Cytosolic purine
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1975 |
| Acc36I | ACCTGC | 1 cut(s) | 1057 |
| AccB1I | GGYRCC | 3 cut(s) | 1838, 1931, 2054 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 154 |
| AccBSI | CCGCTC | 6 cut(s) | 497, 922, 1240, 1480, 1546, 1609 |
| AccI | GTMKAC | 1 cut(s) | 509 |
| AccII | CGCG | 9 cut(s) | 522, 537, 669, 696, 698, 1300, 1521, 1925, 2083 |
| AclWI | GGATC | 2 cut(s) | 554, 2176 |
| AcoI | YGGCCR | 6 cut(s) | 90, 876, 1488, 1536, 1731, 1881 |
| AcsI | RAATTY | 1 cut(s) | 164 |
| AcuI | CTGAAG | 3 cut(s) | 1312, 1734, 1847 |
| AcvI | CACGTG | 1 cut(s) | 2018 |
| AcyI | GRCGYC | 2 cut(s) | 1382, 1839 |
| AfaI | GTAC | 4 cut(s) | 296, 728, 1723, 1891 |
| AfeI | AGCGCT | 1 cut(s) | 898 |
| AflIII | ACRYGT | 2 cut(s) | 198, 1368 |
| AgeI | ACCGGT | 1 cut(s) | 596 |
| AgsI | TTSAA | 4 cut(s) | 641, 680, 1745, 1753 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 382 |
| AjnI | CCWGG | 5 cut(s) | 153, 342, 437, 2028, 2164 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1448, 1480 |
| AluBI | AGCT | 8 cut(s) | 37, 289, 905, 1145, 1195, 1332, 1411, 1528 |
| AluI | AGCT | 8 cut(s) | 37, 289, 905, 1145, 1195, 1332, 1411, 1528 |
| Alw21I | GWGCWC | 1 cut(s) | 1413 |
| Alw26I | GTCTC | 7 cut(s) | 713, 764, 971, 1436, 1576, 1895, 2057 |
| AlwI | GGATC | 2 cut(s) | 554, 2176 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 757 |
| Ama87I | CYCGRG | 2 cut(s) | 767, 2043 |
| Aor51HI | AGCGCT | 1 cut(s) | 898 |
| ApaI | GGGCCC | 1 cut(s) | 1120 |
| ApoI | RAATTY | 1 cut(s) | 164 |
| AsiGI | ACCGGT | 1 cut(s) | 596 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 273 |
| AsuC2I | CCSGG | 6 cut(s) | 24, 244, 651, 1033, 2044, 2045 |
| AsuHPI | GGTGA | 8 cut(s) | 43, 848, 1027, 1120, 1247, 1514, 1687, 1703 |
| AsuII | TTCGAA | 1 cut(s) | 1151 |
| AvaI | CYCGRG | 2 cut(s) | 767, 2043 |
| AvaII | GGWCC | 5 cut(s) | 399, 691, 1023, 1977, 2088 |
| AxyI | CCTNAGG | 1 cut(s) | 1706 |
| BaeGI | GKGCMC | 2 cut(s) | 1120, 1936 |
| BalI | TGGCCA | 2 cut(s) | 1490, 1538 |
| BanI | GGYRCC | 3 cut(s) | 1838, 1931, 2054 |
| BanII | GRGCYC | 4 cut(s) | 29, 1120, 1413, 1807 |
| BbrPI | CACGTG | 1 cut(s) | 2018 |
| Bbv12I | GWGCWC | 1 cut(s) | 1413 |
| BccI | CCATC | 9 cut(s) | 497, 836, 837, 1226, 1263, 1547, 1850, 2045, 2083 |
| BceAI | ACGGC | 4 cut(s) | 66, 77, 1169, 1283 |
| BciT130I | CCWGG | 5 cut(s) | 155, 344, 439, 2030, 2166 |
| BcnI | CCSGG | 6 cut(s) | 24, 244, 651, 1033, 2044, 2045 |
| BcoDI | GTCTC | 7 cut(s) | 713, 764, 971, 1436, 1576, 1895, 2057 |
| BfaI | CTAG | 6 cut(s) | 77, 1271, 1286, 1808, 2070, 2176 |
| BfmI | CTRYAG | 2 cut(s) | 900, 1601 |
| BfoI | RGCGCY | 5 cut(s) | 307, 782, 900, 1049, 1842 |
| BfuAI | ACCTGC | 1 cut(s) | 1057 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 875 |
| BlpI | GCTNAGC | 1 cut(s) | 782 |
| Bme18I | GGWCC | 5 cut(s) | 399, 691, 1023, 1977, 2088 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 382 |
| BmeT110I | CYCGRG | 2 cut(s) | 767, 2043 |
| BmsI | GCATC | 4 cut(s) | 74, 915, 1861, 2128 |
| BoxI | GACNNNNGTC | 2 cut(s) | 758, 1907 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 111, 143, 1184, 1216 |
| BpmI | CTGGAG | 4 cut(s) | 737, 1070, 1418, 1706 |
| Bpu10I | CCTNAGC | 2 cut(s) | 332, 1412 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 782 |
| Bpu14I | TTCGAA | 1 cut(s) | 1151 |
| BpuMI | CCSGG | 6 cut(s) | 24, 244, 651, 1033, 2044, 2045 |
| Bsa29I | ATCGAT | 1 cut(s) | 68 |
| BsaAI | YACGTR | 2 cut(s) | 298, 2018 |
| BsaHI | GRCGYC | 2 cut(s) | 1382, 1839 |
| BsaI | GGTCTC | 2 cut(s) | 713, 1436 |
| BsaWI | WCCGGW | 3 cut(s) | 15, 596, 799 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 710, 740 |
| Bse118I | RCCGGY | 5 cut(s) | 596, 850, 878, 970, 1879 |
| Bse1I | ACTGG | 2 cut(s) | 395, 787 |
| Bse21I | CCTNAGG | 1 cut(s) | 1706 |
| Bse3DI | GCAATG | 2 cut(s) | 225, 693 |
| BseBI | CCWGG | 5 cut(s) | 155, 344, 439, 2030, 2166 |
| BseCI | ATCGAT | 1 cut(s) | 68 |
| BseGI | GGATG | 7 cut(s) | 61, 489, 847, 930, 1105, 1963, 2056 |
| BseMI | GCAATG | 2 cut(s) | 225, 693 |
| BseMII | CTCAG | 5 cut(s) | 323, 773, 1426, 1662, 1697 |
| BseNI | ACTGG | 2 cut(s) | 395, 787 |
| BseRI | GAGGAG | 2 cut(s) | 542, 1013 |
| BseSI | GKGCMC | 2 cut(s) | 1120, 1936 |
| BseX3I | CGGCCG | 2 cut(s) | 90, 1731 |
| BseYI | CCCAGC | 4 cut(s) | 747, 905, 1799, 1980 |
| BsgI | GTGCAG | 4 cut(s) | 23, 878, 1346, 1664 |
| Bsh1236I | CGCG | 9 cut(s) | 522, 537, 669, 696, 698, 1300, 1521, 1925, 2083 |
| Bsh1285I | CGRYCG | 3 cut(s) | 93, 1734, 2112 |
| BshNI | GGYRCC | 3 cut(s) | 1838, 1931, 2054 |
| BshTI | ACCGGT | 1 cut(s) | 596 |
| BshVI | ATCGAT | 1 cut(s) | 68 |
| BsiEI | CGRYCG | 3 cut(s) | 93, 1734, 2112 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1413 |
| BsiHKCI | CYCGRG | 2 cut(s) | 767, 2043 |
| BslFI | GGGAC | 6 cut(s) | 389, 412, 513, 1371, 1562, 1963 |
| BsmAI | GTCTC | 7 cut(s) | 713, 764, 971, 1436, 1576, 1895, 2057 |
| BsmBI | CGTCTC | 1 cut(s) | 764 |
| BsmFI | GGGAC | 6 cut(s) | 389, 412, 513, 1371, 1562, 1963 |
| BsmI | GAATGC | 1 cut(s) | 1748 |
| Bso31I | GGTCTC | 2 cut(s) | 713, 1436 |
| BsoBI | CYCGRG | 2 cut(s) | 767, 2043 |
| Bsp119I | TTCGAA | 1 cut(s) | 1151 |
| Bsp120I | GGGCCC | 1 cut(s) | 1116 |
| Bsp1286I | GDGCHC | 5 cut(s) | 29, 1120, 1413, 1807, 1936 |
| Bsp143I | GATC | 6 cut(s) | 360, 546, 1110, 2092, 2109, 2168 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 782 |
| Bsp68I | TCGCGA | 1 cut(s) | 522 |
| BspCNI | CTCAG | 5 cut(s) | 324, 774, 1425, 1663, 1698 |
| BspDI | ATCGAT | 1 cut(s) | 68 |
| BspFNI | CGCG | 9 cut(s) | 522, 537, 669, 696, 698, 1300, 1521, 1925, 2083 |
| BspHI | TCATGA | 2 cut(s) | 97, 1224 |
| BspMAI | CTGCAG | 2 cut(s) | 904, 1605 |
| BspMI | ACCTGC | 1 cut(s) | 1057 |
| BspPI | GGATC | 2 cut(s) | 554, 2176 |
| BspT104I | TTCGAA | 1 cut(s) | 1151 |
| BspT107I | GGYRCC | 3 cut(s) | 1838, 1931, 2054 |
| BspTNI | GGTCTC | 2 cut(s) | 713, 1436 |
| BsrBI | CCGCTC | 6 cut(s) | 497, 922, 1240, 1480, 1546, 1609 |
| BsrDI | GCAATG | 2 cut(s) | 225, 693 |
| BsrFI | RCCGGY | 5 cut(s) | 596, 850, 878, 970, 1879 |
| BsrI | ACTGG | 2 cut(s) | 395, 787 |
| BssAI | RCCGGY | 5 cut(s) | 596, 850, 878, 970, 1879 |
| BssMI | GATC | 6 cut(s) | 360, 546, 1110, 2092, 2109, 2168 |
| BssNAI | GTATAC | 1 cut(s) | 510 |
| BssNI | GRCGYC | 2 cut(s) | 1382, 1839 |
| BssT1I | CCWWGG | 5 cut(s) | 115, 1395, 1426, 1491, 1620 |
| Bst1107I | GTATAC | 1 cut(s) | 510 |
| Bst2UI | CCWGG | 5 cut(s) | 155, 344, 439, 2030, 2166 |
| Bst4CI | ACNGT | 4 cut(s) | 231, 262, 982, 1159 |
| Bst6I | CTCTTC | 3 cut(s) | 519, 1083, 1256 |
| BstACI | GRCGYC | 2 cut(s) | 1382, 1839 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1214, 2138 |
| BstBAI | YACGTR | 2 cut(s) | 298, 2018 |
| BstBI | TTCGAA | 1 cut(s) | 1151 |
| BstDEI | CTNAG | 6 cut(s) | 332, 371, 782, 1412, 1671, 1706 |
| BstDSI | CCRYGG | 2 cut(s) | 1519, 1923 |
| BstEII | GGTNACC | 2 cut(s) | 1696, 2147 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1601 |
| BstF5I | GGATG | 7 cut(s) | 61, 489, 847, 930, 1105, 1963, 2056 |
| BstFNI | CGCG | 9 cut(s) | 522, 537, 669, 696, 698, 1300, 1521, 1925, 2083 |
| BstH2I | RGCGCY | 5 cut(s) | 307, 782, 900, 1049, 1842 |
| BstKTI | GATC | 6 cut(s) | 363, 549, 1113, 2095, 2112, 2171 |
| BstMAI | GTCTC | 7 cut(s) | 713, 764, 971, 1436, 1576, 1895, 2057 |
| BstMBI | GATC | 6 cut(s) | 360, 546, 1110, 2092, 2109, 2168 |
| BstMCI | CGRYCG | 3 cut(s) | 93, 1734, 2112 |
| BstNI | CCWGG | 5 cut(s) | 155, 344, 439, 2030, 2166 |
| BstNSI | RCATGY | 3 cut(s) | 202, 1372, 1825 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 758, 1907 |
| BstPI | GGTNACC | 2 cut(s) | 1696, 2147 |
| BstSFI | CTRYAG | 2 cut(s) | 900, 1601 |
| BstSLI | GKGCMC | 2 cut(s) | 1120, 1936 |
| BstUI | CGCG | 9 cut(s) | 522, 537, 669, 696, 698, 1300, 1521, 1925, 2083 |
| BstZ17I | GTATAC | 1 cut(s) | 510 |
| BstZI | CGGCCG | 2 cut(s) | 90, 1731 |
| Bsu15I | ATCGAT | 1 cut(s) | 68 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1706 |
| BsuTUI | ATCGAT | 1 cut(s) | 68 |
| BtgI | CCRYGG | 2 cut(s) | 1519, 1923 |
| BtgZI | GCGATG | 2 cut(s) | 1576, 1793 |
| BtsCI | GGATG | 7 cut(s) | 61, 489, 847, 930, 1105, 1963, 2056 |
| BtsIMutI | CAGTG | 1 cut(s) | 227 |
| BtuMI | TCGCGA | 1 cut(s) | 522 |
| BveI | ACCTGC | 1 cut(s) | 1057 |
| CaiI | CAGNNNCTG | 1 cut(s) | 757 |
| CciI | TCATGA | 2 cut(s) | 97, 1224 |
| CciNI | GCGGCCGC | 1 cut(s) | 1731 |
| Cfr10I | RCCGGY | 5 cut(s) | 596, 850, 878, 970, 1879 |
| Cfr42I | CCGCGG | 2 cut(s) | 1522, 1926 |
| Cfr9I | CCCGGG | 1 cut(s) | 2043 |
| ClaI | ATCGAT | 1 cut(s) | 68 |
| CseI | GACGC | 7 cut(s) | 339, 397, 763, 781, 1371, 1848, 2138 |
| Csp6I | GTAC | 4 cut(s) | 295, 727, 1722, 1890 |
| CspAI | ACCGGT | 1 cut(s) | 596 |
| CviAII | CATG | 7 cut(s) | 98, 199, 434, 724, 1225, 1369, 1822 |
| CviQI | GTAC | 4 cut(s) | 295, 727, 1722, 1890 |
| DdeI | CTNAG | 6 cut(s) | 332, 371, 782, 1412, 1671, 1706 |
| DinI | GGCGCC | 1 cut(s) | 1840 |
| DpnI | GATC | 6 cut(s) | 362, 548, 1112, 2094, 2111, 2170 |
| DpnII | GATC | 6 cut(s) | 360, 546, 1110, 2092, 2109, 2168 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1975 |
| DriI | GACNNNNNGTC | 1 cut(s) | 382 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1975 |
| EaeI | YGGCCR | 6 cut(s) | 90, 876, 1488, 1536, 1731, 1881 |
| EagI | CGGCCG | 2 cut(s) | 90, 1731 |
| Eam1104I | CTCTTC | 3 cut(s) | 519, 1083, 1256 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 382 |
| EarI | CTCTTC | 3 cut(s) | 519, 1083, 1256 |
| Ecl136II | GAGCTC | 1 cut(s) | 1411 |
| EclXI | CGGCCG | 2 cut(s) | 90, 1731 |
| Eco130I | CCWWGG | 5 cut(s) | 115, 1395, 1426, 1491, 1620 |
| Eco24I | GRGCYC | 4 cut(s) | 29, 1120, 1413, 1807 |
| Eco31I | GGTCTC | 2 cut(s) | 713, 1436 |
| Eco47I | GGWCC | 5 cut(s) | 399, 691, 1023, 1977, 2088 |
| Eco47III | AGCGCT | 1 cut(s) | 898 |
| Eco52I | CGGCCG | 2 cut(s) | 90, 1731 |
| Eco53kI | GAGCTC | 1 cut(s) | 1411 |
| Eco57I | CTGAAG | 3 cut(s) | 1312, 1734, 1847 |
| Eco72I | CACGTG | 1 cut(s) | 2018 |
| Eco81I | CCTNAGG | 1 cut(s) | 1706 |
| Eco88I | CYCGRG | 2 cut(s) | 767, 2043 |
| Eco91I | GGTNACC | 2 cut(s) | 1696, 2147 |
| EcoICRI | GAGCTC | 1 cut(s) | 1411 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1601 |
| EcoO109I | RGGNCCY | 4 cut(s) | 254, 399, 1116, 1977 |
| EcoO65I | GGTNACC | 2 cut(s) | 1696, 2147 |
| EcoRII | CCWGG | 5 cut(s) | 153, 342, 437, 2028, 2164 |
| EcoT14I | CCWWGG | 5 cut(s) | 115, 1395, 1426, 1491, 1620 |
| EcoT38I | GRGCYC | 4 cut(s) | 29, 1120, 1413, 1807 |
| EgeI | GGCGCC | 1 cut(s) | 1840 |
| EheI | GGCGCC | 1 cut(s) | 1840 |
| ErhI | CCWWGG | 5 cut(s) | 115, 1395, 1426, 1491, 1620 |
| Esp3I | CGTCTC | 1 cut(s) | 764 |
| FaeI | CATG | 7 cut(s) | 101, 202, 437, 727, 1228, 1372, 1825 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1379, 1411 |
| FaqI | GGGAC | 6 cut(s) | 389, 412, 513, 1371, 1562, 1963 |
| FatI | CATG | 7 cut(s) | 97, 198, 433, 723, 1224, 1368, 1821 |
| FblI | GTMKAC | 1 cut(s) | 509 |
| FokI | GGATG | 7 cut(s) | 68, 476, 854, 937, 1112, 1950, 2063 |
| FriOI | GRGCYC | 4 cut(s) | 29, 1120, 1413, 1807 |
| FspBI | CTAG | 6 cut(s) | 77, 1271, 1286, 1808, 2070, 2176 |
| GsaI | CCCAGC | 4 cut(s) | 751, 909, 1803, 1984 |
| GsuI | CTGGAG | 4 cut(s) | 737, 1070, 1418, 1706 |
| HaeII | RGCGCY | 5 cut(s) | 307, 782, 900, 1049, 1842 |
| HgaI | GACGC | 7 cut(s) | 339, 397, 763, 781, 1371, 1848, 2138 |
| Hin1I | GRCGYC | 2 cut(s) | 1382, 1839 |
| Hin1II | CATG | 7 cut(s) | 101, 202, 437, 727, 1228, 1372, 1825 |
| HincII | GTYRAC | 2 cut(s) | 763, 1072 |
| HindII | GTYRAC | 2 cut(s) | 763, 1072 |
| HphI | GGTGA | 8 cut(s) | 43, 848, 1027, 1120, 1247, 1514, 1687, 1703 |
| Hpy166II | GTNNAC | 5 cut(s) | 295, 328, 510, 763, 1072 |
| Hpy188III | TCNNGA | 8 cut(s) | 98, 364, 521, 716, 769, 1225, 1306, 1435 |
| Hpy8I | GTNNAC | 5 cut(s) | 295, 328, 510, 763, 1072 |
| Hpy99I | CGWCG | 5 cut(s) | 413, 1065, 1972, 2008, 2132 |
| HpyCH4III | ACNGT | 4 cut(s) | 231, 262, 982, 1159 |
| HpyCH4IV | ACGT | 5 cut(s) | 11, 297, 1060, 1533, 2017 |
| HpyF3I | CTNAG | 6 cut(s) | 332, 371, 782, 1412, 1671, 1706 |
| HpySE526I | ACGT | 5 cut(s) | 11, 297, 1060, 1533, 2017 |
| Hsp92I | GRCGYC | 2 cut(s) | 1382, 1839 |
| Hsp92II | CATG | 7 cut(s) | 101, 202, 437, 727, 1228, 1372, 1825 |
| KasI | GGCGCC | 1 cut(s) | 1838 |
| KflI | GGGWCCC | 1 cut(s) | 1977 |
| KroI | GCCGGC | 2 cut(s) | 878, 1879 |
| KroNI | GCCGGC | 2 cut(s) | 880, 1881 |
| KspI | CCGCGG | 2 cut(s) | 1522, 1926 |
| Kzo9I | GATC | 6 cut(s) | 360, 546, 1110, 2092, 2109, 2168 |
| LmnI | GCTCC | 8 cut(s) | 347, 919, 1000, 1150, 1183, 1408, 1582, 1606 |
| LweI | GCATC | 4 cut(s) | 74, 915, 1861, 2128 |
| MaeI | CTAG | 6 cut(s) | 77, 1271, 1286, 1808, 2070, 2176 |
| MaeII | ACGT | 5 cut(s) | 11, 297, 1060, 1533, 2017 |
| MaeIII | GTNAC | 8 cut(s) | 121, 653, 1015, 1502, 1696, 1860, 2013, 2147 |
| MalI | GATC | 6 cut(s) | 362, 548, 1112, 2094, 2111, 2170 |
| MbiI | CCGCTC | 6 cut(s) | 497, 922, 1240, 1480, 1546, 1609 |
| MboI | GATC | 6 cut(s) | 360, 546, 1110, 2092, 2109, 2168 |
| MboII | GAAGA | 6 cut(s) | 266, 536, 1100, 1141, 1243, 2147 |
| MfeI | CAATTG | 1 cut(s) | 1311 |
| MhlI | GDGCHC | 5 cut(s) | 29, 1120, 1413, 1807, 1936 |
| MlsI | TGGCCA | 2 cut(s) | 1490, 1538 |
| MluCI | AATT | 3 cut(s) | 164, 571, 1311 |
| MluNI | TGGCCA | 2 cut(s) | 1490, 1538 |
| Mly113I | GGCGCC | 1 cut(s) | 1839 |
| MlyI | GAGTC | 9 cut(s) | 371, 673, 1067, 1193, 1578, 1661, 1796, 2059, 2110 |
| MmeI | TCCRAC | 6 cut(s) | 456, 508, 610, 1560, 1986, 1991 |
| Mox20I | TGGCCA | 2 cut(s) | 1490, 1538 |
| MroNI | GCCGGC | 2 cut(s) | 878, 1879 |
| MroXI | GAANNNNTTC | 1 cut(s) | 273 |
| MscI | TGGCCA | 2 cut(s) | 1490, 1538 |
| MseI | TTAA | 3 cut(s) | 465, 471, 1770 |
| MslI | CAYNNNNRTG | 4 cut(s) | 834, 1373, 1640, 1820 |
| Msp20I | TGGCCA | 2 cut(s) | 1490, 1538 |
| MspA1I | CMGCKG | 9 cut(s) | 46, 622, 905, 1521, 1648, 1727, 1739, 1925, 1947 |
| MunI | CAATTG | 1 cut(s) | 1311 |
| Mva1269I | GAATGC | 1 cut(s) | 1748 |
| MvaI | CCWGG | 5 cut(s) | 155, 344, 439, 2030, 2166 |
| MvnI | CGCG | 9 cut(s) | 522, 537, 669, 696, 698, 1300, 1521, 1925, 2083 |
| NaeI | GCCGGC | 2 cut(s) | 880, 1881 |
| NarI | GGCGCC | 1 cut(s) | 1839 |
| NciI | CCSGG | 6 cut(s) | 24, 244, 651, 1033, 2044, 2045 |
| NdeII | GATC | 6 cut(s) | 360, 546, 1110, 2092, 2109, 2168 |
| NgoMIV | GCCGGC | 2 cut(s) | 878, 1879 |
| NlaIII | CATG | 7 cut(s) | 101, 202, 437, 727, 1228, 1372, 1825 |
| NmeAIII | GCCGAG | 3 cut(s) | 332, 757, 1108 |
| NmuCI | GTSAC | 5 cut(s) | 121, 1015, 1502, 1860, 2013 |
| NotI | GCGGCCGC | 1 cut(s) | 1731 |
| NruI | TCGCGA | 1 cut(s) | 522 |
| NspI | RCATGY | 3 cut(s) | 202, 1372, 1825 |
| NspV | TTCGAA | 1 cut(s) | 1151 |
| PaeR7I | CTCGAG | 1 cut(s) | 767 |
| PagI | TCATGA | 2 cut(s) | 97, 1224 |
| PciI | ACATGT | 2 cut(s) | 198, 1368 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 1304, 1371, 1539 |
| PctI | GAATGC | 1 cut(s) | 1748 |
| PdiI | GCCGGC | 2 cut(s) | 880, 1881 |
| PdmI | GAANNNNTTC | 1 cut(s) | 273 |
| PfeI | GAWTC | 3 cut(s) | 70, 367, 2025 |
| PflFI | GACNNNGTC | 1 cut(s) | 1786 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 154 |
| PinAI | ACCGGT | 1 cut(s) | 596 |
| Ple19I | CGATCG | 1 cut(s) | 2112 |
| PleI | GAGTC | 9 cut(s) | 371, 672, 1067, 1193, 1577, 1660, 1795, 2059, 2109 |
| PluTI | GGCGCC | 1 cut(s) | 1842 |
| PmaCI | CACGTG | 1 cut(s) | 2018 |
| PmlI | CACGTG | 1 cut(s) | 2018 |
| PpsI | GAGTC | 9 cut(s) | 371, 672, 1067, 1193, 1577, 1660, 1795, 2059, 2109 |
| Ppu21I | YACGTR | 2 cut(s) | 298, 2018 |
| PpuMI | RGGWCCY | 2 cut(s) | 399, 1977 |
| PscI | ACATGT | 2 cut(s) | 198, 1368 |
| PshAI | GACNNNNGTC | 2 cut(s) | 758, 1907 |
| Psp124BI | GAGCTC | 1 cut(s) | 1413 |
| Psp5II | RGGWCCY | 2 cut(s) | 399, 1977 |
| Psp6I | CCWGG | 5 cut(s) | 153, 342, 437, 2028, 2164 |
| PspCI | CACGTG | 1 cut(s) | 2018 |
| PspEI | GGTNACC | 2 cut(s) | 1696, 2147 |
| PspFI | CCCAGC | 4 cut(s) | 747, 905, 1799, 1980 |
| PspGI | CCWGG | 5 cut(s) | 153, 342, 437, 2028, 2164 |
| PspOMI | GGGCCC | 1 cut(s) | 1116 |
| PspPPI | RGGWCCY | 2 cut(s) | 399, 1977 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1205, 1237 |
| PstI | CTGCAG | 2 cut(s) | 904, 1605 |
| PstNI | CAGNNNCTG | 1 cut(s) | 757 |
| PsyI | GACNNNGTC | 1 cut(s) | 1786 |
| PvuI | CGATCG | 1 cut(s) | 2112 |
| PvuII | CAGCTG | 1 cut(s) | 905 |
| RruI | TCGCGA | 1 cut(s) | 522 |
| RsaI | GTAC | 4 cut(s) | 296, 728, 1723, 1891 |
| RsaNI | GTAC | 4 cut(s) | 295, 727, 1722, 1890 |
| RseI | CAYNNNNRTG | 4 cut(s) | 834, 1373, 1640, 1820 |
| SacI | GAGCTC | 1 cut(s) | 1413 |
| SacII | CCGCGG | 2 cut(s) | 1522, 1926 |
| SaqAI | TTAA | 3 cut(s) | 465, 471, 1770 |
| Sau3AI | GATC | 6 cut(s) | 360, 546, 1110, 2092, 2109, 2168 |
| SchI | GAGTC | 9 cut(s) | 371, 673, 1067, 1193, 1578, 1661, 1796, 2059, 2110 |
| SduI | GDGCHC | 5 cut(s) | 29, 1120, 1413, 1807, 1936 |
| SfaNI | GCATC | 4 cut(s) | 74, 915, 1861, 2128 |
| SfcI | CTRYAG | 2 cut(s) | 900, 1601 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 875 |
| SfoI | GGCGCC | 1 cut(s) | 1840 |
| Sfr274I | CTCGAG | 1 cut(s) | 767 |
| Sfr303I | CCGCGG | 2 cut(s) | 1522, 1926 |
| SfuI | TTCGAA | 1 cut(s) | 1151 |
| SgrBI | CCGCGG | 2 cut(s) | 1522, 1926 |
| SinI | GGWCC | 5 cut(s) | 399, 691, 1023, 1977, 2088 |
| SlaI | CTCGAG | 1 cut(s) | 767 |
| SmaI | CCCGGG | 1 cut(s) | 2045 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 834, 1373, 1640, 1820 |
| SmlI | CTYRAG | 1 cut(s) | 767 |
| SmoI | CTYRAG | 1 cut(s) | 767 |
| Sse9I | AATT | 3 cut(s) | 164, 571, 1311 |
| SspDI | GGCGCC | 1 cut(s) | 1838 |
| SspMI | CTAG | 6 cut(s) | 77, 1271, 1286, 1808, 2070, 2176 |
| SstI | GAGCTC | 1 cut(s) | 1413 |
| StyI | CCWWGG | 5 cut(s) | 115, 1395, 1426, 1491, 1620 |
| TaaI | ACNGT | 4 cut(s) | 231, 262, 982, 1159 |
| TaiI | ACGT | 5 cut(s) | 14, 300, 1063, 1536, 2020 |
| TaqII | GACCGA | 2 cut(s) | 170, 1799 |
| TasI | AATT | 3 cut(s) | 164, 571, 1311 |
| TfiI | GAWTC | 3 cut(s) | 70, 367, 2025 |
| Tru1I | TTAA | 3 cut(s) | 465, 471, 1770 |
| Tru9I | TTAA | 3 cut(s) | 465, 471, 1770 |
| TscAI | CASTG | 1 cut(s) | 234 |
| TseFI | GTSAC | 5 cut(s) | 121, 1015, 1502, 1860, 2013 |
| Tsp45I | GTSAC | 5 cut(s) | 121, 1015, 1502, 1860, 2013 |
| TspDTI | ATGAA | 5 cut(s) | 17, 86, 236, 1213, 1578 |
| TspGWI | ACGGA | 1 cut(s) | 1985 |
| TspMI | CCCGGG | 1 cut(s) | 2043 |
| TspRI | CASTG | 1 cut(s) | 234 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1786 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 154 |
| VpaK11BI | GGWCC | 5 cut(s) | 399, 691, 1023, 1977, 2088 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1601 |
| XapI | RAATTY | 1 cut(s) | 164 |
| XceI | RCATGY | 3 cut(s) | 202, 1372, 1825 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 830 |
| XhoI | CTCGAG | 1 cut(s) | 767 |
| XmaI | CCCGGG | 1 cut(s) | 2043 |
| XmiI | GTMKAC | 1 cut(s) | 509 |
| XmnI | GAANNNNTTC | 1 cut(s) | 273 |
| XspI | CTAG | 6 cut(s) | 77, 1271, 1286, 1808, 2070, 2176 |