No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 104 |
| AatII | GACGTC | 1 cut(s) | 57 |
| AccB1I | GGYRCC | 1 cut(s) | 813 |
| AccI | GTMKAC | 1 cut(s) | 519 |
| AccIII | TCCGGA | 1 cut(s) | 778 |
| AciI | CCGC | 2 cut(s) | 48, 490 |
| AclWI | GGATC | 2 cut(s) | 680, 750 |
| AcsI | RAATTY | 2 cut(s) | 231, 557 |
| AcyI | GRCGYC | 3 cut(s) | 54, 81, 814 |
| AfaI | GTAC | 2 cut(s) | 198, 377 |
| AgsI | TTSAA | 1 cut(s) | 505 |
| AjiI | CACGTC | 3 cut(s) | 69, 106, 265 |
| AjnI | CCWGG | 1 cut(s) | 258 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 417, 449 |
| AluBI | AGCT | 4 cut(s) | 284, 290, 691, 701 |
| AluI | AGCT | 4 cut(s) | 284, 290, 691, 701 |
| Alw21I | GWGCWC | 1 cut(s) | 693 |
| Alw26I | GTCTC | 2 cut(s) | 421, 625 |
| AlwI | GGATC | 2 cut(s) | 680, 750 |
| Ama87I | CYCGRG | 3 cut(s) | 16, 22, 248 |
| Aor13HI | TCCGGA | 1 cut(s) | 778 |
| AoxI | GGCC | 1 cut(s) | 222 |
| ApeKI | GCWGC | 1 cut(s) | 308 |
| ApoI | RAATTY | 2 cut(s) | 231, 557 |
| AspLEI | GCGC | 1 cut(s) | 816 |
| AvaI | CYCGRG | 3 cut(s) | 16, 22, 248 |
| BaeGI | GKGCMC | 1 cut(s) | 802 |
| BanI | GGYRCC | 1 cut(s) | 813 |
| BanII | GRGCYC | 3 cut(s) | 17, 23, 693 |
| BbsI | GAAGAC | 2 cut(s) | 402, 605 |
| Bbv12I | GWGCWC | 1 cut(s) | 693 |
| BbvI | GCAGC | 1 cut(s) | 320 |
| BccI | CCATC | 4 cut(s) | 344, 471, 625, 663 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 644, 678 |
| BciT130I | CCWGG | 1 cut(s) | 260 |
| BciVI | GTATCC | 1 cut(s) | 835 |
| BcoDI | GTCTC | 2 cut(s) | 421, 625 |
| BfaI | CTAG | 2 cut(s) | 255, 467 |
| BfoI | RGCGCY | 1 cut(s) | 817 |
| BfuI | GTATCC | 1 cut(s) | 835 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 317 |
| BisI | GCNGC | 2 cut(s) | 48, 309 |
| BlsI | GCNGC | 2 cut(s) | 49, 310 |
| Bme1390I | CCNGG | 1 cut(s) | 260 |
| BmeT110I | CYCGRG | 3 cut(s) | 16, 22, 248 |
| BmgBI | CACGTC | 3 cut(s) | 69, 106, 265 |
| BmiI | GGNNCC | 1 cut(s) | 815 |
| BmrFI | CCNGG | 1 cut(s) | 260 |
| BmsI | GCATC | 3 cut(s) | 83, 223, 571 |
| BpiI | GAAGAC | 2 cut(s) | 402, 605 |
| BpmI | CTGGAG | 1 cut(s) | 356 |
| BpuEI | CTTGAG | 2 cut(s) | 203, 270 |
| Bsa29I | ATCGAT | 1 cut(s) | 654 |
| BsaHI | GRCGYC | 3 cut(s) | 54, 81, 814 |
| BsaI | GGTCTC | 1 cut(s) | 421 |
| BsaJI | CCNNGG | 1 cut(s) | 759 |
| BsaWI | WCCGGW | 1 cut(s) | 778 |
| Bse1I | ACTGG | 2 cut(s) | 178, 373 |
| BseAI | TCCGGA | 1 cut(s) | 778 |
| BseBI | CCWGG | 1 cut(s) | 260 |
| BseCI | ATCGAT | 1 cut(s) | 654 |
| BseDI | CCNNGG | 1 cut(s) | 759 |
| BseGI | GGATG | 1 cut(s) | 339 |
| BseNI | ACTGG | 2 cut(s) | 178, 373 |
| BseSI | GKGCMC | 1 cut(s) | 802 |
| BseXI | GCAGC | 1 cut(s) | 320 |
| BshFI | GGCC | 1 cut(s) | 224 |
| BshNI | GGYRCC | 1 cut(s) | 813 |
| BshVI | ATCGAT | 1 cut(s) | 654 |
| BsiHKAI | GWGCWC | 1 cut(s) | 693 |
| BsiHKCI | CYCGRG | 3 cut(s) | 16, 22, 248 |
| BsiSI | CCGG | 1 cut(s) | 779 |
| BsmAI | GTCTC | 2 cut(s) | 421, 625 |
| BsmBI | CGTCTC | 1 cut(s) | 625 |
| BsnI | GGCC | 1 cut(s) | 224 |
| Bso31I | GGTCTC | 1 cut(s) | 421 |
| BsoBI | CYCGRG | 3 cut(s) | 16, 22, 248 |
| Bsp1286I | GDGCHC | 4 cut(s) | 17, 23, 693, 802 |
| Bsp13I | TCCGGA | 1 cut(s) | 778 |
| Bsp143I | GATC | 4 cut(s) | 118, 573, 672, 755 |
| BspACI | CCGC | 2 cut(s) | 48, 490 |
| BspANI | GGCC | 1 cut(s) | 224 |
| BspDI | ATCGAT | 1 cut(s) | 654 |
| BspEI | TCCGGA | 1 cut(s) | 778 |
| BspHI | TCATGA | 1 cut(s) | 685 |
| BspLI | GGNNCC | 1 cut(s) | 815 |
| BspPI | GGATC | 2 cut(s) | 680, 750 |
| BspT107I | GGYRCC | 1 cut(s) | 813 |
| BspTNI | GGTCTC | 1 cut(s) | 421 |
| BsrI | ACTGG | 2 cut(s) | 178, 373 |
| BssECI | CCNNGG | 1 cut(s) | 759 |
| BssMI | GATC | 4 cut(s) | 118, 573, 672, 755 |
| BssNI | GRCGYC | 3 cut(s) | 54, 81, 814 |
| Bst2UI | CCWGG | 1 cut(s) | 260 |
| Bst4CI | ACNGT | 1 cut(s) | 274 |
| BstACI | GRCGYC | 3 cut(s) | 54, 81, 814 |
| BstC8I | GCNNGC | 1 cut(s) | 282 |
| BstDEI | CTNAG | 4 cut(s) | 61, 313, 804, 836 |
| BstDSI | CCRYGG | 1 cut(s) | 759 |
| BstF5I | GGATG | 1 cut(s) | 339 |
| BstH2I | RGCGCY | 1 cut(s) | 817 |
| BstHHI | GCGC | 1 cut(s) | 816 |
| BstKTI | GATC | 4 cut(s) | 121, 576, 675, 758 |
| BstMAI | GTCTC | 2 cut(s) | 421, 625 |
| BstMBI | GATC | 4 cut(s) | 118, 573, 672, 755 |
| BstNI | CCWGG | 1 cut(s) | 260 |
| BstNSI | RCATGY | 1 cut(s) | 117 |
| BstSCI | CCNGG | 1 cut(s) | 258 |
| BstSLI | GKGCMC | 1 cut(s) | 802 |
| BstV1I | GCAGC | 1 cut(s) | 320 |
| BstV2I | GAAGAC | 2 cut(s) | 402, 605 |
| BstX2I | RGATCY | 1 cut(s) | 755 |
| BstYI | RGATCY | 1 cut(s) | 755 |
| Bsu15I | ATCGAT | 1 cut(s) | 654 |
| BsuI | GTATCC | 1 cut(s) | 835 |
| BsuRI | GGCC | 1 cut(s) | 224 |
| BsuTUI | ATCGAT | 1 cut(s) | 654 |
| BtgI | CCRYGG | 1 cut(s) | 759 |
| BtgZI | GCGATG | 1 cut(s) | 599 |
| BtrI | CACGTC | 3 cut(s) | 69, 106, 265 |
| BtsCI | GGATG | 1 cut(s) | 339 |
| Cac8I | GCNNGC | 1 cut(s) | 282 |
| CciI | TCATGA | 1 cut(s) | 685 |
| CfoI | GCGC | 1 cut(s) | 816 |
| ClaI | ATCGAT | 1 cut(s) | 654 |
| CseI | GACGC | 1 cut(s) | 89 |
| Csp6I | GTAC | 2 cut(s) | 197, 376 |
| CviAII | CATG | 5 cut(s) | 114, 200, 686, 722, 768 |
| CviQI | GTAC | 2 cut(s) | 197, 376 |
| DdeI | CTNAG | 4 cut(s) | 61, 313, 804, 836 |
| DinI | GGCGCC | 1 cut(s) | 815 |
| DpnI | GATC | 4 cut(s) | 120, 575, 674, 757 |
| DpnII | GATC | 4 cut(s) | 118, 573, 672, 755 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 104 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 104 |
| Ecl136II | GAGCTC | 1 cut(s) | 691 |
| Eco24I | GRGCYC | 3 cut(s) | 17, 23, 693 |
| Eco31I | GGTCTC | 1 cut(s) | 421 |
| Eco32I | GATATC | 1 cut(s) | 185 |
| Eco53kI | GAGCTC | 1 cut(s) | 691 |
| Eco88I | CYCGRG | 3 cut(s) | 16, 22, 248 |
| EcoICRI | GAGCTC | 1 cut(s) | 691 |
| EcoRI | GAATTC | 1 cut(s) | 557 |
| EcoRII | CCWGG | 1 cut(s) | 258 |
| EcoRV | GATATC | 1 cut(s) | 185 |
| EcoT38I | GRGCYC | 3 cut(s) | 17, 23, 693 |
| EgeI | GGCGCC | 1 cut(s) | 815 |
| EheI | GGCGCC | 1 cut(s) | 815 |
| Esp3I | CGTCTC | 1 cut(s) | 625 |
| FaeI | CATG | 5 cut(s) | 117, 203, 689, 725, 771 |
| FatI | CATG | 5 cut(s) | 113, 199, 685, 721, 767 |
| FauNDI | CATATG | 1 cut(s) | 357 |
| FblI | GTMKAC | 1 cut(s) | 519 |
| Fnu4HI | GCNGC | 2 cut(s) | 48, 309 |
| FokI | GGATG | 1 cut(s) | 326 |
| FriOI | GRGCYC | 3 cut(s) | 17, 23, 693 |
| Fsp4HI | GCNGC | 2 cut(s) | 48, 309 |
| FspBI | CTAG | 2 cut(s) | 255, 467 |
| GlaI | GCGC | 1 cut(s) | 815 |
| GluI | GCNGC | 2 cut(s) | 48, 309 |
| GsuI | CTGGAG | 1 cut(s) | 356 |
| HaeII | RGCGCY | 1 cut(s) | 817 |
| HaeIII | GGCC | 1 cut(s) | 224 |
| HapII | CCGG | 1 cut(s) | 779 |
| HgaI | GACGC | 1 cut(s) | 89 |
| HhaI | GCGC | 1 cut(s) | 816 |
| Hin1I | GRCGYC | 3 cut(s) | 54, 81, 814 |
| Hin1II | CATG | 5 cut(s) | 117, 203, 689, 725, 771 |
| Hin6I | GCGC | 1 cut(s) | 814 |
| HinP1I | GCGC | 1 cut(s) | 814 |
| HindIII | AAGCTT | 1 cut(s) | 288 |
| HinfI | GANTC | 7 cut(s) | 244, 349, 365, 449, 601, 651, 782 |
| HpaII | CCGG | 1 cut(s) | 779 |
| Hpy166II | GTNNAC | 2 cut(s) | 208, 520 |
| Hpy188I | TCNGA | 1 cut(s) | 79 |
| Hpy188III | TCNNGA | 8 cut(s) | 180, 236, 248, 461, 686, 753, 779, 849 |
| Hpy8I | GTNNAC | 2 cut(s) | 208, 520 |
| HpyAV | CCTTC | 2 cut(s) | 399, 804 |
| HpyCH4III | ACNGT | 1 cut(s) | 274 |
| HpyCH4IV | ACGT | 6 cut(s) | 54, 68, 86, 105, 264, 441 |
| HpyCH4V | TGCA | 2 cut(s) | 626, 665 |
| HpyF3I | CTNAG | 4 cut(s) | 61, 313, 804, 836 |
| HpySE526I | ACGT | 6 cut(s) | 54, 68, 86, 105, 264, 441 |
| Hsp92I | GRCGYC | 3 cut(s) | 54, 81, 814 |
| Hsp92II | CATG | 5 cut(s) | 117, 203, 689, 725, 771 |
| HspAI | GCGC | 1 cut(s) | 814 |
| KasI | GGCGCC | 1 cut(s) | 813 |
| Kpn2I | TCCGGA | 1 cut(s) | 778 |
| Kzo9I | GATC | 4 cut(s) | 118, 573, 672, 755 |
| LmnI | GCTCC | 3 cut(s) | 163, 375, 698 |
| Lsp1109I | GCAGC | 1 cut(s) | 320 |
| LweI | GCATC | 3 cut(s) | 83, 223, 571 |
| MaeI | CTAG | 2 cut(s) | 255, 467 |
| MaeII | ACGT | 6 cut(s) | 54, 68, 86, 105, 264, 441 |
| MaeIII | GTNAC | 3 cut(s) | 134, 446, 658 |
| MalI | GATC | 4 cut(s) | 120, 575, 674, 757 |
| MboI | GATC | 4 cut(s) | 118, 573, 672, 755 |
| MboII | GAAGA | 5 cut(s) | 404, 407, 437, 610, 751 |
| MflI | RGATCY | 1 cut(s) | 755 |
| MhlI | GDGCHC | 4 cut(s) | 17, 23, 693, 802 |
| MluCI | AATT | 5 cut(s) | 146, 231, 557, 748, 787 |
| Mly113I | GGCGCC | 1 cut(s) | 814 |
| MlyI | GAGTC | 3 cut(s) | 343, 443, 595 |
| MnlI | CCTC | 2 cut(s) | 310, 497 |
| MroI | TCCGGA | 1 cut(s) | 778 |
| MseI | TTAA | 3 cut(s) | 543, 551, 639 |
| MslI | CAYNNNNRTG | 2 cut(s) | 344, 360 |
| MspA1I | CMGCKG | 1 cut(s) | 50 |
| MspI | CCGG | 1 cut(s) | 779 |
| MspR9I | CCNGG | 1 cut(s) | 260 |
| MvaI | CCWGG | 1 cut(s) | 260 |
| NarI | GGCGCC | 1 cut(s) | 814 |
| NdeI | CATATG | 1 cut(s) | 357 |
| NdeII | GATC | 4 cut(s) | 118, 573, 672, 755 |
| NlaIII | CATG | 5 cut(s) | 117, 203, 689, 725, 771 |
| NlaIV | GGNNCC | 1 cut(s) | 815 |
| NmeAIII | GCCGAG | 1 cut(s) | 36 |
| NmuCI | GTSAC | 1 cut(s) | 446 |
| NspI | RCATGY | 1 cut(s) | 117 |
| PaeR7I | CTCGAG | 1 cut(s) | 248 |
| PagI | TCATGA | 1 cut(s) | 685 |
| PfeI | GAWTC | 4 cut(s) | 244, 365, 651, 782 |
| PkrI | GCNGC | 2 cut(s) | 49, 310 |
| PleI | GAGTC | 3 cut(s) | 343, 443, 595 |
| PluTI | GGCGCC | 1 cut(s) | 817 |
| PpsI | GAGTC | 3 cut(s) | 343, 443, 595 |
| Psp124BI | GAGCTC | 1 cut(s) | 693 |
| Psp6I | CCWGG | 1 cut(s) | 258 |
| PspGI | CCWGG | 1 cut(s) | 258 |
| PspN4I | GGNNCC | 1 cut(s) | 815 |
| PsuI | RGATCY | 1 cut(s) | 755 |
| RsaI | GTAC | 2 cut(s) | 198, 377 |
| RsaNI | GTAC | 2 cut(s) | 197, 376 |
| RseI | CAYNNNNRTG | 2 cut(s) | 344, 360 |
| SacI | GAGCTC | 1 cut(s) | 693 |
| SaqAI | TTAA | 3 cut(s) | 543, 551, 639 |
| SatI | GCNGC | 2 cut(s) | 48, 309 |
| Sau3AI | GATC | 4 cut(s) | 118, 573, 672, 755 |
| SchI | GAGTC | 3 cut(s) | 343, 443, 595 |
| ScrFI | CCNGG | 1 cut(s) | 260 |
| SduI | GDGCHC | 4 cut(s) | 17, 23, 693, 802 |
| SfaNI | GCATC | 3 cut(s) | 83, 223, 571 |
| SfoI | GGCGCC | 1 cut(s) | 815 |
| Sfr274I | CTCGAG | 1 cut(s) | 248 |
| SlaI | CTCGAG | 1 cut(s) | 248 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 344, 360 |
| SmlI | CTYRAG | 3 cut(s) | 218, 248, 285 |
| SmoI | CTYRAG | 3 cut(s) | 218, 248, 285 |
| Sse9I | AATT | 5 cut(s) | 146, 231, 557, 748, 787 |
| SsiI | CCGC | 2 cut(s) | 48, 490 |
| SspDI | GGCGCC | 1 cut(s) | 813 |
| SspMI | CTAG | 2 cut(s) | 255, 467 |
| SstI | GAGCTC | 1 cut(s) | 693 |
| StyD4I | CCNGG | 1 cut(s) | 258 |
| TaaI | ACNGT | 1 cut(s) | 274 |
| TaiI | ACGT | 6 cut(s) | 57, 71, 89, 108, 267, 444 |
| TaqI | TCGA | 6 cut(s) | 249, 423, 527, 649, 654, 752 |
| TasI | AATT | 5 cut(s) | 146, 231, 557, 748, 787 |
| TauI | GCSGC | 1 cut(s) | 50 |
| TfiI | GAWTC | 4 cut(s) | 244, 365, 651, 782 |
| Tru1I | TTAA | 3 cut(s) | 543, 551, 639 |
| Tru9I | TTAA | 3 cut(s) | 543, 551, 639 |
| TseFI | GTSAC | 1 cut(s) | 446 |
| TseI | GCWGC | 1 cut(s) | 308 |
| Tsp45I | GTSAC | 1 cut(s) | 446 |
| TspDTI | ATGAA | 6 cut(s) | 243, 374, 401, 405, 674, 719 |
| TspGWI | ACGGA | 2 cut(s) | 434, 748 |
| XapI | RAATTY | 2 cut(s) | 231, 557 |
| XceI | RCATGY | 1 cut(s) | 117 |
| XhoI | CTCGAG | 1 cut(s) | 248 |
| XmiI | GTMKAC | 1 cut(s) | 519 |
| XspI | CTAG | 2 cut(s) | 255, 467 |
| ZraI | GACGTC | 1 cut(s) | 55 |