zinc finger
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 621 |
| AatII | GACGTC | 1 cut(s) | 317 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 837 |
| AccBSI | CCGCTC | 2 cut(s) | 38, 44 |
| AccIII | TCCGGA | 1 cut(s) | 450 |
| AciI | CCGC | 5 cut(s) | 38, 44, 147, 308, 532 |
| AcoI | YGGCCR | 2 cut(s) | 395, 721 |
| AcvI | CACGTG | 1 cut(s) | 90 |
| AcyI | GRCGYC | 1 cut(s) | 314 |
| AdeI | CACNNNGTG | 1 cut(s) | 916 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 101, 338, 368, 747, 837 |
| AgsI | TTSAA | 1 cut(s) | 772 |
| AjiI | CACGTC | 2 cut(s) | 196, 589 |
| AjnI | CCWGG | 3 cut(s) | 367, 558, 582 |
| AluBI | AGCT | 2 cut(s) | 857, 908 |
| AluI | AGCT | 2 cut(s) | 857, 908 |
| Alw21I | GWGCWC | 1 cut(s) | 859 |
| Alw26I | GTCTC | 1 cut(s) | 281 |
| Ama87I | CYCGRG | 1 cut(s) | 572 |
| Aor13HI | TCCGGA | 1 cut(s) | 450 |
| AoxI | GGCC | 7 cut(s) | 46, 148, 305, 340, 358, 395, 721 |
| ApaI | GGGCCC | 1 cut(s) | 50 |
| ApeKI | GCWGC | 3 cut(s) | 82, 295, 335 |
| AspS9I | GGNCC | 7 cut(s) | 46, 47, 149, 243, 305, 359, 623 |
| AsuC2I | CCSGG | 1 cut(s) | 380 |
| AsuHPI | GGTGA | 1 cut(s) | 318 |
| AvaI | CYCGRG | 1 cut(s) | 572 |
| AvaII | GGWCC | 2 cut(s) | 243, 623 |
| BaeGI | GKGCMC | 3 cut(s) | 50, 95, 844 |
| BalI | TGGCCA | 1 cut(s) | 397 |
| BanII | GRGCYC | 2 cut(s) | 50, 859 |
| BauI | CACGAG | 1 cut(s) | 858 |
| BbrPI | CACGTG | 1 cut(s) | 90 |
| Bbv12I | GWGCWC | 1 cut(s) | 859 |
| BbvI | GCAGC | 3 cut(s) | 69, 307, 347 |
| BccI | CCATC | 2 cut(s) | 545, 762 |
| BceAI | ACGGC | 1 cut(s) | 708 |
| BciT130I | CCWGG | 3 cut(s) | 369, 560, 584 |
| BciVI | GTATCC | 1 cut(s) | 598 |
| BcnI | CCSGG | 1 cut(s) | 380 |
| BcoDI | GTCTC | 1 cut(s) | 281 |
| BfaI | CTAG | 2 cut(s) | 579, 944 |
| BfmI | CTRYAG | 1 cut(s) | 333 |
| BfuI | GTATCC | 1 cut(s) | 598 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 304 |
| BisI | GCNGC | 5 cut(s) | 83, 148, 296, 308, 336 |
| BlsI | GCNGC | 5 cut(s) | 84, 149, 297, 309, 337 |
| Bme1390I | CCNGG | 4 cut(s) | 369, 380, 560, 584 |
| Bme18I | GGWCC | 2 cut(s) | 243, 623 |
| BmeT110I | CYCGRG | 1 cut(s) | 572 |
| BmgBI | CACGTC | 2 cut(s) | 196, 589 |
| BmgT120I | GGNCC | 7 cut(s) | 46, 47, 149, 243, 305, 359, 623 |
| BmiI | GGNNCC | 6 cut(s) | 48, 151, 245, 677, 736, 752 |
| BmrFI | CCNGG | 4 cut(s) | 369, 380, 560, 584 |
| BmrI | ACTGGG | 1 cut(s) | 312 |
| BmsI | GCATC | 1 cut(s) | 547 |
| BmuI | ACTGGG | 1 cut(s) | 312 |
| BpmI | CTGGAG | 2 cut(s) | 351, 753 |
| BpuEI | CTTGAG | 1 cut(s) | 527 |
| BpuMI | CCSGG | 1 cut(s) | 380 |
| BsaAI | YACGTR | 1 cut(s) | 90 |
| BsaHI | GRCGYC | 1 cut(s) | 314 |
| BsaWI | WCCGGW | 1 cut(s) | 450 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 101, 338, 368, 747, 837 |
| Bse1I | ACTGG | 2 cut(s) | 307, 502 |
| BseAI | TCCGGA | 1 cut(s) | 450 |
| BseBI | CCWGG | 3 cut(s) | 369, 560, 584 |
| BseGI | GGATG | 1 cut(s) | 459 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 101, 338, 368, 747, 837 |
| BseMII | CTCAG | 2 cut(s) | 362, 786 |
| BseNI | ACTGG | 2 cut(s) | 307, 502 |
| BseSI | GKGCMC | 3 cut(s) | 50, 95, 844 |
| BseXI | GCAGC | 3 cut(s) | 69, 307, 347 |
| BseYI | CCCAGC | 1 cut(s) | 49 |
| BshFI | GGCC | 7 cut(s) | 48, 150, 307, 342, 360, 397, 723 |
| BsiHKAI | GWGCWC | 1 cut(s) | 859 |
| BsiHKCI | CYCGRG | 1 cut(s) | 572 |
| BsiSI | CCGG | 3 cut(s) | 380, 404, 451 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 101, 338, 368, 747, 837 |
| BsmAI | GTCTC | 1 cut(s) | 281 |
| BsnI | GGCC | 7 cut(s) | 48, 150, 307, 342, 360, 397, 723 |
| BsoBI | CYCGRG | 1 cut(s) | 572 |
| Bsp120I | GGGCCC | 1 cut(s) | 46 |
| Bsp1286I | GDGCHC | 4 cut(s) | 50, 95, 844, 859 |
| Bsp13I | TCCGGA | 1 cut(s) | 450 |
| Bsp143I | GATC | 3 cut(s) | 439, 928, 940 |
| BspACI | CCGC | 5 cut(s) | 38, 44, 147, 308, 532 |
| BspANI | GGCC | 7 cut(s) | 48, 150, 307, 342, 360, 397, 723 |
| BspCNI | CTCAG | 2 cut(s) | 361, 787 |
| BspEI | TCCGGA | 1 cut(s) | 450 |
| BspHI | TCATGA | 1 cut(s) | 931 |
| BspLI | GGNNCC | 6 cut(s) | 48, 151, 245, 677, 736, 752 |
| BspMAI | CTGCAG | 1 cut(s) | 337 |
| BsrBI | CCGCTC | 2 cut(s) | 38, 44 |
| BsrI | ACTGG | 2 cut(s) | 307, 502 |
| BssMI | GATC | 3 cut(s) | 439, 928, 940 |
| BssNI | GRCGYC | 1 cut(s) | 314 |
| BssSI | CACGAG | 1 cut(s) | 858 |
| Bst2BI | CACGAG | 1 cut(s) | 858 |
| Bst2UI | CCWGG | 3 cut(s) | 369, 560, 584 |
| Bst4CI | ACNGT | 1 cut(s) | 893 |
| Bst6I | CTCTTC | 3 cut(s) | 51, 676, 796 |
| BstACI | GRCGYC | 1 cut(s) | 314 |
| BstBAI | YACGTR | 1 cut(s) | 90 |
| BstC8I | GCNNGC | 5 cut(s) | 46, 322, 340, 358, 536 |
| BstDEI | CTNAG | 3 cut(s) | 291, 348, 795 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 336 |
| BstF5I | GGATG | 1 cut(s) | 459 |
| BstKTI | GATC | 3 cut(s) | 442, 931, 943 |
| BstMAI | GTCTC | 1 cut(s) | 281 |
| BstMBI | GATC | 3 cut(s) | 439, 928, 940 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 50, 304, 884, 905 |
| BstNI | CCWGG | 3 cut(s) | 369, 560, 584 |
| BstSCI | CCNGG | 4 cut(s) | 367, 378, 558, 582 |
| BstSFI | CTRYAG | 1 cut(s) | 333 |
| BstSLI | GKGCMC | 3 cut(s) | 50, 95, 844 |
| BstV1I | GCAGC | 3 cut(s) | 69, 307, 347 |
| BsuI | GTATCC | 1 cut(s) | 598 |
| BsuRI | GGCC | 7 cut(s) | 48, 150, 307, 342, 360, 397, 723 |
| BtrI | CACGTC | 2 cut(s) | 196, 589 |
| BtsCI | GGATG | 1 cut(s) | 459 |
| BtsI | GCAGTG | 1 cut(s) | 873 |
| BtsIMutI | CAGTG | 2 cut(s) | 300, 873 |
| Cac8I | GCNNGC | 5 cut(s) | 46, 322, 340, 358, 536 |
| CciI | TCATGA | 1 cut(s) | 931 |
| Cfr13I | GGNCC | 7 cut(s) | 46, 47, 149, 243, 305, 359, 623 |
| CseI | GACGC | 1 cut(s) | 773 |
| CviAII | CATG | 3 cut(s) | 79, 415, 932 |
| DdeI | CTNAG | 3 cut(s) | 291, 348, 795 |
| DpnI | GATC | 3 cut(s) | 441, 930, 942 |
| DpnII | GATC | 3 cut(s) | 439, 928, 940 |
| DraIII | CACNNNGTG | 1 cut(s) | 916 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 621 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 621 |
| EaeI | YGGCCR | 2 cut(s) | 395, 721 |
| Eam1104I | CTCTTC | 3 cut(s) | 51, 676, 796 |
| EarI | CTCTTC | 3 cut(s) | 51, 676, 796 |
| EciI | GGCGGA | 1 cut(s) | 521 |
| Ecl136II | GAGCTC | 1 cut(s) | 857 |
| Eco24I | GRGCYC | 2 cut(s) | 50, 859 |
| Eco32I | GATATC | 2 cut(s) | 509, 529 |
| Eco47I | GGWCC | 2 cut(s) | 243, 623 |
| Eco53kI | GAGCTC | 1 cut(s) | 857 |
| Eco72I | CACGTG | 1 cut(s) | 90 |
| Eco88I | CYCGRG | 1 cut(s) | 572 |
| EcoICRI | GAGCTC | 1 cut(s) | 857 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 336 |
| EcoRII | CCWGG | 3 cut(s) | 367, 558, 582 |
| EcoRV | GATATC | 2 cut(s) | 509, 529 |
| EcoT38I | GRGCYC | 2 cut(s) | 50, 859 |
| FaeI | CATG | 3 cut(s) | 82, 418, 935 |
| FatI | CATG | 3 cut(s) | 78, 414, 931 |
| FauI | CCCGC | 2 cut(s) | 31, 37 |
| Fnu4HI | GCNGC | 5 cut(s) | 83, 148, 296, 308, 336 |
| FokI | GGATG | 1 cut(s) | 466 |
| FriOI | GRGCYC | 2 cut(s) | 50, 859 |
| Fsp4HI | GCNGC | 5 cut(s) | 83, 148, 296, 308, 336 |
| FspBI | CTAG | 2 cut(s) | 579, 944 |
| GluI | GCNGC | 5 cut(s) | 83, 148, 296, 308, 336 |
| GsaI | CCCAGC | 1 cut(s) | 53 |
| GsuI | CTGGAG | 2 cut(s) | 351, 753 |
| HaeIII | GGCC | 7 cut(s) | 48, 150, 307, 342, 360, 397, 723 |
| HapII | CCGG | 3 cut(s) | 380, 404, 451 |
| HgaI | GACGC | 1 cut(s) | 773 |
| Hin1I | GRCGYC | 1 cut(s) | 314 |
| Hin1II | CATG | 3 cut(s) | 82, 418, 935 |
| HincII | GTYRAC | 2 cut(s) | 374, 385 |
| HindII | GTYRAC | 2 cut(s) | 374, 385 |
| HinfI | GANTC | 3 cut(s) | 555, 568, 791 |
| HpaII | CCGG | 3 cut(s) | 380, 404, 451 |
| HphI | GGTGA | 1 cut(s) | 318 |
| Hpy166II | GTNNAC | 4 cut(s) | 243, 374, 385, 689 |
| Hpy188I | TCNGA | 2 cut(s) | 439, 796 |
| Hpy8I | GTNNAC | 4 cut(s) | 243, 374, 385, 689 |
| HpyAV | CCTTC | 2 cut(s) | 95, 112 |
| HpyCH4III | ACNGT | 1 cut(s) | 893 |
| HpyCH4IV | ACGT | 5 cut(s) | 89, 195, 314, 588, 691 |
| HpyCH4V | TGCA | 1 cut(s) | 335 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 50, 304, 884, 905 |
| HpyF3I | CTNAG | 3 cut(s) | 291, 348, 795 |
| HpySE526I | ACGT | 5 cut(s) | 89, 195, 314, 588, 691 |
| Hsp92I | GRCGYC | 1 cut(s) | 314 |
| Hsp92II | CATG | 3 cut(s) | 82, 418, 935 |
| Kpn2I | TCCGGA | 1 cut(s) | 450 |
| Kzo9I | GATC | 3 cut(s) | 439, 928, 940 |
| LmnI | GCTCC | 5 cut(s) | 35, 41, 487, 734, 750 |
| Lsp1109I | GCAGC | 3 cut(s) | 69, 307, 347 |
| LweI | GCATC | 1 cut(s) | 547 |
| MaeI | CTAG | 2 cut(s) | 579, 944 |
| MaeII | ACGT | 5 cut(s) | 89, 195, 314, 588, 691 |
| MaeIII | GTNAC | 2 cut(s) | 458, 650 |
| MalI | GATC | 3 cut(s) | 441, 930, 942 |
| MbiI | CCGCTC | 2 cut(s) | 38, 44 |
| MboI | GATC | 3 cut(s) | 439, 928, 940 |
| MhlI | GDGCHC | 4 cut(s) | 50, 95, 844, 859 |
| MlsI | TGGCCA | 1 cut(s) | 397 |
| MluCI | AATT | 1 cut(s) | 470 |
| MluNI | TGGCCA | 1 cut(s) | 397 |
| MlyI | GAGTC | 1 cut(s) | 800 |
| Mox20I | TGGCCA | 1 cut(s) | 397 |
| MroI | TCCGGA | 1 cut(s) | 450 |
| MscI | TGGCCA | 1 cut(s) | 397 |
| MslI | CAYNNNNRTG | 2 cut(s) | 759, 936 |
| Msp20I | TGGCCA | 1 cut(s) | 397 |
| MspA1I | CMGCKG | 1 cut(s) | 310 |
| MspI | CCGG | 3 cut(s) | 380, 404, 451 |
| MspR9I | CCNGG | 4 cut(s) | 369, 380, 560, 584 |
| MvaI | CCWGG | 3 cut(s) | 369, 560, 584 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 50, 304, 884, 905 |
| NciI | CCSGG | 1 cut(s) | 380 |
| NdeII | GATC | 3 cut(s) | 439, 928, 940 |
| NlaIII | CATG | 3 cut(s) | 82, 418, 935 |
| NlaIV | GGNNCC | 6 cut(s) | 48, 151, 245, 677, 736, 752 |
| PaeR7I | CTCGAG | 1 cut(s) | 572 |
| PagI | TCATGA | 1 cut(s) | 931 |
| PfeI | GAWTC | 2 cut(s) | 555, 568 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 837 |
| PfoI | TCCNGGA | 1 cut(s) | 558 |
| PkrI | GCNGC | 5 cut(s) | 84, 149, 297, 309, 337 |
| PleI | GAGTC | 1 cut(s) | 799 |
| PmaCI | CACGTG | 1 cut(s) | 90 |
| PmlI | CACGTG | 1 cut(s) | 90 |
| PpsI | GAGTC | 1 cut(s) | 799 |
| Ppu21I | YACGTR | 1 cut(s) | 90 |
| Psp124BI | GAGCTC | 1 cut(s) | 859 |
| Psp6I | CCWGG | 3 cut(s) | 367, 558, 582 |
| PspCI | CACGTG | 1 cut(s) | 90 |
| PspFI | CCCAGC | 1 cut(s) | 49 |
| PspGI | CCWGG | 3 cut(s) | 367, 558, 582 |
| PspN4I | GGNNCC | 6 cut(s) | 48, 151, 245, 677, 736, 752 |
| PspOMI | GGGCCC | 1 cut(s) | 46 |
| PspPI | GGNCC | 7 cut(s) | 46, 47, 149, 243, 305, 359, 623 |
| PstI | CTGCAG | 1 cut(s) | 337 |
| RseI | CAYNNNNRTG | 2 cut(s) | 759, 936 |
| SacI | GAGCTC | 1 cut(s) | 859 |
| SatI | GCNGC | 5 cut(s) | 83, 148, 296, 308, 336 |
| Sau3AI | GATC | 3 cut(s) | 439, 928, 940 |
| Sau96I | GGNCC | 7 cut(s) | 46, 47, 149, 243, 305, 359, 623 |
| SchI | GAGTC | 1 cut(s) | 800 |
| ScrFI | CCNGG | 4 cut(s) | 369, 380, 560, 584 |
| SduI | GDGCHC | 4 cut(s) | 50, 95, 844, 859 |
| SfaNI | GCATC | 1 cut(s) | 547 |
| SfcI | CTRYAG | 1 cut(s) | 333 |
| Sfr274I | CTCGAG | 1 cut(s) | 572 |
| SinI | GGWCC | 2 cut(s) | 243, 623 |
| SlaI | CTCGAG | 1 cut(s) | 572 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 759, 936 |
| SmlI | CTYRAG | 2 cut(s) | 542, 572 |
| SmoI | CTYRAG | 2 cut(s) | 542, 572 |
| Sse9I | AATT | 1 cut(s) | 470 |
| SsiI | CCGC | 5 cut(s) | 38, 44, 147, 308, 532 |
| SspMI | CTAG | 2 cut(s) | 579, 944 |
| SstI | GAGCTC | 1 cut(s) | 859 |
| StyD4I | CCNGG | 4 cut(s) | 367, 378, 558, 582 |
| TaaI | ACNGT | 1 cut(s) | 893 |
| TaiI | ACGT | 5 cut(s) | 92, 198, 317, 591, 694 |
| TaqI | TCGA | 2 cut(s) | 573, 817 |
| TasI | AATT | 1 cut(s) | 470 |
| TauI | GCSGC | 2 cut(s) | 150, 310 |
| TfiI | GAWTC | 2 cut(s) | 555, 568 |
| TscAI | CASTG | 2 cut(s) | 307, 880 |
| TseI | GCWGC | 3 cut(s) | 82, 295, 335 |
| TspDTI | ATGAA | 2 cut(s) | 403, 948 |
| TspGWI | ACGGA | 1 cut(s) | 688 |
| TspRI | CASTG | 2 cut(s) | 307, 880 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 837 |
| VpaK11BI | GGWCC | 2 cut(s) | 243, 623 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 336 |
| XbaI | TCTAGA | 1 cut(s) | 943 |
| XhoI | CTCGAG | 1 cut(s) | 572 |
| XspI | CTAG | 2 cut(s) | 579, 944 |
| ZraI | GACGTC | 1 cut(s) | 315 |