No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 440 |
| Acc36I | ACCTGC | 1 cut(s) | 384 |
| Acc65I | GGTACC | 1 cut(s) | 519 |
| AccB1I | GGYRCC | 2 cut(s) | 303, 519 |
| AccBSI | CCGCTC | 1 cut(s) | 74 |
| AccII | CGCG | 2 cut(s) | 34, 579 |
| AcoI | YGGCCR | 2 cut(s) | 133, 196 |
| AcuI | CTGAAG | 1 cut(s) | 199 |
| AcvI | CACGTG | 1 cut(s) | 483 |
| AcyI | GRCGYC | 2 cut(s) | 304, 324 |
| AfaI | GTAC | 3 cut(s) | 188, 398, 521 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 10, 393, 438, 473 |
| AflIII | ACRYGT | 3 cut(s) | 32, 286, 482 |
| AgsI | TTSAA | 4 cut(s) | 210, 218, 293, 594 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 535 |
| AjiI | CACGTC | 1 cut(s) | 338 |
| AluBI | AGCT | 4 cut(s) | 81, 177, 390, 546 |
| AluI | AGCT | 4 cut(s) | 81, 177, 390, 546 |
| Alw26I | GTCTC | 3 cut(s) | 41, 360, 522 |
| Ama87I | CYCGRG | 4 cut(s) | 271, 404, 508, 547 |
| AoxI | GGCC | 5 cut(s) | 133, 196, 268, 274, 422 |
| ApaI | GGGCCC | 1 cut(s) | 272 |
| ApeKI | GCWGC | 7 cut(s) | 65, 81, 110, 192, 390, 409, 597 |
| Asp718I | GGTACC | 1 cut(s) | 519 |
| AspLEI | GCGC | 2 cut(s) | 306, 581 |
| AspS9I | GGNCC | 6 cut(s) | 268, 269, 274, 423, 442, 553 |
| AsuC2I | CCSGG | 4 cut(s) | 272, 273, 509, 510 |
| AsuHPI | GGTGA | 1 cut(s) | 168 |
| AvaI | CYCGRG | 4 cut(s) | 271, 404, 508, 547 |
| AvaII | GGWCC | 2 cut(s) | 442, 553 |
| BaeGI | GKGCMC | 1 cut(s) | 272 |
| BanI | GGYRCC | 2 cut(s) | 303, 519 |
| BanII | GRGCYC | 1 cut(s) | 272 |
| BbrPI | CACGTG | 1 cut(s) | 483 |
| BbsI | GAAGAC | 1 cut(s) | 246 |
| BbvI | GCAGC | 7 cut(s) | 52, 68, 122, 179, 377, 421, 609 |
| BccI | CCATC | 4 cut(s) | 12, 125, 476, 510 |
| BceAI | ACGGC | 1 cut(s) | 360 |
| BcnI | CCSGG | 4 cut(s) | 272, 273, 509, 510 |
| BcoDI | GTCTC | 3 cut(s) | 41, 360, 522 |
| BfmI | CTRYAG | 2 cut(s) | 66, 391 |
| BfoI | RGCGCY | 1 cut(s) | 307 |
| BfuAI | ACCTGC | 1 cut(s) | 384 |
| Bme1390I | CCNGG | 4 cut(s) | 272, 273, 509, 510 |
| Bme18I | GGWCC | 2 cut(s) | 442, 553 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 535 |
| BmeT110I | CYCGRG | 4 cut(s) | 271, 404, 508, 547 |
| BmgBI | CACGTC | 1 cut(s) | 338 |
| BmgT120I | GGNCC | 6 cut(s) | 268, 269, 274, 423, 442, 553 |
| BmiI | GGNNCC | 7 cut(s) | 269, 270, 305, 443, 444, 521, 554 |
| BmrFI | CCNGG | 4 cut(s) | 272, 273, 509, 510 |
| BmrI | ACTGGG | 1 cut(s) | 529 |
| BmuI | ACTGGG | 1 cut(s) | 529 |
| BpiI | GAAGAC | 1 cut(s) | 246 |
| BpmI | CTGGAG | 1 cut(s) | 516 |
| BpuMI | CCSGG | 4 cut(s) | 272, 273, 509, 510 |
| BsaAI | YACGTR | 1 cut(s) | 483 |
| BsaHI | GRCGYC | 2 cut(s) | 304, 324 |
| BsaI | GGTCTC | 1 cut(s) | 522 |
| BsaJI | CCNNGG | 2 cut(s) | 271, 508 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 10, 393, 438, 473 |
| Bse118I | RCCGGY | 1 cut(s) | 344 |
| Bse1I | ACTGG | 1 cut(s) | 535 |
| BseDI | CCNNGG | 2 cut(s) | 271, 508 |
| BseGI | GGATG | 1 cut(s) | 428 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 10, 393, 438, 473 |
| BseMII | CTCAG | 2 cut(s) | 162, 340 |
| BseNI | ACTGG | 1 cut(s) | 535 |
| BseSI | GKGCMC | 1 cut(s) | 272 |
| BseX3I | CGGCCG | 1 cut(s) | 196 |
| BseXI | GCAGC | 7 cut(s) | 52, 68, 122, 179, 377, 421, 609 |
| BseYI | CCCAGC | 5 cut(s) | 149, 264, 386, 445, 457 |
| BsgI | GTGCAG | 1 cut(s) | 129 |
| Bsh1236I | CGCG | 2 cut(s) | 34, 579 |
| Bsh1285I | CGRYCG | 3 cut(s) | 199, 573, 577 |
| BshFI | GGCC | 6 cut(s) | 3, 135, 198, 270, 276, 424 |
| BshNI | GGYRCC | 2 cut(s) | 303, 519 |
| BsiEI | CGRYCG | 3 cut(s) | 199, 573, 577 |
| BsiHKCI | CYCGRG | 4 cut(s) | 271, 404, 508, 547 |
| BsiSI | CCGG | 4 cut(s) | 272, 345, 363, 509 |
| BslFI | GGGAC | 3 cut(s) | 27, 342, 428 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 10, 393, 438, 473 |
| BsmAI | GTCTC | 3 cut(s) | 41, 360, 522 |
| BsmBI | CGTCTC | 1 cut(s) | 41 |
| BsmFI | GGGAC | 3 cut(s) | 27, 342, 428 |
| BsnI | GGCC | 6 cut(s) | 3, 135, 198, 270, 276, 424 |
| Bso31I | GGTCTC | 1 cut(s) | 522 |
| BsoBI | CYCGRG | 4 cut(s) | 271, 404, 508, 547 |
| Bsp120I | GGGCCC | 1 cut(s) | 268 |
| Bsp1286I | GDGCHC | 1 cut(s) | 272 |
| Bsp143I | GATC | 3 cut(s) | 55, 557, 570 |
| BspANI | GGCC | 6 cut(s) | 3, 135, 198, 270, 276, 424 |
| BspCNI | CTCAG | 2 cut(s) | 163, 341 |
| BspFNI | CGCG | 2 cut(s) | 34, 579 |
| BspLI | GGNNCC | 7 cut(s) | 269, 270, 305, 443, 444, 521, 554 |
| BspMAI | CTGCAG | 2 cut(s) | 70, 395 |
| BspMI | ACCTGC | 1 cut(s) | 384 |
| BspT107I | GGYRCC | 2 cut(s) | 303, 519 |
| BspTNI | GGTCTC | 1 cut(s) | 522 |
| BsrBI | CCGCTC | 1 cut(s) | 74 |
| BsrFI | RCCGGY | 1 cut(s) | 344 |
| BsrI | ACTGG | 1 cut(s) | 535 |
| BssAI | RCCGGY | 1 cut(s) | 344 |
| BssECI | CCNNGG | 2 cut(s) | 271, 508 |
| BssMI | GATC | 3 cut(s) | 55, 557, 570 |
| BssNI | GRCGYC | 2 cut(s) | 304, 324 |
| BstACI | GRCGYC | 2 cut(s) | 304, 324 |
| BstBAI | YACGTR | 1 cut(s) | 483 |
| BstC8I | GCNNGC | 3 cut(s) | 346, 382, 566 |
| BstDEI | CTNAG | 2 cut(s) | 171, 349 |
| BstEII | GGTNACC | 1 cut(s) | 161 |
| BstF5I | GGATG | 1 cut(s) | 428 |
| BstFNI | CGCG | 2 cut(s) | 34, 579 |
| BstH2I | RGCGCY | 1 cut(s) | 307 |
| BstHHI | GCGC | 2 cut(s) | 306, 581 |
| BstKTI | GATC | 3 cut(s) | 58, 560, 573 |
| BstMAI | GTCTC | 3 cut(s) | 41, 360, 522 |
| BstMBI | GATC | 3 cut(s) | 55, 557, 570 |
| BstMCI | CGRYCG | 3 cut(s) | 199, 573, 577 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 71, 198, 201, 210, 261, 338, 381, 390 |
| BstNSI | RCATGY | 2 cut(s) | 290, 591 |
| BstPI | GGTNACC | 1 cut(s) | 161 |
| BstSCI | CCNGG | 4 cut(s) | 270, 271, 507, 508 |
| BstSFI | CTRYAG | 2 cut(s) | 66, 391 |
| BstSLI | GKGCMC | 1 cut(s) | 272 |
| BstUI | CGCG | 2 cut(s) | 34, 579 |
| BstV1I | GCAGC | 7 cut(s) | 52, 68, 122, 179, 377, 421, 609 |
| BstV2I | GAAGAC | 1 cut(s) | 246 |
| BstZI | CGGCCG | 1 cut(s) | 196 |
| BsuRI | GGCC | 6 cut(s) | 3, 135, 198, 270, 276, 424 |
| BtrI | CACGTC | 1 cut(s) | 338 |
| BtsCI | GGATG | 1 cut(s) | 428 |
| BtsI | GCAGTG | 1 cut(s) | 60 |
| BtsIMutI | CAGTG | 2 cut(s) | 60, 243 |
| BveI | ACCTGC | 1 cut(s) | 384 |
| Cac8I | GCNNGC | 3 cut(s) | 346, 382, 566 |
| CciNI | GCGGCCGC | 1 cut(s) | 196 |
| CfoI | GCGC | 2 cut(s) | 306, 581 |
| Cfr10I | RCCGGY | 1 cut(s) | 344 |
| Cfr13I | GGNCC | 6 cut(s) | 268, 269, 274, 423, 442, 553 |
| Cfr9I | CCCGGG | 2 cut(s) | 271, 508 |
| CseI | GACGC | 2 cut(s) | 23, 313 |
| Csp6I | GTAC | 3 cut(s) | 187, 397, 520 |
| CviAII | CATG | 2 cut(s) | 287, 588 |
| CviQI | GTAC | 3 cut(s) | 187, 397, 520 |
| DdeI | CTNAG | 2 cut(s) | 171, 349 |
| DinI | GGCGCC | 1 cut(s) | 305 |
| DpnI | GATC | 3 cut(s) | 57, 559, 572 |
| DpnII | GATC | 3 cut(s) | 55, 557, 570 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 440 |
| DriI | GACNNNNNGTC | 1 cut(s) | 535 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 440 |
| EaeI | YGGCCR | 2 cut(s) | 133, 196 |
| EagI | CGGCCG | 1 cut(s) | 196 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 535 |
| EclXI | CGGCCG | 1 cut(s) | 196 |
| Eco24I | GRGCYC | 1 cut(s) | 272 |
| Eco31I | GGTCTC | 1 cut(s) | 522 |
| Eco47I | GGWCC | 2 cut(s) | 442, 553 |
| Eco52I | CGGCCG | 1 cut(s) | 196 |
| Eco57I | CTGAAG | 1 cut(s) | 199 |
| Eco72I | CACGTG | 1 cut(s) | 483 |
| Eco88I | CYCGRG | 4 cut(s) | 271, 404, 508, 547 |
| Eco91I | GGTNACC | 1 cut(s) | 161 |
| EcoO109I | RGGNCCY | 2 cut(s) | 268, 442 |
| EcoO65I | GGTNACC | 1 cut(s) | 161 |
| EcoT38I | GRGCYC | 1 cut(s) | 272 |
| EgeI | GGCGCC | 1 cut(s) | 305 |
| EheI | GGCGCC | 1 cut(s) | 305 |
| Esp3I | CGTCTC | 1 cut(s) | 41 |
| FaeI | CATG | 2 cut(s) | 290, 591 |
| FaiI | YATR | 5 cut(s) | 105, 282, 288, 525, 589 |
| FaqI | GGGAC | 3 cut(s) | 27, 342, 428 |
| FatI | CATG | 2 cut(s) | 286, 587 |
| FauI | CCCGC | 5 cut(s) | 4, 106, 174, 367, 405 |
| FokI | GGATG | 1 cut(s) | 415 |
| FriOI | GRGCYC | 1 cut(s) | 272 |
| GlaI | GCGC | 2 cut(s) | 305, 580 |
| GsaI | CCCAGC | 5 cut(s) | 153, 268, 390, 449, 461 |
| GsuI | CTGGAG | 1 cut(s) | 516 |
| HaeII | RGCGCY | 1 cut(s) | 307 |
| HaeIII | GGCC | 6 cut(s) | 3, 135, 198, 270, 276, 424 |
| HapII | CCGG | 4 cut(s) | 272, 345, 363, 509 |
| HgaI | GACGC | 2 cut(s) | 23, 313 |
| HhaI | GCGC | 2 cut(s) | 306, 581 |
| Hin1I | GRCGYC | 2 cut(s) | 304, 324 |
| Hin1II | CATG | 2 cut(s) | 290, 591 |
| Hin6I | GCGC | 2 cut(s) | 304, 579 |
| HinP1I | GCGC | 2 cut(s) | 304, 579 |
| HinfI | GANTC | 2 cut(s) | 117, 452 |
| HpaII | CCGG | 4 cut(s) | 272, 345, 363, 509 |
| HphI | GGTGA | 1 cut(s) | 168 |
| Hpy188I | TCNGA | 5 cut(s) | 433, 473, 489, 541, 557 |
| Hpy188III | TCNNGA | 1 cut(s) | 495 |
| Hpy99I | CGWCG | 1 cut(s) | 437 |
| HpyAV | CCTTC | 4 cut(s) | 174, 254, 293, 432 |
| HpyCH4IV | ACGT | 2 cut(s) | 337, 482 |
| HpyCH4V | TGCA | 4 cut(s) | 68, 110, 318, 393 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 71, 198, 201, 210, 261, 338, 381, 390 |
| HpyF3I | CTNAG | 2 cut(s) | 171, 349 |
| HpySE526I | ACGT | 2 cut(s) | 337, 482 |
| Hsp92I | GRCGYC | 2 cut(s) | 304, 324 |
| Hsp92II | CATG | 2 cut(s) | 290, 591 |
| HspAI | GCGC | 2 cut(s) | 304, 579 |
| KasI | GGCGCC | 1 cut(s) | 303 |
| KflI | GGGWCCC | 1 cut(s) | 442 |
| KpnI | GGTACC | 1 cut(s) | 523 |
| KroI | GCCGGC | 1 cut(s) | 344 |
| KroNI | GCCGGC | 1 cut(s) | 346 |
| Kzo9I | GATC | 3 cut(s) | 55, 557, 570 |
| LmnI | GCTCC | 2 cut(s) | 47, 71 |
| Lsp1109I | GCAGC | 7 cut(s) | 52, 68, 122, 179, 377, 421, 609 |
| MaeII | ACGT | 2 cut(s) | 337, 482 |
| MaeIII | GTNAC | 3 cut(s) | 161, 325, 478 |
| MalI | GATC | 3 cut(s) | 57, 559, 572 |
| MbiI | CCGCTC | 1 cut(s) | 74 |
| MboI | GATC | 3 cut(s) | 55, 557, 570 |
| MboII | GAAGA | 1 cut(s) | 251 |
| MhlI | GDGCHC | 1 cut(s) | 272 |
| MluI | ACGCGT | 1 cut(s) | 32 |
| Mly113I | GGCGCC | 1 cut(s) | 304 |
| MlyI | GAGTC | 2 cut(s) | 126, 446 |
| MmeI | TCCRAC | 4 cut(s) | 25, 456, 467, 564 |
| MnlI | CCTC | 5 cut(s) | 16, 152, 467, 491, 543 |
| MroNI | GCCGGC | 1 cut(s) | 344 |
| MseI | TTAA | 1 cut(s) | 235 |
| MslI | CAYNNNNRTG | 1 cut(s) | 105 |
| MspA1I | CMGCKG | 6 cut(s) | 113, 192, 204, 390, 412, 619 |
| MspI | CCGG | 4 cut(s) | 272, 345, 363, 509 |
| MspR9I | CCNGG | 4 cut(s) | 272, 273, 509, 510 |
| MvnI | CGCG | 2 cut(s) | 34, 579 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 71, 198, 201, 210, 261, 338, 381, 390 |
| NaeI | GCCGGC | 1 cut(s) | 346 |
| NarI | GGCGCC | 1 cut(s) | 304 |
| NciI | CCSGG | 4 cut(s) | 272, 273, 509, 510 |
| NdeII | GATC | 3 cut(s) | 55, 557, 570 |
| NgoMIV | GCCGGC | 1 cut(s) | 344 |
| NlaIII | CATG | 2 cut(s) | 290, 591 |
| NlaIV | GGNNCC | 7 cut(s) | 269, 270, 305, 443, 444, 521, 554 |
| NmuCI | GTSAC | 2 cut(s) | 325, 478 |
| NotI | GCGGCCGC | 1 cut(s) | 196 |
| NspI | RCATGY | 2 cut(s) | 290, 591 |
| PaeR7I | CTCGAG | 1 cut(s) | 547 |
| PciI | ACATGT | 1 cut(s) | 286 |
| PdiI | GCCGGC | 1 cut(s) | 346 |
| Ple19I | CGATCG | 1 cut(s) | 573 |
| PleI | GAGTC | 2 cut(s) | 125, 446 |
| PluTI | GGCGCC | 1 cut(s) | 307 |
| PmaCI | CACGTG | 1 cut(s) | 483 |
| PmlI | CACGTG | 1 cut(s) | 483 |
| PpsI | GAGTC | 2 cut(s) | 125, 446 |
| Ppu21I | YACGTR | 1 cut(s) | 483 |
| PpuMI | RGGWCCY | 1 cut(s) | 442 |
| PscI | ACATGT | 1 cut(s) | 286 |
| Psp5II | RGGWCCY | 1 cut(s) | 442 |
| PspCI | CACGTG | 1 cut(s) | 483 |
| PspEI | GGTNACC | 1 cut(s) | 161 |
| PspFI | CCCAGC | 5 cut(s) | 149, 264, 386, 445, 457 |
| PspN4I | GGNNCC | 7 cut(s) | 269, 270, 305, 443, 444, 521, 554 |
| PspOMI | GGGCCC | 1 cut(s) | 268 |
| PspPI | GGNCC | 6 cut(s) | 268, 269, 274, 423, 442, 553 |
| PspPPI | RGGWCCY | 1 cut(s) | 442 |
| PspXI | VCTCGAGB | 1 cut(s) | 547 |
| PstI | CTGCAG | 2 cut(s) | 70, 395 |
| PvuI | CGATCG | 1 cut(s) | 573 |
| PvuII | CAGCTG | 1 cut(s) | 390 |
| RsaI | GTAC | 3 cut(s) | 188, 398, 521 |
| RsaNI | GTAC | 3 cut(s) | 187, 397, 520 |
| RseI | CAYNNNNRTG | 1 cut(s) | 105 |
| SaqAI | TTAA | 1 cut(s) | 235 |
| Sau3AI | GATC | 3 cut(s) | 55, 557, 570 |
| Sau96I | GGNCC | 6 cut(s) | 268, 269, 274, 423, 442, 553 |
| SchI | GAGTC | 2 cut(s) | 126, 446 |
| ScrFI | CCNGG | 4 cut(s) | 272, 273, 509, 510 |
| SduI | GDGCHC | 1 cut(s) | 272 |
| SetI | ASST | 9 cut(s) | 83, 163, 179, 340, 392, 398, 478, 485, 548 |
| SfcI | CTRYAG | 2 cut(s) | 66, 391 |
| SfoI | GGCGCC | 1 cut(s) | 305 |
| Sfr274I | CTCGAG | 1 cut(s) | 547 |
| SinI | GGWCC | 2 cut(s) | 442, 553 |
| SlaI | CTCGAG | 1 cut(s) | 547 |
| SmaI | CCCGGG | 2 cut(s) | 273, 510 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 105 |
| SmlI | CTYRAG | 1 cut(s) | 547 |
| SmoI | CTYRAG | 1 cut(s) | 547 |
| SrfI | GCCCGGGC | 1 cut(s) | 273 |
| SspDI | GGCGCC | 1 cut(s) | 303 |
| StyD4I | CCNGG | 4 cut(s) | 270, 271, 507, 508 |
| TaiI | ACGT | 2 cut(s) | 340, 485 |
| TaqI | TCGA | 2 cut(s) | 548, 607 |
| TaqII | GACCGA | 2 cut(s) | 264, 563 |
| TauI | GCSGC | 8 cut(s) | 149, 198, 201, 204, 258, 344, 584, 587 |
| Tru1I | TTAA | 1 cut(s) | 235 |
| Tru9I | TTAA | 1 cut(s) | 235 |
| TscAI | CASTG | 2 cut(s) | 67, 250 |
| TseFI | GTSAC | 2 cut(s) | 325, 478 |
| TseI | GCWGC | 7 cut(s) | 65, 81, 110, 192, 390, 409, 597 |
| Tsp45I | GTSAC | 2 cut(s) | 325, 478 |
| TspDTI | ATGAA | 2 cut(s) | 43, 156 |
| TspGWI | ACGGA | 1 cut(s) | 450 |
| TspMI | CCCGGG | 2 cut(s) | 271, 508 |
| TspRI | CASTG | 2 cut(s) | 67, 250 |
| VpaK11BI | GGWCC | 2 cut(s) | 442, 553 |
| XceI | RCATGY | 2 cut(s) | 290, 591 |
| XhoI | CTCGAG | 1 cut(s) | 547 |
| XmaI | CCCGGG | 2 cut(s) | 271, 508 |