gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 78 |
| AcsI | RAATTY | 1 cut(s) | 102 |
| AfaI | GTAC | 1 cut(s) | 254 |
| AflII | CTTAAG | 1 cut(s) | 89 |
| AflIII | ACRYGT | 1 cut(s) | 221 |
| AgsI | TTSAA | 1 cut(s) | 296 |
| AjiI | CACGTC | 1 cut(s) | 224 |
| AluBI | AGCT | 2 cut(s) | 155, 179 |
| AluI | AGCT | 2 cut(s) | 155, 179 |
| Alw26I | GTCTC | 1 cut(s) | 32 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 50 |
| ApeKI | GCWGC | 2 cut(s) | 155, 158 |
| ApoI | RAATTY | 1 cut(s) | 102 |
| AspS9I | GGNCC | 1 cut(s) | 268 |
| AvaII | GGWCC | 1 cut(s) | 268 |
| BbvI | GCAGC | 2 cut(s) | 142, 145 |
| BciVI | GTATCC | 1 cut(s) | 103 |
| BcoDI | GTCTC | 1 cut(s) | 32 |
| BfaI | CTAG | 2 cut(s) | 126, 147 |
| BfrI | CTTAAG | 1 cut(s) | 89 |
| BfuI | GTATCC | 1 cut(s) | 103 |
| BisI | GCNGC | 2 cut(s) | 156, 159 |
| BlsI | GCNGC | 2 cut(s) | 157, 160 |
| Bme18I | GGWCC | 1 cut(s) | 268 |
| BmgBI | CACGTC | 1 cut(s) | 224 |
| BmgT120I | GGNCC | 1 cut(s) | 268 |
| BmiI | GGNNCC | 1 cut(s) | 270 |
| BmsI | GCATC | 1 cut(s) | 94 |
| BpmI | CTGGAG | 1 cut(s) | 56 |
| BpuEI | CTTGAG | 1 cut(s) | 81 |
| Bse1I | ACTGG | 1 cut(s) | 39 |
| BseNI | ACTGG | 1 cut(s) | 39 |
| BseXI | GCAGC | 2 cut(s) | 142, 145 |
| BsmAI | GTCTC | 1 cut(s) | 32 |
| BspHI | TCATGA | 1 cut(s) | 216 |
| BspLI | GGNNCC | 1 cut(s) | 270 |
| BspTI | CTTAAG | 1 cut(s) | 89 |
| BsrI | ACTGG | 1 cut(s) | 39 |
| Bst6I | CTCTTC | 1 cut(s) | 258 |
| BstAFI | CTTAAG | 1 cut(s) | 89 |
| BstMAI | GTCTC | 1 cut(s) | 32 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 167, 176, 197 |
| BstV1I | GCAGC | 2 cut(s) | 142, 145 |
| BsuI | GTATCC | 1 cut(s) | 103 |
| BtrI | CACGTC | 1 cut(s) | 224 |
| BtsIMutI | CAGTG | 1 cut(s) | 32 |
| CaiI | CAGNNNCTG | 1 cut(s) | 50 |
| CciI | TCATGA | 1 cut(s) | 216 |
| Cfr13I | GGNCC | 1 cut(s) | 268 |
| Csp6I | GTAC | 1 cut(s) | 253 |
| CviAII | CATG | 2 cut(s) | 217, 229 |
| CviJI | RGCY | 6 cut(s) | 48, 95, 124, 155, 179, 206 |
| CviKI_1 | RGCY | 6 cut(s) | 48, 95, 124, 155, 179, 206 |
| CviQI | GTAC | 1 cut(s) | 253 |
| Eam1104I | CTCTTC | 1 cut(s) | 258 |
| EarI | CTCTTC | 1 cut(s) | 258 |
| Eco32I | GATATC | 1 cut(s) | 56 |
| Eco47I | GGWCC | 1 cut(s) | 268 |
| EcoO109I | RGGNCCY | 1 cut(s) | 268 |
| EcoRI | GAATTC | 1 cut(s) | 102 |
| EcoRV | GATATC | 1 cut(s) | 56 |
| FaeI | CATG | 2 cut(s) | 220, 232 |
| FaiI | YATR | 3 cut(s) | 185, 218, 230 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 8, 40 |
| FatI | CATG | 2 cut(s) | 216, 228 |
| FblI | GTMKAC | 1 cut(s) | 78 |
| Fnu4HI | GCNGC | 2 cut(s) | 156, 159 |
| Fsp4HI | GCNGC | 2 cut(s) | 156, 159 |
| FspBI | CTAG | 2 cut(s) | 126, 147 |
| GluI | GCNGC | 2 cut(s) | 156, 159 |
| GsuI | CTGGAG | 1 cut(s) | 56 |
| Hin1II | CATG | 2 cut(s) | 220, 232 |
| HinfI | GANTC | 1 cut(s) | 236 |
| Hpy166II | GTNNAC | 1 cut(s) | 79 |
| Hpy188III | TCNNGA | 3 cut(s) | 51, 107, 217 |
| Hpy8I | GTNNAC | 1 cut(s) | 79 |
| HpyCH4IV | ACGT | 2 cut(s) | 135, 223 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 167, 176, 197 |
| HpySE526I | ACGT | 2 cut(s) | 135, 223 |
| Hsp92II | CATG | 2 cut(s) | 220, 232 |
| LmnI | GCTCC | 2 cut(s) | 34, 246 |
| LpnPI | CCDG | 6 cut(s) | 20, 23, 30, 36, 92, 95 |
| Lsp1109I | GCAGC | 2 cut(s) | 142, 145 |
| LweI | GCATC | 1 cut(s) | 94 |
| MaeI | CTAG | 2 cut(s) | 126, 147 |
| MaeII | ACGT | 2 cut(s) | 135, 223 |
| MaeIII | GTNAC | 2 cut(s) | 5, 224 |
| MboII | GAAGA | 1 cut(s) | 275 |
| MluCI | AATT | 1 cut(s) | 102 |
| MlyI | GAGTC | 1 cut(s) | 230 |
| MnlI | CCTC | 2 cut(s) | 181, 259 |
| MseI | TTAA | 1 cut(s) | 90 |
| MslI | CAYNNNNRTG | 1 cut(s) | 231 |
| MspCI | CTTAAG | 1 cut(s) | 89 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 167, 176, 197 |
| NlaIII | CATG | 2 cut(s) | 220, 232 |
| NlaIV | GGNNCC | 1 cut(s) | 270 |
| NmuCI | GTSAC | 1 cut(s) | 224 |
| PagI | TCATGA | 1 cut(s) | 216 |
| PkrI | GCNGC | 2 cut(s) | 157, 160 |
| PleI | GAGTC | 1 cut(s) | 230 |
| PpsI | GAGTC | 1 cut(s) | 230 |
| PpuMI | RGGWCCY | 1 cut(s) | 268 |
| Psp5II | RGGWCCY | 1 cut(s) | 268 |
| PspN4I | GGNNCC | 1 cut(s) | 270 |
| PspPI | GGNCC | 1 cut(s) | 268 |
| PspPPI | RGGWCCY | 1 cut(s) | 268 |
| PstNI | CAGNNNCTG | 1 cut(s) | 50 |
| RsaI | GTAC | 1 cut(s) | 254 |
| RsaNI | GTAC | 1 cut(s) | 253 |
| RseI | CAYNNNNRTG | 1 cut(s) | 231 |
| SaqAI | TTAA | 1 cut(s) | 90 |
| SatI | GCNGC | 2 cut(s) | 156, 159 |
| Sau96I | GGNCC | 1 cut(s) | 268 |
| SchI | GAGTC | 1 cut(s) | 230 |
| SetI | ASST | 6 cut(s) | 12, 138, 157, 181, 226, 258 |
| SfaNI | GCATC | 1 cut(s) | 94 |
| SinI | GGWCC | 1 cut(s) | 268 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 231 |
| SmlI | CTYRAG | 2 cut(s) | 89, 96 |
| SmoI | CTYRAG | 2 cut(s) | 89, 96 |
| Sse9I | AATT | 1 cut(s) | 102 |
| SspMI | CTAG | 2 cut(s) | 126, 147 |
| TaiI | ACGT | 2 cut(s) | 138, 226 |
| TaqI | TCGA | 1 cut(s) | 288 |
| TasI | AATT | 1 cut(s) | 102 |
| Tru1I | TTAA | 1 cut(s) | 90 |
| Tru9I | TTAA | 1 cut(s) | 90 |
| TscAI | CASTG | 1 cut(s) | 39 |
| TseFI | GTSAC | 1 cut(s) | 224 |
| TseI | GCWGC | 2 cut(s) | 155, 158 |
| Tsp45I | GTSAC | 1 cut(s) | 224 |
| TspDTI | ATGAA | 2 cut(s) | 245, 276 |
| TspRI | CASTG | 1 cut(s) | 39 |
| Vha464I | CTTAAG | 1 cut(s) | 89 |
| VpaK11BI | GGWCC | 1 cut(s) | 268 |
| XapI | RAATTY | 1 cut(s) | 102 |
| XmiI | GTMKAC | 1 cut(s) | 78 |
| XspI | CTAG | 2 cut(s) | 126, 147 |