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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 792, 1416 |
| Acc65I | GGTACC | 2 cut(s) | 1205, 1328 |
| AccB1I | GGYRCC | 4 cut(s) | 451, 1112, 1205, 1328 |
| AccBSI | CCGCTC | 4 cut(s) | 199, 541, 883, 1212 |
| AccI | GTMKAC | 1 cut(s) | 397 |
| AccII | CGCG | 5 cut(s) | 574, 795, 820, 843, 1357 |
| AclWI | GGATC | 1 cut(s) | 893 |
| AcoI | YGGCCR | 5 cut(s) | 153, 338, 762, 810, 1005 |
| AcuI | CTGAAG | 3 cut(s) | 966, 1008, 1121 |
| AcvI | CACGTG | 1 cut(s) | 1292 |
| AcyI | GRCGYC | 5 cut(s) | 452, 656, 789, 1113, 1413 |
| AfaI | GTAC | 5 cut(s) | 5, 997, 1165, 1207, 1330 |
| AflIII | ACRYGT | 1 cut(s) | 841 |
| AgsI | TTSAA | 4 cut(s) | 347, 1019, 1027, 1403 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1344 |
| AjnI | CCWGG | 1 cut(s) | 1302 |
| AleI | CACNNNNGTG | 1 cut(s) | 216 |
| AluBI | AGCT | 7 cut(s) | 419, 469, 606, 685, 802, 1157, 1199 |
| AluI | AGCT | 7 cut(s) | 419, 469, 606, 685, 802, 1157, 1199 |
| Alw21I | GWGCWC | 1 cut(s) | 687 |
| Alw26I | GTCTC | 5 cut(s) | 41, 710, 850, 1169, 1331 |
| AlwI | GGATC | 1 cut(s) | 893 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 34, 670 |
| Ama87I | CYCGRG | 4 cut(s) | 44, 1080, 1213, 1317 |
| ApaI | GGGCCC | 2 cut(s) | 394, 1081 |
| ApeKI | GCWGC | 5 cut(s) | 85, 664, 874, 919, 1001 |
| Asp718I | GGTACC | 2 cut(s) | 1205, 1328 |
| AspLEI | GCGC | 9 cut(s) | 58, 322, 454, 493, 576, 1115, 1235, 1312, 1357 |
| AsuC2I | CCSGG | 3 cut(s) | 307, 1318, 1319 |
| AsuHPI | GGTGA | 5 cut(s) | 49, 125, 301, 394, 977 |
| AvaI | CYCGRG | 4 cut(s) | 44, 1080, 1213, 1317 |
| AvaII | GGWCC | 4 cut(s) | 144, 297, 1251, 1362 |
| AxyI | CCTNAGG | 1 cut(s) | 980 |
| BaeGI | GKGCMC | 2 cut(s) | 394, 1081 |
| BalI | TGGCCA | 2 cut(s) | 764, 812 |
| BanI | GGYRCC | 4 cut(s) | 451, 1112, 1205, 1328 |
| BanII | GRGCYC | 3 cut(s) | 394, 687, 1081 |
| BbrPI | CACGTG | 1 cut(s) | 1292 |
| BbsI | GAAGAC | 1 cut(s) | 1055 |
| Bbv12I | GWGCWC | 1 cut(s) | 687 |
| BbvI | GCAGC | 5 cut(s) | 72, 676, 861, 931, 988 |
| BccI | CCATC | 6 cut(s) | 113, 114, 537, 821, 934, 1319 |
| BceAI | ACGGC | 6 cut(s) | 168, 443, 478, 583, 597, 770 |
| BciT130I | CCWGG | 1 cut(s) | 1304 |
| BcnI | CCSGG | 3 cut(s) | 307, 1318, 1319 |
| BcoDI | GTCTC | 5 cut(s) | 41, 710, 850, 1169, 1331 |
| BfmI | CTRYAG | 1 cut(s) | 875 |
| BfoI | RGCGCY | 4 cut(s) | 59, 323, 455, 1116 |
| BlpI | GCTNAGC | 1 cut(s) | 59 |
| Bme1390I | CCNGG | 4 cut(s) | 307, 1304, 1318, 1319 |
| Bme18I | GGWCC | 4 cut(s) | 144, 297, 1251, 1362 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1344 |
| BmeT110I | CYCGRG | 4 cut(s) | 44, 1080, 1213, 1317 |
| BmrFI | CCNGG | 4 cut(s) | 307, 1304, 1318, 1319 |
| BmrI | ACTGGG | 1 cut(s) | 1338 |
| BmsI | GCATC | 2 cut(s) | 81, 192 |
| BmuI | ACTGGG | 1 cut(s) | 1338 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1181 |
| BpiI | GAAGAC | 1 cut(s) | 1055 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 458, 490 |
| BpmI | CTGGAG | 4 cut(s) | 344, 692, 1221, 1325 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 59 |
| BpuMI | CCSGG | 3 cut(s) | 307, 1318, 1319 |
| BsaAI | YACGTR | 1 cut(s) | 1292 |
| BsaHI | GRCGYC | 5 cut(s) | 452, 656, 789, 1113, 1413 |
| BsaI | GGTCTC | 2 cut(s) | 710, 1331 |
| BsaJI | CCNNGG | 8 cut(s) | 9, 700, 765, 793, 894, 1059, 1317, 1417 |
| BsaWI | WCCGGW | 1 cut(s) | 76 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 360, 390 |
| Bse118I | RCCGGY | 4 cut(s) | 155, 244, 336, 340 |
| Bse1I | ACTGG | 4 cut(s) | 64, 281, 744, 1344 |
| Bse21I | CCTNAGG | 1 cut(s) | 980 |
| BseBI | CCWGG | 1 cut(s) | 1304 |
| BseDI | CCNNGG | 8 cut(s) | 9, 700, 765, 793, 894, 1059, 1317, 1417 |
| BseGI | GGATG | 5 cut(s) | 207, 259, 945, 1237, 1330 |
| BseMII | CTCAG | 3 cut(s) | 50, 971, 1149 |
| BseNI | ACTGG | 4 cut(s) | 64, 281, 744, 1344 |
| BseRI | GAGGAG | 2 cut(s) | 287, 386 |
| BseSI | GKGCMC | 2 cut(s) | 394, 1081 |
| BseX3I | CGGCCG | 3 cut(s) | 153, 338, 1005 |
| BseXI | GCAGC | 5 cut(s) | 72, 676, 861, 931, 988 |
| BseYI | CCCAGC | 5 cut(s) | 24, 958, 1073, 1195, 1254 |
| BsgI | GTGCAG | 2 cut(s) | 155, 938 |
| Bsh1236I | CGCG | 5 cut(s) | 574, 795, 820, 843, 1357 |
| Bsh1285I | CGRYCG | 3 cut(s) | 156, 341, 1008 |
| BshNI | GGYRCC | 4 cut(s) | 451, 1112, 1205, 1328 |
| BsiEI | CGRYCG | 3 cut(s) | 156, 341, 1008 |
| BsiHKAI | GWGCWC | 1 cut(s) | 687 |
| BsiHKCI | CYCGRG | 4 cut(s) | 44, 1080, 1213, 1317 |
| BsiSI | CCGG | 9 cut(s) | 77, 156, 245, 306, 337, 341, 1172, 1296, 1318 |
| BslFI | GGGAC | 3 cut(s) | 157, 836, 1237 |
| BsmAI | GTCTC | 5 cut(s) | 41, 710, 850, 1169, 1331 |
| BsmBI | CGTCTC | 2 cut(s) | 41, 850 |
| BsmFI | GGGAC | 3 cut(s) | 157, 836, 1237 |
| BsmI | GAATGC | 1 cut(s) | 1022 |
| Bso31I | GGTCTC | 2 cut(s) | 710, 1331 |
| BsoBI | CYCGRG | 4 cut(s) | 44, 1080, 1213, 1317 |
| Bsp120I | GGGCCC | 2 cut(s) | 390, 1077 |
| Bsp1286I | GDGCHC | 3 cut(s) | 394, 687, 1081 |
| Bsp143I | GATC | 4 cut(s) | 384, 864, 885, 1383 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 59 |
| BspCNI | CTCAG | 3 cut(s) | 51, 972, 1150 |
| BspFNI | CGCG | 5 cut(s) | 574, 795, 820, 843, 1357 |
| BspMAI | CTGCAG | 1 cut(s) | 879 |
| BspPI | GGATC | 1 cut(s) | 893 |
| BspT107I | GGYRCC | 4 cut(s) | 451, 1112, 1205, 1328 |
| BspTNI | GGTCTC | 2 cut(s) | 710, 1331 |
| BsrBI | CCGCTC | 4 cut(s) | 199, 541, 883, 1212 |
| BsrFI | RCCGGY | 4 cut(s) | 155, 244, 336, 340 |
| BsrI | ACTGG | 4 cut(s) | 64, 281, 744, 1344 |
| BssAI | RCCGGY | 4 cut(s) | 155, 244, 336, 340 |
| BssECI | CCNNGG | 8 cut(s) | 9, 700, 765, 793, 894, 1059, 1317, 1417 |
| BssMI | GATC | 4 cut(s) | 384, 864, 885, 1383 |
| BssNI | GRCGYC | 5 cut(s) | 452, 656, 789, 1113, 1413 |
| BssT1I | CCWWGG | 4 cut(s) | 700, 765, 894, 1417 |
| Bst2UI | CCWGG | 1 cut(s) | 1304 |
| Bst4CI | ACNGT | 2 cut(s) | 133, 433 |
| Bst6I | CTCTTC | 2 cut(s) | 357, 530 |
| BstACI | GRCGYC | 5 cut(s) | 452, 656, 789, 1113, 1413 |
| BstBAI | YACGTR | 1 cut(s) | 1292 |
| BstDEI | CTNAG | 3 cut(s) | 59, 980, 1158 |
| BstDSI | CCRYGG | 1 cut(s) | 793 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 674, 875 |
| BstF5I | GGATG | 5 cut(s) | 207, 259, 945, 1237, 1330 |
| BstFNI | CGCG | 5 cut(s) | 574, 795, 820, 843, 1357 |
| BstH2I | RGCGCY | 4 cut(s) | 59, 323, 455, 1116 |
| BstHHI | GCGC | 9 cut(s) | 58, 322, 454, 493, 576, 1115, 1235, 1312, 1357 |
| BstKTI | GATC | 4 cut(s) | 387, 867, 888, 1386 |
| BstMAI | GTCTC | 5 cut(s) | 41, 710, 850, 1169, 1331 |
| BstMBI | GATC | 4 cut(s) | 384, 864, 885, 1383 |
| BstMCI | CGRYCG | 3 cut(s) | 156, 341, 1008 |
| BstNI | CCWGG | 1 cut(s) | 1304 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1181 |
| BstSCI | CCNGG | 4 cut(s) | 305, 1302, 1316, 1317 |
| BstSFI | CTRYAG | 1 cut(s) | 875 |
| BstSLI | GKGCMC | 2 cut(s) | 394, 1081 |
| BstUI | CGCG | 5 cut(s) | 574, 795, 820, 843, 1357 |
| BstV1I | GCAGC | 5 cut(s) | 72, 676, 861, 931, 988 |
| BstV2I | GAAGAC | 1 cut(s) | 1055 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 218 |
| BstZI | CGGCCG | 3 cut(s) | 153, 338, 1005 |
| Bsu36I | CCTNAGG | 1 cut(s) | 980 |
| BtgI | CCRYGG | 1 cut(s) | 793 |
| BtsCI | GGATG | 5 cut(s) | 207, 259, 945, 1237, 1330 |
| BtsIMutI | CAGTG | 2 cut(s) | 288, 469 |
| CaiI | CAGNNNCTG | 2 cut(s) | 34, 670 |
| CciNI | GCGGCCGC | 1 cut(s) | 1005 |
| CfoI | GCGC | 9 cut(s) | 58, 322, 454, 493, 576, 1115, 1235, 1312, 1357 |
| Cfr10I | RCCGGY | 4 cut(s) | 155, 244, 336, 340 |
| Cfr42I | CCGCGG | 1 cut(s) | 796 |
| Cfr9I | CCCGGG | 1 cut(s) | 1317 |
| CseI | GACGC | 6 cut(s) | 40, 645, 832, 1060, 1122, 1154 |
| Csp6I | GTAC | 5 cut(s) | 4, 996, 1164, 1206, 1329 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 414, 449 |
| CviAII | CATG | 1 cut(s) | 638 |
| CviQI | GTAC | 5 cut(s) | 4, 996, 1164, 1206, 1329 |
| DdeI | CTNAG | 3 cut(s) | 59, 980, 1158 |
| DinI | GGCGCC | 2 cut(s) | 453, 1114 |
| DpnI | GATC | 4 cut(s) | 386, 866, 887, 1385 |
| DpnII | GATC | 4 cut(s) | 384, 864, 885, 1383 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1344 |
| EaeI | YGGCCR | 5 cut(s) | 153, 338, 762, 810, 1005 |
| EagI | CGGCCG | 3 cut(s) | 153, 338, 1005 |
| Eam1104I | CTCTTC | 2 cut(s) | 357, 530 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1344 |
| EarI | CTCTTC | 2 cut(s) | 357, 530 |
| EciI | GGCGGA | 6 cut(s) | 263, 737, 758, 785, 1052, 1337 |
| Ecl136II | GAGCTC | 1 cut(s) | 685 |
| EclXI | CGGCCG | 3 cut(s) | 153, 338, 1005 |
| Eco130I | CCWWGG | 4 cut(s) | 700, 765, 894, 1417 |
| Eco24I | GRGCYC | 3 cut(s) | 394, 687, 1081 |
| Eco31I | GGTCTC | 2 cut(s) | 710, 1331 |
| Eco47I | GGWCC | 4 cut(s) | 144, 297, 1251, 1362 |
| Eco52I | CGGCCG | 3 cut(s) | 153, 338, 1005 |
| Eco53kI | GAGCTC | 1 cut(s) | 685 |
| Eco57I | CTGAAG | 3 cut(s) | 966, 1008, 1121 |
| Eco72I | CACGTG | 1 cut(s) | 1292 |
| Eco81I | CCTNAGG | 1 cut(s) | 980 |
| Eco88I | CYCGRG | 4 cut(s) | 44, 1080, 1213, 1317 |
| EcoICRI | GAGCTC | 1 cut(s) | 685 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 674, 875 |
| EcoO109I | RGGNCCY | 4 cut(s) | 144, 390, 1077, 1251 |
| EcoRII | CCWGG | 1 cut(s) | 1302 |
| EcoT14I | CCWWGG | 4 cut(s) | 700, 765, 894, 1417 |
| EcoT38I | GRGCYC | 3 cut(s) | 394, 687, 1081 |
| EgeI | GGCGCC | 2 cut(s) | 453, 1114 |
| EheI | GGCGCC | 2 cut(s) | 453, 1114 |
| ErhI | CCWWGG | 4 cut(s) | 700, 765, 894, 1417 |
| Esp3I | CGTCTC | 2 cut(s) | 41, 850 |
| FaeI | CATG | 1 cut(s) | 641 |
| FaqI | GGGAC | 3 cut(s) | 157, 836, 1237 |
| FatI | CATG | 1 cut(s) | 637 |
| FblI | GTMKAC | 1 cut(s) | 397 |
| FokI | GGATG | 5 cut(s) | 214, 266, 952, 1224, 1337 |
| FriOI | GRGCYC | 3 cut(s) | 394, 687, 1081 |
| GlaI | GCGC | 9 cut(s) | 57, 321, 453, 492, 575, 1114, 1234, 1311, 1356 |
| GsaI | CCCAGC | 5 cut(s) | 28, 962, 1077, 1199, 1258 |
| GsuI | CTGGAG | 4 cut(s) | 344, 692, 1221, 1325 |
| HaeII | RGCGCY | 4 cut(s) | 59, 323, 455, 1116 |
| HapII | CCGG | 9 cut(s) | 77, 156, 245, 306, 337, 341, 1172, 1296, 1318 |
| HgaI | GACGC | 6 cut(s) | 40, 645, 832, 1060, 1122, 1154 |
| HhaI | GCGC | 9 cut(s) | 58, 322, 454, 493, 576, 1115, 1235, 1312, 1357 |
| Hin1I | GRCGYC | 5 cut(s) | 452, 656, 789, 1113, 1413 |
| Hin1II | CATG | 1 cut(s) | 641 |
| Hin6I | GCGC | 9 cut(s) | 56, 320, 452, 491, 574, 1113, 1233, 1310, 1355 |
| HinP1I | GCGC | 9 cut(s) | 56, 320, 452, 491, 574, 1113, 1233, 1310, 1355 |
| HincII | GTYRAC | 1 cut(s) | 398 |
| HindII | GTYRAC | 1 cut(s) | 398 |
| HinfI | GANTC | 6 cut(s) | 347, 473, 926, 1261, 1299, 1375 |
| HpaII | CCGG | 9 cut(s) | 77, 156, 245, 306, 337, 341, 1172, 1296, 1318 |
| HphI | GGTGA | 5 cut(s) | 49, 125, 301, 394, 977 |
| Hpy166II | GTNNAC | 3 cut(s) | 40, 398, 442 |
| Hpy188I | TCNGA | 6 cut(s) | 70, 554, 689, 1282, 1350, 1366 |
| Hpy188III | TCNNGA | 2 cut(s) | 353, 709 |
| Hpy8I | GTNNAC | 3 cut(s) | 40, 398, 442 |
| Hpy99I | CGWCG | 5 cut(s) | 133, 399, 583, 661, 1282 |
| HpyAV | CCTTC | 6 cut(s) | 187, 400, 983, 1063, 1102, 1241 |
| HpyCH4III | ACNGT | 2 cut(s) | 133, 433 |
| HpyCH4IV | ACGT | 5 cut(s) | 50, 789, 807, 1291, 1413 |
| HpyCH4V | TGCA | 5 cut(s) | 136, 241, 425, 877, 919 |
| HpyF3I | CTNAG | 3 cut(s) | 59, 980, 1158 |
| HpySE526I | ACGT | 5 cut(s) | 50, 789, 807, 1291, 1413 |
| Hsp92I | GRCGYC | 5 cut(s) | 452, 656, 789, 1113, 1413 |
| Hsp92II | CATG | 1 cut(s) | 641 |
| HspAI | GCGC | 9 cut(s) | 56, 320, 452, 491, 574, 1113, 1233, 1310, 1355 |
| KasI | GGCGCC | 2 cut(s) | 451, 1112 |
| KflI | GGGWCCC | 2 cut(s) | 144, 1251 |
| KpnI | GGTACC | 2 cut(s) | 1209, 1332 |
| KroI | GCCGGC | 2 cut(s) | 155, 336 |
| KroNI | GCCGGC | 2 cut(s) | 157, 338 |
| KspI | CCGCGG | 1 cut(s) | 796 |
| Kzo9I | GATC | 4 cut(s) | 384, 864, 885, 1383 |
| LmnI | GCTCC | 7 cut(s) | 196, 274, 424, 682, 690, 856, 880 |
| Lsp1109I | GCAGC | 5 cut(s) | 72, 676, 861, 931, 988 |
| LweI | GCATC | 2 cut(s) | 81, 192 |
| MaeII | ACGT | 5 cut(s) | 50, 789, 807, 1291, 1413 |
| MaeIII | GTNAC | 5 cut(s) | 262, 289, 776, 1134, 1287 |
| MalI | GATC | 4 cut(s) | 386, 866, 887, 1385 |
| MbiI | CCGCTC | 4 cut(s) | 199, 541, 883, 1212 |
| MboI | GATC | 4 cut(s) | 384, 864, 885, 1383 |
| MboII | GAAGA | 6 cut(s) | 128, 374, 415, 517, 704, 1060 |
| MfeI | CAATTG | 1 cut(s) | 585 |
| MhlI | GDGCHC | 3 cut(s) | 394, 687, 1081 |
| MlsI | TGGCCA | 2 cut(s) | 764, 812 |
| MluCI | AATT | 1 cut(s) | 585 |
| MluI | ACGCGT | 1 cut(s) | 841 |
| MluNI | TGGCCA | 2 cut(s) | 764, 812 |
| Mly113I | GGCGCC | 2 cut(s) | 452, 1113 |
| MlyI | GAGTC | 4 cut(s) | 467, 935, 1255, 1384 |
| MmeI | TCCRAC | 5 cut(s) | 834, 1260, 1265, 1373, 1389 |
| Mox20I | TGGCCA | 2 cut(s) | 764, 812 |
| MroNI | GCCGGC | 2 cut(s) | 155, 336 |
| MscI | TGGCCA | 2 cut(s) | 764, 812 |
| MseI | TTAA | 1 cut(s) | 1044 |
| MslI | CAYNNNNRTG | 3 cut(s) | 111, 216, 914 |
| Msp20I | TGGCCA | 2 cut(s) | 764, 812 |
| MspA1I | CMGCKG | 6 cut(s) | 795, 922, 1001, 1013, 1157, 1199 |
| MspI | CCGG | 9 cut(s) | 77, 156, 245, 306, 337, 341, 1172, 1296, 1318 |
| MspR9I | CCNGG | 4 cut(s) | 307, 1304, 1318, 1319 |
| MunI | CAATTG | 1 cut(s) | 585 |
| Mva1269I | GAATGC | 1 cut(s) | 1022 |
| MvaI | CCWGG | 1 cut(s) | 1304 |
| MvnI | CGCG | 5 cut(s) | 574, 795, 820, 843, 1357 |
| NaeI | GCCGGC | 2 cut(s) | 157, 338 |
| NarI | GGCGCC | 2 cut(s) | 452, 1113 |
| NciI | CCSGG | 3 cut(s) | 307, 1318, 1319 |
| NdeII | GATC | 4 cut(s) | 384, 864, 885, 1383 |
| NgoMIV | GCCGGC | 2 cut(s) | 155, 336 |
| NlaIII | CATG | 1 cut(s) | 641 |
| NmeAIII | GCCGAG | 2 cut(s) | 34, 587 |
| NmuCI | GTSAC | 5 cut(s) | 262, 289, 776, 1134, 1287 |
| NotI | GCGGCCGC | 1 cut(s) | 1005 |
| OliI | CACNNNNGTG | 1 cut(s) | 216 |
| PctI | GAATGC | 1 cut(s) | 1022 |
| PdiI | GCCGGC | 2 cut(s) | 157, 338 |
| PfeI | GAWTC | 2 cut(s) | 347, 1299 |
| PfoI | TCCNGGA | 1 cut(s) | 1302 |
| PleI | GAGTC | 4 cut(s) | 467, 934, 1255, 1383 |
| PluTI | GGCGCC | 2 cut(s) | 455, 1116 |
| PmaCI | CACGTG | 1 cut(s) | 1292 |
| PmlI | CACGTG | 1 cut(s) | 1292 |
| PpsI | GAGTC | 4 cut(s) | 467, 934, 1255, 1383 |
| Ppu21I | YACGTR | 1 cut(s) | 1292 |
| PpuMI | RGGWCCY | 2 cut(s) | 144, 1251 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1181 |
| Psp124BI | GAGCTC | 1 cut(s) | 687 |
| Psp5II | RGGWCCY | 2 cut(s) | 144, 1251 |
| Psp6I | CCWGG | 1 cut(s) | 1302 |
| PspCI | CACGTG | 1 cut(s) | 1292 |
| PspFI | CCCAGC | 5 cut(s) | 24, 958, 1073, 1195, 1254 |
| PspGI | CCWGG | 1 cut(s) | 1302 |
| PspOMI | GGGCCC | 2 cut(s) | 390, 1077 |
| PspPPI | RGGWCCY | 2 cut(s) | 144, 1251 |
| PstI | CTGCAG | 1 cut(s) | 879 |
| PstNI | CAGNNNCTG | 2 cut(s) | 34, 670 |
| PvuII | CAGCTG | 2 cut(s) | 1157, 1199 |
| RsaI | GTAC | 5 cut(s) | 5, 997, 1165, 1207, 1330 |
| RsaNI | GTAC | 5 cut(s) | 4, 996, 1164, 1206, 1329 |
| RseI | CAYNNNNRTG | 3 cut(s) | 111, 216, 914 |
| SacI | GAGCTC | 1 cut(s) | 687 |
| SacII | CCGCGG | 1 cut(s) | 796 |
| SalI | GTCGAC | 1 cut(s) | 396 |
| SaqAI | TTAA | 1 cut(s) | 1044 |
| Sau3AI | GATC | 4 cut(s) | 384, 864, 885, 1383 |
| SchI | GAGTC | 4 cut(s) | 467, 935, 1255, 1384 |
| ScrFI | CCNGG | 4 cut(s) | 307, 1304, 1318, 1319 |
| SduI | GDGCHC | 3 cut(s) | 394, 687, 1081 |
| SfaNI | GCATC | 2 cut(s) | 81, 192 |
| SfcI | CTRYAG | 1 cut(s) | 875 |
| SfoI | GGCGCC | 2 cut(s) | 453, 1114 |
| Sfr303I | CCGCGG | 1 cut(s) | 796 |
| SgrBI | CCGCGG | 1 cut(s) | 796 |
| SinI | GGWCC | 4 cut(s) | 144, 297, 1251, 1362 |
| SmaI | CCCGGG | 1 cut(s) | 1319 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 111, 216, 914 |
| Sse9I | AATT | 1 cut(s) | 585 |
| SspDI | GGCGCC | 2 cut(s) | 451, 1112 |
| SstI | GAGCTC | 1 cut(s) | 687 |
| StyD4I | CCNGG | 4 cut(s) | 305, 1302, 1316, 1317 |
| StyI | CCWWGG | 4 cut(s) | 700, 765, 894, 1417 |
| TaaI | ACNGT | 2 cut(s) | 133, 433 |
| TaiI | ACGT | 5 cut(s) | 53, 792, 810, 1294, 1416 |
| TaqI | TCGA | 3 cut(s) | 397, 659, 1378 |
| TasI | AATT | 1 cut(s) | 585 |
| TfiI | GAWTC | 2 cut(s) | 347, 1299 |
| Tru1I | TTAA | 1 cut(s) | 1044 |
| Tru9I | TTAA | 1 cut(s) | 1044 |
| TscAI | CASTG | 2 cut(s) | 288, 469 |
| TseFI | GTSAC | 5 cut(s) | 262, 289, 776, 1134, 1287 |
| TseI | GCWGC | 5 cut(s) | 85, 664, 874, 919, 1001 |
| Tsp45I | GTSAC | 5 cut(s) | 262, 289, 776, 1134, 1287 |
| TspDTI | ATGAA | 1 cut(s) | 852 |
| TspGWI | ACGGA | 2 cut(s) | 459, 1259 |
| TspMI | CCCGGG | 1 cut(s) | 1317 |
| TspRI | CASTG | 2 cut(s) | 288, 469 |
| VpaK11BI | GGWCC | 4 cut(s) | 144, 297, 1251, 1362 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 674, 875 |
| XmaI | CCCGGG | 1 cut(s) | 1317 |
| XmiI | GTMKAC | 1 cut(s) | 397 |
| ZraI | GACGTC | 2 cut(s) | 790, 1414 |