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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 391 |
| AccB1I | GGYRCC | 5 cut(s) | 164, 352, 997, 1036, 1742 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 417 |
| AccBSI | CCGCTC | 4 cut(s) | 73, 626, 1270, 1489 |
| AccI | GTMKAC | 2 cut(s) | 174, 1307 |
| AccII | CGCG | 3 cut(s) | 66, 1032, 1166 |
| AclWI | GGATC | 2 cut(s) | 5, 1576 |
| AcoI | YGGCCR | 2 cut(s) | 1557, 1671 |
| AcuI | CTGAAG | 5 cut(s) | 239, 347, 1154, 1315, 1571 |
| AcyI | GRCGYC | 2 cut(s) | 780, 1385 |
| AfaI | GTAC | 4 cut(s) | 489, 638, 836, 1302 |
| AflIII | ACRYGT | 1 cut(s) | 414 |
| AjiI | CACGTC | 1 cut(s) | 1171 |
| AjnI | CCWGG | 6 cut(s) | 156, 330, 522, 561, 1398, 1494 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1233, 1265 |
| AluBI | AGCT | 7 cut(s) | 586, 729, 794, 1090, 1287, 1652, 1751 |
| AluI | AGCT | 7 cut(s) | 586, 729, 794, 1090, 1287, 1652, 1751 |
| Alw21I | GWGCWC | 2 cut(s) | 315, 1056 |
| Alw26I | GTCTC | 4 cut(s) | 722, 821, 872, 1449 |
| Alw44I | GTGCAC | 1 cut(s) | 311 |
| AlwI | GGATC | 2 cut(s) | 5, 1576 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1399 |
| Ama87I | CYCGRG | 1 cut(s) | 1154 |
| AoxI | GGCC | 8 cut(s) | 42, 279, 1109, 1437, 1557, 1608, 1671, 1737 |
| ApaLI | GTGCAC | 1 cut(s) | 311 |
| ApeKI | GCWGC | 5 cut(s) | 50, 1090, 1284, 1363, 1765 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1087, 1119 |
| AspLEI | GCGC | 6 cut(s) | 66, 436, 522, 889, 983, 1032 |
| AspS9I | GGNCC | 7 cut(s) | 151, 470, 528, 570, 799, 975, 1492 |
| AsuC2I | CCSGG | 3 cut(s) | 127, 240, 1027 |
| AsuHPI | GGTGA | 7 cut(s) | 259, 880, 959, 1186, 1250, 1250, 1643 |
| AvaI | CYCGRG | 1 cut(s) | 1154 |
| AvaII | GGWCC | 7 cut(s) | 151, 470, 528, 570, 799, 975, 1492 |
| BaeGI | GKGCMC | 3 cut(s) | 315, 357, 1747 |
| BanI | GGYRCC | 5 cut(s) | 164, 352, 997, 1036, 1742 |
| BanII | GRGCYC | 1 cut(s) | 896 |
| BauI | CACGAG | 2 cut(s) | 314, 759 |
| BbsI | GAAGAC | 1 cut(s) | 866 |
| Bbv12I | GWGCWC | 2 cut(s) | 315, 1056 |
| BbvCI | CCTCAGC | 1 cut(s) | 1653 |
| BbvI | GCAGC | 5 cut(s) | 37, 1077, 1296, 1350, 1752 |
| BccI | CCATC | 2 cut(s) | 541, 945 |
| BceAI | ACGGC | 8 cut(s) | 178, 293, 648, 749, 1197, 1298, 1353, 1637 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1430, 1464, 1496, 1530 |
| BciT130I | CCWGG | 6 cut(s) | 158, 332, 524, 563, 1400, 1496 |
| BcnI | CCSGG | 3 cut(s) | 127, 240, 1027 |
| BcoDI | GTCTC | 4 cut(s) | 722, 821, 872, 1449 |
| BfaI | CTAG | 5 cut(s) | 771, 1379, 1461, 1602, 1748 |
| BfmI | CTRYAG | 2 cut(s) | 1074, 1766 |
| BfoI | RGCGCY | 4 cut(s) | 437, 523, 890, 984 |
| BfuAI | ACCTGC | 1 cut(s) | 391 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 143 |
| BglII | AGATCT | 1 cut(s) | 366 |
| BlpI | GCTNAGC | 1 cut(s) | 890 |
| Bme1390I | CCNGG | 9 cut(s) | 127, 158, 240, 332, 524, 563, 1027, 1400, 1496 |
| Bme18I | GGWCC | 7 cut(s) | 151, 470, 528, 570, 799, 975, 1492 |
| BmeT110I | CYCGRG | 1 cut(s) | 1154 |
| BmgBI | CACGTC | 1 cut(s) | 1171 |
| BmgT120I | GGNCC | 7 cut(s) | 151, 470, 528, 570, 799, 975, 1492 |
| BmrFI | CCNGG | 9 cut(s) | 127, 158, 240, 332, 524, 563, 1027, 1400, 1496 |
| BmsI | GCATC | 4 cut(s) | 25, 124, 417, 1438 |
| BoxI | GACNNNNGTC | 2 cut(s) | 714, 1313 |
| BpiI | GAAGAC | 1 cut(s) | 866 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 266, 298, 1099, 1131 |
| BpmI | CTGGAG | 3 cut(s) | 79, 140, 1646 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1653 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 890 |
| BpuMI | CCSGG | 3 cut(s) | 127, 240, 1027 |
| BsaBI | GATNNNNATC | 1 cut(s) | 15 |
| BsaHI | GRCGYC | 2 cut(s) | 780, 1385 |
| BsaI | GGTCTC | 1 cut(s) | 821 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 575, 605, 818, 848 |
| Bse118I | RCCGGY | 3 cut(s) | 213, 977, 1739 |
| Bse1I | ACTGG | 3 cut(s) | 96, 510, 692 |
| Bse8I | GATNNNNATC | 1 cut(s) | 15 |
| BseBI | CCWGG | 6 cut(s) | 158, 332, 524, 563, 1400, 1496 |
| BseGI | GGATG | 5 cut(s) | 16, 124, 139, 198, 231 |
| BseJI | GATNNNNATC | 1 cut(s) | 15 |
| BseMII | CTCAG | 4 cut(s) | 798, 869, 881, 1644 |
| BseNI | ACTGG | 3 cut(s) | 96, 510, 692 |
| BseRI | GAGGAG | 1 cut(s) | 287 |
| BseSI | GKGCMC | 3 cut(s) | 315, 357, 1747 |
| BseX3I | CGGCCG | 1 cut(s) | 1671 |
| BseXI | GCAGC | 5 cut(s) | 37, 1077, 1296, 1350, 1752 |
| BseYI | CCCAGC | 4 cut(s) | 729, 1057, 1273, 1645 |
| Bsh1236I | CGCG | 3 cut(s) | 66, 1032, 1166 |
| Bsh1285I | CGRYCG | 3 cut(s) | 477, 1307, 1674 |
| BshFI | GGCC | 8 cut(s) | 44, 281, 1111, 1439, 1559, 1610, 1673, 1739 |
| BshNI | GGYRCC | 5 cut(s) | 164, 352, 997, 1036, 1742 |
| BsiEI | CGRYCG | 3 cut(s) | 477, 1307, 1674 |
| BsiHKAI | GWGCWC | 2 cut(s) | 315, 1056 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1154 |
| BsiSI | CCGG | 6 cut(s) | 126, 214, 240, 978, 1027, 1740 |
| BslFI | GGGAC | 4 cut(s) | 541, 988, 1505, 1522 |
| BsmAI | GTCTC | 4 cut(s) | 722, 821, 872, 1449 |
| BsmBI | CGTCTC | 3 cut(s) | 722, 872, 1449 |
| BsmFI | GGGAC | 4 cut(s) | 541, 988, 1505, 1522 |
| BsnI | GGCC | 8 cut(s) | 44, 281, 1111, 1439, 1559, 1610, 1673, 1739 |
| Bso31I | GGTCTC | 1 cut(s) | 821 |
| BsoBI | CYCGRG | 1 cut(s) | 1154 |
| Bsp1286I | GDGCHC | 5 cut(s) | 315, 357, 896, 1056, 1747 |
| Bsp143I | GATC | 5 cut(s) | 10, 366, 745, 810, 1581 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 890 |
| BspANI | GGCC | 8 cut(s) | 44, 281, 1111, 1439, 1559, 1610, 1673, 1739 |
| BspCNI | CTCAG | 4 cut(s) | 799, 868, 882, 1645 |
| BspFNI | CGCG | 3 cut(s) | 66, 1032, 1166 |
| BspMAI | CTGCAG | 1 cut(s) | 1770 |
| BspMI | ACCTGC | 1 cut(s) | 391 |
| BspPI | GGATC | 2 cut(s) | 5, 1576 |
| BspT107I | GGYRCC | 5 cut(s) | 164, 352, 997, 1036, 1742 |
| BspTNI | GGTCTC | 1 cut(s) | 821 |
| BsrBI | CCGCTC | 4 cut(s) | 73, 626, 1270, 1489 |
| BsrFI | RCCGGY | 3 cut(s) | 213, 977, 1739 |
| BsrI | ACTGG | 3 cut(s) | 96, 510, 692 |
| BssAI | RCCGGY | 3 cut(s) | 213, 977, 1739 |
| BssMI | GATC | 5 cut(s) | 10, 366, 745, 810, 1581 |
| BssNI | GRCGYC | 2 cut(s) | 780, 1385 |
| BssSI | CACGAG | 2 cut(s) | 314, 759 |
| Bst2BI | CACGAG | 2 cut(s) | 314, 759 |
| Bst2UI | CCWGG | 6 cut(s) | 158, 332, 524, 563, 1400, 1496 |
| Bst6I | CTCTTC | 1 cut(s) | 651 |
| BstACI | GRCGYC | 2 cut(s) | 780, 1385 |
| BstDEI | CTNAG | 4 cut(s) | 807, 855, 890, 1653 |
| BstDSI | CCRYGG | 3 cut(s) | 477, 909, 1164 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1589 |
| BstF5I | GGATG | 5 cut(s) | 16, 124, 139, 198, 231 |
| BstFNI | CGCG | 3 cut(s) | 66, 1032, 1166 |
| BstH2I | RGCGCY | 4 cut(s) | 437, 523, 890, 984 |
| BstHHI | GCGC | 6 cut(s) | 66, 436, 522, 889, 983, 1032 |
| BstKTI | GATC | 5 cut(s) | 13, 369, 748, 813, 1584 |
| BstMAI | GTCTC | 4 cut(s) | 722, 821, 872, 1449 |
| BstMBI | GATC | 5 cut(s) | 10, 366, 745, 810, 1581 |
| BstMCI | CGRYCG | 3 cut(s) | 477, 1307, 1674 |
| BstNI | CCWGG | 6 cut(s) | 158, 332, 524, 563, 1400, 1496 |
| BstNSI | RCATGY | 1 cut(s) | 418 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 714, 1313 |
| BstSCI | CCNGG | 9 cut(s) | 125, 156, 238, 330, 522, 561, 1025, 1398, 1494 |
| BstSFI | CTRYAG | 2 cut(s) | 1074, 1766 |
| BstSLI | GKGCMC | 3 cut(s) | 315, 357, 1747 |
| BstUI | CGCG | 3 cut(s) | 66, 1032, 1166 |
| BstV1I | GCAGC | 5 cut(s) | 37, 1077, 1296, 1350, 1752 |
| BstV2I | GAAGAC | 1 cut(s) | 866 |
| BstX2I | RGATCY | 2 cut(s) | 366, 1581 |
| BstYI | RGATCY | 2 cut(s) | 366, 1581 |
| BstZI | CGGCCG | 1 cut(s) | 1671 |
| BsuRI | GGCC | 8 cut(s) | 44, 281, 1111, 1439, 1559, 1610, 1673, 1739 |
| BtgI | CCRYGG | 3 cut(s) | 477, 909, 1164 |
| BtgZI | GCGATG | 1 cut(s) | 81 |
| BtrI | CACGTC | 1 cut(s) | 1171 |
| BtsCI | GGATG | 5 cut(s) | 16, 124, 139, 198, 231 |
| BtsI | GCAGTG | 1 cut(s) | 1665 |
| BtsIMutI | CAGTG | 3 cut(s) | 103, 1056, 1665 |
| BveI | ACCTGC | 1 cut(s) | 391 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1399 |
| CciNI | GCGGCCGC | 1 cut(s) | 1671 |
| CfoI | GCGC | 6 cut(s) | 66, 436, 522, 889, 983, 1032 |
| Cfr10I | RCCGGY | 3 cut(s) | 213, 977, 1739 |
| Cfr13I | GGNCC | 7 cut(s) | 151, 470, 528, 570, 799, 975, 1492 |
| Cfr42I | CCGCGG | 1 cut(s) | 1167 |
| CseI | GACGC | 5 cut(s) | 788, 889, 1374, 1434, 1466 |
| Csp6I | GTAC | 4 cut(s) | 488, 637, 835, 1301 |
| CviAII | CATG | 3 cut(s) | 415, 832, 1367 |
| CviQI | GTAC | 4 cut(s) | 488, 637, 835, 1301 |
| DdeI | CTNAG | 4 cut(s) | 807, 855, 890, 1653 |
| DpnI | GATC | 5 cut(s) | 12, 368, 747, 812, 1583 |
| DpnII | GATC | 5 cut(s) | 10, 366, 745, 810, 1581 |
| EaeI | YGGCCR | 2 cut(s) | 1557, 1671 |
| EagI | CGGCCG | 1 cut(s) | 1671 |
| Eam1104I | CTCTTC | 1 cut(s) | 651 |
| EarI | CTCTTC | 1 cut(s) | 651 |
| EciI | GGCGGA | 2 cut(s) | 1140, 1718 |
| EclXI | CGGCCG | 1 cut(s) | 1671 |
| Eco147I | AGGCCT | 2 cut(s) | 281, 1111 |
| Eco24I | GRGCYC | 1 cut(s) | 896 |
| Eco31I | GGTCTC | 1 cut(s) | 821 |
| Eco47I | GGWCC | 7 cut(s) | 151, 470, 528, 570, 799, 975, 1492 |
| Eco52I | CGGCCG | 1 cut(s) | 1671 |
| Eco57I | CTGAAG | 5 cut(s) | 239, 347, 1154, 1315, 1571 |
| Eco88I | CYCGRG | 1 cut(s) | 1154 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1589 |
| EcoO109I | RGGNCCY | 3 cut(s) | 151, 528, 1492 |
| EcoRII | CCWGG | 6 cut(s) | 156, 330, 522, 561, 1398, 1494 |
| EcoT38I | GRGCYC | 1 cut(s) | 896 |
| Esp3I | CGTCTC | 3 cut(s) | 722, 872, 1449 |
| FaeI | CATG | 3 cut(s) | 418, 835, 1370 |
| FaqI | GGGAC | 4 cut(s) | 541, 988, 1505, 1522 |
| FatI | CATG | 3 cut(s) | 414, 831, 1366 |
| FauI | CCCGC | 7 cut(s) | 289, 354, 619, 1025, 1072, 1171, 1482 |
| FblI | GTMKAC | 2 cut(s) | 174, 1307 |
| FokI | GGATG | 5 cut(s) | 3, 131, 146, 205, 238 |
| FriOI | GRGCYC | 1 cut(s) | 896 |
| FspBI | CTAG | 5 cut(s) | 771, 1379, 1461, 1602, 1748 |
| GlaI | GCGC | 6 cut(s) | 65, 435, 521, 888, 982, 1031 |
| GsaI | CCCAGC | 4 cut(s) | 733, 1061, 1277, 1649 |
| GsuI | CTGGAG | 3 cut(s) | 79, 140, 1646 |
| HaeII | RGCGCY | 4 cut(s) | 437, 523, 890, 984 |
| HaeIII | GGCC | 8 cut(s) | 44, 281, 1111, 1439, 1559, 1610, 1673, 1739 |
| HapII | CCGG | 6 cut(s) | 126, 214, 240, 978, 1027, 1740 |
| HgaI | GACGC | 5 cut(s) | 788, 889, 1374, 1434, 1466 |
| HhaI | GCGC | 6 cut(s) | 66, 436, 522, 889, 983, 1032 |
| Hin1I | GRCGYC | 2 cut(s) | 780, 1385 |
| Hin1II | CATG | 3 cut(s) | 418, 835, 1370 |
| Hin6I | GCGC | 6 cut(s) | 64, 434, 520, 887, 981, 1030 |
| HinP1I | GCGC | 6 cut(s) | 64, 434, 520, 887, 981, 1030 |
| HincII | GTYRAC | 5 cut(s) | 211, 1308, 1318, 1410, 1722 |
| HindII | GTYRAC | 5 cut(s) | 211, 1308, 1318, 1410, 1722 |
| HinfI | GANTC | 8 cut(s) | 140, 286, 646, 694, 757, 1202, 1595, 1685 |
| HpaII | CCGG | 6 cut(s) | 126, 214, 240, 978, 1027, 1740 |
| HphI | GGTGA | 7 cut(s) | 259, 880, 959, 1186, 1250, 1250, 1643 |
| Hpy166II | GTNNAC | 9 cut(s) | 175, 211, 313, 871, 1241, 1308, 1318, 1410, 1722 |
| Hpy188I | TCNGA | 6 cut(s) | 366, 607, 623, 680, 858, 901 |
| Hpy188III | TCNNGA | 6 cut(s) | 8, 20, 650, 776, 968, 1228 |
| Hpy8I | GTNNAC | 9 cut(s) | 175, 211, 313, 871, 1241, 1308, 1318, 1410, 1722 |
| Hpy99I | CGWCG | 3 cut(s) | 1099, 1361, 1428 |
| HpyCH4IV | ACGT | 2 cut(s) | 590, 1170 |
| HpyCH4V | TGCA | 5 cut(s) | 313, 1190, 1366, 1451, 1768 |
| HpyF3I | CTNAG | 4 cut(s) | 807, 855, 890, 1653 |
| HpySE526I | ACGT | 2 cut(s) | 590, 1170 |
| Hsp92I | GRCGYC | 2 cut(s) | 780, 1385 |
| Hsp92II | CATG | 3 cut(s) | 418, 835, 1370 |
| HspAI | GCGC | 6 cut(s) | 64, 434, 520, 887, 981, 1030 |
| KspI | CCGCGG | 1 cut(s) | 1167 |
| Kzo9I | GATC | 5 cut(s) | 10, 366, 745, 810, 1581 |
| LmnI | GCTCC | 8 cut(s) | 583, 1059, 1087, 1153, 1165, 1420, 1649, 1659 |
| Lsp1109I | GCAGC | 5 cut(s) | 37, 1077, 1296, 1350, 1752 |
| LweI | GCATC | 4 cut(s) | 25, 124, 417, 1438 |
| MaeI | CTAG | 5 cut(s) | 771, 1379, 1461, 1602, 1748 |
| MaeII | ACGT | 2 cut(s) | 590, 1170 |
| MaeIII | GTNAC | 6 cut(s) | 252, 337, 683, 776, 947, 1069 |
| MalI | GATC | 5 cut(s) | 12, 368, 747, 812, 1583 |
| MbiI | CCGCTC | 4 cut(s) | 73, 626, 1270, 1489 |
| MboI | GATC | 5 cut(s) | 10, 366, 745, 810, 1581 |
| MboII | GAAGA | 6 cut(s) | 281, 353, 665, 668, 871, 1054 |
| MflI | RGATCY | 2 cut(s) | 366, 1581 |
| MhlI | GDGCHC | 5 cut(s) | 315, 357, 896, 1056, 1747 |
| MluCI | AATT | 3 cut(s) | 817, 1511, 1520 |
| MlyI | GAGTC | 6 cut(s) | 149, 640, 751, 1196, 1604, 1694 |
| MmeI | TCCRAC | 3 cut(s) | 585, 597, 1065 |
| MseI | TTAA | 2 cut(s) | 600, 1617 |
| MspA1I | CMGCKG | 6 cut(s) | 50, 296, 349, 1061, 1166, 1679 |
| MspI | CCGG | 6 cut(s) | 126, 214, 240, 978, 1027, 1740 |
| MspR9I | CCNGG | 9 cut(s) | 127, 158, 240, 332, 524, 563, 1027, 1400, 1496 |
| MvaI | CCWGG | 6 cut(s) | 158, 332, 524, 563, 1400, 1496 |
| MvnI | CGCG | 3 cut(s) | 66, 1032, 1166 |
| NciI | CCSGG | 3 cut(s) | 127, 240, 1027 |
| NdeII | GATC | 5 cut(s) | 10, 366, 745, 810, 1581 |
| NlaIII | CATG | 3 cut(s) | 418, 835, 1370 |
| NmeAIII | GCCGAG | 3 cut(s) | 163, 1246, 1636 |
| NmuCI | GTSAC | 3 cut(s) | 776, 947, 1069 |
| NotI | GCGGCCGC | 1 cut(s) | 1671 |
| NspI | RCATGY | 1 cut(s) | 418 |
| PceI | AGGCCT | 2 cut(s) | 281, 1111 |
| PciI | ACATGT | 1 cut(s) | 414 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1103 |
| PfeI | GAWTC | 2 cut(s) | 286, 694 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 417 |
| PfoI | TCCNGGA | 1 cut(s) | 156 |
| PleI | GAGTC | 6 cut(s) | 148, 640, 751, 1196, 1603, 1693 |
| PpsI | GAGTC | 6 cut(s) | 148, 640, 751, 1196, 1603, 1693 |
| PpuMI | RGGWCCY | 3 cut(s) | 151, 528, 1492 |
| PscI | ACATGT | 1 cut(s) | 414 |
| PshAI | GACNNNNGTC | 2 cut(s) | 714, 1313 |
| Psp5II | RGGWCCY | 3 cut(s) | 151, 528, 1492 |
| Psp6I | CCWGG | 6 cut(s) | 156, 330, 522, 561, 1398, 1494 |
| PspFI | CCCAGC | 4 cut(s) | 729, 1057, 1273, 1645 |
| PspGI | CCWGG | 6 cut(s) | 156, 330, 522, 561, 1398, 1494 |
| PspPI | GGNCC | 7 cut(s) | 151, 470, 528, 570, 799, 975, 1492 |
| PspPPI | RGGWCCY | 3 cut(s) | 151, 528, 1492 |
| PstI | CTGCAG | 1 cut(s) | 1770 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1399 |
| PsuI | RGATCY | 2 cut(s) | 366, 1581 |
| RsaI | GTAC | 4 cut(s) | 489, 638, 836, 1302 |
| RsaNI | GTAC | 4 cut(s) | 488, 637, 835, 1301 |
| SacII | CCGCGG | 1 cut(s) | 1167 |
| SalI | GTCGAC | 1 cut(s) | 1306 |
| SaqAI | TTAA | 2 cut(s) | 600, 1617 |
| Sau3AI | GATC | 5 cut(s) | 10, 366, 745, 810, 1581 |
| Sau96I | GGNCC | 7 cut(s) | 151, 470, 528, 570, 799, 975, 1492 |
| SchI | GAGTC | 6 cut(s) | 149, 640, 751, 1196, 1604, 1694 |
| ScrFI | CCNGG | 9 cut(s) | 127, 158, 240, 332, 524, 563, 1027, 1400, 1496 |
| SduI | GDGCHC | 5 cut(s) | 315, 357, 896, 1056, 1747 |
| SfaNI | GCATC | 4 cut(s) | 25, 124, 417, 1438 |
| SfcI | CTRYAG | 2 cut(s) | 1074, 1766 |
| Sfr303I | CCGCGG | 1 cut(s) | 1167 |
| SgrBI | CCGCGG | 1 cut(s) | 1167 |
| SinI | GGWCC | 7 cut(s) | 151, 470, 528, 570, 799, 975, 1492 |
| Sse9I | AATT | 3 cut(s) | 817, 1511, 1520 |
| SseBI | AGGCCT | 2 cut(s) | 281, 1111 |
| SspMI | CTAG | 5 cut(s) | 771, 1379, 1461, 1602, 1748 |
| StuI | AGGCCT | 2 cut(s) | 281, 1111 |
| StyD4I | CCNGG | 9 cut(s) | 125, 156, 238, 330, 522, 561, 1025, 1398, 1494 |
| TaiI | ACGT | 2 cut(s) | 593, 1173 |
| TaqI | TCGA | 5 cut(s) | 284, 744, 813, 1106, 1307 |
| TaqII | GACCGA | 2 cut(s) | 487, 1739 |
| TasI | AATT | 3 cut(s) | 817, 1511, 1520 |
| TfiI | GAWTC | 2 cut(s) | 286, 694 |
| Tru1I | TTAA | 2 cut(s) | 600, 1617 |
| Tru9I | TTAA | 2 cut(s) | 600, 1617 |
| TscAI | CASTG | 3 cut(s) | 103, 1056, 1672 |
| TseFI | GTSAC | 3 cut(s) | 776, 947, 1069 |
| TseI | GCWGC | 5 cut(s) | 50, 1090, 1284, 1363, 1765 |
| Tsp45I | GTSAC | 3 cut(s) | 776, 947, 1069 |
| TspGWI | ACGGA | 1 cut(s) | 1345 |
| TspRI | CASTG | 3 cut(s) | 103, 1056, 1672 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 417 |
| VneI | GTGCAC | 1 cut(s) | 311 |
| VpaK11BI | GGWCC | 7 cut(s) | 151, 470, 528, 570, 799, 975, 1492 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1589 |
| XceI | RCATGY | 1 cut(s) | 418 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 938 |
| XmiI | GTMKAC | 2 cut(s) | 174, 1307 |
| XspI | CTAG | 5 cut(s) | 771, 1379, 1461, 1602, 1748 |