No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 581, 737 |
| AciI | CCGC | 2 cut(s) | 79, 286 |
| AcoI | YGGCCR | 1 cut(s) | 568 |
| AfaI | GTAC | 1 cut(s) | 248 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 682, 686 |
| AgsI | TTSAA | 4 cut(s) | 109, 301, 619, 773 |
| AjiI | CACGTC | 1 cut(s) | 136 |
| AjnI | CCWGG | 2 cut(s) | 129, 742 |
| AluBI | AGCT | 2 cut(s) | 155, 487 |
| AluI | AGCT | 2 cut(s) | 155, 487 |
| Alw21I | GWGCWC | 1 cut(s) | 489 |
| Alw26I | GTCTC | 1 cut(s) | 700 |
| Ama87I | CYCGRG | 1 cut(s) | 119 |
| AoxI | GGCC | 3 cut(s) | 93, 568, 795 |
| ApeKI | GCWGC | 2 cut(s) | 179, 752 |
| AspA2I | CCTAGG | 1 cut(s) | 680 |
| AspLEI | GCGC | 2 cut(s) | 625, 692 |
| AspS9I | GGNCC | 1 cut(s) | 38 |
| AsuHPI | GGTGA | 2 cut(s) | 751, 758 |
| AvaI | CYCGRG | 1 cut(s) | 119 |
| AvaII | GGWCC | 1 cut(s) | 38 |
| AvrII | CCTAGG | 1 cut(s) | 680 |
| BalI | TGGCCA | 1 cut(s) | 570 |
| BanI | GGYRCC | 2 cut(s) | 581, 737 |
| BanII | GRGCYC | 1 cut(s) | 489 |
| BbsI | GAAGAC | 2 cut(s) | 273, 401 |
| Bbv12I | GWGCWC | 1 cut(s) | 489 |
| BbvI | GCAGC | 2 cut(s) | 191, 739 |
| BccI | CCATC | 7 cut(s) | 92, 215, 421, 609, 647, 710, 728 |
| BciT130I | CCWGG | 2 cut(s) | 131, 744 |
| BclI | TGATCA | 1 cut(s) | 468 |
| BcoDI | GTCTC | 1 cut(s) | 700 |
| BfaI | CTAG | 1 cut(s) | 681 |
| BfmI | CTRYAG | 1 cut(s) | 459 |
| BfoI | RGCGCY | 1 cut(s) | 626 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 188 |
| BisI | GCNGC | 2 cut(s) | 180, 753 |
| BlnI | CCTAGG | 1 cut(s) | 680 |
| BlsI | GCNGC | 2 cut(s) | 181, 754 |
| Bme1390I | CCNGG | 2 cut(s) | 131, 744 |
| Bme18I | GGWCC | 1 cut(s) | 38 |
| BmeT110I | CYCGRG | 1 cut(s) | 119 |
| BmgBI | CACGTC | 1 cut(s) | 136 |
| BmgT120I | GGNCC | 1 cut(s) | 38 |
| BmiI | GGNNCC | 4 cut(s) | 39, 281, 583, 739 |
| BmrFI | CCNGG | 2 cut(s) | 131, 744 |
| BmsI | GCATC | 2 cut(s) | 739, 778 |
| BpiI | GAAGAC | 2 cut(s) | 273, 401 |
| BpmI | CTGGAG | 1 cut(s) | 227 |
| Bpu10I | CCTNAGC | 1 cut(s) | 792 |
| BpuEI | CTTGAG | 2 cut(s) | 74, 141 |
| BsaJI | CCNNGG | 3 cut(s) | 680, 711, 742 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 682, 686 |
| Bse1I | ACTGG | 2 cut(s) | 49, 244 |
| BseBI | CCWGG | 2 cut(s) | 131, 744 |
| BseDI | CCNNGG | 3 cut(s) | 680, 711, 742 |
| BseGI | GGATG | 2 cut(s) | 238, 721 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 682, 686 |
| BseNI | ACTGG | 2 cut(s) | 49, 244 |
| BseRI | GAGGAG | 1 cut(s) | 272 |
| BseXI | GCAGC | 2 cut(s) | 191, 739 |
| BshFI | GGCC | 3 cut(s) | 95, 570, 797 |
| BshNI | GGYRCC | 2 cut(s) | 581, 737 |
| BsiHKAI | GWGCWC | 1 cut(s) | 489 |
| BsiHKCI | CYCGRG | 1 cut(s) | 119 |
| BslFI | GGGAC | 1 cut(s) | 51 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 682, 686 |
| BsmAI | GTCTC | 1 cut(s) | 700 |
| BsmFI | GGGAC | 1 cut(s) | 51 |
| BsnI | GGCC | 3 cut(s) | 95, 570, 797 |
| BsoBI | CYCGRG | 1 cut(s) | 119 |
| Bsp1286I | GDGCHC | 1 cut(s) | 489 |
| Bsp143I | GATC | 1 cut(s) | 468 |
| Bsp19I | CCATGG | 1 cut(s) | 711 |
| BspACI | CCGC | 2 cut(s) | 79, 286 |
| BspANI | GGCC | 3 cut(s) | 95, 570, 797 |
| BspHI | TCATGA | 3 cut(s) | 70, 481, 727 |
| BspLI | GGNNCC | 4 cut(s) | 39, 281, 583, 739 |
| BspMAI | CTGCAG | 1 cut(s) | 463 |
| BspT107I | GGYRCC | 2 cut(s) | 581, 737 |
| BsrI | ACTGG | 2 cut(s) | 49, 244 |
| BssECI | CCNNGG | 3 cut(s) | 680, 711, 742 |
| BssMI | GATC | 1 cut(s) | 468 |
| BssT1I | CCWWGG | 2 cut(s) | 680, 711 |
| Bst2UI | CCWGG | 2 cut(s) | 131, 744 |
| Bst4CI | ACNGT | 2 cut(s) | 145, 614 |
| Bst6I | CTCTTC | 1 cut(s) | 523 |
| BstC8I | GCNNGC | 3 cut(s) | 153, 223, 688 |
| BstDEI | CTNAG | 4 cut(s) | 184, 435, 594, 792 |
| BstDSI | CCRYGG | 1 cut(s) | 711 |
| BstF5I | GGATG | 2 cut(s) | 238, 721 |
| BstH2I | RGCGCY | 1 cut(s) | 626 |
| BstHHI | GCGC | 2 cut(s) | 625, 692 |
| BstKTI | GATC | 1 cut(s) | 471 |
| BstMAI | GTCTC | 1 cut(s) | 700 |
| BstMBI | GATC | 1 cut(s) | 468 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 188, 197 |
| BstNI | CCWGG | 2 cut(s) | 131, 744 |
| BstSCI | CCNGG | 2 cut(s) | 129, 742 |
| BstSFI | CTRYAG | 1 cut(s) | 459 |
| BstV1I | GCAGC | 2 cut(s) | 191, 739 |
| BstV2I | GAAGAC | 2 cut(s) | 273, 401 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 578 |
| BsuRI | GGCC | 3 cut(s) | 95, 570, 797 |
| BtgI | CCRYGG | 1 cut(s) | 711 |
| BtgZI | GCGATG | 1 cut(s) | 395 |
| BtrI | CACGTC | 1 cut(s) | 136 |
| BtsCI | GGATG | 2 cut(s) | 238, 721 |
| BtsI | GCAGTG | 1 cut(s) | 657 |
| BtsIMutI | CAGTG | 1 cut(s) | 657 |
| Cac8I | GCNNGC | 3 cut(s) | 153, 223, 688 |
| CciI | TCATGA | 3 cut(s) | 70, 481, 727 |
| CfoI | GCGC | 2 cut(s) | 625, 692 |
| Cfr13I | GGNCC | 1 cut(s) | 38 |
| Csp6I | GTAC | 1 cut(s) | 247 |
| CviAII | CATG | 5 cut(s) | 71, 482, 572, 712, 728 |
| CviQI | GTAC | 1 cut(s) | 247 |
| DdeI | CTNAG | 4 cut(s) | 184, 435, 594, 792 |
| DpnI | GATC | 1 cut(s) | 470 |
| DpnII | GATC | 1 cut(s) | 468 |
| EaeI | YGGCCR | 1 cut(s) | 568 |
| Eam1104I | CTCTTC | 1 cut(s) | 523 |
| EarI | CTCTTC | 1 cut(s) | 523 |
| EciI | GGCGGA | 1 cut(s) | 68 |
| Ecl136II | GAGCTC | 1 cut(s) | 487 |
| Eco130I | CCWWGG | 2 cut(s) | 680, 711 |
| Eco147I | AGGCCT | 1 cut(s) | 797 |
| Eco24I | GRGCYC | 1 cut(s) | 489 |
| Eco32I | GATATC | 2 cut(s) | 76, 370 |
| Eco47I | GGWCC | 1 cut(s) | 38 |
| Eco53kI | GAGCTC | 1 cut(s) | 487 |
| Eco88I | CYCGRG | 1 cut(s) | 119 |
| EcoICRI | GAGCTC | 1 cut(s) | 487 |
| EcoRII | CCWGG | 2 cut(s) | 129, 742 |
| EcoRV | GATATC | 2 cut(s) | 76, 370 |
| EcoT14I | CCWWGG | 2 cut(s) | 680, 711 |
| EcoT38I | GRGCYC | 1 cut(s) | 489 |
| ErhI | CCWWGG | 2 cut(s) | 680, 711 |
| FaeI | CATG | 5 cut(s) | 74, 485, 575, 715, 731 |
| FaqI | GGGAC | 1 cut(s) | 51 |
| FatI | CATG | 5 cut(s) | 70, 481, 571, 711, 727 |
| FauNDI | CATATG | 1 cut(s) | 228 |
| FbaI | TGATCA | 1 cut(s) | 468 |
| Fnu4HI | GCNGC | 2 cut(s) | 180, 753 |
| FokI | GGATG | 2 cut(s) | 245, 728 |
| FriOI | GRGCYC | 1 cut(s) | 489 |
| Fsp4HI | GCNGC | 2 cut(s) | 180, 753 |
| FspBI | CTAG | 1 cut(s) | 681 |
| GlaI | GCGC | 2 cut(s) | 624, 691 |
| GluI | GCNGC | 2 cut(s) | 180, 753 |
| GsuI | CTGGAG | 1 cut(s) | 227 |
| HaeII | RGCGCY | 1 cut(s) | 626 |
| HaeIII | GGCC | 3 cut(s) | 95, 570, 797 |
| HhaI | GCGC | 2 cut(s) | 625, 692 |
| Hin1II | CATG | 5 cut(s) | 74, 485, 575, 715, 731 |
| Hin6I | GCGC | 2 cut(s) | 623, 690 |
| HinP1I | GCGC | 2 cut(s) | 623, 690 |
| HincII | GTYRAC | 1 cut(s) | 536 |
| HindII | GTYRAC | 1 cut(s) | 536 |
| HinfI | GANTC | 4 cut(s) | 102, 115, 236, 397 |
| HphI | GGTGA | 2 cut(s) | 751, 758 |
| Hpy166II | GTNNAC | 1 cut(s) | 536 |
| Hpy188I | TCNGA | 3 cut(s) | 52, 325, 787 |
| Hpy188III | TCNNGA | 7 cut(s) | 71, 106, 119, 158, 311, 482, 728 |
| Hpy8I | GTNNAC | 1 cut(s) | 536 |
| HpyAV | CCTTC | 3 cut(s) | 270, 418, 676 |
| HpyCH4III | ACNGT | 2 cut(s) | 145, 614 |
| HpyCH4IV | ACGT | 2 cut(s) | 135, 538 |
| HpyCH4V | TGCA | 3 cut(s) | 422, 461, 755 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 188, 197 |
| HpyF3I | CTNAG | 4 cut(s) | 184, 435, 594, 792 |
| HpySE526I | ACGT | 2 cut(s) | 135, 538 |
| Hsp92II | CATG | 5 cut(s) | 74, 485, 575, 715, 731 |
| HspAI | GCGC | 2 cut(s) | 623, 690 |
| Ksp22I | TGATCA | 1 cut(s) | 468 |
| Kzo9I | GATC | 1 cut(s) | 468 |
| LmnI | GCTCC | 4 cut(s) | 34, 148, 246, 285 |
| Lsp1109I | GCAGC | 2 cut(s) | 191, 739 |
| LweI | GCATC | 2 cut(s) | 739, 778 |
| MaeI | CTAG | 1 cut(s) | 681 |
| MaeII | ACGT | 2 cut(s) | 135, 538 |
| MaeIII | GTNAC | 2 cut(s) | 5, 454 |
| MalI | GATC | 1 cut(s) | 470 |
| MboI | GATC | 1 cut(s) | 468 |
| MboII | GAAGA | 4 cut(s) | 275, 278, 406, 540 |
| MhlI | GDGCHC | 1 cut(s) | 489 |
| MlsI | TGGCCA | 1 cut(s) | 570 |
| MluCI | AATT | 3 cut(s) | 17, 353, 447 |
| MluNI | TGGCCA | 1 cut(s) | 570 |
| MlyI | GAGTC | 1 cut(s) | 391 |
| MnlI | CCTC | 8 cut(s) | 181, 293, 488, 524, 544, 548, 636, 673 |
| Mox20I | TGGCCA | 1 cut(s) | 570 |
| MscI | TGGCCA | 1 cut(s) | 570 |
| MseI | TTAA | 3 cut(s) | 215, 339, 347 |
| MslI | CAYNNNNRTG | 6 cut(s) | 215, 231, 576, 606, 729, 732 |
| Msp20I | TGGCCA | 1 cut(s) | 570 |
| MspR9I | CCNGG | 2 cut(s) | 131, 744 |
| MvaI | CCWGG | 2 cut(s) | 131, 744 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 188, 197 |
| NcoI | CCATGG | 1 cut(s) | 711 |
| NdeI | CATATG | 1 cut(s) | 228 |
| NdeII | GATC | 1 cut(s) | 468 |
| NlaIII | CATG | 5 cut(s) | 74, 485, 575, 715, 731 |
| NlaIV | GGNNCC | 4 cut(s) | 39, 281, 583, 739 |
| PaeR7I | CTCGAG | 1 cut(s) | 119 |
| PagI | TCATGA | 3 cut(s) | 70, 481, 727 |
| PceI | AGGCCT | 1 cut(s) | 797 |
| PfeI | GAWTC | 3 cut(s) | 102, 115, 236 |
| PfoI | TCCNGGA | 1 cut(s) | 129 |
| PkrI | GCNGC | 2 cut(s) | 181, 754 |
| PleI | GAGTC | 1 cut(s) | 391 |
| PpsI | GAGTC | 1 cut(s) | 391 |
| Psp124BI | GAGCTC | 1 cut(s) | 489 |
| Psp6I | CCWGG | 2 cut(s) | 129, 742 |
| PspGI | CCWGG | 2 cut(s) | 129, 742 |
| PspN4I | GGNNCC | 4 cut(s) | 39, 281, 583, 739 |
| PspPI | GGNCC | 1 cut(s) | 38 |
| PstI | CTGCAG | 1 cut(s) | 463 |
| RsaI | GTAC | 1 cut(s) | 248 |
| RsaNI | GTAC | 1 cut(s) | 247 |
| RseI | CAYNNNNRTG | 6 cut(s) | 215, 231, 576, 606, 729, 732 |
| SacI | GAGCTC | 1 cut(s) | 489 |
| SaqAI | TTAA | 3 cut(s) | 215, 339, 347 |
| SatI | GCNGC | 2 cut(s) | 180, 753 |
| Sau3AI | GATC | 1 cut(s) | 468 |
| Sau96I | GGNCC | 1 cut(s) | 38 |
| SchI | GAGTC | 1 cut(s) | 391 |
| ScrFI | CCNGG | 2 cut(s) | 131, 744 |
| SduI | GDGCHC | 1 cut(s) | 489 |
| SfaNI | GCATC | 2 cut(s) | 739, 778 |
| SfcI | CTRYAG | 1 cut(s) | 459 |
| Sfr274I | CTCGAG | 1 cut(s) | 119 |
| SinI | GGWCC | 1 cut(s) | 38 |
| SlaI | CTCGAG | 1 cut(s) | 119 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 215, 231, 576, 606, 729, 732 |
| SmlI | CTYRAG | 3 cut(s) | 89, 119, 156 |
| SmoI | CTYRAG | 3 cut(s) | 89, 119, 156 |
| Sse9I | AATT | 3 cut(s) | 17, 353, 447 |
| SseBI | AGGCCT | 1 cut(s) | 797 |
| SsiI | CCGC | 2 cut(s) | 79, 286 |
| SspMI | CTAG | 1 cut(s) | 681 |
| SstI | GAGCTC | 1 cut(s) | 489 |
| StuI | AGGCCT | 1 cut(s) | 797 |
| StyD4I | CCNGG | 2 cut(s) | 129, 742 |
| StyI | CCWWGG | 2 cut(s) | 680, 711 |
| TaaI | ACNGT | 2 cut(s) | 145, 614 |
| TaiI | ACGT | 2 cut(s) | 138, 541 |
| TaqI | TCGA | 2 cut(s) | 120, 445 |
| TasI | AATT | 3 cut(s) | 17, 353, 447 |
| TfiI | GAWTC | 3 cut(s) | 102, 115, 236 |
| Tru1I | TTAA | 3 cut(s) | 215, 339, 347 |
| Tru9I | TTAA | 3 cut(s) | 215, 339, 347 |
| TscAI | CASTG | 1 cut(s) | 664 |
| TseI | GCWGC | 2 cut(s) | 179, 752 |
| TspDTI | ATGAA | 6 cut(s) | 59, 272, 276, 325, 470, 713 |
| TspRI | CASTG | 1 cut(s) | 664 |
| VpaK11BI | GGWCC | 1 cut(s) | 38 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 214, 683 |
| XhoI | CTCGAG | 1 cut(s) | 119 |
| XmaJI | CCTAGG | 1 cut(s) | 680 |
| XspI | CTAG | 1 cut(s) | 681 |