No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Exo_endo_phos | PF03372 | 6 - 127 | 9.4e-06 | Endonuclease/Exonuclease/phosphatase family |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 278 |
| AciI | CCGC | 3 cut(s) | 176, 203, 278 |
| AcuI | CTGAAG | 1 cut(s) | 86 |
| AgsI | TTSAA | 2 cut(s) | 143, 238 |
| AluBI | AGCT | 3 cut(s) | 21, 148, 386 |
| AluI | AGCT | 3 cut(s) | 21, 148, 386 |
| Alw26I | GTCTC | 1 cut(s) | 107 |
| Ama87I | CYCGRG | 1 cut(s) | 57 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 147 |
| AspLEI | GCGC | 2 cut(s) | 64, 265 |
| AsuHPI | GGTGA | 1 cut(s) | 302 |
| AvaI | CYCGRG | 1 cut(s) | 57 |
| BanII | GRGCYC | 3 cut(s) | 211, 219, 303 |
| BcoDI | GTCTC | 1 cut(s) | 107 |
| BfaI | CTAG | 1 cut(s) | 383 |
| BfmI | CTRYAG | 1 cut(s) | 159 |
| BfoI | RGCGCY | 1 cut(s) | 65 |
| BmeT110I | CYCGRG | 1 cut(s) | 57 |
| BmiI | GGNNCC | 1 cut(s) | 302 |
| BmsI | GCATC | 1 cut(s) | 274 |
| BsaWI | WCCGGW | 1 cut(s) | 344 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 170, 200 |
| BseGI | GGATG | 2 cut(s) | 16, 88 |
| Bsh1236I | CGCG | 1 cut(s) | 278 |
| BsiHKCI | CYCGRG | 1 cut(s) | 57 |
| BsiSI | CCGG | 1 cut(s) | 345 |
| BslFI | GGGAC | 1 cut(s) | 210 |
| BsmAI | GTCTC | 1 cut(s) | 107 |
| BsmFI | GGGAC | 1 cut(s) | 210 |
| BsoBI | CYCGRG | 1 cut(s) | 57 |
| Bsp1286I | GDGCHC | 3 cut(s) | 211, 219, 303 |
| Bsp143I | GATC | 2 cut(s) | 349, 388 |
| BspACI | CCGC | 3 cut(s) | 176, 203, 278 |
| BspFNI | CGCG | 1 cut(s) | 278 |
| BspLI | GGNNCC | 1 cut(s) | 302 |
| BssMI | GATC | 2 cut(s) | 349, 388 |
| BstDEI | CTNAG | 1 cut(s) | 17 |
| BstF5I | GGATG | 2 cut(s) | 16, 88 |
| BstFNI | CGCG | 1 cut(s) | 278 |
| BstH2I | RGCGCY | 1 cut(s) | 65 |
| BstHHI | GCGC | 2 cut(s) | 64, 265 |
| BstKTI | GATC | 2 cut(s) | 352, 391 |
| BstMAI | GTCTC | 1 cut(s) | 107 |
| BstMBI | GATC | 2 cut(s) | 349, 388 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 27 |
| BstNSI | RCATGY | 2 cut(s) | 176, 338 |
| BstSFI | CTRYAG | 1 cut(s) | 159 |
| BstUI | CGCG | 1 cut(s) | 278 |
| BtsCI | GGATG | 2 cut(s) | 16, 88 |
| CfoI | GCGC | 2 cut(s) | 64, 265 |
| CseI | GACGC | 1 cut(s) | 284 |
| CviAII | CATG | 2 cut(s) | 173, 335 |
| CviJI | RGCY | 8 cut(s) | 21, 78, 148, 158, 209, 217, 301, 386 |
| CviKI_1 | RGCY | 8 cut(s) | 21, 78, 148, 158, 209, 217, 301, 386 |
| DdeI | CTNAG | 1 cut(s) | 17 |
| DpnI | GATC | 2 cut(s) | 351, 390 |
| DpnII | GATC | 2 cut(s) | 349, 388 |
| Eco24I | GRGCYC | 3 cut(s) | 211, 219, 303 |
| Eco57I | CTGAAG | 1 cut(s) | 86 |
| Eco88I | CYCGRG | 1 cut(s) | 57 |
| EcoT38I | GRGCYC | 3 cut(s) | 211, 219, 303 |
| FaeI | CATG | 2 cut(s) | 176, 338 |
| FaiI | YATR | 7 cut(s) | 84, 109, 161, 174, 270, 330, 336 |
| FaqI | GGGAC | 1 cut(s) | 210 |
| FatI | CATG | 2 cut(s) | 172, 334 |
| FauI | CCCGC | 1 cut(s) | 196 |
| FokI | GGATG | 2 cut(s) | 23, 75 |
| FriOI | GRGCYC | 3 cut(s) | 211, 219, 303 |
| FspBI | CTAG | 1 cut(s) | 383 |
| GlaI | GCGC | 2 cut(s) | 63, 264 |
| HaeII | RGCGCY | 1 cut(s) | 65 |
| HapII | CCGG | 1 cut(s) | 345 |
| HgaI | GACGC | 1 cut(s) | 284 |
| HhaI | GCGC | 2 cut(s) | 64, 265 |
| Hin1II | CATG | 2 cut(s) | 176, 338 |
| Hin6I | GCGC | 2 cut(s) | 62, 263 |
| HinP1I | GCGC | 2 cut(s) | 62, 263 |
| HindIII | AAGCTT | 1 cut(s) | 146 |
| HinfI | GANTC | 3 cut(s) | 241, 293, 395 |
| HpaII | CCGG | 1 cut(s) | 345 |
| HphI | GGTGA | 1 cut(s) | 302 |
| Hpy166II | GTNNAC | 1 cut(s) | 168 |
| Hpy188I | TCNGA | 1 cut(s) | 246 |
| Hpy188III | TCNNGA | 3 cut(s) | 195, 353, 392 |
| Hpy8I | GTNNAC | 1 cut(s) | 168 |
| HpyAV | CCTTC | 1 cut(s) | 61 |
| HpyCH4V | TGCA | 4 cut(s) | 30, 42, 50, 338 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 27 |
| HpyF3I | CTNAG | 1 cut(s) | 17 |
| Hsp92II | CATG | 2 cut(s) | 176, 338 |
| HspAI | GCGC | 2 cut(s) | 62, 263 |
| Kzo9I | GATC | 2 cut(s) | 349, 388 |
| LmnI | GCTCC | 1 cut(s) | 306 |
| LpnPI | CCDG | 9 cut(s) | 7, 140, 185, 197, 282, 317, 338, 358, 377 |
| LweI | GCATC | 1 cut(s) | 274 |
| MaeI | CTAG | 1 cut(s) | 383 |
| MaeIII | GTNAC | 1 cut(s) | 377 |
| MalI | GATC | 2 cut(s) | 351, 390 |
| MboI | GATC | 2 cut(s) | 349, 388 |
| MboII | GAAGA | 2 cut(s) | 146, 250 |
| MhlI | GDGCHC | 3 cut(s) | 211, 219, 303 |
| MluCI | AATT | 2 cut(s) | 25, 257 |
| MnlI | CCTC | 2 cut(s) | 26, 172 |
| MroXI | GAANNNNTTC | 1 cut(s) | 147 |
| MspI | CCGG | 1 cut(s) | 345 |
| MvnI | CGCG | 1 cut(s) | 278 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 27 |
| NdeII | GATC | 2 cut(s) | 349, 388 |
| NlaIII | CATG | 2 cut(s) | 176, 338 |
| NlaIV | GGNNCC | 1 cut(s) | 302 |
| NmuCI | GTSAC | 1 cut(s) | 377 |
| NspI | RCATGY | 2 cut(s) | 176, 338 |
| PdmI | GAANNNNTTC | 1 cut(s) | 147 |
| PfeI | GAWTC | 3 cut(s) | 241, 293, 395 |
| PspN4I | GGNNCC | 1 cut(s) | 302 |
| Sau3AI | GATC | 2 cut(s) | 349, 388 |
| SduI | GDGCHC | 3 cut(s) | 211, 219, 303 |
| SetI | ASST | 5 cut(s) | 23, 37, 150, 384, 388 |
| SfaNI | GCATC | 1 cut(s) | 274 |
| SfcI | CTRYAG | 1 cut(s) | 159 |
| Sse9I | AATT | 2 cut(s) | 25, 257 |
| SsiI | CCGC | 3 cut(s) | 176, 203, 278 |
| SspMI | CTAG | 1 cut(s) | 383 |
| TasI | AATT | 2 cut(s) | 25, 257 |
| TfiI | GAWTC | 3 cut(s) | 241, 293, 395 |
| TseFI | GTSAC | 1 cut(s) | 377 |
| Tsp45I | GTSAC | 1 cut(s) | 377 |
| TspGWI | ACGGA | 1 cut(s) | 365 |
| XceI | RCATGY | 2 cut(s) | 176, 338 |
| XmnI | GAANNNNTTC | 1 cut(s) | 147 |
| XspI | CTAG | 1 cut(s) | 383 |