No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 654, 905 |
| AccB1I | GGYRCC | 2 cut(s) | 609, 770 |
| AccII | CGCG | 1 cut(s) | 594 |
| AciI | CCGC | 4 cut(s) | 79, 286, 691, 912 |
| AcoI | YGGCCR | 1 cut(s) | 757 |
| AcsI | RAATTY | 2 cut(s) | 353, 447 |
| AcyI | GRCGYC | 2 cut(s) | 610, 771 |
| AdeI | CACNNNGTG | 1 cut(s) | 952 |
| AfaI | GTAC | 1 cut(s) | 248 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 605 |
| AgsI | TTSAA | 2 cut(s) | 301, 808 |
| AhlI | ACTAGT | 1 cut(s) | 904 |
| AjiI | CACGTC | 1 cut(s) | 136 |
| AjnI | CCWGG | 2 cut(s) | 105, 129 |
| AluBI | AGCT | 7 cut(s) | 155, 161, 182, 487, 497, 893, 944 |
| AluI | AGCT | 7 cut(s) | 155, 161, 182, 487, 497, 893, 944 |
| Alw21I | GWGCWC | 1 cut(s) | 895 |
| Alw26I | GTCTC | 1 cut(s) | 421 |
| Ama87I | CYCGRG | 1 cut(s) | 119 |
| AoxI | GGCC | 2 cut(s) | 93, 757 |
| ApeKI | GCWGC | 1 cut(s) | 179 |
| ApoI | RAATTY | 2 cut(s) | 353, 447 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 330 |
| AspLEI | GCGC | 3 cut(s) | 596, 612, 773 |
| AspS9I | GGNCC | 1 cut(s) | 656 |
| AsuHPI | GGTGA | 2 cut(s) | 901, 986 |
| AvaI | CYCGRG | 1 cut(s) | 119 |
| AvaII | GGWCC | 1 cut(s) | 656 |
| BaeGI | GKGCMC | 1 cut(s) | 880 |
| BalI | TGGCCA | 1 cut(s) | 759 |
| BanI | GGYRCC | 2 cut(s) | 609, 770 |
| BanII | GRGCYC | 1 cut(s) | 895 |
| BauI | CACGAG | 1 cut(s) | 894 |
| BbsI | GAAGAC | 2 cut(s) | 273, 401 |
| Bbv12I | GWGCWC | 1 cut(s) | 895 |
| BbvI | GCAGC | 1 cut(s) | 191 |
| BccI | CCATC | 4 cut(s) | 215, 421, 785, 798 |
| BciT130I | CCWGG | 2 cut(s) | 107, 131 |
| BciVI | GTATCC | 1 cut(s) | 631 |
| BcoDI | GTCTC | 1 cut(s) | 421 |
| BcuI | ACTAGT | 1 cut(s) | 904 |
| BfaI | CTAG | 3 cut(s) | 126, 905, 980 |
| BfmI | CTRYAG | 1 cut(s) | 459 |
| BfoI | RGCGCY | 2 cut(s) | 613, 774 |
| BfuI | GTATCC | 1 cut(s) | 631 |
| BisI | GCNGC | 1 cut(s) | 180 |
| BlsI | GCNGC | 1 cut(s) | 181 |
| Bme1390I | CCNGG | 2 cut(s) | 107, 131 |
| Bme18I | GGWCC | 1 cut(s) | 656 |
| BmeT110I | CYCGRG | 1 cut(s) | 119 |
| BmgBI | CACGTC | 1 cut(s) | 136 |
| BmgT120I | GGNCC | 1 cut(s) | 656 |
| BmiI | GGNNCC | 4 cut(s) | 281, 611, 713, 772 |
| BmrFI | CCNGG | 2 cut(s) | 107, 131 |
| BmsI | GCATC | 2 cut(s) | 94, 367 |
| BoxI | GACNNNNGTC | 1 cut(s) | 27 |
| BpiI | GAAGAC | 2 cut(s) | 273, 401 |
| BpmI | CTGGAG | 1 cut(s) | 227 |
| BpuEI | CTTGAG | 2 cut(s) | 74, 141 |
| BsaHI | GRCGYC | 2 cut(s) | 610, 771 |
| BsaJI | CCNNGG | 1 cut(s) | 555 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 605 |
| Bse1I | ACTGG | 2 cut(s) | 49, 244 |
| BseBI | CCWGG | 2 cut(s) | 107, 131 |
| BseDI | CCNNGG | 1 cut(s) | 555 |
| BseGI | GGATG | 2 cut(s) | 210, 238 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 605 |
| BseNI | ACTGG | 2 cut(s) | 49, 244 |
| BseRI | GAGGAG | 1 cut(s) | 272 |
| BseSI | GKGCMC | 1 cut(s) | 880 |
| BseXI | GCAGC | 1 cut(s) | 191 |
| Bsh1236I | CGCG | 1 cut(s) | 594 |
| BshFI | GGCC | 2 cut(s) | 95, 759 |
| BshNI | GGYRCC | 2 cut(s) | 609, 770 |
| BsiHKAI | GWGCWC | 1 cut(s) | 895 |
| BsiHKCI | CYCGRG | 1 cut(s) | 119 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 605 |
| BsmAI | GTCTC | 1 cut(s) | 421 |
| BsmBI | CGTCTC | 1 cut(s) | 421 |
| BsnI | GGCC | 2 cut(s) | 95, 759 |
| BsoBI | CYCGRG | 1 cut(s) | 119 |
| Bsp1286I | GDGCHC | 2 cut(s) | 880, 895 |
| Bsp143I | GATC | 4 cut(s) | 369, 628, 964, 976 |
| BspACI | CCGC | 4 cut(s) | 79, 286, 691, 912 |
| BspANI | GGCC | 2 cut(s) | 95, 759 |
| BspFNI | CGCG | 1 cut(s) | 594 |
| BspHI | TCATGA | 1 cut(s) | 481 |
| BspLI | GGNNCC | 4 cut(s) | 281, 611, 713, 772 |
| BspT107I | GGYRCC | 2 cut(s) | 609, 770 |
| BsrI | ACTGG | 2 cut(s) | 49, 244 |
| BssECI | CCNNGG | 1 cut(s) | 555 |
| BssMI | GATC | 4 cut(s) | 369, 628, 964, 976 |
| BssNI | GRCGYC | 2 cut(s) | 610, 771 |
| BssSI | CACGAG | 1 cut(s) | 894 |
| Bst2BI | CACGAG | 1 cut(s) | 894 |
| Bst2UI | CCWGG | 2 cut(s) | 107, 131 |
| Bst4CI | ACNGT | 2 cut(s) | 145, 460 |
| Bst6I | CTCTTC | 1 cut(s) | 712 |
| BstACI | GRCGYC | 2 cut(s) | 610, 771 |
| BstC8I | GCNNGC | 2 cut(s) | 83, 153 |
| BstDEI | CTNAG | 3 cut(s) | 435, 632, 783 |
| BstDSI | CCRYGG | 1 cut(s) | 555 |
| BstEII | GGTNACC | 1 cut(s) | 686 |
| BstF5I | GGATG | 2 cut(s) | 210, 238 |
| BstFNI | CGCG | 1 cut(s) | 594 |
| BstH2I | RGCGCY | 2 cut(s) | 613, 774 |
| BstHHI | GCGC | 3 cut(s) | 596, 612, 773 |
| BstKTI | GATC | 4 cut(s) | 372, 631, 967, 979 |
| BstMAI | GTCTC | 1 cut(s) | 421 |
| BstMBI | GATC | 4 cut(s) | 369, 628, 964, 976 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 167, 176, 188, 197, 616, 809, 920, 941 |
| BstNI | CCWGG | 2 cut(s) | 107, 131 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 27 |
| BstPI | GGTNACC | 1 cut(s) | 686 |
| BstSCI | CCNGG | 2 cut(s) | 105, 129 |
| BstSFI | CTRYAG | 1 cut(s) | 459 |
| BstSLI | GKGCMC | 1 cut(s) | 880 |
| BstUI | CGCG | 1 cut(s) | 594 |
| BstV1I | GCAGC | 1 cut(s) | 191 |
| BstV2I | GAAGAC | 2 cut(s) | 273, 401 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 767 |
| BsuI | GTATCC | 1 cut(s) | 631 |
| BsuRI | GGCC | 2 cut(s) | 95, 759 |
| BtgI | CCRYGG | 1 cut(s) | 555 |
| BtgZI | GCGATG | 1 cut(s) | 395 |
| BtrI | CACGTC | 1 cut(s) | 136 |
| BtsCI | GGATG | 2 cut(s) | 210, 238 |
| Cac8I | GCNNGC | 2 cut(s) | 83, 153 |
| CciI | TCATGA | 1 cut(s) | 481 |
| CfoI | GCGC | 3 cut(s) | 596, 612, 773 |
| Cfr13I | GGNCC | 1 cut(s) | 656 |
| CseI | GACGC | 1 cut(s) | 809 |
| Csp6I | GTAC | 1 cut(s) | 247 |
| CviAII | CATG | 5 cut(s) | 452, 482, 518, 708, 761 |
| CviQI | GTAC | 1 cut(s) | 247 |
| DdeI | CTNAG | 3 cut(s) | 435, 632, 783 |
| DinI | GGCGCC | 2 cut(s) | 611, 772 |
| DpnI | GATC | 4 cut(s) | 371, 630, 966, 978 |
| DpnII | GATC | 4 cut(s) | 369, 628, 964, 976 |
| DraIII | CACNNNGTG | 1 cut(s) | 952 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 654, 905 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 654, 905 |
| EaeI | YGGCCR | 1 cut(s) | 757 |
| Eam1104I | CTCTTC | 1 cut(s) | 712 |
| EarI | CTCTTC | 1 cut(s) | 712 |
| EciI | GGCGGA | 1 cut(s) | 68 |
| Ecl136II | GAGCTC | 1 cut(s) | 893 |
| Eco24I | GRGCYC | 1 cut(s) | 895 |
| Eco32I | GATATC | 2 cut(s) | 56, 552 |
| Eco47I | GGWCC | 1 cut(s) | 656 |
| Eco53kI | GAGCTC | 1 cut(s) | 893 |
| Eco88I | CYCGRG | 1 cut(s) | 119 |
| Eco91I | GGTNACC | 1 cut(s) | 686 |
| EcoICRI | GAGCTC | 1 cut(s) | 893 |
| EcoO65I | GGTNACC | 1 cut(s) | 686 |
| EcoRI | GAATTC | 2 cut(s) | 353, 447 |
| EcoRII | CCWGG | 2 cut(s) | 105, 129 |
| EcoRV | GATATC | 2 cut(s) | 56, 552 |
| EcoT38I | GRGCYC | 1 cut(s) | 895 |
| EgeI | GGCGCC | 2 cut(s) | 611, 772 |
| EheI | GGCGCC | 2 cut(s) | 611, 772 |
| Esp3I | CGTCTC | 1 cut(s) | 421 |
| FaeI | CATG | 5 cut(s) | 455, 485, 521, 711, 764 |
| FatI | CATG | 5 cut(s) | 451, 481, 517, 707, 760 |
| Fnu4HI | GCNGC | 1 cut(s) | 180 |
| FokI | GGATG | 2 cut(s) | 197, 245 |
| FriOI | GRGCYC | 1 cut(s) | 895 |
| Fsp4HI | GCNGC | 1 cut(s) | 180 |
| FspBI | CTAG | 3 cut(s) | 126, 905, 980 |
| GlaI | GCGC | 3 cut(s) | 595, 611, 772 |
| GluI | GCNGC | 1 cut(s) | 180 |
| GsuI | CTGGAG | 1 cut(s) | 227 |
| HaeII | RGCGCY | 2 cut(s) | 613, 774 |
| HaeIII | GGCC | 2 cut(s) | 95, 759 |
| HgaI | GACGC | 1 cut(s) | 809 |
| HhaI | GCGC | 3 cut(s) | 596, 612, 773 |
| Hin1I | GRCGYC | 2 cut(s) | 610, 771 |
| Hin1II | CATG | 5 cut(s) | 455, 485, 521, 711, 764 |
| Hin6I | GCGC | 3 cut(s) | 594, 610, 771 |
| HinP1I | GCGC | 3 cut(s) | 594, 610, 771 |
| HincII | GTYRAC | 1 cut(s) | 725 |
| HindII | GTYRAC | 1 cut(s) | 725 |
| HindIII | AAGCTT | 1 cut(s) | 159 |
| HinfI | GANTC | 6 cut(s) | 102, 115, 122, 236, 397, 578 |
| HphI | GGTGA | 2 cut(s) | 901, 986 |
| Hpy166II | GTNNAC | 1 cut(s) | 725 |
| Hpy188I | TCNGA | 1 cut(s) | 325 |
| Hpy8I | GTNNAC | 1 cut(s) | 725 |
| HpyAV | CCTTC | 4 cut(s) | 270, 677, 737, 965 |
| HpyCH4III | ACNGT | 2 cut(s) | 145, 460 |
| HpyCH4IV | ACGT | 3 cut(s) | 135, 649, 727 |
| HpyCH4V | TGCA | 1 cut(s) | 422 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 167, 176, 188, 197, 616, 809, 920, 941 |
| HpyF3I | CTNAG | 3 cut(s) | 435, 632, 783 |
| HpySE526I | ACGT | 3 cut(s) | 135, 649, 727 |
| Hsp92I | GRCGYC | 2 cut(s) | 610, 771 |
| Hsp92II | CATG | 5 cut(s) | 455, 485, 521, 711, 764 |
| HspAI | GCGC | 3 cut(s) | 594, 610, 771 |
| KasI | GGCGCC | 2 cut(s) | 609, 770 |
| Kzo9I | GATC | 4 cut(s) | 369, 628, 964, 976 |
| LmnI | GCTCC | 2 cut(s) | 285, 494 |
| Lsp1109I | GCAGC | 1 cut(s) | 191 |
| LweI | GCATC | 2 cut(s) | 94, 367 |
| MaeI | CTAG | 3 cut(s) | 126, 905, 980 |
| MaeII | ACGT | 3 cut(s) | 135, 649, 727 |
| MaeIII | GTNAC | 5 cut(s) | 5, 454, 686, 896, 907 |
| MalI | GATC | 4 cut(s) | 371, 630, 966, 978 |
| MboI | GATC | 4 cut(s) | 369, 628, 964, 976 |
| MboII | GAAGA | 6 cut(s) | 275, 278, 406, 547, 729, 974 |
| MhlI | GDGCHC | 2 cut(s) | 880, 895 |
| MlsI | TGGCCA | 1 cut(s) | 759 |
| MluCI | AATT | 5 cut(s) | 17, 216, 353, 447, 583 |
| MluNI | TGGCCA | 1 cut(s) | 759 |
| Mly113I | GGCGCC | 2 cut(s) | 610, 771 |
| MlyI | GAGTC | 2 cut(s) | 131, 391 |
| MnlI | CCTC | 7 cut(s) | 181, 293, 599, 713, 733, 763, 825 |
| Mox20I | TGGCCA | 1 cut(s) | 759 |
| MroXI | GAANNNNTTC | 1 cut(s) | 330 |
| MscI | TGGCCA | 1 cut(s) | 759 |
| MseI | TTAA | 2 cut(s) | 339, 347 |
| MslI | CAYNNNNRTG | 2 cut(s) | 765, 795 |
| Msp20I | TGGCCA | 1 cut(s) | 759 |
| MspR9I | CCNGG | 2 cut(s) | 107, 131 |
| MvaI | CCWGG | 2 cut(s) | 107, 131 |
| MvnI | CGCG | 1 cut(s) | 594 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 167, 176, 188, 197, 616, 809, 920, 941 |
| NarI | GGCGCC | 2 cut(s) | 610, 771 |
| NdeII | GATC | 4 cut(s) | 369, 628, 964, 976 |
| NlaIII | CATG | 5 cut(s) | 455, 485, 521, 711, 764 |
| NlaIV | GGNNCC | 4 cut(s) | 281, 611, 713, 772 |
| NmuCI | GTSAC | 2 cut(s) | 896, 907 |
| PaeR7I | CTCGAG | 1 cut(s) | 119 |
| PagI | TCATGA | 1 cut(s) | 481 |
| PdmI | GAANNNNTTC | 1 cut(s) | 330 |
| PfeI | GAWTC | 4 cut(s) | 102, 115, 236, 578 |
| PfoI | TCCNGGA | 1 cut(s) | 105 |
| PkrI | GCNGC | 1 cut(s) | 181 |
| PleI | GAGTC | 2 cut(s) | 130, 391 |
| PluTI | GGCGCC | 2 cut(s) | 613, 774 |
| PpsI | GAGTC | 2 cut(s) | 130, 391 |
| PshAI | GACNNNNGTC | 1 cut(s) | 27 |
| Psp124BI | GAGCTC | 1 cut(s) | 895 |
| Psp6I | CCWGG | 2 cut(s) | 105, 129 |
| PspEI | GGTNACC | 1 cut(s) | 686 |
| PspGI | CCWGG | 2 cut(s) | 105, 129 |
| PspN4I | GGNNCC | 4 cut(s) | 281, 611, 713, 772 |
| PspPI | GGNCC | 1 cut(s) | 656 |
| RsaI | GTAC | 1 cut(s) | 248 |
| RsaNI | GTAC | 1 cut(s) | 247 |
| RseI | CAYNNNNRTG | 2 cut(s) | 765, 795 |
| SacI | GAGCTC | 1 cut(s) | 895 |
| SaqAI | TTAA | 2 cut(s) | 339, 347 |
| SatI | GCNGC | 1 cut(s) | 180 |
| Sau3AI | GATC | 4 cut(s) | 369, 628, 964, 976 |
| Sau96I | GGNCC | 1 cut(s) | 656 |
| SchI | GAGTC | 2 cut(s) | 131, 391 |
| ScrFI | CCNGG | 2 cut(s) | 107, 131 |
| SduI | GDGCHC | 2 cut(s) | 880, 895 |
| SfaNI | GCATC | 2 cut(s) | 94, 367 |
| SfcI | CTRYAG | 1 cut(s) | 459 |
| SfoI | GGCGCC | 2 cut(s) | 611, 772 |
| Sfr274I | CTCGAG | 1 cut(s) | 119 |
| SinI | GGWCC | 1 cut(s) | 656 |
| SlaI | CTCGAG | 1 cut(s) | 119 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 765, 795 |
| SmlI | CTYRAG | 3 cut(s) | 89, 119, 156 |
| SmoI | CTYRAG | 3 cut(s) | 89, 119, 156 |
| SpeI | ACTAGT | 1 cut(s) | 904 |
| Sse9I | AATT | 5 cut(s) | 17, 216, 353, 447, 583 |
| SsiI | CCGC | 4 cut(s) | 79, 286, 691, 912 |
| SspDI | GGCGCC | 2 cut(s) | 609, 770 |
| SspMI | CTAG | 3 cut(s) | 126, 905, 980 |
| SstI | GAGCTC | 1 cut(s) | 895 |
| StyD4I | CCNGG | 2 cut(s) | 105, 129 |
| TaaI | ACNGT | 2 cut(s) | 145, 460 |
| TaiI | ACGT | 3 cut(s) | 138, 652, 730 |
| TaqI | TCGA | 5 cut(s) | 120, 147, 445, 548, 853 |
| TasI | AATT | 5 cut(s) | 17, 216, 353, 447, 583 |
| TfiI | GAWTC | 4 cut(s) | 102, 115, 236, 578 |
| Tru1I | TTAA | 2 cut(s) | 339, 347 |
| Tru9I | TTAA | 2 cut(s) | 339, 347 |
| TseFI | GTSAC | 2 cut(s) | 896, 907 |
| TseI | GCWGC | 1 cut(s) | 179 |
| Tsp45I | GTSAC | 2 cut(s) | 896, 907 |
| TspDTI | ATGAA | 5 cut(s) | 272, 276, 440, 470, 515 |
| TspGWI | ACGGA | 1 cut(s) | 544 |
| VpaK11BI | GGWCC | 1 cut(s) | 656 |
| XapI | RAATTY | 2 cut(s) | 353, 447 |
| XbaI | TCTAGA | 1 cut(s) | 979 |
| XhoI | CTCGAG | 1 cut(s) | 119 |
| XmnI | GAANNNNTTC | 1 cut(s) | 330 |
| XspI | CTAG | 3 cut(s) | 126, 905, 980 |