Putative gypsy type transposon
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 246, 478 |
| AatII | GACGTC | 1 cut(s) | 1460 |
| Acc36I | ACCTGC | 2 cut(s) | 246, 478 |
| AccB1I | GGYRCC | 6 cut(s) | 468, 514, 1019, 1129, 1190, 1557 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 319 |
| AccBSI | CCGCTC | 3 cut(s) | 1480, 1621, 1633 |
| AccI | GTMKAC | 1 cut(s) | 749 |
| AccII | CGCG | 3 cut(s) | 879, 1271, 1812 |
| AccIII | TCCGGA | 1 cut(s) | 949 |
| AclWI | GGATC | 5 cut(s) | 941, 1186, 1194, 1207, 1689 |
| AcoI | YGGCCR | 3 cut(s) | 772, 1231, 1605 |
| AcsI | RAATTY | 5 cut(s) | 329, 351, 532, 644, 706 |
| AcuI | CTGAAG | 2 cut(s) | 1202, 1697 |
| AcyI | GRCGYC | 4 cut(s) | 469, 515, 1191, 1457 |
| AdeI | CACNNNGTG | 1 cut(s) | 760 |
| AfaI | GTAC | 1 cut(s) | 911 |
| AflIII | ACRYGT | 1 cut(s) | 363 |
| AgsI | TTSAA | 1 cut(s) | 538 |
| AjiI | CACGTC | 1 cut(s) | 1645 |
| AjnI | CCWGG | 3 cut(s) | 149, 1449, 1626 |
| AleI | CACNNNNGTG | 3 cut(s) | 1017, 1208, 1748 |
| AluBI | AGCT | 8 cut(s) | 622, 767, 1407, 1468, 1519, 1603, 1654, 1787 |
| AluI | AGCT | 8 cut(s) | 622, 767, 1407, 1468, 1519, 1603, 1654, 1787 |
| Alw21I | GWGCWC | 1 cut(s) | 264 |
| Alw26I | GTCTC | 6 cut(s) | 896, 947, 1268, 1511, 1520, 1651 |
| Alw44I | GTGCAC | 1 cut(s) | 260 |
| AlwI | GGATC | 5 cut(s) | 941, 1186, 1194, 1207, 1689 |
| Aor13HI | TCCGGA | 1 cut(s) | 949 |
| AoxI | GGCC | 9 cut(s) | 334, 671, 772, 1056, 1109, 1231, 1284, 1605, 1806 |
| ApaI | GGGCCC | 1 cut(s) | 1288 |
| ApaLI | GTGCAC | 1 cut(s) | 260 |
| ApeKI | GCWGC | 7 cut(s) | 206, 679, 694, 926, 1000, 1435, 1583 |
| ApoI | RAATTY | 5 cut(s) | 329, 351, 532, 644, 706 |
| AseI | ATTAAT | 1 cut(s) | 455 |
| AspA2I | CCTAGG | 2 cut(s) | 797, 1780 |
| AspLEI | GCGC | 7 cut(s) | 385, 471, 517, 881, 964, 1193, 1377 |
| AspS9I | GGNCC | 9 cut(s) | 419, 564, 1030, 1057, 1109, 1284, 1285, 1624, 1807 |
| AsuC2I | CCSGG | 1 cut(s) | 1472 |
| AsuHPI | GGTGA | 8 cut(s) | 91, 127, 502, 543, 1004, 1327, 1389, 1762 |
| AvaII | GGWCC | 4 cut(s) | 419, 564, 1030, 1624 |
| AvrII | CCTAGG | 2 cut(s) | 797, 1780 |
| BaeGI | GKGCMC | 2 cut(s) | 264, 1288 |
| BalI | TGGCCA | 1 cut(s) | 1233 |
| BamHI | GGATCC | 1 cut(s) | 1199 |
| BanI | GGYRCC | 6 cut(s) | 468, 514, 1019, 1129, 1190, 1557 |
| BanII | GRGCYC | 2 cut(s) | 797, 1288 |
| BauI | CACGAG | 3 cut(s) | 263, 790, 851 |
| BbsI | GAAGAC | 1 cut(s) | 941 |
| Bbv12I | GWGCWC | 1 cut(s) | 264 |
| BbvCI | CCTCAGC | 1 cut(s) | 1788 |
| BbvI | GCAGC | 7 cut(s) | 193, 666, 681, 938, 1012, 1422, 1570 |
| BccI | CCATC | 5 cut(s) | 196, 373, 582, 1241, 1286 |
| BceAI | ACGGC | 2 cut(s) | 1592, 1598 |
| BciT130I | CCWGG | 3 cut(s) | 151, 1451, 1628 |
| BclI | TGATCA | 2 cut(s) | 1390, 1639 |
| BcnI | CCSGG | 1 cut(s) | 1472 |
| BcoDI | GTCTC | 6 cut(s) | 896, 947, 1268, 1511, 1520, 1651 |
| BfaI | CTAG | 4 cut(s) | 798, 1361, 1655, 1781 |
| BfmI | CTRYAG | 1 cut(s) | 1071 |
| BfoI | RGCGCY | 5 cut(s) | 386, 472, 518, 965, 1194 |
| BfuAI | ACCTGC | 2 cut(s) | 246, 478 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 247 |
| BglII | AGATCT | 1 cut(s) | 1713 |
| BlnI | CCTAGG | 2 cut(s) | 797, 1780 |
| BlpI | GCTNAGC | 1 cut(s) | 1408 |
| Bme1390I | CCNGG | 4 cut(s) | 151, 1451, 1472, 1628 |
| Bme18I | GGWCC | 4 cut(s) | 419, 564, 1030, 1624 |
| BmgBI | CACGTC | 1 cut(s) | 1645 |
| BmgT120I | GGNCC | 9 cut(s) | 419, 564, 1030, 1057, 1109, 1284, 1285, 1624, 1807 |
| BmrFI | CCNGG | 4 cut(s) | 151, 1451, 1472, 1628 |
| BmrI | ACTGGG | 1 cut(s) | 766 |
| BmsI | GCATC | 5 cut(s) | 34, 987, 1429, 1570, 1579 |
| BmuI | ACTGGG | 1 cut(s) | 766 |
| BoxI | GACNNNNGTC | 1 cut(s) | 745 |
| BpiI | GAAGAC | 1 cut(s) | 941 |
| BpmI | CTGGAG | 5 cut(s) | 296, 1069, 1184, 1649, 1781 |
| Bpu10I | CCTNAGC | 3 cut(s) | 683, 1695, 1788 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1408 |
| BpuMI | CCSGG | 1 cut(s) | 1472 |
| BsaHI | GRCGYC | 4 cut(s) | 469, 515, 1191, 1457 |
| BsaI | GGTCTC | 3 cut(s) | 1268, 1511, 1520 |
| BsaWI | WCCGGW | 1 cut(s) | 949 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1297, 1327 |
| Bse118I | RCCGGY | 2 cut(s) | 1022, 1135 |
| Bse1I | ACTGG | 5 cut(s) | 130, 761, 963, 1048, 1212 |
| Bse3DI | GCAATG | 1 cut(s) | 1152 |
| BseAI | TCCGGA | 1 cut(s) | 949 |
| BseBI | CCWGG | 3 cut(s) | 151, 1451, 1628 |
| BseGI | GGATG | 2 cut(s) | 593, 1594 |
| BseMI | GCAATG | 1 cut(s) | 1152 |
| BseNI | ACTGG | 5 cut(s) | 130, 761, 963, 1048, 1212 |
| BseRI | GAGGAG | 6 cut(s) | 83, 869, 1237, 1268, 1508, 1805 |
| BseSI | GKGCMC | 2 cut(s) | 264, 1288 |
| BseXI | GCAGC | 7 cut(s) | 193, 666, 681, 938, 1012, 1422, 1570 |
| BseYI | CCCAGC | 2 cut(s) | 1157, 1519 |
| Bsh1236I | CGCG | 3 cut(s) | 879, 1271, 1812 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1383 |
| BshFI | GGCC | 9 cut(s) | 336, 673, 774, 1058, 1111, 1233, 1286, 1607, 1808 |
| BshNI | GGYRCC | 6 cut(s) | 468, 514, 1019, 1129, 1190, 1557 |
| BsiEI | CGRYCG | 1 cut(s) | 1383 |
| BsiHKAI | GWGCWC | 1 cut(s) | 264 |
| BsiSI | CCGG | 5 cut(s) | 585, 950, 1023, 1136, 1471 |
| BslFI | GGGAC | 3 cut(s) | 577, 1277, 1637 |
| BsmAI | GTCTC | 6 cut(s) | 896, 947, 1268, 1511, 1520, 1651 |
| BsmBI | CGTCTC | 1 cut(s) | 1651 |
| BsmFI | GGGAC | 3 cut(s) | 577, 1277, 1637 |
| BsmI | GAATGC | 1 cut(s) | 1095 |
| BsnI | GGCC | 9 cut(s) | 336, 673, 774, 1058, 1111, 1233, 1286, 1607, 1808 |
| Bso31I | GGTCTC | 3 cut(s) | 1268, 1511, 1520 |
| Bsp120I | GGGCCC | 1 cut(s) | 1284 |
| Bsp1286I | GDGCHC | 3 cut(s) | 264, 797, 1288 |
| Bsp13I | TCCGGA | 1 cut(s) | 949 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1408 |
| BspANI | GGCC | 9 cut(s) | 336, 673, 774, 1058, 1111, 1233, 1286, 1607, 1808 |
| BspEI | TCCGGA | 1 cut(s) | 949 |
| BspFNI | CGCG | 3 cut(s) | 879, 1271, 1812 |
| BspMI | ACCTGC | 2 cut(s) | 246, 478 |
| BspPI | GGATC | 5 cut(s) | 941, 1186, 1194, 1207, 1689 |
| BspT107I | GGYRCC | 6 cut(s) | 468, 514, 1019, 1129, 1190, 1557 |
| BspTNI | GGTCTC | 3 cut(s) | 1268, 1511, 1520 |
| BsrBI | CCGCTC | 3 cut(s) | 1480, 1621, 1633 |
| BsrDI | GCAATG | 1 cut(s) | 1152 |
| BsrFI | RCCGGY | 2 cut(s) | 1022, 1135 |
| BsrI | ACTGG | 5 cut(s) | 130, 761, 963, 1048, 1212 |
| BssAI | RCCGGY | 2 cut(s) | 1022, 1135 |
| BssNI | GRCGYC | 4 cut(s) | 469, 515, 1191, 1457 |
| BssSI | CACGAG | 3 cut(s) | 263, 790, 851 |
| BssT1I | CCWWGG | 5 cut(s) | 554, 797, 1015, 1566, 1780 |
| Bst2BI | CACGAG | 3 cut(s) | 263, 790, 851 |
| Bst2UI | CCWGG | 3 cut(s) | 151, 1451, 1628 |
| Bst6I | CTCTTC | 3 cut(s) | 129, 1292, 1748 |
| BstACI | GRCGYC | 4 cut(s) | 469, 515, 1191, 1457 |
| BstDSI | CCRYGG | 3 cut(s) | 426, 1033, 1810 |
| BstEII | GGTNACC | 1 cut(s) | 1333 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 657, 1565 |
| BstF5I | GGATG | 2 cut(s) | 593, 1594 |
| BstFNI | CGCG | 3 cut(s) | 879, 1271, 1812 |
| BstH2I | RGCGCY | 5 cut(s) | 386, 472, 518, 965, 1194 |
| BstHHI | GCGC | 7 cut(s) | 385, 471, 517, 881, 964, 1193, 1377 |
| BstMAI | GTCTC | 6 cut(s) | 896, 947, 1268, 1511, 1520, 1651 |
| BstMCI | CGRYCG | 1 cut(s) | 1383 |
| BstNI | CCWGG | 3 cut(s) | 151, 1451, 1628 |
| BstNSI | RCATGY | 2 cut(s) | 254, 367 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 745 |
| BstPI | GGTNACC | 1 cut(s) | 1333 |
| BstSCI | CCNGG | 4 cut(s) | 149, 1449, 1470, 1626 |
| BstSFI | CTRYAG | 1 cut(s) | 1071 |
| BstSLI | GKGCMC | 2 cut(s) | 264, 1288 |
| BstUI | CGCG | 3 cut(s) | 879, 1271, 1812 |
| BstV1I | GCAGC | 7 cut(s) | 193, 666, 681, 938, 1012, 1422, 1570 |
| BstV2I | GAAGAC | 1 cut(s) | 941 |
| BstX2I | RGATCY | 2 cut(s) | 1199, 1713 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1210 |
| BstYI | RGATCY | 2 cut(s) | 1199, 1713 |
| BsuRI | GGCC | 9 cut(s) | 336, 673, 774, 1058, 1111, 1233, 1286, 1607, 1808 |
| BtgI | CCRYGG | 3 cut(s) | 426, 1033, 1810 |
| BtrI | CACGTC | 1 cut(s) | 1645 |
| BtsCI | GGATG | 2 cut(s) | 593, 1594 |
| BtsI | GCAGTG | 1 cut(s) | 487 |
| BtsIMutI | CAGTG | 6 cut(s) | 223, 487, 754, 956, 1205, 1743 |
| BveI | ACCTGC | 2 cut(s) | 246, 478 |
| CfoI | GCGC | 7 cut(s) | 385, 471, 517, 881, 964, 1193, 1377 |
| Cfr10I | RCCGGY | 2 cut(s) | 1022, 1135 |
| Cfr13I | GGNCC | 9 cut(s) | 419, 564, 1030, 1057, 1109, 1284, 1285, 1624, 1807 |
| Cfr42I | CCGCGG | 1 cut(s) | 1813 |
| CseI | GACGC | 1 cut(s) | 1277 |
| Csp6I | GTAC | 1 cut(s) | 910 |
| CviAII | CATG | 4 cut(s) | 251, 364, 547, 871 |
| CviQI | GTAC | 1 cut(s) | 910 |
| DinI | GGCGCC | 3 cut(s) | 470, 516, 1192 |
| DraIII | CACNNNGTG | 1 cut(s) | 760 |
| EaeI | YGGCCR | 3 cut(s) | 772, 1231, 1605 |
| Eam1104I | CTCTTC | 3 cut(s) | 129, 1292, 1748 |
| EarI | CTCTTC | 3 cut(s) | 129, 1292, 1748 |
| EciI | GGCGGA | 4 cut(s) | 204, 446, 1154, 1305 |
| Eco130I | CCWWGG | 5 cut(s) | 554, 797, 1015, 1566, 1780 |
| Eco24I | GRGCYC | 2 cut(s) | 797, 1288 |
| Eco31I | GGTCTC | 3 cut(s) | 1268, 1511, 1520 |
| Eco47I | GGWCC | 4 cut(s) | 419, 564, 1030, 1624 |
| Eco57I | CTGAAG | 2 cut(s) | 1202, 1697 |
| Eco91I | GGTNACC | 1 cut(s) | 1333 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 657, 1565 |
| EcoO109I | RGGNCCY | 4 cut(s) | 564, 1057, 1284, 1624 |
| EcoO65I | GGTNACC | 1 cut(s) | 1333 |
| EcoRI | GAATTC | 1 cut(s) | 706 |
| EcoRII | CCWGG | 3 cut(s) | 149, 1449, 1626 |
| EcoT14I | CCWWGG | 5 cut(s) | 554, 797, 1015, 1566, 1780 |
| EcoT38I | GRGCYC | 2 cut(s) | 797, 1288 |
| EgeI | GGCGCC | 3 cut(s) | 470, 516, 1192 |
| EheI | GGCGCC | 3 cut(s) | 470, 516, 1192 |
| ErhI | CCWWGG | 5 cut(s) | 554, 797, 1015, 1566, 1780 |
| Esp3I | CGTCTC | 1 cut(s) | 1651 |
| FaeI | CATG | 4 cut(s) | 254, 367, 550, 874 |
| FaqI | GGGAC | 3 cut(s) | 577, 1277, 1637 |
| FatI | CATG | 4 cut(s) | 250, 363, 546, 870 |
| FbaI | TGATCA | 2 cut(s) | 1390, 1639 |
| FblI | GTMKAC | 1 cut(s) | 749 |
| FokI | GGATG | 2 cut(s) | 600, 1601 |
| FriOI | GRGCYC | 2 cut(s) | 797, 1288 |
| FspBI | CTAG | 4 cut(s) | 798, 1361, 1655, 1781 |
| GlaI | GCGC | 7 cut(s) | 384, 470, 516, 880, 963, 1192, 1376 |
| GsaI | CCCAGC | 2 cut(s) | 1161, 1523 |
| GsuI | CTGGAG | 5 cut(s) | 296, 1069, 1184, 1649, 1781 |
| HaeII | RGCGCY | 5 cut(s) | 386, 472, 518, 965, 1194 |
| HaeIII | GGCC | 9 cut(s) | 336, 673, 774, 1058, 1111, 1233, 1286, 1607, 1808 |
| HapII | CCGG | 5 cut(s) | 585, 950, 1023, 1136, 1471 |
| HgaI | GACGC | 1 cut(s) | 1277 |
| HhaI | GCGC | 7 cut(s) | 385, 471, 517, 881, 964, 1193, 1377 |
| Hin1I | GRCGYC | 4 cut(s) | 469, 515, 1191, 1457 |
| Hin1II | CATG | 4 cut(s) | 254, 367, 550, 874 |
| Hin6I | GCGC | 7 cut(s) | 383, 469, 515, 879, 962, 1191, 1375 |
| HinP1I | GCGC | 7 cut(s) | 383, 469, 515, 879, 962, 1191, 1375 |
| HincII | GTYRAC | 3 cut(s) | 178, 214, 787 |
| HindII | GTYRAC | 3 cut(s) | 178, 214, 787 |
| HinfI | GANTC | 7 cut(s) | 143, 499, 542, 824, 967, 1241, 1727 |
| HpaII | CCGG | 5 cut(s) | 585, 950, 1023, 1136, 1471 |
| HphI | GGTGA | 8 cut(s) | 91, 127, 502, 543, 1004, 1327, 1389, 1762 |
| Hpy166II | GTNNAC | 7 cut(s) | 178, 214, 262, 493, 750, 787, 1030 |
| Hpy188I | TCNGA | 5 cut(s) | 409, 659, 976, 1221, 1246 |
| Hpy188III | TCNNGA | 5 cut(s) | 20, 313, 529, 950, 1361 |
| Hpy8I | GTNNAC | 7 cut(s) | 178, 214, 262, 493, 750, 787, 1030 |
| Hpy99I | CGWCG | 7 cut(s) | 507, 835, 944, 1271, 1459, 1462, 1613 |
| HpyAV | CCTTC | 6 cut(s) | 532, 577, 1111, 1168, 1672, 1699 |
| HpyCH4IV | ACGT | 2 cut(s) | 1457, 1644 |
| HpyCH4V | TGCA | 5 cut(s) | 57, 262, 480, 1000, 1438 |
| HpySE526I | ACGT | 2 cut(s) | 1457, 1644 |
| Hsp92I | GRCGYC | 4 cut(s) | 469, 515, 1191, 1457 |
| Hsp92II | CATG | 4 cut(s) | 254, 367, 550, 874 |
| HspAI | GCGC | 7 cut(s) | 383, 469, 515, 879, 962, 1191, 1375 |
| KasI | GGCGCC | 3 cut(s) | 468, 514, 1190 |
| Kpn2I | TCCGGA | 1 cut(s) | 949 |
| KroI | GCCGGC | 2 cut(s) | 1022, 1135 |
| KroNI | GCCGGC | 2 cut(s) | 1024, 1137 |
| Ksp22I | TGATCA | 2 cut(s) | 1390, 1639 |
| KspI | CCGCGG | 1 cut(s) | 1813 |
| Lsp1109I | GCAGC | 7 cut(s) | 193, 666, 681, 938, 1012, 1422, 1570 |
| LweI | GCATC | 5 cut(s) | 34, 987, 1429, 1570, 1579 |
| MaeI | CTAG | 4 cut(s) | 798, 1361, 1655, 1781 |
| MaeII | ACGT | 2 cut(s) | 1457, 1644 |
| MaeIII | GTNAC | 4 cut(s) | 286, 549, 1063, 1333 |
| MbiI | CCGCTC | 3 cut(s) | 1480, 1621, 1633 |
| MboII | GAAGA | 6 cut(s) | 53, 146, 265, 946, 1309, 1765 |
| MflI | RGATCY | 2 cut(s) | 1199, 1713 |
| MhlI | GDGCHC | 3 cut(s) | 264, 797, 1288 |
| MlsI | TGGCCA | 1 cut(s) | 1233 |
| MluCI | AATT | 7 cut(s) | 329, 351, 452, 521, 532, 644, 706 |
| MluNI | TGGCCA | 1 cut(s) | 1233 |
| Mly113I | GGCGCC | 3 cut(s) | 469, 515, 1191 |
| MlyI | GAGTC | 5 cut(s) | 152, 508, 976, 1235, 1736 |
| MmeI | TCCRAC | 3 cut(s) | 432, 446, 673 |
| Mox20I | TGGCCA | 1 cut(s) | 1233 |
| MreI | CGCCGGCG | 1 cut(s) | 1135 |
| MroI | TCCGGA | 1 cut(s) | 949 |
| MroNI | GCCGGC | 2 cut(s) | 1022, 1135 |
| MscI | TGGCCA | 1 cut(s) | 1233 |
| MseI | TTAA | 3 cut(s) | 455, 1551, 1828 |
| MslI | CAYNNNNRTG | 4 cut(s) | 447, 1017, 1208, 1748 |
| Msp20I | TGGCCA | 1 cut(s) | 1233 |
| MspA1I | CMGCKG | 8 cut(s) | 107, 173, 245, 679, 1196, 1723, 1805, 1812 |
| MspI | CCGG | 5 cut(s) | 585, 950, 1023, 1136, 1471 |
| MspR9I | CCNGG | 4 cut(s) | 151, 1451, 1472, 1628 |
| Mva1269I | GAATGC | 1 cut(s) | 1095 |
| MvaI | CCWGG | 3 cut(s) | 151, 1451, 1628 |
| MvnI | CGCG | 3 cut(s) | 879, 1271, 1812 |
| NaeI | GCCGGC | 2 cut(s) | 1024, 1137 |
| NarI | GGCGCC | 3 cut(s) | 469, 515, 1191 |
| NciI | CCSGG | 1 cut(s) | 1472 |
| NgoMIV | GCCGGC | 2 cut(s) | 1022, 1135 |
| NlaIII | CATG | 4 cut(s) | 254, 367, 550, 874 |
| NmuCI | GTSAC | 3 cut(s) | 286, 549, 1333 |
| NspI | RCATGY | 2 cut(s) | 254, 367 |
| OliI | CACNNNNGTG | 3 cut(s) | 1017, 1208, 1748 |
| PaeI | GCATGC | 1 cut(s) | 254 |
| PaqCI | CACCTGC | 2 cut(s) | 246, 478 |
| PciI | ACATGT | 1 cut(s) | 363 |
| PctI | GAATGC | 1 cut(s) | 1095 |
| PdiI | GCCGGC | 2 cut(s) | 1024, 1137 |
| PfeI | GAWTC | 2 cut(s) | 542, 824 |
| PflFI | GACNNNGTC | 1 cut(s) | 637 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 319 |
| PleI | GAGTC | 5 cut(s) | 151, 507, 975, 1235, 1735 |
| PluTI | GGCGCC | 3 cut(s) | 472, 518, 1194 |
| PpsI | GAGTC | 5 cut(s) | 151, 507, 975, 1235, 1735 |
| PpuMI | RGGWCCY | 2 cut(s) | 564, 1624 |
| PscI | ACATGT | 1 cut(s) | 363 |
| PshAI | GACNNNNGTC | 1 cut(s) | 745 |
| PshBI | ATTAAT | 1 cut(s) | 455 |
| Psp5II | RGGWCCY | 2 cut(s) | 564, 1624 |
| Psp6I | CCWGG | 3 cut(s) | 149, 1449, 1626 |
| PspEI | GGTNACC | 1 cut(s) | 1333 |
| PspFI | CCCAGC | 2 cut(s) | 1157, 1519 |
| PspGI | CCWGG | 3 cut(s) | 149, 1449, 1626 |
| PspOMI | GGGCCC | 1 cut(s) | 1284 |
| PspPI | GGNCC | 9 cut(s) | 419, 564, 1030, 1057, 1109, 1284, 1285, 1624, 1807 |
| PspPPI | RGGWCCY | 2 cut(s) | 564, 1624 |
| PsuI | RGATCY | 2 cut(s) | 1199, 1713 |
| PsyI | GACNNNGTC | 1 cut(s) | 637 |
| RsaI | GTAC | 1 cut(s) | 911 |
| RsaNI | GTAC | 1 cut(s) | 910 |
| RseI | CAYNNNNRTG | 4 cut(s) | 447, 1017, 1208, 1748 |
| SacII | CCGCGG | 1 cut(s) | 1813 |
| SaqAI | TTAA | 3 cut(s) | 455, 1551, 1828 |
| Sau96I | GGNCC | 9 cut(s) | 419, 564, 1030, 1057, 1109, 1284, 1285, 1624, 1807 |
| SchI | GAGTC | 5 cut(s) | 152, 508, 976, 1235, 1736 |
| ScrFI | CCNGG | 4 cut(s) | 151, 1451, 1472, 1628 |
| SduI | GDGCHC | 3 cut(s) | 264, 797, 1288 |
| SfaNI | GCATC | 5 cut(s) | 34, 987, 1429, 1570, 1579 |
| SfcI | CTRYAG | 1 cut(s) | 1071 |
| SfoI | GGCGCC | 3 cut(s) | 470, 516, 1192 |
| Sfr303I | CCGCGG | 1 cut(s) | 1813 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1135 |
| SgrBI | CCGCGG | 1 cut(s) | 1813 |
| SinI | GGWCC | 4 cut(s) | 419, 564, 1030, 1624 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 447, 1017, 1208, 1748 |
| SphI | GCATGC | 1 cut(s) | 254 |
| Sse9I | AATT | 7 cut(s) | 329, 351, 452, 521, 532, 644, 706 |
| SspDI | GGCGCC | 3 cut(s) | 468, 514, 1190 |
| SspMI | CTAG | 4 cut(s) | 798, 1361, 1655, 1781 |
| StyD4I | CCNGG | 4 cut(s) | 149, 1449, 1470, 1626 |
| StyI | CCWWGG | 5 cut(s) | 554, 797, 1015, 1566, 1780 |
| TaiI | ACGT | 2 cut(s) | 1460, 1647 |
| TaqI | TCGA | 6 cut(s) | 528, 608, 641, 710, 1379, 1460 |
| TaqII | GACCGA | 1 cut(s) | 107 |
| TasI | AATT | 7 cut(s) | 329, 351, 452, 521, 532, 644, 706 |
| TauI | GCSGC | 9 cut(s) | 50, 102, 1114, 1135, 1171, 1196, 1483, 1808, 1815 |
| TfiI | GAWTC | 2 cut(s) | 542, 824 |
| Tru1I | TTAA | 3 cut(s) | 455, 1551, 1828 |
| Tru9I | TTAA | 3 cut(s) | 455, 1551, 1828 |
| TscAI | CASTG | 6 cut(s) | 223, 487, 761, 963, 1212, 1750 |
| TseFI | GTSAC | 3 cut(s) | 286, 549, 1333 |
| TseI | GCWGC | 7 cut(s) | 206, 679, 694, 926, 1000, 1435, 1583 |
| Tsp45I | GTSAC | 3 cut(s) | 286, 549, 1333 |
| TspDTI | ATGAA | 2 cut(s) | 465, 887 |
| TspGWI | ACGGA | 2 cut(s) | 247, 819 |
| TspRI | CASTG | 6 cut(s) | 223, 487, 761, 963, 1212, 1750 |
| Tth111I | GACNNNGTC | 1 cut(s) | 637 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 319 |
| VneI | GTGCAC | 1 cut(s) | 260 |
| VpaK11BI | GGWCC | 4 cut(s) | 419, 564, 1030, 1624 |
| VspI | ATTAAT | 1 cut(s) | 455 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 657, 1565 |
| XapI | RAATTY | 5 cut(s) | 329, 351, 532, 644, 706 |
| XbaI | TCTAGA | 1 cut(s) | 1360 |
| XceI | RCATGY | 2 cut(s) | 254, 367 |
| XcmI | CCANNNNNNNNNTGG | 5 cut(s) | 479, 1013, 1159, 1327, 1537 |
| XmaJI | CCTAGG | 2 cut(s) | 797, 1780 |
| XmiI | GTMKAC | 1 cut(s) | 749 |
| XspI | CTAG | 4 cut(s) | 798, 1361, 1655, 1781 |
| ZraI | GACGTC | 1 cut(s) | 1458 |