | 164, 222, 291, 300, 354, 389, 392 |
| TspMI | CCCGGG | 1 cut(s) | 613 |
| TspRI | CASTG | 3 cut(s) | 451, 491, 704 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 412 |
| XceI | RCATGY | 1 cut(s) | 158 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 377 |
| XmaI | CCCGGG | 1 cut(s) | 613 |
| XmnI | GAANNNNTTC | 1 cut(s) | 205 |
| XspI | CTAG | 2 cut(s) | 93, 690 |