No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 570 |
| Acc65I | GGTACC | 1 cut(s) | 255 |
| AccB1I | GGYRCC | 3 cut(s) | 255, 373, 1118 |
| AccII | CGCG | 3 cut(s) | 163, 168, 282 |
| AclWI | GGATC | 1 cut(s) | 1067 |
| AcsI | RAATTY | 2 cut(s) | 932, 944 |
| AcyI | GRCGYC | 2 cut(s) | 567, 1200 |
| AfaI | GTAC | 3 cut(s) | 257, 303, 764 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 646, 1144, 1148 |
| AgeI | ACCGGT | 1 cut(s) | 450 |
| AgsI | TTSAA | 2 cut(s) | 892, 1236 |
| AjiI | CACGTC | 3 cut(s) | 616, 633, 652 |
| AjnI | CCWGG | 2 cut(s) | 645, 1204 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 804, 836 |
| AluBI | AGCT | 8 cut(s) | 38, 101, 134, 143, 422, 671, 677, 1088 |
| AluI | AGCT | 8 cut(s) | 38, 101, 134, 143, 422, 671, 677, 1088 |
| Alw26I | GTCTC | 1 cut(s) | 808 |
| AlwI | GGATC | 1 cut(s) | 1067 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 41 |
| AoxI | GGCC | 4 cut(s) | 390, 522, 549, 714 |
| ApeKI | GCWGC | 3 cut(s) | 35, 38, 41 |
| ApoI | RAATTY | 2 cut(s) | 932, 944 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 343, 375 |
| AsiGI | ACCGGT | 1 cut(s) | 450 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 921 |
| Asp718I | GGTACC | 1 cut(s) | 255 |
| AspA2I | CCTAGG | 3 cut(s) | 52, 575, 1142 |
| AspLEI | GCGC | 4 cut(s) | 163, 168, 198, 1080 |
| AspS9I | GGNCC | 4 cut(s) | 523, 550, 579, 603 |
| AsuHPI | GGTGA | 8 cut(s) | 188, 199, 326, 440, 448, 1205, 1213, 1220 |
| AvaII | GGWCC | 2 cut(s) | 579, 603 |
| AvrII | CCTAGG | 3 cut(s) | 52, 575, 1142 |
| BanI | GGYRCC | 3 cut(s) | 255, 373, 1118 |
| BbsI | GAAGAC | 2 cut(s) | 789, 992 |
| BbvI | GCAGC | 3 cut(s) | 25, 28, 47 |
| BccI | CCATC | 6 cut(s) | 731, 858, 1012, 1013, 1172, 1194 |
| BceAI | ACGGC | 1 cut(s) | 1132 |
| BciT130I | CCWGG | 2 cut(s) | 647, 1206 |
| BcoDI | GTCTC | 1 cut(s) | 808 |
| BfaI | CTAG | 6 cut(s) | 53, 96, 138, 576, 854, 1143 |
| BfmI | CTRYAG | 1 cut(s) | 1050 |
| BfoI | RGCGCY | 1 cut(s) | 199 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 216, 704 |
| BisI | GCNGC | 5 cut(s) | 36, 39, 42, 164, 372 |
| BlnI | CCTAGG | 3 cut(s) | 52, 575, 1142 |
| BlsI | GCNGC | 5 cut(s) | 37, 40, 43, 165, 373 |
| Bme1390I | CCNGG | 2 cut(s) | 647, 1206 |
| Bme18I | GGWCC | 2 cut(s) | 579, 603 |
| BmgBI | CACGTC | 3 cut(s) | 616, 633, 652 |
| BmgT120I | GGNCC | 4 cut(s) | 523, 550, 579, 603 |
| BmiI | GGNNCC | 5 cut(s) | 257, 375, 581, 605, 1120 |
| BmrFI | CCNGG | 2 cut(s) | 647, 1206 |
| BmrI | ACTGGG | 1 cut(s) | 17 |
| BmsI | GCATC | 7 cut(s) | 4, 66, 139, 306, 630, 936, 1159 |
| BmuI | ACTGGG | 1 cut(s) | 17 |
| BpiI | GAAGAC | 2 cut(s) | 789, 992 |
| BpmI | CTGGAG | 2 cut(s) | 743, 1170 |
| BpuEI | CTTGAG | 3 cut(s) | 184, 366, 657 |
| BsaHI | GRCGYC | 2 cut(s) | 567, 1200 |
| BsaI | GGTCTC | 1 cut(s) | 808 |
| BsaJI | CCNNGG | 5 cut(s) | 52, 280, 575, 1142, 1204 |
| BsaWI | WCCGGW | 1 cut(s) | 450 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 646, 1144, 1148 |
| Bse118I | RCCGGY | 3 cut(s) | 192, 367, 450 |
| Bse1I | ACTGG | 2 cut(s) | 23, 760 |
| BseBI | CCWGG | 2 cut(s) | 647, 1206 |
| BseDI | CCNNGG | 5 cut(s) | 52, 280, 575, 1142, 1204 |
| BseGI | GGATG | 2 cut(s) | 57, 754 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 646, 1144, 1148 |
| BseMII | CTCAG | 1 cut(s) | 927 |
| BseNI | ACTGG | 2 cut(s) | 23, 760 |
| BseXI | GCAGC | 3 cut(s) | 25, 28, 47 |
| BseYI | CCCAGC | 1 cut(s) | 130 |
| Bsh1236I | CGCG | 3 cut(s) | 163, 168, 282 |
| BshFI | GGCC | 4 cut(s) | 392, 524, 551, 716 |
| BshNI | GGYRCC | 3 cut(s) | 255, 373, 1118 |
| BshTI | ACCGGT | 1 cut(s) | 450 |
| BsiSI | CCGG | 4 cut(s) | 193, 368, 393, 451 |
| BslFI | GGGAC | 1 cut(s) | 1142 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 646, 1144, 1148 |
| BsmAI | GTCTC | 1 cut(s) | 808 |
| BsmFI | GGGAC | 1 cut(s) | 1142 |
| BsnI | GGCC | 4 cut(s) | 392, 524, 551, 716 |
| Bso31I | GGTCTC | 1 cut(s) | 808 |
| Bsp143I | GATC | 3 cut(s) | 178, 960, 1059 |
| BspANI | GGCC | 4 cut(s) | 392, 524, 551, 716 |
| BspCNI | CTCAG | 1 cut(s) | 926 |
| BspFNI | CGCG | 3 cut(s) | 163, 168, 282 |
| BspHI | TCATGA | 1 cut(s) | 1072 |
| BspLI | GGNNCC | 5 cut(s) | 257, 375, 581, 605, 1120 |
| BspPI | GGATC | 1 cut(s) | 1067 |
| BspT107I | GGYRCC | 3 cut(s) | 255, 373, 1118 |
| BspTNI | GGTCTC | 1 cut(s) | 808 |
| BsrFI | RCCGGY | 3 cut(s) | 192, 367, 450 |
| BsrI | ACTGG | 2 cut(s) | 23, 760 |
| BssAI | RCCGGY | 3 cut(s) | 192, 367, 450 |
| BssECI | CCNNGG | 5 cut(s) | 52, 280, 575, 1142, 1204 |
| BssMI | GATC | 3 cut(s) | 178, 960, 1059 |
| BssNI | GRCGYC | 2 cut(s) | 567, 1200 |
| BssT1I | CCWWGG | 3 cut(s) | 52, 575, 1142 |
| Bst2UI | CCWGG | 2 cut(s) | 647, 1206 |
| Bst4CI | ACNGT | 2 cut(s) | 661, 1051 |
| BstACI | GRCGYC | 2 cut(s) | 567, 1200 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 41 |
| BstC8I | GCNNGC | 4 cut(s) | 194, 263, 561, 669 |
| BstDEI | CTNAG | 4 cut(s) | 700, 913, 1026, 1254 |
| BstDSI | CCRYGG | 1 cut(s) | 280 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 644 |
| BstF5I | GGATG | 2 cut(s) | 57, 754 |
| BstFNI | CGCG | 3 cut(s) | 163, 168, 282 |
| BstH2I | RGCGCY | 1 cut(s) | 199 |
| BstHHI | GCGC | 4 cut(s) | 163, 168, 198, 1080 |
| BstKTI | GATC | 3 cut(s) | 181, 963, 1062 |
| BstMAI | GTCTC | 1 cut(s) | 808 |
| BstMBI | GATC | 3 cut(s) | 178, 960, 1059 |
| BstNI | CCWGG | 2 cut(s) | 647, 1206 |
| BstSCI | CCNGG | 2 cut(s) | 645, 1204 |
| BstSFI | CTRYAG | 1 cut(s) | 1050 |
| BstUI | CGCG | 3 cut(s) | 163, 168, 282 |
| BstV1I | GCAGC | 3 cut(s) | 25, 28, 47 |
| BstV2I | GAAGAC | 2 cut(s) | 789, 992 |
| BsuRI | GGCC | 4 cut(s) | 392, 524, 551, 716 |
| BtgI | CCRYGG | 1 cut(s) | 280 |
| BtgZI | GCGATG | 1 cut(s) | 986 |
| BtrI | CACGTC | 3 cut(s) | 616, 633, 652 |
| BtsCI | GGATG | 2 cut(s) | 57, 754 |
| BtsI | GCAGTG | 1 cut(s) | 607 |
| BtsIMutI | CAGTG | 4 cut(s) | 30, 607, 631, 1047 |
| Cac8I | GCNNGC | 4 cut(s) | 194, 263, 561, 669 |
| CaiI | CAGNNNCTG | 1 cut(s) | 41 |
| CciI | TCATGA | 1 cut(s) | 1072 |
| CfoI | GCGC | 4 cut(s) | 163, 168, 198, 1080 |
| Cfr10I | RCCGGY | 3 cut(s) | 192, 367, 450 |
| Cfr13I | GGNCC | 4 cut(s) | 523, 550, 579, 603 |
| Cfr42I | CCGCGG | 1 cut(s) | 283 |
| CseI | GACGC | 2 cut(s) | 157, 1208 |
| Csp6I | GTAC | 3 cut(s) | 256, 302, 763 |
| CspAI | ACCGGT | 1 cut(s) | 450 |
| CviAII | CATG | 4 cut(s) | 833, 1073, 1109, 1190 |
| CviQI | GTAC | 3 cut(s) | 256, 302, 763 |
| DdeI | CTNAG | 4 cut(s) | 700, 913, 1026, 1254 |
| DpnI | GATC | 3 cut(s) | 180, 962, 1061 |
| DpnII | GATC | 3 cut(s) | 178, 960, 1059 |
| EciI | GGCGGA | 2 cut(s) | 632, 1121 |
| Eco130I | CCWWGG | 3 cut(s) | 52, 575, 1142 |
| Eco31I | GGTCTC | 1 cut(s) | 808 |
| Eco47I | GGWCC | 2 cut(s) | 579, 603 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 644 |
| EcoO109I | RGGNCCY | 2 cut(s) | 579, 603 |
| EcoRII | CCWGG | 2 cut(s) | 645, 1204 |
| EcoT14I | CCWWGG | 3 cut(s) | 52, 575, 1142 |
| ErhI | CCWWGG | 3 cut(s) | 52, 575, 1142 |
| FaeI | CATG | 4 cut(s) | 836, 1076, 1112, 1193 |
| FaqI | GGGAC | 1 cut(s) | 1142 |
| FatI | CATG | 4 cut(s) | 832, 1072, 1108, 1189 |
| FauI | CCCGC | 1 cut(s) | 568 |
| FauNDI | CATATG | 1 cut(s) | 744 |
| Fnu4HI | GCNGC | 5 cut(s) | 36, 39, 42, 164, 372 |
| FokI | GGATG | 2 cut(s) | 44, 761 |
| Fsp4HI | GCNGC | 5 cut(s) | 36, 39, 42, 164, 372 |
| FspBI | CTAG | 6 cut(s) | 53, 96, 138, 576, 854, 1143 |
| GlaI | GCGC | 4 cut(s) | 162, 167, 197, 1079 |
| GluI | GCNGC | 5 cut(s) | 36, 39, 42, 164, 372 |
| GsaI | CCCAGC | 1 cut(s) | 134 |
| GsuI | CTGGAG | 2 cut(s) | 743, 1170 |
| HaeII | RGCGCY | 1 cut(s) | 199 |
| HaeIII | GGCC | 4 cut(s) | 392, 524, 551, 716 |
| HapII | CCGG | 4 cut(s) | 193, 368, 393, 451 |
| HgaI | GACGC | 2 cut(s) | 157, 1208 |
| HhaI | GCGC | 4 cut(s) | 163, 168, 198, 1080 |
| Hin1I | GRCGYC | 2 cut(s) | 567, 1200 |
| Hin1II | CATG | 4 cut(s) | 836, 1076, 1112, 1193 |
| Hin6I | GCGC | 4 cut(s) | 161, 166, 196, 1078 |
| HinP1I | GCGC | 4 cut(s) | 161, 166, 196, 1078 |
| HindIII | AAGCTT | 1 cut(s) | 675 |
| HinfI | GANTC | 5 cut(s) | 92, 358, 736, 836, 1038 |
| HpaII | CCGG | 4 cut(s) | 193, 368, 393, 451 |
| HphI | GGTGA | 8 cut(s) | 188, 199, 326, 440, 448, 1205, 1213, 1220 |
| Hpy166II | GTNNAC | 1 cut(s) | 456 |
| Hpy188I | TCNGA | 4 cut(s) | 148, 173, 916, 1249 |
| Hpy188III | TCNNGA | 8 cut(s) | 96, 138, 355, 362, 383, 848, 902, 1073 |
| Hpy8I | GTNNAC | 1 cut(s) | 456 |
| HpyAV | CCTTC | 5 cut(s) | 347, 472, 514, 786, 1009 |
| HpyCH4III | ACNGT | 2 cut(s) | 661, 1051 |
| HpyCH4IV | ACGT | 5 cut(s) | 567, 615, 632, 651, 828 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 44, 79, 110, 1013, 1217 |
| HpyF3I | CTNAG | 4 cut(s) | 700, 913, 1026, 1254 |
| HpySE526I | ACGT | 5 cut(s) | 567, 615, 632, 651, 828 |
| Hsp92I | GRCGYC | 2 cut(s) | 567, 1200 |
| Hsp92II | CATG | 4 cut(s) | 836, 1076, 1112, 1193 |
| HspAI | GCGC | 4 cut(s) | 161, 166, 196, 1078 |
| KpnI | GGTACC | 1 cut(s) | 259 |
| KroI | GCCGGC | 1 cut(s) | 192 |
| KroNI | GCCGGC | 1 cut(s) | 194 |
| KspI | CCGCGG | 1 cut(s) | 283 |
| Kzo9I | GATC | 3 cut(s) | 178, 960, 1059 |
| LmnI | GCTCC | 4 cut(s) | 427, 762, 1085, 1151 |
| Lsp1109I | GCAGC | 3 cut(s) | 25, 28, 47 |
| LweI | GCATC | 7 cut(s) | 4, 66, 139, 306, 630, 936, 1159 |
| MaeI | CTAG | 6 cut(s) | 53, 96, 138, 576, 854, 1143 |
| MaeII | ACGT | 5 cut(s) | 567, 615, 632, 651, 828 |
| MaeIII | GTNAC | 2 cut(s) | 233, 1045 |
| MalI | GATC | 3 cut(s) | 180, 962, 1061 |
| MboI | GATC | 3 cut(s) | 178, 960, 1059 |
| MluCI | AATT | 3 cut(s) | 932, 944, 1030 |
| MlyI | GAGTC | 3 cut(s) | 367, 730, 830 |
| MnlI | CCTC | 7 cut(s) | 167, 390, 444, 593, 650, 697, 884 |
| MroNI | GCCGGC | 1 cut(s) | 192 |
| MroXI | GAANNNNTTC | 1 cut(s) | 921 |
| MseI | TTAA | 1 cut(s) | 938 |
| MslI | CAYNNNNRTG | 6 cut(s) | 9, 314, 731, 747, 1191, 1194 |
| MspA1I | CMGCKG | 4 cut(s) | 38, 261, 282, 563 |
| MspI | CCGG | 4 cut(s) | 193, 368, 393, 451 |
| MspR9I | CCNGG | 2 cut(s) | 647, 1206 |
| MteI | GCGCNGCGC | 1 cut(s) | 164 |
| MvaI | CCWGG | 2 cut(s) | 647, 1206 |
| MvnI | CGCG | 3 cut(s) | 163, 168, 282 |
| NaeI | GCCGGC | 1 cut(s) | 194 |
| NdeI | CATATG | 1 cut(s) | 744 |
| NdeII | GATC | 3 cut(s) | 178, 960, 1059 |
| NgoMIV | GCCGGC | 1 cut(s) | 192 |
| NlaIII | CATG | 4 cut(s) | 836, 1076, 1112, 1193 |
| NlaIV | GGNNCC | 5 cut(s) | 257, 375, 581, 605, 1120 |
| NmuCI | GTSAC | 2 cut(s) | 233, 1045 |
| PagI | TCATGA | 1 cut(s) | 1072 |
| PdiI | GCCGGC | 1 cut(s) | 194 |
| PdmI | GAANNNNTTC | 1 cut(s) | 921 |
| PfeI | GAWTC | 2 cut(s) | 92, 1038 |
| PinAI | ACCGGT | 1 cut(s) | 450 |
| PkrI | GCNGC | 5 cut(s) | 37, 40, 43, 165, 373 |
| PleI | GAGTC | 3 cut(s) | 366, 730, 830 |
| PpsI | GAGTC | 3 cut(s) | 366, 730, 830 |
| PpuMI | RGGWCCY | 2 cut(s) | 579, 603 |
| Psp5II | RGGWCCY | 2 cut(s) | 579, 603 |
| Psp6I | CCWGG | 2 cut(s) | 645, 1204 |
| PspFI | CCCAGC | 1 cut(s) | 130 |
| PspGI | CCWGG | 2 cut(s) | 645, 1204 |
| PspN4I | GGNNCC | 5 cut(s) | 257, 375, 581, 605, 1120 |
| PspPI | GGNCC | 4 cut(s) | 523, 550, 579, 603 |
| PspPPI | RGGWCCY | 2 cut(s) | 579, 603 |
| PstNI | CAGNNNCTG | 1 cut(s) | 41 |
| PvuII | CAGCTG | 1 cut(s) | 38 |
| RsaI | GTAC | 3 cut(s) | 257, 303, 764 |
| RsaNI | GTAC | 3 cut(s) | 256, 302, 763 |
| RseI | CAYNNNNRTG | 6 cut(s) | 9, 314, 731, 747, 1191, 1194 |
| SacII | CCGCGG | 1 cut(s) | 283 |
| SaqAI | TTAA | 1 cut(s) | 938 |
| SatI | GCNGC | 5 cut(s) | 36, 39, 42, 164, 372 |
| Sau3AI | GATC | 3 cut(s) | 178, 960, 1059 |
| Sau96I | GGNCC | 4 cut(s) | 523, 550, 579, 603 |
| SchI | GAGTC | 3 cut(s) | 367, 730, 830 |
| ScrFI | CCNGG | 2 cut(s) | 647, 1206 |
| SfaNI | GCATC | 7 cut(s) | 4, 66, 139, 306, 630, 936, 1159 |
| SfcI | CTRYAG | 1 cut(s) | 1050 |
| Sfr303I | CCGCGG | 1 cut(s) | 283 |
| SgrBI | CCGCGG | 1 cut(s) | 283 |
| SinI | GGWCC | 2 cut(s) | 579, 603 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 9, 314, 731, 747, 1191, 1194 |
| SmlI | CTYRAG | 3 cut(s) | 199, 381, 672 |
| SmoI | CTYRAG | 3 cut(s) | 199, 381, 672 |
| Sse9I | AATT | 3 cut(s) | 932, 944, 1030 |
| SspMI | CTAG | 6 cut(s) | 53, 96, 138, 576, 854, 1143 |
| StyD4I | CCNGG | 2 cut(s) | 645, 1204 |
| StyI | CCWWGG | 3 cut(s) | 52, 575, 1142 |
| TaaI | ACNGT | 2 cut(s) | 661, 1051 |
| TaiI | ACGT | 5 cut(s) | 570, 618, 635, 654, 831 |
| TaqI | TCGA | 2 cut(s) | 810, 1036 |
| TasI | AATT | 3 cut(s) | 932, 944, 1030 |
| TatI | WGTACW | 1 cut(s) | 301 |
| TauI | GCSGC | 2 cut(s) | 166, 374 |
| TfiI | GAWTC | 2 cut(s) | 92, 1038 |
| Tru1I | TTAA | 1 cut(s) | 938 |
| Tru9I | TTAA | 1 cut(s) | 938 |
| TscAI | CASTG | 4 cut(s) | 30, 614, 631, 1054 |
| TseFI | GTSAC | 2 cut(s) | 233, 1045 |
| TseI | GCWGC | 3 cut(s) | 35, 38, 41 |
| Tsp45I | GTSAC | 2 cut(s) | 233, 1045 |
| TspDTI | ATGAA | 6 cut(s) | 105, 135, 788, 792, 1061, 1106 |
| TspGWI | ACGGA | 3 cut(s) | 217, 1072, 1117 |
| TspRI | CASTG | 4 cut(s) | 30, 614, 631, 1054 |
| VpaK11BI | GGWCC | 2 cut(s) | 579, 603 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 644 |
| XapI | RAATTY | 2 cut(s) | 932, 944 |
| XbaI | TCTAGA | 2 cut(s) | 95, 137 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 68, 1145 |
| XmaJI | CCTAGG | 3 cut(s) | 52, 575, 1142 |
| XmnI | GAANNNNTTC | 1 cut(s) | 921 |
| XspI | CTAG | 6 cut(s) | 53, 96, 138, 576, 854, 1143 |
| ZraI | GACGTC | 1 cut(s) | 568 |