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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 2989, 3100 |
| AatII | GACGTC | 1 cut(s) | 702 |
| Acc36I | ACCTGC | 1 cut(s) | 2071 |
| AccB1I | GGYRCC | 6 cut(s) | 1166, 1250, 2191, 2852, 2945, 3068 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 990, 1268, 1315 |
| AccBSI | CCGCTC | 7 cut(s) | 98, 1936, 2254, 2494, 2560, 2623, 2952 |
| AccI | GTMKAC | 3 cut(s) | 291, 1176, 1548 |
| AccIII | TCCGGA | 1 cut(s) | 120 |
| AclWI | GGATC | 1 cut(s) | 1593 |
| AcoI | YGGCCR | 5 cut(s) | 1890, 2502, 2550, 2745, 2895 |
| AcsI | RAATTY | 1 cut(s) | 1278 |
| AcuI | CTGAAG | 4 cut(s) | 753, 2326, 2748, 2861 |
| AcyI | GRCGYC | 5 cut(s) | 699, 2192, 2396, 2529, 2853 |
| AfaI | GTAC | 4 cut(s) | 5, 1410, 1742, 2737 |
| AflIII | ACRYGT | 3 cut(s) | 894, 1312, 2581 |
| AgsI | TTSAA | 6 cut(s) | 68, 134, 331, 1694, 2759, 2767 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1496 |
| AjiI | CACGTC | 3 cut(s) | 295, 895, 2116 |
| AjnI | CCWGG | 5 cut(s) | 298, 1267, 2409, 2565, 3042 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 689, 721 |
| Alw21I | GWGCWC | 3 cut(s) | 810, 1031, 2427 |
| Alw44I | GTGCAC | 1 cut(s) | 806 |
| AlwI | GGATC | 1 cut(s) | 1593 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2410 |
| Ama87I | CYCGRG | 3 cut(s) | 231, 1781, 3057 |
| Aor13HI | TCCGGA | 1 cut(s) | 120 |
| ApaI | GGGCCC | 2 cut(s) | 1885, 2821 |
| ApaLI | GTGCAC | 1 cut(s) | 806 |
| ApoI | RAATTY | 1 cut(s) | 1278 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1387 |
| AsuC2I | CCSGG | 4 cut(s) | 770, 886, 1160, 1358 |
| AvaI | CYCGRG | 3 cut(s) | 231, 1781, 3057 |
| AvaII | GGWCC | 7 cut(s) | 1013, 1513, 1705, 2037, 2563, 2991, 3102 |
| AxyI | CCTNAGG | 1 cut(s) | 2720 |
| BaeGI | GKGCMC | 4 cut(s) | 810, 1885, 2821, 2950 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 799, 832 |
| BalI | TGGCCA | 2 cut(s) | 2504, 2552 |
| BanI | GGYRCC | 6 cut(s) | 1166, 1250, 2191, 2852, 2945, 3068 |
| BanII | GRGCYC | 4 cut(s) | 1031, 1885, 2427, 2821 |
| BbsI | GAAGAC | 2 cut(s) | 393, 1772 |
| Bbv12I | GWGCWC | 3 cut(s) | 810, 1031, 2427 |
| BceAI | ACGGC | 6 cut(s) | 226, 1157, 1438, 2297, 2337, 2395 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1156, 1190 |
| BciT130I | CCWGG | 5 cut(s) | 300, 1269, 2411, 2567, 3044 |
| BciVI | GTATCC | 1 cut(s) | 2915 |
| BcnI | CCSGG | 4 cut(s) | 770, 886, 1160, 1358 |
| BfaI | CTAG | 8 cut(s) | 84, 410, 1032, 1062, 2285, 2300, 2699, 3084 |
| BfmI | CTRYAG | 2 cut(s) | 977, 2615 |
| BfoI | RGCGCY | 7 cut(s) | 1421, 1467, 1796, 2063, 2195, 2698, 2856 |
| BfuAI | ACCTGC | 1 cut(s) | 2071 |
| BfuI | GTATCC | 1 cut(s) | 2915 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1533, 1889 |
| BlpI | GCTNAGC | 5 cut(s) | 440, 501, 560, 621, 1796 |
| BmcAI | AGTACT | 1 cut(s) | 2737 |
| Bme1390I | CCNGG | 9 cut(s) | 300, 770, 886, 1160, 1269, 1358, 2411, 2567, 3044 |
| Bme18I | GGWCC | 7 cut(s) | 1013, 1513, 1705, 2037, 2563, 2991, 3102 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1496 |
| BmeT110I | CYCGRG | 3 cut(s) | 231, 1781, 3057 |
| BmgBI | CACGTC | 3 cut(s) | 295, 895, 2116 |
| BmrFI | CCNGG | 9 cut(s) | 300, 770, 886, 1160, 1269, 1358, 2411, 2567, 3044 |
| BmrI | ACTGGG | 2 cut(s) | 17, 1119 |
| BmsI | GCATC | 2 cut(s) | 1929, 3142 |
| BmuI | ACTGGG | 2 cut(s) | 17, 1119 |
| BpiI | GAAGAC | 2 cut(s) | 393, 1772 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2198, 2230 |
| BpmI | CTGGAG | 5 cut(s) | 1751, 2076, 2084, 2432, 2588 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1446, 2426, 2953 |
| Bpu1102I | GCTNAGC | 5 cut(s) | 440, 501, 560, 621, 1796 |
| BpuMI | CCSGG | 4 cut(s) | 770, 886, 1160, 1358 |
| BsaAI | YACGTR | 1 cut(s) | 1412 |
| BsaHI | GRCGYC | 5 cut(s) | 699, 2192, 2396, 2529, 2853 |
| BsaI | GGTCTC | 3 cut(s) | 1727, 2450, 3071 |
| BsaWI | WCCGGW | 4 cut(s) | 120, 286, 1813, 1984 |
| Bse118I | RCCGGY | 3 cut(s) | 1892, 2045, 2893 |
| Bse1I | ACTGG | 5 cut(s) | 23, 1114, 1509, 1654, 2484 |
| Bse21I | CCTNAGG | 1 cut(s) | 2720 |
| Bse3DI | GCAATG | 3 cut(s) | 1339, 1707, 1998 |
| BseAI | TCCGGA | 1 cut(s) | 120 |
| BseBI | CCWGG | 5 cut(s) | 300, 1269, 2411, 2567, 3044 |
| BseGI | GGATG | 9 cut(s) | 129, 852, 1168, 1200, 1861, 1944, 2107, 2977, 3070 |
| BseMI | GCAATG | 3 cut(s) | 1339, 1707, 1998 |
| BseNI | ACTGG | 5 cut(s) | 23, 1114, 1509, 1654, 2484 |
| BseRI | GAGGAG | 3 cut(s) | 1581, 2003, 2027 |
| BseSI | GKGCMC | 4 cut(s) | 810, 1885, 2821, 2950 |
| BseX3I | CGGCCG | 1 cut(s) | 2745 |
| BseYI | CCCAGC | 3 cut(s) | 1919, 2813, 2994 |
| BsgI | GTGCAG | 4 cut(s) | 140, 1892, 2360, 2678 |
| Bsh1285I | CGRYCG | 4 cut(s) | 208, 785, 2748, 3126 |
| BshNI | GGYRCC | 6 cut(s) | 1166, 1250, 2191, 2852, 2945, 3068 |
| BsiEI | CGRYCG | 4 cut(s) | 208, 785, 2748, 3126 |
| BsiHKAI | GWGCWC | 3 cut(s) | 810, 1031, 2427 |
| BsiHKCI | CYCGRG | 3 cut(s) | 231, 1781, 3057 |
| BslFI | GGGAC | 9 cut(s) | 4, 88, 191, 1503, 1526, 1552, 2385, 2576, 2977 |
| BsmBI | CGTCTC | 1 cut(s) | 1778 |
| BsmFI | GGGAC | 9 cut(s) | 4, 88, 191, 1503, 1526, 1552, 2385, 2576, 2977 |
| BsmI | GAATGC | 2 cut(s) | 1141, 2762 |
| Bso31I | GGTCTC | 3 cut(s) | 1727, 2450, 3071 |
| BsoBI | CYCGRG | 3 cut(s) | 231, 1781, 3057 |
| Bsp120I | GGGCCC | 2 cut(s) | 1881, 2817 |
| Bsp1286I | GDGCHC | 6 cut(s) | 810, 1031, 1885, 2427, 2821, 2950 |
| Bsp13I | TCCGGA | 1 cut(s) | 120 |
| Bsp1407I | TGTACA | 1 cut(s) | 3 |
| Bsp143I | GATC | 6 cut(s) | 782, 1474, 1585, 2124, 3106, 3123 |
| Bsp1720I | GCTNAGC | 5 cut(s) | 440, 501, 560, 621, 1796 |
| Bsp68I | TCGCGA | 1 cut(s) | 1683 |
| BspEI | TCCGGA | 1 cut(s) | 120 |
| BspHI | TCATGA | 1 cut(s) | 2238 |
| BspMAI | CTGCAG | 1 cut(s) | 2619 |
| BspMI | ACCTGC | 1 cut(s) | 2071 |
| BspPI | GGATC | 1 cut(s) | 1593 |
| BspT107I | GGYRCC | 6 cut(s) | 1166, 1250, 2191, 2852, 2945, 3068 |
| BspTNI | GGTCTC | 3 cut(s) | 1727, 2450, 3071 |
| BsrBI | CCGCTC | 7 cut(s) | 98, 1936, 2254, 2494, 2560, 2623, 2952 |
| BsrDI | GCAATG | 3 cut(s) | 1339, 1707, 1998 |
| BsrFI | RCCGGY | 3 cut(s) | 1892, 2045, 2893 |
| BsrGI | TGTACA | 1 cut(s) | 3 |
| BsrI | ACTGG | 5 cut(s) | 23, 1114, 1509, 1654, 2484 |
| BssAI | RCCGGY | 3 cut(s) | 1892, 2045, 2893 |
| BssMI | GATC | 6 cut(s) | 782, 1474, 1585, 2124, 3106, 3123 |
| BssNAI | GTATAC | 1 cut(s) | 1549 |
| BssNI | GRCGYC | 5 cut(s) | 699, 2192, 2396, 2529, 2853 |
| BssT1I | CCWWGG | 5 cut(s) | 989, 2006, 2440, 2505, 2634 |
| Bst1107I | GTATAC | 1 cut(s) | 1549 |
| Bst2UI | CCWGG | 5 cut(s) | 300, 1269, 2411, 2567, 3044 |
| Bst4CI | ACNGT | 8 cut(s) | 182, 190, 765, 805, 1345, 1376, 1996, 2173 |
| Bst6I | CTCTTC | 1 cut(s) | 2270 |
| BstACI | GRCGYC | 5 cut(s) | 699, 2192, 2396, 2529, 2853 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3152 |
| BstAUI | TGTACA | 1 cut(s) | 3 |
| BstBAI | YACGTR | 1 cut(s) | 1412 |
| BstDSI | CCRYGG | 3 cut(s) | 2319, 2533, 2742 |
| BstEII | GGTNACC | 2 cut(s) | 2048, 2710 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2414 |
| BstF5I | GGATG | 9 cut(s) | 129, 852, 1168, 1200, 1861, 1944, 2107, 2977, 3070 |
| BstH2I | RGCGCY | 7 cut(s) | 1421, 1467, 1796, 2063, 2195, 2698, 2856 |
| BstKTI | GATC | 6 cut(s) | 785, 1477, 1588, 2127, 3109, 3126 |
| BstMBI | GATC | 6 cut(s) | 782, 1474, 1585, 2124, 3106, 3123 |
| BstMCI | CGRYCG | 4 cut(s) | 208, 785, 2748, 3126 |
| BstNI | CCWGG | 5 cut(s) | 300, 1269, 2411, 2567, 3044 |
| BstNSI | RCATGY | 4 cut(s) | 1316, 2386, 2585, 2839 |
| BstPI | GGTNACC | 2 cut(s) | 2048, 2710 |
| BstSCI | CCNGG | 9 cut(s) | 298, 768, 884, 1158, 1267, 1356, 2409, 2565, 3042 |
| BstSFI | CTRYAG | 2 cut(s) | 977, 2615 |
| BstSLI | GKGCMC | 4 cut(s) | 810, 1885, 2821, 2950 |
| BstV2I | GAAGAC | 2 cut(s) | 393, 1772 |
| BstZ17I | GTATAC | 1 cut(s) | 1549 |
| BstZI | CGGCCG | 1 cut(s) | 2745 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2720 |
| BsuI | GTATCC | 1 cut(s) | 2915 |
| BtgI | CCRYGG | 3 cut(s) | 2319, 2533, 2742 |
| BtgZI | GCGATG | 1 cut(s) | 2807 |
| BtrI | CACGTC | 3 cut(s) | 295, 895, 2116 |
| BtsCI | GGATG | 9 cut(s) | 129, 852, 1168, 1200, 1861, 1944, 2107, 2977, 3070 |
| BtsI | GCAGTG | 3 cut(s) | 880, 962, 1047 |
| BtsIMutI | CAGTG | 5 cut(s) | 880, 962, 1047, 1107, 1341 |
| BtuMI | TCGCGA | 1 cut(s) | 1683 |
| BveI | ACCTGC | 1 cut(s) | 2071 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2410 |
| CciI | TCATGA | 1 cut(s) | 2238 |
| CciNI | GCGGCCGC | 1 cut(s) | 2745 |
| Cfr10I | RCCGGY | 3 cut(s) | 1892, 2045, 2893 |
| Cfr42I | CCGCGG | 2 cut(s) | 2536, 2745 |
| Csp6I | GTAC | 4 cut(s) | 4, 1409, 1741, 2736 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1936, 1971, 2308, 2343 |
| CviAII | CATG | 7 cut(s) | 950, 1313, 1738, 2239, 2383, 2582, 2836 |
| CviQI | GTAC | 4 cut(s) | 4, 1409, 1741, 2736 |
| DinI | GGCGCC | 2 cut(s) | 2193, 2854 |
| DpnI | GATC | 6 cut(s) | 784, 1476, 1587, 2126, 3108, 3125 |
| DpnII | GATC | 6 cut(s) | 782, 1474, 1585, 2124, 3106, 3123 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 2989, 3100 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1496 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 2989, 3100 |
| EaeI | YGGCCR | 5 cut(s) | 1890, 2502, 2550, 2745, 2895 |
| EagI | CGGCCG | 1 cut(s) | 2745 |
| Eam1104I | CTCTTC | 1 cut(s) | 2270 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1496 |
| EarI | CTCTTC | 1 cut(s) | 2270 |
| EciI | GGCGGA | 9 cut(s) | 356, 926, 1395, 1616, 2477, 2498, 2525, 2792, 3077 |
| Ecl136II | GAGCTC | 2 cut(s) | 1029, 2425 |
| EclXI | CGGCCG | 1 cut(s) | 2745 |
| Eco130I | CCWWGG | 5 cut(s) | 989, 2006, 2440, 2505, 2634 |
| Eco24I | GRGCYC | 4 cut(s) | 1031, 1885, 2427, 2821 |
| Eco31I | GGTCTC | 3 cut(s) | 1727, 2450, 3071 |
| Eco32I | GATATC | 1 cut(s) | 254 |
| Eco47I | GGWCC | 7 cut(s) | 1013, 1513, 1705, 2037, 2563, 2991, 3102 |
| Eco52I | CGGCCG | 1 cut(s) | 2745 |
| Eco53kI | GAGCTC | 2 cut(s) | 1029, 2425 |
| Eco57I | CTGAAG | 4 cut(s) | 753, 2326, 2748, 2861 |
| Eco81I | CCTNAGG | 1 cut(s) | 2720 |
| Eco88I | CYCGRG | 3 cut(s) | 231, 1781, 3057 |
| Eco91I | GGTNACC | 2 cut(s) | 2048, 2710 |
| EcoICRI | GAGCTC | 2 cut(s) | 1029, 2425 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2414 |
| EcoO109I | RGGNCCY | 7 cut(s) | 1368, 1513, 1881, 2130, 2563, 2817, 2991 |
| EcoO65I | GGTNACC | 2 cut(s) | 2048, 2710 |
| EcoRII | CCWGG | 5 cut(s) | 298, 1267, 2409, 2565, 3042 |
| EcoRV | GATATC | 1 cut(s) | 254 |
| EcoT14I | CCWWGG | 5 cut(s) | 989, 2006, 2440, 2505, 2634 |
| EcoT38I | GRGCYC | 4 cut(s) | 1031, 1885, 2427, 2821 |
| EgeI | GGCGCC | 2 cut(s) | 2193, 2854 |
| EheI | GGCGCC | 2 cut(s) | 2193, 2854 |
| ErhI | CCWWGG | 5 cut(s) | 989, 2006, 2440, 2505, 2634 |
| Esp3I | CGTCTC | 1 cut(s) | 1778 |
| FaeI | CATG | 7 cut(s) | 953, 1316, 1741, 2242, 2386, 2585, 2839 |
| FaqI | GGGAC | 9 cut(s) | 4, 88, 191, 1503, 1526, 1552, 2385, 2576, 2977 |
| FatI | CATG | 7 cut(s) | 949, 1312, 1737, 2238, 2382, 2581, 2835 |
| FblI | GTMKAC | 3 cut(s) | 291, 1176, 1548 |
| FokI | GGATG | 9 cut(s) | 136, 859, 1175, 1207, 1868, 1951, 2114, 2964, 3077 |
| FriOI | GRGCYC | 4 cut(s) | 1031, 1885, 2427, 2821 |
| FspBI | CTAG | 8 cut(s) | 84, 410, 1032, 1062, 2285, 2300, 2699, 3084 |
| GsaI | CCCAGC | 3 cut(s) | 1923, 2817, 2998 |
| GsuI | CTGGAG | 5 cut(s) | 1751, 2076, 2084, 2432, 2588 |
| HaeII | RGCGCY | 7 cut(s) | 1421, 1467, 1796, 2063, 2195, 2698, 2856 |
| Hin1I | GRCGYC | 5 cut(s) | 699, 2192, 2396, 2529, 2853 |
| Hin1II | CATG | 7 cut(s) | 953, 1316, 1741, 2242, 2386, 2585, 2839 |
| HincII | GTYRAC | 2 cut(s) | 1177, 2086 |
| HindII | GTYRAC | 2 cut(s) | 1177, 2086 |
| Hpy166II | GTNNAC | 9 cut(s) | 292, 808, 1177, 1409, 1442, 1549, 1777, 2086, 2670 |
| Hpy188III | TCNNGA | 9 cut(s) | 121, 233, 1022, 1478, 1682, 1730, 2239, 2449, 3110 |
| Hpy8I | GTNNAC | 9 cut(s) | 292, 808, 1177, 1409, 1442, 1549, 1777, 2086, 2670 |
| HpyCH4III | ACNGT | 8 cut(s) | 182, 190, 765, 805, 1345, 1376, 1996, 2173 |
| HpyCH4IV | ACGT | 9 cut(s) | 294, 699, 855, 894, 1229, 1411, 2074, 2115, 2547 |
| HpySE526I | ACGT | 9 cut(s) | 294, 699, 855, 894, 1229, 1411, 2074, 2115, 2547 |
| Hsp92I | GRCGYC | 5 cut(s) | 699, 2192, 2396, 2529, 2853 |
| Hsp92II | CATG | 7 cut(s) | 953, 1316, 1741, 2242, 2386, 2585, 2839 |
| KasI | GGCGCC | 2 cut(s) | 2191, 2852 |
| KflI | GGGWCCC | 1 cut(s) | 2991 |
| Kpn2I | TCCGGA | 1 cut(s) | 120 |
| KroI | GCCGGC | 2 cut(s) | 1892, 2893 |
| KroNI | GCCGGC | 2 cut(s) | 1894, 2895 |
| KspI | CCGCGG | 2 cut(s) | 2536, 2745 |
| Kzo9I | GATC | 6 cut(s) | 782, 1474, 1585, 2124, 3106, 3123 |
| LweI | GCATC | 2 cut(s) | 1929, 3142 |
| MaeI | CTAG | 8 cut(s) | 84, 410, 1032, 1062, 2285, 2300, 2699, 3084 |
| MaeII | ACGT | 9 cut(s) | 294, 699, 855, 894, 1229, 1411, 2074, 2115, 2547 |
| MalI | GATC | 6 cut(s) | 784, 1476, 1587, 2126, 3108, 3125 |
| MbiI | CCGCTC | 7 cut(s) | 98, 1936, 2254, 2494, 2560, 2623, 2952 |
| MboI | GATC | 6 cut(s) | 782, 1474, 1585, 2124, 3106, 3123 |
| MfeI | CAATTG | 1 cut(s) | 2325 |
| MhlI | GDGCHC | 6 cut(s) | 810, 1031, 1885, 2427, 2821, 2950 |
| MlsI | TGGCCA | 2 cut(s) | 2504, 2552 |
| MluCI | AATT | 4 cut(s) | 134, 1278, 1610, 2325 |
| MluNI | TGGCCA | 2 cut(s) | 2504, 2552 |
| Mly113I | GGCGCC | 2 cut(s) | 2192, 2853 |
| MmeI | TCCRAC | 3 cut(s) | 1649, 3000, 3005 |
| Mox20I | TGGCCA | 2 cut(s) | 2504, 2552 |
| MroI | TCCGGA | 1 cut(s) | 120 |
| MroNI | GCCGGC | 2 cut(s) | 1892, 2893 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1387 |
| MscI | TGGCCA | 2 cut(s) | 2504, 2552 |
| MseI | TTAA | 1 cut(s) | 2784 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1217, 1848, 2387, 2654, 2834 |
| Msp20I | TGGCCA | 2 cut(s) | 2504, 2552 |
| MspR9I | CCNGG | 9 cut(s) | 300, 770, 886, 1160, 1269, 1358, 2411, 2567, 3044 |
| MunI | CAATTG | 1 cut(s) | 2325 |
| Mva1269I | GAATGC | 2 cut(s) | 1141, 2762 |
| MvaI | CCWGG | 5 cut(s) | 300, 1269, 2411, 2567, 3044 |
| NaeI | GCCGGC | 2 cut(s) | 1894, 2895 |
| NarI | GGCGCC | 2 cut(s) | 2192, 2853 |
| NciI | CCSGG | 4 cut(s) | 770, 886, 1160, 1358 |
| NdeII | GATC | 6 cut(s) | 782, 1474, 1585, 2124, 3106, 3123 |
| NgoMIV | GCCGGC | 2 cut(s) | 1892, 2893 |
| NlaIII | CATG | 7 cut(s) | 953, 1316, 1741, 2242, 2386, 2585, 2839 |
| NmeAIII | GCCGAG | 6 cut(s) | 1446, 1771, 2122, 2248, 2327, 2915 |
| NotI | GCGGCCGC | 1 cut(s) | 2745 |
| NruI | TCGCGA | 1 cut(s) | 1683 |
| NspI | RCATGY | 4 cut(s) | 1316, 2386, 2585, 2839 |
| PagI | TCATGA | 1 cut(s) | 2238 |
| PciI | ACATGT | 2 cut(s) | 1312, 2581 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 938, 1015, 2385, 2553 |
| PctI | GAATGC | 2 cut(s) | 1141, 2762 |
| PdiI | GCCGGC | 2 cut(s) | 1894, 2895 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1387 |
| PfeI | GAWTC | 5 cut(s) | 236, 881, 929, 1481, 3039 |
| PflFI | GACNNNGTC | 5 cut(s) | 452, 513, 572, 633, 2800 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 990, 1268, 1315 |
| PfoI | TCCNGGA | 2 cut(s) | 768, 1158 |
| Ple19I | CGATCG | 2 cut(s) | 785, 3126 |
| PluTI | GGCGCC | 2 cut(s) | 2195, 2856 |
| Ppu21I | YACGTR | 1 cut(s) | 1412 |
| PpuMI | RGGWCCY | 3 cut(s) | 1513, 2563, 2991 |
| PscI | ACATGT | 2 cut(s) | 1312, 2581 |
| Psp124BI | GAGCTC | 2 cut(s) | 1031, 2427 |
| Psp5II | RGGWCCY | 3 cut(s) | 1513, 2563, 2991 |
| Psp6I | CCWGG | 5 cut(s) | 298, 1267, 2409, 2565, 3042 |
| PspEI | GGTNACC | 2 cut(s) | 2048, 2710 |
| PspFI | CCCAGC | 3 cut(s) | 1919, 2813, 2994 |
| PspGI | CCWGG | 5 cut(s) | 298, 1267, 2409, 2565, 3042 |
| PspOMI | GGGCCC | 2 cut(s) | 1881, 2817 |
| PspPPI | RGGWCCY | 3 cut(s) | 1513, 2563, 2991 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2219, 2251 |
| PstI | CTGCAG | 1 cut(s) | 2619 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2410 |
| PsyI | GACNNNGTC | 5 cut(s) | 452, 513, 572, 633, 2800 |
| PvuI | CGATCG | 2 cut(s) | 785, 3126 |
| PvuII | CAGCTG | 1 cut(s) | 1919 |
| RruI | TCGCGA | 1 cut(s) | 1683 |
| RsaI | GTAC | 4 cut(s) | 5, 1410, 1742, 2737 |
| RsaNI | GTAC | 4 cut(s) | 4, 1409, 1741, 2736 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1217, 1848, 2387, 2654, 2834 |
| SacI | GAGCTC | 2 cut(s) | 1031, 2427 |
| SacII | CCGCGG | 2 cut(s) | 2536, 2745 |
| SalI | GTCGAC | 1 cut(s) | 1175 |
| SaqAI | TTAA | 1 cut(s) | 2784 |
| Sau3AI | GATC | 6 cut(s) | 782, 1474, 1585, 2124, 3106, 3123 |
| ScaI | AGTACT | 1 cut(s) | 2737 |
| ScrFI | CCNGG | 9 cut(s) | 300, 770, 886, 1160, 1269, 1358, 2411, 2567, 3044 |
| SduI | GDGCHC | 6 cut(s) | 810, 1031, 1885, 2427, 2821, 2950 |
| SfaNI | GCATC | 2 cut(s) | 1929, 3142 |
| SfcI | CTRYAG | 2 cut(s) | 977, 2615 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 1889 |
| SfoI | GGCGCC | 2 cut(s) | 2193, 2854 |
| Sfr303I | CCGCGG | 2 cut(s) | 2536, 2745 |
| SgrBI | CCGCGG | 2 cut(s) | 2536, 2745 |
| SgrDI | CGTCGACG | 1 cut(s) | 1175 |
| SinI | GGWCC | 7 cut(s) | 1013, 1513, 1705, 2037, 2563, 2991, 3102 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1217, 1848, 2387, 2654, 2834 |
| Sse9I | AATT | 4 cut(s) | 134, 1278, 1610, 2325 |
| SspDI | GGCGCC | 2 cut(s) | 2191, 2852 |
| SspMI | CTAG | 8 cut(s) | 84, 410, 1032, 1062, 2285, 2300, 2699, 3084 |
| SstI | GAGCTC | 2 cut(s) | 1031, 2427 |
| StyD4I | CCNGG | 9 cut(s) | 298, 768, 884, 1158, 1267, 1356, 2409, 2565, 3042 |
| StyI | CCWWGG | 5 cut(s) | 989, 2006, 2440, 2505, 2634 |
| TaaI | ACNGT | 8 cut(s) | 182, 190, 765, 805, 1345, 1376, 1996, 2173 |
| TaiI | ACGT | 9 cut(s) | 297, 702, 858, 897, 1232, 1414, 2077, 2118, 2550 |
| TaqII | GACCGA | 2 cut(s) | 1284, 2813 |
| TasI | AATT | 4 cut(s) | 134, 1278, 1610, 2325 |
| TatI | WGTACW | 2 cut(s) | 3, 2735 |
| TfiI | GAWTC | 5 cut(s) | 236, 881, 929, 1481, 3039 |
| Tru1I | TTAA | 1 cut(s) | 2784 |
| Tru9I | TTAA | 1 cut(s) | 2784 |
| TscAI | CASTG | 5 cut(s) | 880, 969, 1054, 1114, 1348 |
| TspDTI | ATGAA | 6 cut(s) | 369, 1211, 1235, 1350, 2227, 2592 |
| TspGWI | ACGGA | 7 cut(s) | 174, 930, 1207, 1223, 1664, 2151, 2999 |
| TspRI | CASTG | 5 cut(s) | 880, 969, 1054, 1114, 1348 |
| Tth111I | GACNNNGTC | 5 cut(s) | 452, 513, 572, 633, 2800 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 990, 1268, 1315 |
| VneI | GTGCAC | 1 cut(s) | 806 |
| VpaK11BI | GGWCC | 7 cut(s) | 1013, 1513, 1705, 2037, 2563, 2991, 3102 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2414 |
| XapI | RAATTY | 1 cut(s) | 1278 |
| XceI | RCATGY | 4 cut(s) | 1316, 2386, 2585, 2839 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1844 |
| XmiI | GTMKAC | 3 cut(s) | 291, 1176, 1548 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1387 |
| XspI | CTAG | 8 cut(s) | 84, 410, 1032, 1062, 2285, 2300, 2699, 3084 |
| ZraI | GACGTC | 1 cut(s) | 700 |
| ZrmI | AGTACT | 1 cut(s) | 2737 |