No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 83, 700 |
| Acc16I | TGCGCA | 1 cut(s) | 361 |
| Acc36I | ACCTGC | 2 cut(s) | 83, 700 |
| Acc65I | GGTACC | 2 cut(s) | 562, 641 |
| AccB1I | GGYRCC | 6 cut(s) | 4, 500, 562, 641, 1454, 1577 |
| AccBSI | CCGCTC | 5 cut(s) | 717, 1006, 1072, 1084, 1461 |
| AccI | GTMKAC | 1 cut(s) | 64 |
| AccII | CGCG | 5 cut(s) | 127, 297, 333, 338, 1424 |
| AclWI | GGATC | 4 cut(s) | 422, 1140, 1159, 1618 |
| AcoI | YGGCCR | 2 cut(s) | 733, 834 |
| AcuI | CTGAAG | 7 cut(s) | 156, 838, 959, 1148, 1154, 1218, 1373 |
| AcyI | GRCGYC | 2 cut(s) | 501, 1589 |
| AfaI | GTAC | 4 cut(s) | 538, 564, 643, 1295 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 131, 679, 1071, 1129, 1174, 1255, 1450, 1651, 1655 |
| AflIII | ACRYGT | 1 cut(s) | 336 |
| AgsI | TTSAA | 2 cut(s) | 923, 929 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 511, 825 |
| AhlI | ACTAGT | 1 cut(s) | 577 |
| AjnI | CCWGG | 3 cut(s) | 1017, 1397, 1606 |
| AleI | CACNNNNGTG | 1 cut(s) | 1583 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 761, 793 |
| Alw26I | GTCTC | 2 cut(s) | 962, 1102 |
| AlwI | GGATC | 4 cut(s) | 422, 1140, 1159, 1618 |
| Ama87I | CYCGRG | 3 cut(s) | 648, 1079, 1443 |
| AoxI | GGCC | 7 cut(s) | 626, 669, 733, 834, 861, 978, 1637 |
| ApaI | GGGCCC | 1 cut(s) | 673 |
| ApeKI | GCWGC | 9 cut(s) | 44, 271, 619, 692, 1184, 1331, 1334, 1556, 1626 |
| AseI | ATTAAT | 1 cut(s) | 369 |
| Asp718I | GGTACC | 2 cut(s) | 562, 641 |
| AspLEI | GCGC | 4 cut(s) | 76, 299, 362, 503 |
| AspS9I | GGNCC | 6 cut(s) | 24, 669, 670, 819, 1075, 1637 |
| AsuHPI | GGTGA | 8 cut(s) | 107, 250, 694, 724, 1390, 1493, 1597, 1670 |
| AsuNHI | GCTAGC | 1 cut(s) | 403 |
| AvaI | CYCGRG | 3 cut(s) | 648, 1079, 1443 |
| AvaII | GGWCC | 3 cut(s) | 24, 819, 1075 |
| BaeGI | GKGCMC | 2 cut(s) | 673, 1459 |
| BanI | GGYRCC | 6 cut(s) | 4, 500, 562, 641, 1454, 1577 |
| BanII | GRGCYC | 4 cut(s) | 673, 888, 1422, 1598 |
| BbsI | GAAGAC | 1 cut(s) | 245 |
| BbvCI | CCTCAGC | 1 cut(s) | 1449 |
| BbvI | GCAGC | 9 cut(s) | 31, 258, 631, 679, 1171, 1318, 1346, 1543, 1638 |
| BccI | CCATC | 5 cut(s) | 125, 346, 809, 1030, 1568 |
| BceAI | ACGGC | 3 cut(s) | 91, 821, 849 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 323, 357 |
| BciT130I | CCWGG | 3 cut(s) | 1019, 1399, 1608 |
| BcoDI | GTCTC | 2 cut(s) | 962, 1102 |
| BcuI | ACTAGT | 1 cut(s) | 577 |
| BfaI | CTAG | 6 cut(s) | 380, 404, 578, 722, 1106, 1631 |
| BfmI | CTRYAG | 1 cut(s) | 1332 |
| BfoI | RGCGCY | 2 cut(s) | 77, 504 |
| BfuAI | ACCTGC | 2 cut(s) | 83, 700 |
| BlpI | GCTNAGC | 1 cut(s) | 411 |
| Bme1390I | CCNGG | 3 cut(s) | 1019, 1399, 1608 |
| Bme18I | GGWCC | 3 cut(s) | 24, 819, 1075 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 511, 825 |
| BmeT110I | CYCGRG | 3 cut(s) | 648, 1079, 1443 |
| BmgT120I | GGNCC | 6 cut(s) | 24, 669, 670, 819, 1075, 1637 |
| BmrFI | CCNGG | 3 cut(s) | 1019, 1399, 1608 |
| BmrI | ACTGGG | 2 cut(s) | 458, 1384 |
| BmsI | GCATC | 5 cut(s) | 468, 493, 1030, 1377, 1394 |
| BmtI | GCTAGC | 1 cut(s) | 407 |
| BmuI | ACTGGG | 2 cut(s) | 458, 1384 |
| BoxI | GACNNNNGTC | 3 cut(s) | 249, 422, 836 |
| BpiI | GAAGAC | 1 cut(s) | 245 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1082, 1114 |
| BpmI | CTGGAG | 5 cut(s) | 788, 1232, 1436, 1590, 1673 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1146, 1449, 1462 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 411 |
| BpuEI | CTTGAG | 1 cut(s) | 122 |
| BsaAI | YACGTR | 1 cut(s) | 68 |
| BsaHI | GRCGYC | 2 cut(s) | 501, 1589 |
| BsaI | GGTCTC | 1 cut(s) | 962 |
| BsaJI | CCNNGG | 6 cut(s) | 31, 77, 125, 544, 1017, 1581 |
| BsaWI | WCCGGW | 1 cut(s) | 12 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 761, 791, 1501, 1531 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 131, 679, 1071, 1129, 1174, 1255, 1450, 1651, 1655 |
| Bse1I | ACTGG | 4 cut(s) | 451, 464, 1379, 1490 |
| BseBI | CCWGG | 3 cut(s) | 1019, 1399, 1608 |
| BseDI | CCNNGG | 6 cut(s) | 31, 77, 125, 544, 1017, 1581 |
| BseGI | GGATG | 4 cut(s) | 136, 820, 1045, 1579 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 131, 679, 1071, 1129, 1174, 1255, 1450, 1651, 1655 |
| BseMII | CTCAG | 6 cut(s) | 425, 753, 1230, 1440, 1476, 1671 |
| BseNI | ACTGG | 4 cut(s) | 451, 464, 1379, 1490 |
| BseSI | GKGCMC | 2 cut(s) | 673, 1459 |
| BseX3I | CGGCCG | 1 cut(s) | 834 |
| BseXI | GCAGC | 9 cut(s) | 31, 258, 631, 679, 1171, 1318, 1346, 1543, 1638 |
| BseYI | CCCAGC | 2 cut(s) | 398, 1634 |
| BsgI | GTGCAG | 3 cut(s) | 30, 728, 1497 |
| Bsh1236I | CGCG | 5 cut(s) | 127, 297, 333, 338, 1424 |
| Bsh1285I | CGRYCG | 2 cut(s) | 426, 837 |
| BshFI | GGCC | 7 cut(s) | 628, 671, 735, 836, 863, 980, 1639 |
| BshNI | GGYRCC | 6 cut(s) | 4, 500, 562, 641, 1454, 1577 |
| BsiEI | CGRYCG | 2 cut(s) | 426, 837 |
| BsiHKCI | CYCGRG | 3 cut(s) | 648, 1079, 1443 |
| BsiSI | CCGG | 1 cut(s) | 13 |
| BslFI | GGGAC | 2 cut(s) | 832, 1088 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 131, 679, 1071, 1129, 1174, 1255, 1450, 1651, 1655 |
| BsmAI | GTCTC | 2 cut(s) | 962, 1102 |
| BsmFI | GGGAC | 2 cut(s) | 832, 1088 |
| BsnI | GGCC | 7 cut(s) | 628, 671, 735, 836, 863, 980, 1639 |
| Bso31I | GGTCTC | 1 cut(s) | 962 |
| BsoBI | CYCGRG | 3 cut(s) | 648, 1079, 1443 |
| Bsp120I | GGGCCC | 1 cut(s) | 669 |
| Bsp1286I | GDGCHC | 5 cut(s) | 673, 888, 1422, 1459, 1598 |
| Bsp143I | GATC | 5 cut(s) | 280, 427, 1132, 1164, 1610 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 411 |
| Bsp19I | CCATGG | 1 cut(s) | 1581 |
| BspANI | GGCC | 7 cut(s) | 628, 671, 735, 836, 863, 980, 1639 |
| BspCNI | CTCAG | 6 cut(s) | 424, 754, 1231, 1441, 1475, 1672 |
| BspFNI | CGCG | 5 cut(s) | 127, 297, 333, 338, 1424 |
| BspMAI | CTGCAG | 1 cut(s) | 1336 |
| BspMI | ACCTGC | 2 cut(s) | 83, 700 |
| BspOI | GCTAGC | 1 cut(s) | 407 |
| BspPI | GGATC | 4 cut(s) | 422, 1140, 1159, 1618 |
| BspT107I | GGYRCC | 6 cut(s) | 4, 500, 562, 641, 1454, 1577 |
| BspTNI | GGTCTC | 1 cut(s) | 962 |
| BsrBI | CCGCTC | 5 cut(s) | 717, 1006, 1072, 1084, 1461 |
| BsrI | ACTGG | 4 cut(s) | 451, 464, 1379, 1490 |
| BssECI | CCNNGG | 6 cut(s) | 31, 77, 125, 544, 1017, 1581 |
| BssMI | GATC | 5 cut(s) | 280, 427, 1132, 1164, 1610 |
| BssNAI | GTATAC | 1 cut(s) | 65 |
| BssNI | GRCGYC | 2 cut(s) | 501, 1589 |
| BssT1I | CCWWGG | 3 cut(s) | 77, 544, 1581 |
| Bst1107I | GTATAC | 1 cut(s) | 65 |
| Bst2UI | CCWGG | 3 cut(s) | 1019, 1399, 1608 |
| Bst4CI | ACNGT | 6 cut(s) | 32, 288, 424, 682, 688, 823 |
| Bst6I | CTCTTC | 3 cut(s) | 186, 650, 1656 |
| BstACI | GRCGYC | 2 cut(s) | 501, 1589 |
| BstBAI | YACGTR | 1 cut(s) | 68 |
| BstDEI | CTNAG | 9 cut(s) | 411, 570, 762, 1146, 1188, 1239, 1449, 1462, 1680 |
| BstDSI | CCRYGG | 3 cut(s) | 31, 125, 1581 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1127, 1172 |
| BstF5I | GGATG | 4 cut(s) | 136, 820, 1045, 1579 |
| BstFNI | CGCG | 5 cut(s) | 127, 297, 333, 338, 1424 |
| BstH2I | RGCGCY | 2 cut(s) | 77, 504 |
| BstHHI | GCGC | 4 cut(s) | 76, 299, 362, 503 |
| BstKTI | GATC | 5 cut(s) | 283, 430, 1135, 1167, 1613 |
| BstMAI | GTCTC | 2 cut(s) | 962, 1102 |
| BstMBI | GATC | 5 cut(s) | 280, 427, 1132, 1164, 1610 |
| BstMCI | CGRYCG | 2 cut(s) | 426, 837 |
| BstNI | CCWGG | 3 cut(s) | 1019, 1399, 1608 |
| BstNSI | RCATGY | 2 cut(s) | 1097, 1351 |
| BstPAI | GACNNNNGTC | 3 cut(s) | 249, 422, 836 |
| BstSCI | CCNGG | 3 cut(s) | 1017, 1397, 1606 |
| BstSFI | CTRYAG | 1 cut(s) | 1332 |
| BstSLI | GKGCMC | 2 cut(s) | 673, 1459 |
| BstSNI | TACGTA | 1 cut(s) | 68 |
| BstUI | CGCG | 5 cut(s) | 127, 297, 333, 338, 1424 |
| BstV1I | GCAGC | 9 cut(s) | 31, 258, 631, 679, 1171, 1318, 1346, 1543, 1638 |
| BstV2I | GAAGAC | 1 cut(s) | 245 |
| BstX2I | RGATCY | 2 cut(s) | 1164, 1610 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 352, 1574 |
| BstYI | RGATCY | 2 cut(s) | 1164, 1610 |
| BstZ17I | GTATAC | 1 cut(s) | 65 |
| BstZI | CGGCCG | 1 cut(s) | 834 |
| BsuRI | GGCC | 7 cut(s) | 628, 671, 735, 836, 863, 980, 1639 |
| BtgI | CCRYGG | 3 cut(s) | 31, 125, 1581 |
| BtgZI | GCGATG | 1 cut(s) | 1049 |
| BtsCI | GGATG | 4 cut(s) | 136, 820, 1045, 1579 |
| BtsI | GCAGTG | 2 cut(s) | 92, 1435 |
| BtsIMutI | CAGTG | 5 cut(s) | 92, 471, 885, 1435, 1497 |
| BveI | ACCTGC | 2 cut(s) | 83, 700 |
| CfoI | GCGC | 4 cut(s) | 76, 299, 362, 503 |
| Cfr13I | GGNCC | 6 cut(s) | 24, 669, 670, 819, 1075, 1637 |
| Cfr42I | CCGCGG | 1 cut(s) | 128 |
| CseI | GACGC | 3 cut(s) | 344, 815, 1597 |
| Csp6I | GTAC | 4 cut(s) | 537, 563, 642, 1294 |
| CviAII | CATG | 6 cut(s) | 890, 1094, 1306, 1348, 1552, 1582 |
| CviQI | GTAC | 4 cut(s) | 537, 563, 642, 1294 |
| DdeI | CTNAG | 9 cut(s) | 411, 570, 762, 1146, 1188, 1239, 1449, 1462, 1680 |
| DinI | GGCGCC | 1 cut(s) | 502 |
| DpnI | GATC | 5 cut(s) | 282, 429, 1134, 1166, 1612 |
| DpnII | GATC | 5 cut(s) | 280, 427, 1132, 1164, 1610 |
| DriI | GACNNNNNGTC | 2 cut(s) | 511, 825 |
| EaeI | YGGCCR | 2 cut(s) | 733, 834 |
| EagI | CGGCCG | 1 cut(s) | 834 |
| Eam1104I | CTCTTC | 3 cut(s) | 186, 650, 1656 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 511, 825 |
| EarI | CTCTTC | 3 cut(s) | 186, 650, 1656 |
| EciI | GGCGGA | 3 cut(s) | 51, 1010, 1037 |
| EclXI | CGGCCG | 1 cut(s) | 834 |
| Eco105I | TACGTA | 1 cut(s) | 68 |
| Eco130I | CCWWGG | 3 cut(s) | 77, 544, 1581 |
| Eco147I | AGGCCT | 1 cut(s) | 628 |
| Eco24I | GRGCYC | 4 cut(s) | 673, 888, 1422, 1598 |
| Eco31I | GGTCTC | 1 cut(s) | 962 |
| Eco47I | GGWCC | 3 cut(s) | 24, 819, 1075 |
| Eco52I | CGGCCG | 1 cut(s) | 834 |
| Eco57I | CTGAAG | 7 cut(s) | 156, 838, 959, 1148, 1154, 1218, 1373 |
| Eco88I | CYCGRG | 3 cut(s) | 648, 1079, 1443 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1127, 1172 |
| EcoO109I | RGGNCCY | 3 cut(s) | 669, 670, 1075 |
| EcoRII | CCWGG | 3 cut(s) | 1017, 1397, 1606 |
| EcoT14I | CCWWGG | 3 cut(s) | 77, 544, 1581 |
| EcoT38I | GRGCYC | 4 cut(s) | 673, 888, 1422, 1598 |
| EgeI | GGCGCC | 1 cut(s) | 502 |
| EheI | GGCGCC | 1 cut(s) | 502 |
| ErhI | CCWWGG | 3 cut(s) | 77, 544, 1581 |
| FaeI | CATG | 6 cut(s) | 893, 1097, 1309, 1351, 1555, 1585 |
| FaqI | GGGAC | 2 cut(s) | 832, 1088 |
| FatI | CATG | 6 cut(s) | 889, 1093, 1305, 1347, 1551, 1581 |
| FauI | CCCGC | 8 cut(s) | 120, 138, 520, 681, 1065, 1402, 1429, 1466 |
| FblI | GTMKAC | 1 cut(s) | 64 |
| FokI | GGATG | 4 cut(s) | 143, 827, 1052, 1586 |
| FriOI | GRGCYC | 4 cut(s) | 673, 888, 1422, 1598 |
| FspBI | CTAG | 6 cut(s) | 380, 404, 578, 722, 1106, 1631 |
| FspI | TGCGCA | 1 cut(s) | 361 |
| GlaI | GCGC | 4 cut(s) | 75, 298, 361, 502 |
| GsaI | CCCAGC | 2 cut(s) | 402, 1638 |
| GsuI | CTGGAG | 5 cut(s) | 788, 1232, 1436, 1590, 1673 |
| HaeII | RGCGCY | 2 cut(s) | 77, 504 |
| HaeIII | GGCC | 7 cut(s) | 628, 671, 735, 836, 863, 980, 1639 |
| HapII | CCGG | 1 cut(s) | 13 |
| HgaI | GACGC | 3 cut(s) | 344, 815, 1597 |
| HhaI | GCGC | 4 cut(s) | 76, 299, 362, 503 |
| Hin1I | GRCGYC | 2 cut(s) | 501, 1589 |
| Hin1II | CATG | 6 cut(s) | 893, 1097, 1309, 1351, 1555, 1585 |
| Hin6I | GCGC | 4 cut(s) | 74, 297, 360, 501 |
| HinP1I | GCGC | 4 cut(s) | 74, 297, 360, 501 |
| HincII | GTYRAC | 1 cut(s) | 291 |
| HindII | GTYRAC | 1 cut(s) | 291 |
| HinfI | GANTC | 7 cut(s) | 229, 292, 305, 725, 758, 1178, 1499 |
| HpaII | CCGG | 1 cut(s) | 13 |
| HphI | GGTGA | 8 cut(s) | 107, 250, 694, 724, 1390, 1493, 1597, 1670 |
| Hpy166II | GTNNAC | 4 cut(s) | 65, 98, 291, 1495 |
| Hpy188I | TCNGA | 9 cut(s) | 186, 316, 457, 753, 763, 831, 1390, 1531, 1620 |
| Hpy188III | TCNNGA | 7 cut(s) | 174, 380, 722, 1136, 1204, 1232, 1679 |
| Hpy8I | GTNNAC | 4 cut(s) | 65, 98, 291, 1495 |
| Hpy99I | CGWCG | 6 cut(s) | 112, 316, 338, 424, 682, 835 |
| HpyAV | CCTTC | 9 cut(s) | 180, 181, 862, 874, 934, 1123, 1178, 1315, 1354 |
| HpyCH4III | ACNGT | 6 cut(s) | 32, 288, 424, 682, 688, 823 |
| HpyCH4IV | ACGT | 2 cut(s) | 67, 999 |
| HpyCH4V | TGCA | 8 cut(s) | 47, 85, 590, 610, 709, 973, 1334, 1514 |
| HpyF3I | CTNAG | 9 cut(s) | 411, 570, 762, 1146, 1188, 1239, 1449, 1462, 1680 |
| HpySE526I | ACGT | 2 cut(s) | 67, 999 |
| Hsp92I | GRCGYC | 2 cut(s) | 501, 1589 |
| Hsp92II | CATG | 6 cut(s) | 893, 1097, 1309, 1351, 1555, 1585 |
| HspAI | GCGC | 4 cut(s) | 74, 297, 360, 501 |
| KasI | GGCGCC | 1 cut(s) | 500 |
| KpnI | GGTACC | 2 cut(s) | 566, 645 |
| KspI | CCGCGG | 1 cut(s) | 128 |
| Kzo9I | GATC | 5 cut(s) | 280, 427, 1132, 1164, 1610 |
| LmnI | GCTCC | 7 cut(s) | 162, 268, 530, 598, 891, 1417, 1609 |
| Lsp1109I | GCAGC | 9 cut(s) | 31, 258, 631, 679, 1171, 1318, 1346, 1543, 1638 |
| LweI | GCATC | 5 cut(s) | 468, 493, 1030, 1377, 1394 |
| MaeI | CTAG | 6 cut(s) | 380, 404, 578, 722, 1106, 1631 |
| MaeII | ACGT | 2 cut(s) | 67, 999 |
| MaeIII | GTNAC | 6 cut(s) | 233, 513, 580, 682, 909, 1585 |
| MalI | GATC | 5 cut(s) | 282, 429, 1134, 1166, 1612 |
| MbiI | CCGCTC | 5 cut(s) | 717, 1006, 1072, 1084, 1461 |
| MboI | GATC | 5 cut(s) | 280, 427, 1132, 1164, 1610 |
| MboII | GAAGA | 5 cut(s) | 203, 245, 300, 667, 1673 |
| MfeI | CAATTG | 1 cut(s) | 845 |
| MflI | RGATCY | 2 cut(s) | 1164, 1610 |
| MhlI | GDGCHC | 5 cut(s) | 673, 888, 1422, 1459, 1598 |
| MluCI | AATT | 6 cut(s) | 57, 845, 1283, 1339, 1561, 1684 |
| MluI | ACGCGT | 1 cut(s) | 336 |
| Mly113I | GGCGCC | 1 cut(s) | 501 |
| MlyI | GAGTC | 3 cut(s) | 286, 719, 752 |
| MmeI | TCCRAC | 5 cut(s) | 51, 294, 576, 854, 865 |
| MseI | TTAA | 3 cut(s) | 179, 369, 1278 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1583 |
| MspA1I | CMGCKG | 7 cut(s) | 127, 398, 638, 1196, 1265, 1414, 1651 |
| MspI | CCGG | 1 cut(s) | 13 |
| MspR9I | CCNGG | 3 cut(s) | 1019, 1399, 1608 |
| MunI | CAATTG | 1 cut(s) | 845 |
| MvaI | CCWGG | 3 cut(s) | 1019, 1399, 1608 |
| MvnI | CGCG | 5 cut(s) | 127, 297, 333, 338, 1424 |
| NarI | GGCGCC | 1 cut(s) | 501 |
| NcoI | CCATGG | 1 cut(s) | 1581 |
| NdeII | GATC | 5 cut(s) | 280, 427, 1132, 1164, 1610 |
| NheI | GCTAGC | 1 cut(s) | 403 |
| NlaIII | CATG | 6 cut(s) | 893, 1097, 1309, 1351, 1555, 1585 |
| NmeAIII | GCCGAG | 2 cut(s) | 477, 1617 |
| NmuCI | GTSAC | 5 cut(s) | 513, 580, 682, 909, 1585 |
| NsbI | TGCGCA | 1 cut(s) | 361 |
| NspI | RCATGY | 2 cut(s) | 1097, 1351 |
| OliI | CACNNNNGTG | 1 cut(s) | 1583 |
| PaeR7I | CTCGAG | 1 cut(s) | 1079 |
| PaqCI | CACCTGC | 2 cut(s) | 83, 700 |
| PceI | AGGCCT | 1 cut(s) | 628 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1086 |
| PfeI | GAWTC | 4 cut(s) | 229, 305, 1178, 1499 |
| PflFI | GACNNNGTC | 1 cut(s) | 1118 |
| PfoI | TCCNGGA | 1 cut(s) | 1606 |
| PleI | GAGTC | 3 cut(s) | 286, 719, 752 |
| PluTI | GGCGCC | 1 cut(s) | 504 |
| PpsI | GAGTC | 3 cut(s) | 286, 719, 752 |
| Ppu21I | YACGTR | 1 cut(s) | 68 |
| PpuMI | RGGWCCY | 1 cut(s) | 1075 |
| PshAI | GACNNNNGTC | 3 cut(s) | 249, 422, 836 |
| PshBI | ATTAAT | 1 cut(s) | 369 |
| Psp5II | RGGWCCY | 1 cut(s) | 1075 |
| Psp6I | CCWGG | 3 cut(s) | 1017, 1397, 1606 |
| PspFI | CCCAGC | 2 cut(s) | 398, 1634 |
| PspGI | CCWGG | 3 cut(s) | 1017, 1397, 1606 |
| PspOMI | GGGCCC | 1 cut(s) | 669 |
| PspPI | GGNCC | 6 cut(s) | 24, 669, 670, 819, 1075, 1637 |
| PspPPI | RGGWCCY | 1 cut(s) | 1075 |
| PspXI | VCTCGAGB | 1 cut(s) | 1079 |
| PstI | CTGCAG | 1 cut(s) | 1336 |
| PsuI | RGATCY | 2 cut(s) | 1164, 1610 |
| PsyI | GACNNNGTC | 1 cut(s) | 1118 |
| PvuII | CAGCTG | 1 cut(s) | 1414 |
| RsaI | GTAC | 4 cut(s) | 538, 564, 643, 1295 |
| RsaNI | GTAC | 4 cut(s) | 537, 563, 642, 1294 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1583 |
| SacII | CCGCGG | 1 cut(s) | 128 |
| SaqAI | TTAA | 3 cut(s) | 179, 369, 1278 |
| Sau3AI | GATC | 5 cut(s) | 280, 427, 1132, 1164, 1610 |
| Sau96I | GGNCC | 6 cut(s) | 24, 669, 670, 819, 1075, 1637 |
| SchI | GAGTC | 3 cut(s) | 286, 719, 752 |
| ScrFI | CCNGG | 3 cut(s) | 1019, 1399, 1608 |
| SduI | GDGCHC | 5 cut(s) | 673, 888, 1422, 1459, 1598 |
| SfaNI | GCATC | 5 cut(s) | 468, 493, 1030, 1377, 1394 |
| SfcI | CTRYAG | 1 cut(s) | 1332 |
| SfoI | GGCGCC | 1 cut(s) | 502 |
| Sfr274I | CTCGAG | 1 cut(s) | 1079 |
| Sfr303I | CCGCGG | 1 cut(s) | 128 |
| SgrBI | CCGCGG | 1 cut(s) | 128 |
| SinI | GGWCC | 3 cut(s) | 24, 819, 1075 |
| SlaI | CTCGAG | 1 cut(s) | 1079 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1583 |
| SmlI | CTYRAG | 2 cut(s) | 101, 1079 |
| SmoI | CTYRAG | 2 cut(s) | 101, 1079 |
| SnaBI | TACGTA | 1 cut(s) | 68 |
| SpeI | ACTAGT | 1 cut(s) | 577 |
| Sse9I | AATT | 6 cut(s) | 57, 845, 1283, 1339, 1561, 1684 |
| SseBI | AGGCCT | 1 cut(s) | 628 |
| SspDI | GGCGCC | 1 cut(s) | 500 |
| SspMI | CTAG | 6 cut(s) | 380, 404, 578, 722, 1106, 1631 |
| StuI | AGGCCT | 1 cut(s) | 628 |
| StyD4I | CCNGG | 3 cut(s) | 1017, 1397, 1606 |
| StyI | CCWWGG | 3 cut(s) | 77, 544, 1581 |
| TaaI | ACNGT | 6 cut(s) | 32, 288, 424, 682, 688, 823 |
| TaiI | ACGT | 2 cut(s) | 70, 1002 |
| TaqI | TCGA | 8 cut(s) | 151, 243, 279, 426, 476, 744, 1080, 1371 |
| TaqII | GACCGA | 1 cut(s) | 770 |
| TasI | AATT | 6 cut(s) | 57, 845, 1283, 1339, 1561, 1684 |
| TatI | WGTACW | 1 cut(s) | 1293 |
| TauI | GCSGC | 9 cut(s) | 333, 398, 410, 484, 638, 1009, 1050, 1265, 1319 |
| TfiI | GAWTC | 4 cut(s) | 229, 305, 1178, 1499 |
| Tru1I | TTAA | 3 cut(s) | 179, 369, 1278 |
| Tru9I | TTAA | 3 cut(s) | 179, 369, 1278 |
| TscAI | CASTG | 5 cut(s) | 92, 471, 885, 1435, 1497 |
| TseFI | GTSAC | 5 cut(s) | 513, 580, 682, 909, 1585 |
| TseI | GCWGC | 9 cut(s) | 44, 271, 619, 692, 1184, 1331, 1334, 1556, 1626 |
| Tsp45I | GTSAC | 5 cut(s) | 513, 580, 682, 909, 1585 |
| TspDTI | ATGAA | 1 cut(s) | 1540 |
| TspGWI | ACGGA | 2 cut(s) | 239, 1054 |
| TspRI | CASTG | 5 cut(s) | 92, 471, 885, 1435, 1497 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1118 |
| VpaK11BI | GGWCC | 3 cut(s) | 24, 819, 1075 |
| VspI | ATTAAT | 1 cut(s) | 369 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1127, 1172 |
| XbaI | TCTAGA | 2 cut(s) | 379, 721 |
| XceI | RCATGY | 2 cut(s) | 1097, 1351 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 84, 988 |
| XhoI | CTCGAG | 1 cut(s) | 1079 |
| XmiI | GTMKAC | 1 cut(s) | 64 |
| XspI | CTAG | 6 cut(s) | 380, 404, 578, 722, 1106, 1631 |