Cytosolic purine
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 903, 2748 |
| Acc36I | ACCTGC | 2 cut(s) | 74, 1425 |
| AccB1I | GGYRCC | 3 cut(s) | 1220, 1408, 2820 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1050, 1473 |
| AccBSI | CCGCTC | 4 cut(s) | 400, 2463, 2677, 2818 |
| AccI | GTMKAC | 3 cut(s) | 1865, 2078, 2576 |
| AccII | CGCG | 9 cut(s) | 108, 294, 953, 1078, 1364, 1386, 1792, 2391, 2891 |
| AccIII | TCCGGA | 3 cut(s) | 255, 929, 1081 |
| AclWI | GGATC | 4 cut(s) | 1417, 2314, 2327, 2905 |
| AcoI | YGGCCR | 3 cut(s) | 70, 894, 2808 |
| AcsI | RAATTY | 1 cut(s) | 964 |
| AcuI | CTGAAG | 5 cut(s) | 1295, 1956, 2169, 2309, 2900 |
| AcvI | CACGTG | 1 cut(s) | 654 |
| AcyI | GRCGYC | 5 cut(s) | 900, 2001, 2214, 2654, 2745 |
| AdeI | CACNNNGTG | 1 cut(s) | 1761 |
| AfaI | GTAC | 3 cut(s) | 1545, 1568, 1661 |
| AflII | CTTAAG | 1 cut(s) | 52 |
| AflIII | ACRYGT | 5 cut(s) | 377, 651, 1470, 1790, 2862 |
| AgsI | TTSAA | 7 cut(s) | 684, 760, 781, 1341, 1915, 2128, 3017 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 633, 1654 |
| AjiI | CACGTC | 2 cut(s) | 378, 2620 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 798, 830, 862, 894 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2502, 2534 |
| AluBI | AGCT | 8 cut(s) | 289, 1309, 1337, 1630, 1768, 2683, 2737, 2920 |
| AluI | AGCT | 8 cut(s) | 289, 1309, 1337, 1630, 1768, 2683, 2737, 2920 |
| Alw21I | GWGCWC | 2 cut(s) | 1137, 1371 |
| Alw26I | GTCTC | 3 cut(s) | 1754, 1871, 2084 |
| Alw44I | GTGCAC | 1 cut(s) | 1367 |
| AlwI | GGATC | 4 cut(s) | 1417, 2314, 2327, 2905 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2668 |
| Ama87I | CYCGRG | 2 cut(s) | 314, 2423 |
| Aor13HI | TCCGGA | 3 cut(s) | 255, 929, 1081 |
| ApaI | GGGCCC | 1 cut(s) | 2389 |
| ApaLI | GTGCAC | 1 cut(s) | 1367 |
| ApoI | RAATTY | 1 cut(s) | 964 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2323, 2355 |
| AsuC2I | CCSGG | 5 cut(s) | 1296, 1759, 1887, 2100, 2383 |
| AvaI | CYCGRG | 2 cut(s) | 314, 2423 |
| AvaII | GGWCC | 5 cut(s) | 250, 1526, 1927, 2140, 2878 |
| AxyI | CCTNAGG | 1 cut(s) | 1643 |
| BaeGI | GKGCMC | 4 cut(s) | 1371, 1466, 2389, 2619 |
| BalI | TGGCCA | 1 cut(s) | 2810 |
| BamHI | GGATCC | 1 cut(s) | 2319 |
| BanI | GGYRCC | 3 cut(s) | 1220, 1408, 2820 |
| BanII | GRGCYC | 4 cut(s) | 2024, 2237, 2389, 2634 |
| BauI | CACGAG | 2 cut(s) | 1370, 2636 |
| BbrPI | CACGTG | 1 cut(s) | 654 |
| BbsI | GAAGAC | 3 cut(s) | 769, 1994, 2207 |
| Bbv12I | GWGCWC | 2 cut(s) | 1137, 1371 |
| BbvCI | CCTCAGC | 2 cut(s) | 2684, 2985 |
| BccI | CCATC | 7 cut(s) | 253, 429, 857, 886, 2032, 2245, 2765 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2759, 2793 |
| BciVI | GTATCC | 3 cut(s) | 327, 1147, 1183 |
| BclI | TGATCA | 1 cut(s) | 1632 |
| BcnI | CCSGG | 5 cut(s) | 1296, 1759, 1887, 2100, 2383 |
| BcoDI | GTCTC | 3 cut(s) | 1754, 1871, 2084 |
| BfaI | CTAG | 8 cut(s) | 120, 239, 495, 555, 860, 1022, 1139, 2790 |
| BfmI | CTRYAG | 4 cut(s) | 349, 1037, 1418, 2445 |
| BfoI | RGCGCY | 5 cut(s) | 1493, 1579, 1625, 2231, 2338 |
| BfrI | CTTAAG | 1 cut(s) | 52 |
| BfuAI | ACCTGC | 2 cut(s) | 74, 1425 |
| BfuI | GTATCC | 3 cut(s) | 327, 1147, 1183 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 69 |
| BlpI | GCTNAGC | 4 cut(s) | 455, 509, 569, 2231 |
| Bme18I | GGWCC | 5 cut(s) | 250, 1526, 1927, 2140, 2878 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 633, 1654 |
| BmeT110I | CYCGRG | 2 cut(s) | 314, 2423 |
| BmgBI | CACGTC | 2 cut(s) | 378, 2620 |
| BmrI | ACTGGG | 1 cut(s) | 2552 |
| BmsI | GCATC | 5 cut(s) | 30, 153, 1452, 2767, 2776 |
| BmuI | ACTGGG | 1 cut(s) | 2552 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2582 |
| BpiI | GAAGAC | 3 cut(s) | 769, 1994, 2207 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 394, 426, 1383, 1415 |
| BpmI | CTGGAG | 7 cut(s) | 1973, 2186, 2335, 2579, 2690, 2846, 2942 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2684, 2985 |
| Bpu1102I | GCTNAGC | 4 cut(s) | 455, 509, 569, 2231 |
| BpuMI | CCSGG | 5 cut(s) | 1296, 1759, 1887, 2100, 2383 |
| BsaAI | YACGTR | 2 cut(s) | 654, 1570 |
| BsaHI | GRCGYC | 5 cut(s) | 900, 2001, 2214, 2654, 2745 |
| BsaI | GGTCTC | 2 cut(s) | 1871, 2084 |
| BsaWI | WCCGGW | 4 cut(s) | 255, 929, 1081, 1287 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1946, 1976, 2159, 2189, 2507, 2537 |
| Bse118I | RCCGGY | 4 cut(s) | 1269, 1348, 1850, 2063 |
| Bse1I | ACTGG | 7 cut(s) | 1566, 1667, 1743, 1899, 2112, 2352, 2547 |
| Bse21I | CCTNAGG | 1 cut(s) | 1643 |
| Bse3DI | GCAATG | 3 cut(s) | 1680, 1929, 2142 |
| BseAI | TCCGGA | 3 cut(s) | 255, 929, 1081 |
| BseGI | GGATG | 5 cut(s) | 88, 264, 677, 897, 1254 |
| BseMI | GCAATG | 3 cut(s) | 1680, 1929, 2142 |
| BseNI | ACTGG | 7 cut(s) | 1566, 1667, 1743, 1899, 2112, 2352, 2547 |
| BseRI | GAGGAG | 4 cut(s) | 1145, 1742, 2378, 2381 |
| BseSI | GKGCMC | 4 cut(s) | 1371, 1466, 2389, 2619 |
| BseYI | CCCAGC | 2 cut(s) | 2048, 2306 |
| Bsh1236I | CGCG | 9 cut(s) | 108, 294, 953, 1078, 1364, 1386, 1792, 2391, 2891 |
| Bsh1285I | CGRYCG | 3 cut(s) | 1533, 2576, 2580 |
| BshNI | GGYRCC | 3 cut(s) | 1220, 1408, 2820 |
| BsiEI | CGRYCG | 3 cut(s) | 1533, 2576, 2580 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1137, 1371 |
| BsiHKCI | CYCGRG | 2 cut(s) | 314, 2423 |
| BslFI | GGGAC | 5 cut(s) | 212, 1661, 2726, 2851, 2891 |
| BsmAI | GTCTC | 3 cut(s) | 1754, 1871, 2084 |
| BsmBI | CGTCTC | 1 cut(s) | 1754 |
| BsmFI | GGGAC | 5 cut(s) | 212, 1661, 2726, 2851, 2891 |
| Bso31I | GGTCTC | 2 cut(s) | 1871, 2084 |
| BsoBI | CYCGRG | 2 cut(s) | 314, 2423 |
| Bsp120I | GGGCCC | 1 cut(s) | 2385 |
| Bsp1286I | GDGCHC | 8 cut(s) | 1137, 1371, 1466, 2024, 2237, 2389, 2619, 2634 |
| Bsp13I | TCCGGA | 3 cut(s) | 255, 929, 1081 |
| Bsp143I | GATC | 7 cut(s) | 31, 798, 1422, 1632, 2319, 2910, 2946 |
| Bsp1720I | GCTNAGC | 4 cut(s) | 455, 509, 569, 2231 |
| Bsp19I | CCATGG | 1 cut(s) | 162 |
| BspEI | TCCGGA | 3 cut(s) | 255, 929, 1081 |
| BspFNI | CGCG | 9 cut(s) | 108, 294, 953, 1078, 1364, 1386, 1792, 2391, 2891 |
| BspMAI | CTGCAG | 1 cut(s) | 1422 |
| BspMI | ACCTGC | 2 cut(s) | 74, 1425 |
| BspPI | GGATC | 4 cut(s) | 1417, 2314, 2327, 2905 |
| BspT107I | GGYRCC | 3 cut(s) | 1220, 1408, 2820 |
| BspTI | CTTAAG | 1 cut(s) | 52 |
| BspTNI | GGTCTC | 2 cut(s) | 1871, 2084 |
| BsrBI | CCGCTC | 4 cut(s) | 400, 2463, 2677, 2818 |
| BsrDI | GCAATG | 3 cut(s) | 1680, 1929, 2142 |
| BsrFI | RCCGGY | 4 cut(s) | 1269, 1348, 1850, 2063 |
| BsrI | ACTGG | 7 cut(s) | 1566, 1667, 1743, 1899, 2112, 2352, 2547 |
| BssAI | RCCGGY | 4 cut(s) | 1269, 1348, 1850, 2063 |
| BssMI | GATC | 7 cut(s) | 31, 798, 1422, 1632, 2319, 2910, 2946 |
| BssNAI | GTATAC | 2 cut(s) | 1866, 2079 |
| BssNI | GRCGYC | 5 cut(s) | 900, 2001, 2214, 2654, 2745 |
| BssSI | CACGAG | 2 cut(s) | 1370, 2636 |
| BssT1I | CCWWGG | 3 cut(s) | 94, 162, 2847 |
| Bst1107I | GTATAC | 2 cut(s) | 1866, 2079 |
| Bst2BI | CACGAG | 2 cut(s) | 1370, 2636 |
| Bst6I | CTCTTC | 1 cut(s) | 2355 |
| BstACI | GRCGYC | 5 cut(s) | 900, 2001, 2214, 2654, 2745 |
| BstAFI | CTTAAG | 1 cut(s) | 52 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1830 |
| BstBAI | YACGTR | 2 cut(s) | 654, 1570 |
| BstDSI | CCRYGG | 6 cut(s) | 162, 1049, 1362, 1686, 2037, 2250 |
| BstEII | GGTNACC | 2 cut(s) | 2377, 2884 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1142 |
| BstF5I | GGATG | 5 cut(s) | 88, 264, 677, 897, 1254 |
| BstFNI | CGCG | 9 cut(s) | 108, 294, 953, 1078, 1364, 1386, 1792, 2391, 2891 |
| BstH2I | RGCGCY | 5 cut(s) | 1493, 1579, 1625, 2231, 2338 |
| BstKTI | GATC | 7 cut(s) | 34, 801, 1425, 1635, 2322, 2913, 2949 |
| BstMAI | GTCTC | 3 cut(s) | 1754, 1871, 2084 |
| BstMBI | GATC | 7 cut(s) | 31, 798, 1422, 1632, 2319, 2910, 2946 |
| BstMCI | CGRYCG | 3 cut(s) | 1533, 2576, 2580 |
| BstNSI | RCATGY | 3 cut(s) | 1474, 1828, 2866 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2582 |
| BstPI | GGTNACC | 2 cut(s) | 2377, 2884 |
| BstSFI | CTRYAG | 4 cut(s) | 349, 1037, 1418, 2445 |
| BstSLI | GKGCMC | 4 cut(s) | 1371, 1466, 2389, 2619 |
| BstUI | CGCG | 9 cut(s) | 108, 294, 953, 1078, 1364, 1386, 1792, 2391, 2891 |
| BstV2I | GAAGAC | 3 cut(s) | 769, 1994, 2207 |
| BstX2I | RGATCY | 3 cut(s) | 1422, 2319, 2910 |
| BstYI | RGATCY | 3 cut(s) | 1422, 2319, 2910 |
| BstZ17I | GTATAC | 2 cut(s) | 1866, 2079 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1643 |
| BsuI | GTATCC | 3 cut(s) | 327, 1147, 1183 |
| BtgI | CCRYGG | 6 cut(s) | 162, 1049, 1362, 1686, 2037, 2250 |
| BtgZI | GCGATG | 2 cut(s) | 1429, 2790 |
| BtrI | CACGTC | 2 cut(s) | 378, 2620 |
| BtsCI | GGATG | 5 cut(s) | 88, 264, 677, 897, 1254 |
| BtsI | GCAGTG | 2 cut(s) | 925, 1007 |
| BtsIMutI | CAGTG | 8 cut(s) | 154, 648, 743, 925, 1007, 2015, 2359, 2593 |
| BveI | ACCTGC | 2 cut(s) | 74, 1425 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2668 |
| Cfr10I | RCCGGY | 4 cut(s) | 1269, 1348, 1850, 2063 |
| Cfr42I | CCGCGG | 1 cut(s) | 1365 |
| CsiI | ACCWGGT | 1 cut(s) | 2880 |
| Csp6I | GTAC | 3 cut(s) | 1544, 1567, 1660 |
| CviAII | CATG | 6 cut(s) | 163, 1127, 1471, 1825, 2263, 2863 |
| CviQI | GTAC | 3 cut(s) | 1544, 1567, 1660 |
| DpnI | GATC | 7 cut(s) | 33, 800, 1424, 1634, 2321, 2912, 2948 |
| DpnII | GATC | 7 cut(s) | 31, 798, 1422, 1632, 2319, 2910, 2946 |
| DraI | TTTAAA | 1 cut(s) | 360 |
| DraIII | CACNNNGTG | 1 cut(s) | 1761 |
| DriI | GACNNNNNGTC | 2 cut(s) | 633, 1654 |
| EaeI | YGGCCR | 3 cut(s) | 70, 894, 2808 |
| Eam1104I | CTCTTC | 1 cut(s) | 2355 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 633, 1654 |
| EarI | CTCTTC | 1 cut(s) | 2355 |
| EciI | GGCGGA | 4 cut(s) | 971, 1305, 1738, 2409 |
| Eco130I | CCWWGG | 3 cut(s) | 94, 162, 2847 |
| Eco24I | GRGCYC | 4 cut(s) | 2024, 2237, 2389, 2634 |
| Eco31I | GGTCTC | 2 cut(s) | 1871, 2084 |
| Eco47I | GGWCC | 5 cut(s) | 250, 1526, 1927, 2140, 2878 |
| Eco57I | CTGAAG | 5 cut(s) | 1295, 1956, 2169, 2309, 2900 |
| Eco72I | CACGTG | 1 cut(s) | 654 |
| Eco81I | CCTNAGG | 1 cut(s) | 1643 |
| Eco88I | CYCGRG | 2 cut(s) | 314, 2423 |
| Eco91I | GGTNACC | 2 cut(s) | 2377, 2884 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1142 |
| EcoO109I | RGGNCCY | 2 cut(s) | 203, 2385 |
| EcoO65I | GGTNACC | 2 cut(s) | 2377, 2884 |
| EcoT14I | CCWWGG | 3 cut(s) | 94, 162, 2847 |
| EcoT38I | GRGCYC | 4 cut(s) | 2024, 2237, 2389, 2634 |
| ErhI | CCWWGG | 3 cut(s) | 94, 162, 2847 |
| Esp3I | CGTCTC | 1 cut(s) | 1754 |
| FaeI | CATG | 6 cut(s) | 166, 1130, 1474, 1828, 2266, 2866 |
| FaqI | GGGAC | 5 cut(s) | 212, 1661, 2726, 2851, 2891 |
| FatI | CATG | 6 cut(s) | 162, 1126, 1470, 1824, 2262, 2862 |
| FbaI | TGATCA | 1 cut(s) | 1632 |
| FblI | GTMKAC | 3 cut(s) | 1865, 2078, 2576 |
| FokI | GGATG | 5 cut(s) | 75, 271, 684, 904, 1261 |
| FriOI | GRGCYC | 4 cut(s) | 2024, 2237, 2389, 2634 |
| FspBI | CTAG | 8 cut(s) | 120, 239, 495, 555, 860, 1022, 1139, 2790 |
| GsaI | CCCAGC | 2 cut(s) | 2052, 2310 |
| GsuI | CTGGAG | 7 cut(s) | 1973, 2186, 2335, 2579, 2690, 2846, 2942 |
| HaeII | RGCGCY | 5 cut(s) | 1493, 1579, 1625, 2231, 2338 |
| Hin1I | GRCGYC | 5 cut(s) | 900, 2001, 2214, 2654, 2745 |
| Hin1II | CATG | 6 cut(s) | 166, 1130, 1474, 1828, 2266, 2866 |
| HincII | GTYRAC | 8 cut(s) | 159, 649, 712, 1231, 1267, 1600, 2342, 2577 |
| HindII | GTYRAC | 8 cut(s) | 159, 649, 712, 1231, 1267, 1600, 2342, 2577 |
| HindIII | AAGCTT | 1 cut(s) | 1335 |
| Hpy188I | TCNGA | 6 cut(s) | 174, 639, 803, 1731, 2029, 2242 |
| Hpy99I | CGWCG | 9 cut(s) | 371, 710, 776, 902, 1614, 2507, 2624, 2750, 2757 |
| HpyAV | CCTTC | 9 cut(s) | 88, 778, 1517, 1684, 2333, 2716, 2887, 2924, 2954 |
| HpyCH4IV | ACGT | 9 cut(s) | 377, 653, 708, 900, 1569, 2619, 2745, 2755, 2805 |
| HpyCH4V | TGCA | 6 cut(s) | 431, 1126, 1369, 1420, 1680, 1824 |
| HpySE526I | ACGT | 9 cut(s) | 377, 653, 708, 900, 1569, 2619, 2745, 2755, 2805 |
| Hsp92I | GRCGYC | 5 cut(s) | 900, 2001, 2214, 2654, 2745 |
| Hsp92II | CATG | 6 cut(s) | 166, 1130, 1474, 1828, 2266, 2866 |
| Kpn2I | TCCGGA | 3 cut(s) | 255, 929, 1081 |
| Ksp22I | TGATCA | 1 cut(s) | 1632 |
| KspI | CCGCGG | 1 cut(s) | 1365 |
| Kzo9I | GATC | 7 cut(s) | 31, 798, 1422, 1632, 2319, 2910, 2946 |
| LweI | GCATC | 5 cut(s) | 30, 153, 1452, 2767, 2776 |
| MabI | ACCWGGT | 1 cut(s) | 2880 |
| MaeI | CTAG | 8 cut(s) | 120, 239, 495, 555, 860, 1022, 1139, 2790 |
| MaeII | ACGT | 9 cut(s) | 377, 653, 708, 900, 1569, 2619, 2745, 2755, 2805 |
| MalI | GATC | 7 cut(s) | 33, 800, 1424, 1634, 2321, 2912, 2948 |
| MbiI | CCGCTC | 4 cut(s) | 400, 2463, 2677, 2818 |
| MboI | GATC | 7 cut(s) | 31, 798, 1422, 1632, 2319, 2910, 2946 |
| MboII | GAAGA | 9 cut(s) | 739, 769, 818, 1067, 1999, 2212, 2372, 2413, 2911 |
| MflI | RGATCY | 3 cut(s) | 1422, 2319, 2910 |
| MhlI | GDGCHC | 8 cut(s) | 1137, 1371, 1466, 2024, 2237, 2389, 2619, 2634 |
| MlsI | TGGCCA | 1 cut(s) | 2810 |
| MluCI | AATT | 7 cut(s) | 138, 269, 813, 837, 964, 1945, 2158 |
| MluI | ACGCGT | 1 cut(s) | 1790 |
| MluNI | TGGCCA | 1 cut(s) | 2810 |
| MlyI | GAGTC | 7 cut(s) | 112, 234, 968, 1205, 1643, 2342, 2933 |
| Mox20I | TGGCCA | 1 cut(s) | 2810 |
| MroI | TCCGGA | 3 cut(s) | 255, 929, 1081 |
| MscI | TGGCCA | 1 cut(s) | 2810 |
| MseI | TTAA | 3 cut(s) | 53, 359, 849 |
| Msp20I | TGGCCA | 1 cut(s) | 2810 |
| MspCI | CTTAAG | 1 cut(s) | 52 |
| MvnI | CGCG | 9 cut(s) | 108, 294, 953, 1078, 1364, 1386, 1792, 2391, 2891 |
| NciI | CCSGG | 5 cut(s) | 1296, 1759, 1887, 2100, 2383 |
| NcoI | CCATGG | 1 cut(s) | 162 |
| NdeII | GATC | 7 cut(s) | 31, 798, 1422, 1632, 2319, 2910, 2946 |
| NlaIII | CATG | 6 cut(s) | 166, 1130, 1474, 1828, 2266, 2866 |
| NmeAIII | GCCGAG | 2 cut(s) | 391, 2515 |
| NspI | RCATGY | 3 cut(s) | 1474, 1828, 2866 |
| PaeI | GCATGC | 1 cut(s) | 1828 |
| PasI | CCCWGGG | 1 cut(s) | 46 |
| PciI | ACATGT | 2 cut(s) | 1470, 2862 |
| PfeI | GAWTC | 8 cut(s) | 319, 870, 926, 1160, 1726, 2471, 2591, 3017 |
| PflFI | GACNNNGTC | 2 cut(s) | 467, 521 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1050, 1473 |
| PfoI | TCCNGGA | 2 cut(s) | 1950, 2163 |
| PleI | GAGTC | 7 cut(s) | 111, 233, 968, 1204, 1643, 2342, 2932 |
| PmaCI | CACGTG | 1 cut(s) | 654 |
| PmlI | CACGTG | 1 cut(s) | 654 |
| PpsI | GAGTC | 7 cut(s) | 111, 233, 968, 1204, 1643, 2342, 2932 |
| Ppu21I | YACGTR | 2 cut(s) | 654, 1570 |
| PscI | ACATGT | 2 cut(s) | 1470, 2862 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2582 |
| PspCI | CACGTG | 1 cut(s) | 654 |
| PspEI | GGTNACC | 2 cut(s) | 2377, 2884 |
| PspFI | CCCAGC | 2 cut(s) | 2048, 2306 |
| PspOMI | GGGCCC | 1 cut(s) | 2385 |
| PstI | CTGCAG | 1 cut(s) | 1422 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2668 |
| PsuI | RGATCY | 3 cut(s) | 1422, 2319, 2910 |
| PsyI | GACNNNGTC | 2 cut(s) | 467, 521 |
| PvuII | CAGCTG | 1 cut(s) | 2920 |
| RsaI | GTAC | 3 cut(s) | 1545, 1568, 1661 |
| RsaNI | GTAC | 3 cut(s) | 1544, 1567, 1660 |
| SacII | CCGCGG | 1 cut(s) | 1365 |
| SalI | GTCGAC | 1 cut(s) | 2575 |
| SaqAI | TTAA | 3 cut(s) | 53, 359, 849 |
| Sau3AI | GATC | 7 cut(s) | 31, 798, 1422, 1632, 2319, 2910, 2946 |
| SchI | GAGTC | 7 cut(s) | 112, 234, 968, 1205, 1643, 2342, 2933 |
| SduI | GDGCHC | 8 cut(s) | 1137, 1371, 1466, 2024, 2237, 2389, 2619, 2634 |
| SexAI | ACCWGGT | 1 cut(s) | 2880 |
| SfaNI | GCATC | 5 cut(s) | 30, 153, 1452, 2767, 2776 |
| SfcI | CTRYAG | 4 cut(s) | 349, 1037, 1418, 2445 |
| Sfr303I | CCGCGG | 1 cut(s) | 1365 |
| SgrBI | CCGCGG | 1 cut(s) | 1365 |
| SinI | GGWCC | 5 cut(s) | 250, 1526, 1927, 2140, 2878 |
| SmlI | CTYRAG | 1 cut(s) | 52 |
| SmoI | CTYRAG | 1 cut(s) | 52 |
| SphI | GCATGC | 1 cut(s) | 1828 |
| Sse9I | AATT | 7 cut(s) | 138, 269, 813, 837, 964, 1945, 2158 |
| SspI | AATATT | 1 cut(s) | 1380 |
| SspMI | CTAG | 8 cut(s) | 120, 239, 495, 555, 860, 1022, 1139, 2790 |
| StyI | CCWWGG | 3 cut(s) | 94, 162, 2847 |
| TaiI | ACGT | 9 cut(s) | 380, 656, 711, 903, 1572, 2622, 2748, 2758, 2808 |
| TaqI | TCGA | 9 cut(s) | 24, 705, 868, 914, 1029, 1212, 1652, 2576, 2748 |
| TaqII | GACCGA | 2 cut(s) | 1543, 2562 |
| TasI | AATT | 7 cut(s) | 138, 269, 813, 837, 964, 1945, 2158 |
| TfiI | GAWTC | 8 cut(s) | 319, 870, 926, 1160, 1726, 2471, 2591, 3017 |
| Tru1I | TTAA | 3 cut(s) | 53, 359, 849 |
| Tru9I | TTAA | 3 cut(s) | 53, 359, 849 |
| TscAI | CASTG | 8 cut(s) | 154, 648, 750, 925, 1014, 2022, 2359, 2593 |
| TspDTI | ATGAA | 3 cut(s) | 603, 951, 2463 |
| TspGWI | ACGGA | 4 cut(s) | 263, 1038, 1553, 1736 |
| TspRI | CASTG | 8 cut(s) | 154, 648, 750, 925, 1014, 2022, 2359, 2593 |
| Tth111I | GACNNNGTC | 2 cut(s) | 467, 521 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1050, 1473 |
| Vha464I | CTTAAG | 1 cut(s) | 52 |
| VneI | GTGCAC | 1 cut(s) | 1367 |
| VpaK11BI | GGWCC | 5 cut(s) | 250, 1526, 1927, 2140, 2878 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1142 |
| XapI | RAATTY | 1 cut(s) | 964 |
| XbaI | TCTAGA | 1 cut(s) | 859 |
| XceI | RCATGY | 3 cut(s) | 1474, 1828, 2866 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2279, 2665 |
| XmiI | GTMKAC | 3 cut(s) | 1865, 2078, 2576 |
| XspI | CTAG | 8 cut(s) | 120, 239, 495, 555, 860, 1022, 1139, 2790 |
| ZraI | GACGTC | 2 cut(s) | 901, 2746 |