B-Box-type zinc finger
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-B_box | PF00643 | 2 - 47 | 1.3e-06 | B-box zinc finger |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 168 |
| AccB1I | GGYRCC | 1 cut(s) | 168 |
| AccBSI | CCGCTC | 3 cut(s) | 41, 139, 467 |
| AccI | GTMKAC | 1 cut(s) | 653 |
| AccII | CGCG | 1 cut(s) | 36 |
| AccIII | TCCGGA | 1 cut(s) | 239 |
| AclWI | GGATC | 2 cut(s) | 15, 318 |
| AcoI | YGGCCR | 1 cut(s) | 714 |
| AcsI | RAATTY | 2 cut(s) | 630, 664 |
| AfaI | GTAC | 3 cut(s) | 170, 395, 475 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 165, 179, 577 |
| AflIII | ACRYGT | 1 cut(s) | 656 |
| AjiI | CACGTC | 2 cut(s) | 127, 657 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 695, 727 |
| AluBI | AGCT | 5 cut(s) | 22, 366, 499, 706, 730 |
| AluI | AGCT | 5 cut(s) | 22, 366, 499, 706, 730 |
| Alw21I | GWGCWC | 2 cut(s) | 24, 368 |
| Alw26I | GTCTC | 2 cut(s) | 237, 385 |
| AlwI | GGATC | 2 cut(s) | 15, 318 |
| Aor13HI | TCCGGA | 1 cut(s) | 239 |
| AoxI | GGCC | 3 cut(s) | 567, 714, 761 |
| ApeKI | GCWGC | 3 cut(s) | 81, 574, 605 |
| ApoI | RAATTY | 2 cut(s) | 630, 664 |
| Asp718I | GGTACC | 1 cut(s) | 168 |
| AspLEI | GCGC | 5 cut(s) | 38, 53, 104, 299, 601 |
| AspS9I | GGNCC | 1 cut(s) | 568 |
| AsuC2I | CCSGG | 3 cut(s) | 166, 571, 579 |
| AsuHPI | GGTGA | 2 cut(s) | 527, 712 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 465, 498 |
| BanI | GGYRCC | 1 cut(s) | 168 |
| BanII | GRGCYC | 3 cut(s) | 24, 368, 392 |
| Bbv12I | GWGCWC | 2 cut(s) | 24, 368 |
| BbvI | GCAGC | 3 cut(s) | 68, 561, 592 |
| BccI | CCATC | 2 cut(s) | 179, 182 |
| BceAI | ACGGC | 2 cut(s) | 509, 701 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 142, 176 |
| BclI | TGATCA | 1 cut(s) | 199 |
| BcnI | CCSGG | 3 cut(s) | 166, 571, 579 |
| BcoDI | GTCTC | 2 cut(s) | 237, 385 |
| BfaI | CTAG | 3 cut(s) | 90, 417, 462 |
| BfoI | RGCGCY | 2 cut(s) | 105, 602 |
| BisI | GCNGC | 5 cut(s) | 39, 82, 137, 575, 606 |
| BlsI | GCNGC | 5 cut(s) | 40, 83, 138, 576, 607 |
| Bme1390I | CCNGG | 3 cut(s) | 166, 571, 579 |
| BmgBI | CACGTC | 2 cut(s) | 127, 657 |
| BmgT120I | GGNCC | 1 cut(s) | 568 |
| BmiI | GGNNCC | 1 cut(s) | 170 |
| BmrFI | CCNGG | 3 cut(s) | 166, 571, 579 |
| BmsI | GCATC | 1 cut(s) | 712 |
| BoxI | GACNNNNGTC | 1 cut(s) | 377 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 585, 617 |
| BpmI | CTGGAG | 1 cut(s) | 286 |
| BpuMI | CCSGG | 3 cut(s) | 166, 571, 579 |
| BsaJI | CCNNGG | 2 cut(s) | 350, 384 |
| BsaWI | WCCGGW | 1 cut(s) | 239 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 38, 68, 161, 191, 684, 714 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 165, 179, 577 |
| Bse118I | RCCGGY | 1 cut(s) | 697 |
| Bse1I | ACTGG | 1 cut(s) | 491 |
| BseAI | TCCGGA | 1 cut(s) | 239 |
| BseDI | CCNNGG | 2 cut(s) | 350, 384 |
| BseGI | GGATG | 1 cut(s) | 18 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 165, 179, 577 |
| BseMII | CTCAG | 2 cut(s) | 381, 734 |
| BseNI | ACTGG | 1 cut(s) | 491 |
| BseRI | GAGGAG | 4 cut(s) | 442, 463, 695, 766 |
| BseXI | GCAGC | 3 cut(s) | 68, 561, 592 |
| Bsh1236I | CGCG | 1 cut(s) | 36 |
| BshFI | GGCC | 3 cut(s) | 569, 716, 763 |
| BshNI | GGYRCC | 1 cut(s) | 168 |
| BsiHKAI | GWGCWC | 2 cut(s) | 24, 368 |
| BsiSI | CCGG | 9 cut(s) | 165, 180, 227, 240, 401, 571, 578, 698, 764 |
| BsiWI | CGTACG | 1 cut(s) | 393 |
| BslFI | GGGAC | 2 cut(s) | 256, 653 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 165, 179, 577 |
| BsmAI | GTCTC | 2 cut(s) | 237, 385 |
| BsmBI | CGTCTC | 1 cut(s) | 237 |
| BsmFI | GGGAC | 2 cut(s) | 256, 653 |
| BsmI | GAATGC | 1 cut(s) | 441 |
| BsnI | GGCC | 3 cut(s) | 569, 716, 763 |
| Bsp1286I | GDGCHC | 3 cut(s) | 24, 368, 392 |
| Bsp13I | TCCGGA | 1 cut(s) | 239 |
| Bsp143I | GATC | 4 cut(s) | 7, 199, 310, 356 |
| BspANI | GGCC | 3 cut(s) | 569, 716, 763 |
| BspCNI | CTCAG | 2 cut(s) | 380, 735 |
| BspEI | TCCGGA | 1 cut(s) | 239 |
| BspFNI | CGCG | 1 cut(s) | 36 |
| BspLI | GGNNCC | 1 cut(s) | 170 |
| BspPI | GGATC | 2 cut(s) | 15, 318 |
| BspT107I | GGYRCC | 1 cut(s) | 168 |
| BsrBI | CCGCTC | 3 cut(s) | 41, 139, 467 |
| BsrFI | RCCGGY | 1 cut(s) | 697 |
| BsrI | ACTGG | 1 cut(s) | 491 |
| BssAI | RCCGGY | 1 cut(s) | 697 |
| BssECI | CCNNGG | 2 cut(s) | 350, 384 |
| BssMI | GATC | 4 cut(s) | 7, 199, 310, 356 |
| BssT1I | CCWWGG | 2 cut(s) | 350, 384 |
| BstC8I | GCNNGC | 5 cut(s) | 20, 121, 134, 295, 603 |
| BstDEI | CTNAG | 2 cut(s) | 367, 743 |
| BstF5I | GGATG | 1 cut(s) | 18 |
| BstFNI | CGCG | 1 cut(s) | 36 |
| BstH2I | RGCGCY | 2 cut(s) | 105, 602 |
| BstHHI | GCGC | 5 cut(s) | 38, 53, 104, 299, 601 |
| BstKTI | GATC | 4 cut(s) | 10, 202, 313, 359 |
| BstMAI | GTCTC | 2 cut(s) | 237, 385 |
| BstMBI | GATC | 4 cut(s) | 7, 199, 310, 356 |
| BstNSI | RCATGY | 1 cut(s) | 297 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 377 |
| BstSCI | CCNGG | 3 cut(s) | 164, 569, 577 |
| BstUI | CGCG | 1 cut(s) | 36 |
| BstV1I | GCAGC | 3 cut(s) | 68, 561, 592 |
| BsuRI | GGCC | 3 cut(s) | 569, 716, 763 |
| BtgZI | GCGATG | 1 cut(s) | 198 |
| BtrI | CACGTC | 2 cut(s) | 127, 657 |
| BtsCI | GGATG | 1 cut(s) | 18 |
| BtsIMutI | CAGTG | 1 cut(s) | 375 |
| Cac8I | GCNNGC | 5 cut(s) | 20, 121, 134, 295, 603 |
| CfoI | GCGC | 5 cut(s) | 38, 53, 104, 299, 601 |
| Cfr10I | RCCGGY | 1 cut(s) | 697 |
| Cfr13I | GGNCC | 1 cut(s) | 568 |
| CseI | GACGC | 2 cut(s) | 467, 597 |
| Csp6I | GTAC | 3 cut(s) | 169, 394, 474 |
| CviAII | CATG | 2 cut(s) | 294, 548 |
| CviQI | GTAC | 3 cut(s) | 169, 394, 474 |
| DdeI | CTNAG | 2 cut(s) | 367, 743 |
| DpnI | GATC | 4 cut(s) | 9, 201, 312, 358 |
| DpnII | GATC | 4 cut(s) | 7, 199, 310, 356 |
| EaeI | YGGCCR | 1 cut(s) | 714 |
| EciI | GGCGGA | 3 cut(s) | 52, 119, 511 |
| Ecl136II | GAGCTC | 2 cut(s) | 22, 366 |
| Eco130I | CCWWGG | 2 cut(s) | 350, 384 |
| Eco24I | GRGCYC | 3 cut(s) | 24, 368, 392 |
| Eco32I | GATATC | 1 cut(s) | 687 |
| Eco53kI | GAGCTC | 2 cut(s) | 22, 366 |
| EcoICRI | GAGCTC | 2 cut(s) | 22, 366 |
| EcoRV | GATATC | 1 cut(s) | 687 |
| EcoT14I | CCWWGG | 2 cut(s) | 350, 384 |
| EcoT38I | GRGCYC | 3 cut(s) | 24, 368, 392 |
| ErhI | CCWWGG | 2 cut(s) | 350, 384 |
| Esp3I | CGTCTC | 1 cut(s) | 237 |
| FaeI | CATG | 2 cut(s) | 297, 551 |
| FaiI | YATR | 5 cut(s) | 99, 295, 425, 506, 549 |
| FaqI | GGGAC | 2 cut(s) | 256, 653 |
| FatI | CATG | 2 cut(s) | 293, 547 |
| FauI | CCCGC | 1 cut(s) | 629 |
| FbaI | TGATCA | 1 cut(s) | 199 |
| FblI | GTMKAC | 1 cut(s) | 653 |
| Fnu4HI | GCNGC | 5 cut(s) | 39, 82, 137, 575, 606 |
| FokI | GGATG | 1 cut(s) | 25 |
| FriOI | GRGCYC | 3 cut(s) | 24, 368, 392 |
| Fsp4HI | GCNGC | 5 cut(s) | 39, 82, 137, 575, 606 |
| FspBI | CTAG | 3 cut(s) | 90, 417, 462 |
| GlaI | GCGC | 5 cut(s) | 37, 52, 103, 298, 600 |
| GluI | GCNGC | 5 cut(s) | 39, 82, 137, 575, 606 |
| GsuI | CTGGAG | 1 cut(s) | 286 |
| HaeII | RGCGCY | 2 cut(s) | 105, 602 |
| HaeIII | GGCC | 3 cut(s) | 569, 716, 763 |
| HapII | CCGG | 9 cut(s) | 165, 180, 227, 240, 401, 571, 578, 698, 764 |
| HgaI | GACGC | 2 cut(s) | 467, 597 |
| HhaI | GCGC | 5 cut(s) | 38, 53, 104, 299, 601 |
| Hin1II | CATG | 2 cut(s) | 297, 551 |
| Hin6I | GCGC | 5 cut(s) | 36, 51, 102, 297, 599 |
| HinP1I | GCGC | 5 cut(s) | 36, 51, 102, 297, 599 |
| HincII | GTYRAC | 1 cut(s) | 654 |
| HindII | GTYRAC | 1 cut(s) | 654 |
| HindIII | AAGCTT | 1 cut(s) | 497 |
| HinfI | GANTC | 6 cut(s) | 59, 86, 254, 278, 408, 518 |
| HpaII | CCGG | 9 cut(s) | 165, 180, 227, 240, 401, 571, 578, 698, 764 |
| HphI | GGTGA | 2 cut(s) | 527, 712 |
| Hpy166II | GTNNAC | 2 cut(s) | 484, 654 |
| Hpy188I | TCNGA | 4 cut(s) | 12, 58, 663, 734 |
| Hpy188III | TCNNGA | 2 cut(s) | 240, 690 |
| Hpy8I | GTNNAC | 2 cut(s) | 484, 654 |
| Hpy99I | CGWCG | 9 cut(s) | 119, 271, 328, 337, 461, 530, 541, 613, 658 |
| HpyAV | CCTTC | 2 cut(s) | 76, 666 |
| HpyCH4IV | ACGT | 3 cut(s) | 126, 396, 656 |
| HpyCH4V | TGCA | 5 cut(s) | 153, 293, 439, 492, 725 |
| HpyF3I | CTNAG | 2 cut(s) | 367, 743 |
| HpySE526I | ACGT | 3 cut(s) | 126, 396, 656 |
| Hsp92II | CATG | 2 cut(s) | 297, 551 |
| HspAI | GCGC | 5 cut(s) | 36, 51, 102, 297, 599 |
| Kpn2I | TCCGGA | 1 cut(s) | 239 |
| KpnI | GGTACC | 1 cut(s) | 172 |
| Ksp22I | TGATCA | 1 cut(s) | 199 |
| Kzo9I | GATC | 4 cut(s) | 7, 199, 310, 356 |
| LmnI | GCTCC | 2 cut(s) | 149, 363 |
| Lsp1109I | GCAGC | 3 cut(s) | 68, 561, 592 |
| LweI | GCATC | 1 cut(s) | 712 |
| MaeI | CTAG | 3 cut(s) | 90, 417, 462 |
| MaeII | ACGT | 3 cut(s) | 126, 396, 656 |
| MaeIII | GTNAC | 1 cut(s) | 370 |
| MalI | GATC | 4 cut(s) | 9, 201, 312, 358 |
| MbiI | CCGCTC | 3 cut(s) | 41, 139, 467 |
| MboI | GATC | 4 cut(s) | 7, 199, 310, 356 |
| MboII | GAAGA | 1 cut(s) | 444 |
| MhlI | GDGCHC | 3 cut(s) | 24, 368, 392 |
| MluCI | AATT | 2 cut(s) | 630, 664 |
| MlyI | GAGTC | 2 cut(s) | 53, 80 |
| MmeI | TCCRAC | 2 cut(s) | 81, 171 |
| MroI | TCCGGA | 1 cut(s) | 239 |
| MseI | TTAA | 1 cut(s) | 590 |
| MspI | CCGG | 9 cut(s) | 165, 180, 227, 240, 401, 571, 578, 698, 764 |
| MspR9I | CCNGG | 3 cut(s) | 166, 571, 579 |
| Mva1269I | GAATGC | 1 cut(s) | 441 |
| MvnI | CGCG | 1 cut(s) | 36 |
| NciI | CCSGG | 3 cut(s) | 166, 571, 579 |
| NdeII | GATC | 4 cut(s) | 7, 199, 310, 356 |
| NlaIII | CATG | 2 cut(s) | 297, 551 |
| NlaIV | GGNNCC | 1 cut(s) | 170 |
| NmuCI | GTSAC | 1 cut(s) | 370 |
| NspI | RCATGY | 1 cut(s) | 297 |
| PaeI | GCATGC | 1 cut(s) | 297 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 123, 263 |
| PctI | GAATGC | 1 cut(s) | 441 |
| PfeI | GAWTC | 4 cut(s) | 254, 278, 408, 518 |
| Pfl23II | CGTACG | 1 cut(s) | 393 |
| PkrI | GCNGC | 5 cut(s) | 40, 83, 138, 576, 607 |
| PleI | GAGTC | 2 cut(s) | 53, 80 |
| PpsI | GAGTC | 2 cut(s) | 53, 80 |
| PshAI | GACNNNNGTC | 1 cut(s) | 377 |
| Psp124BI | GAGCTC | 2 cut(s) | 24, 368 |
| PspLI | CGTACG | 1 cut(s) | 393 |
| PspN4I | GGNNCC | 1 cut(s) | 170 |
| PspPI | GGNCC | 1 cut(s) | 568 |
| RsaI | GTAC | 3 cut(s) | 170, 395, 475 |
| RsaNI | GTAC | 3 cut(s) | 169, 394, 474 |
| SacI | GAGCTC | 2 cut(s) | 24, 368 |
| SalI | GTCGAC | 1 cut(s) | 652 |
| SaqAI | TTAA | 1 cut(s) | 590 |
| SatI | GCNGC | 5 cut(s) | 39, 82, 137, 575, 606 |
| Sau3AI | GATC | 4 cut(s) | 7, 199, 310, 356 |
| Sau96I | GGNCC | 1 cut(s) | 568 |
| SchI | GAGTC | 2 cut(s) | 53, 80 |
| ScrFI | CCNGG | 3 cut(s) | 166, 571, 579 |
| SduI | GDGCHC | 3 cut(s) | 24, 368, 392 |
| SfaNI | GCATC | 1 cut(s) | 712 |
| SphI | GCATGC | 1 cut(s) | 297 |
| Sse9I | AATT | 2 cut(s) | 630, 664 |
| SspMI | CTAG | 3 cut(s) | 90, 417, 462 |
| SstI | GAGCTC | 2 cut(s) | 24, 368 |
| StyD4I | CCNGG | 3 cut(s) | 164, 569, 577 |
| StyI | CCWWGG | 2 cut(s) | 350, 384 |
| TaiI | ACGT | 3 cut(s) | 129, 399, 659 |
| TaqI | TCGA | 1 cut(s) | 653 |
| TasI | AATT | 2 cut(s) | 630, 664 |
| TauI | GCSGC | 2 cut(s) | 41, 139 |
| TfiI | GAWTC | 4 cut(s) | 254, 278, 408, 518 |
| Tru1I | TTAA | 1 cut(s) | 590 |
| Tru9I | TTAA | 1 cut(s) | 590 |
| TscAI | CASTG | 1 cut(s) | 375 |
| TseFI | GTSAC | 1 cut(s) | 370 |
| TseI | GCWGC | 3 cut(s) | 81, 574, 605 |
| Tsp45I | GTSAC | 1 cut(s) | 370 |
| TspDTI | ATGAA | 2 cut(s) | 17, 86 |
| TspGWI | ACGGA | 2 cut(s) | 323, 389 |
| TspRI | CASTG | 1 cut(s) | 375 |
| XapI | RAATTY | 2 cut(s) | 630, 664 |
| XceI | RCATGY | 1 cut(s) | 297 |
| XmiI | GTMKAC | 1 cut(s) | 653 |
| XspI | CTAG | 3 cut(s) | 90, 417, 462 |