B-Box-type zinc finger
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 101 |
| AccBSI | CCGCTC | 1 cut(s) | 479 |
| AccI | GTMKAC | 2 cut(s) | 458, 662 |
| AccII | CGCG | 1 cut(s) | 614 |
| AccIII | TCCGGA | 1 cut(s) | 239 |
| AclWI | GGATC | 2 cut(s) | 15, 712 |
| AcoI | YGGCCR | 1 cut(s) | 723 |
| AcyI | GRCGYC | 4 cut(s) | 102, 189, 471, 617 |
| AfaI | GTAC | 2 cut(s) | 395, 487 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 179, 586 |
| AflIII | ACRYGT | 1 cut(s) | 665 |
| AjiI | CACGTC | 2 cut(s) | 127, 666 |
| AjnI | CCWGG | 1 cut(s) | 720 |
| AluBI | AGCT | 5 cut(s) | 22, 363, 452, 715, 739 |
| AluI | AGCT | 5 cut(s) | 22, 363, 452, 715, 739 |
| Alw21I | GWGCWC | 3 cut(s) | 24, 281, 365 |
| Alw26I | GTCTC | 3 cut(s) | 162, 295, 631 |
| AlwI | GGATC | 2 cut(s) | 15, 712 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 676 |
| Ama87I | CYCGRG | 1 cut(s) | 311 |
| Aor13HI | TCCGGA | 1 cut(s) | 239 |
| AoxI | GGCC | 3 cut(s) | 577, 723, 770 |
| ApeKI | GCWGC | 3 cut(s) | 81, 452, 583 |
| AspLEI | GCGC | 1 cut(s) | 104 |
| AspS9I | GGNCC | 1 cut(s) | 577 |
| AsuC2I | CCSGG | 3 cut(s) | 312, 313, 588 |
| AsuHPI | GGTGA | 2 cut(s) | 536, 646 |
| AvaI | CYCGRG | 1 cut(s) | 311 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 477, 510 |
| BanI | GGYRCC | 1 cut(s) | 101 |
| BanII | GRGCYC | 2 cut(s) | 24, 365 |
| Bbv12I | GWGCWC | 3 cut(s) | 24, 281, 365 |
| BbvI | GCAGC | 3 cut(s) | 68, 439, 570 |
| BceAI | ACGGC | 5 cut(s) | 115, 202, 333, 580, 710 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 142, 176 |
| BciT130I | CCWGG | 1 cut(s) | 722 |
| BcnI | CCSGG | 3 cut(s) | 312, 313, 588 |
| BcoDI | GTCTC | 3 cut(s) | 162, 295, 631 |
| BfaI | CTAG | 2 cut(s) | 90, 779 |
| BfmI | CTRYAG | 1 cut(s) | 347 |
| BfoI | RGCGCY | 1 cut(s) | 105 |
| BisI | GCNGC | 5 cut(s) | 82, 137, 453, 584, 615 |
| BlsI | GCNGC | 5 cut(s) | 83, 138, 454, 585, 616 |
| Bme1390I | CCNGG | 4 cut(s) | 312, 313, 588, 722 |
| BmeT110I | CYCGRG | 1 cut(s) | 311 |
| BmgBI | CACGTC | 2 cut(s) | 127, 666 |
| BmgT120I | GGNCC | 1 cut(s) | 577 |
| BmiI | GGNNCC | 2 cut(s) | 103, 650 |
| BmrFI | CCNGG | 4 cut(s) | 312, 313, 588, 722 |
| BmsI | GCATC | 1 cut(s) | 721 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 221, 253, 594, 626 |
| BpmI | CTGGAG | 1 cut(s) | 277 |
| BpuMI | CCSGG | 3 cut(s) | 312, 313, 588 |
| BsaHI | GRCGYC | 4 cut(s) | 102, 189, 471, 617 |
| BsaI | GGTCTC | 1 cut(s) | 162 |
| BsaJI | CCNNGG | 2 cut(s) | 311, 652 |
| BsaWI | WCCGGW | 2 cut(s) | 239, 413 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 23, 38, 53, 68, 161, 191 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 179, 586 |
| Bse118I | RCCGGY | 2 cut(s) | 579, 706 |
| Bse1I | ACTGG | 1 cut(s) | 209 |
| Bse3DI | GCAATG | 1 cut(s) | 305 |
| BseAI | TCCGGA | 1 cut(s) | 239 |
| BseBI | CCWGG | 1 cut(s) | 722 |
| BseDI | CCNNGG | 2 cut(s) | 311, 652 |
| BseGI | GGATG | 2 cut(s) | 215, 522 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 179, 586 |
| BseMI | GCAATG | 1 cut(s) | 305 |
| BseMII | CTCAG | 2 cut(s) | 668, 743 |
| BseNI | ACTGG | 1 cut(s) | 209 |
| BseRI | GAGGAG | 4 cut(s) | 43, 704, 775, 797 |
| BseXI | GCAGC | 3 cut(s) | 68, 439, 570 |
| BseYI | CCCAGC | 2 cut(s) | 511, 789 |
| BsgI | GTGCAG | 2 cut(s) | 458, 486 |
| Bsh1236I | CGCG | 1 cut(s) | 614 |
| BshFI | GGCC | 3 cut(s) | 579, 725, 772 |
| BshNI | GGYRCC | 1 cut(s) | 101 |
| BsiHKAI | GWGCWC | 3 cut(s) | 24, 281, 365 |
| BsiHKCI | CYCGRG | 1 cut(s) | 311 |
| BsiWI | CGTACG | 1 cut(s) | 393 |
| BslFI | GGGAC | 2 cut(s) | 176, 328 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 179, 586 |
| BsmAI | GTCTC | 3 cut(s) | 162, 295, 631 |
| BsmBI | CGTCTC | 1 cut(s) | 295 |
| BsmFI | GGGAC | 2 cut(s) | 176, 328 |
| BsnI | GGCC | 3 cut(s) | 579, 725, 772 |
| Bso31I | GGTCTC | 1 cut(s) | 162 |
| BsoBI | CYCGRG | 1 cut(s) | 311 |
| Bsp1286I | GDGCHC | 3 cut(s) | 24, 281, 365 |
| Bsp13I | TCCGGA | 1 cut(s) | 239 |
| Bsp143I | GATC | 4 cut(s) | 7, 174, 353, 717 |
| BspANI | GGCC | 3 cut(s) | 579, 725, 772 |
| BspCNI | CTCAG | 2 cut(s) | 669, 744 |
| BspEI | TCCGGA | 1 cut(s) | 239 |
| BspFNI | CGCG | 1 cut(s) | 614 |
| BspLI | GGNNCC | 2 cut(s) | 103, 650 |
| BspMAI | CTGCAG | 1 cut(s) | 351 |
| BspPI | GGATC | 2 cut(s) | 15, 712 |
| BspT107I | GGYRCC | 1 cut(s) | 101 |
| BspTNI | GGTCTC | 1 cut(s) | 162 |
| BsrBI | CCGCTC | 1 cut(s) | 479 |
| BsrDI | GCAATG | 1 cut(s) | 305 |
| BsrFI | RCCGGY | 2 cut(s) | 579, 706 |
| BsrI | ACTGG | 1 cut(s) | 209 |
| BssAI | RCCGGY | 2 cut(s) | 579, 706 |
| BssECI | CCNNGG | 2 cut(s) | 311, 652 |
| BssMI | GATC | 4 cut(s) | 7, 174, 353, 717 |
| BssNI | GRCGYC | 4 cut(s) | 102, 189, 471, 617 |
| Bst2UI | CCWGG | 1 cut(s) | 722 |
| Bst6I | CTCTTC | 1 cut(s) | 422 |
| BstACI | GRCGYC | 4 cut(s) | 102, 189, 471, 617 |
| BstDEI | CTNAG | 2 cut(s) | 677, 752 |
| BstF5I | GGATG | 2 cut(s) | 215, 522 |
| BstFNI | CGCG | 1 cut(s) | 614 |
| BstH2I | RGCGCY | 1 cut(s) | 105 |
| BstHHI | GCGC | 1 cut(s) | 104 |
| BstKTI | GATC | 4 cut(s) | 10, 177, 356, 720 |
| BstMAI | GTCTC | 3 cut(s) | 162, 295, 631 |
| BstMBI | GATC | 4 cut(s) | 7, 174, 353, 717 |
| BstNI | CCWGG | 1 cut(s) | 722 |
| BstNSI | RCATGY | 2 cut(s) | 288, 560 |
| BstSCI | CCNGG | 4 cut(s) | 310, 311, 586, 720 |
| BstSFI | CTRYAG | 1 cut(s) | 347 |
| BstUI | CGCG | 1 cut(s) | 614 |
| BstV1I | GCAGC | 3 cut(s) | 68, 439, 570 |
| BsuRI | GGCC | 3 cut(s) | 579, 725, 772 |
| BtrI | CACGTC | 2 cut(s) | 127, 666 |
| BtsCI | GGATG | 2 cut(s) | 215, 522 |
| BtsIMutI | CAGTG | 1 cut(s) | 202 |
| CaiI | CAGNNNCTG | 1 cut(s) | 676 |
| CfoI | GCGC | 1 cut(s) | 104 |
| Cfr10I | RCCGGY | 2 cut(s) | 579, 706 |
| Cfr13I | GGNCC | 1 cut(s) | 577 |
| Cfr9I | CCCGGG | 1 cut(s) | 311 |
| CseI | GACGC | 5 cut(s) | 178, 277, 444, 479, 606 |
| Csp6I | GTAC | 2 cut(s) | 394, 486 |
| CviAII | CATG | 3 cut(s) | 35, 285, 557 |
| CviQI | GTAC | 2 cut(s) | 394, 486 |
| DdeI | CTNAG | 2 cut(s) | 677, 752 |
| DinI | GGCGCC | 1 cut(s) | 103 |
| DpnI | GATC | 4 cut(s) | 9, 176, 355, 719 |
| DpnII | GATC | 4 cut(s) | 7, 174, 353, 717 |
| EaeI | YGGCCR | 1 cut(s) | 723 |
| Eam1104I | CTCTTC | 1 cut(s) | 422 |
| EarI | CTCTTC | 1 cut(s) | 422 |
| EciI | GGCGGA | 2 cut(s) | 52, 119 |
| Ecl136II | GAGCTC | 2 cut(s) | 22, 363 |
| Eco147I | AGGCCT | 1 cut(s) | 772 |
| Eco24I | GRGCYC | 2 cut(s) | 24, 365 |
| Eco31I | GGTCTC | 1 cut(s) | 162 |
| Eco32I | GATATC | 1 cut(s) | 696 |
| Eco53kI | GAGCTC | 2 cut(s) | 22, 363 |
| Eco88I | CYCGRG | 1 cut(s) | 311 |
| EcoICRI | GAGCTC | 2 cut(s) | 22, 363 |
| EcoRII | CCWGG | 1 cut(s) | 720 |
| EcoRV | GATATC | 1 cut(s) | 696 |
| EcoT38I | GRGCYC | 2 cut(s) | 24, 365 |
| EgeI | GGCGCC | 1 cut(s) | 103 |
| EheI | GGCGCC | 1 cut(s) | 103 |
| Esp3I | CGTCTC | 1 cut(s) | 295 |
| FaeI | CATG | 3 cut(s) | 38, 288, 560 |
| FaiI | YATR | 3 cut(s) | 36, 286, 558 |
| FaqI | GGGAC | 2 cut(s) | 176, 328 |
| FatI | CATG | 3 cut(s) | 34, 284, 556 |
| FauI | CCCGC | 1 cut(s) | 638 |
| FblI | GTMKAC | 2 cut(s) | 458, 662 |
| Fnu4HI | GCNGC | 5 cut(s) | 82, 137, 453, 584, 615 |
| FokI | GGATG | 2 cut(s) | 202, 529 |
| FriOI | GRGCYC | 2 cut(s) | 24, 365 |
| Fsp4HI | GCNGC | 5 cut(s) | 82, 137, 453, 584, 615 |
| FspBI | CTAG | 2 cut(s) | 90, 779 |
| GlaI | GCGC | 1 cut(s) | 103 |
| GluI | GCNGC | 5 cut(s) | 82, 137, 453, 584, 615 |
| GsaI | CCCAGC | 2 cut(s) | 515, 793 |
| GsuI | CTGGAG | 1 cut(s) | 277 |
| HaeII | RGCGCY | 1 cut(s) | 105 |
| HaeIII | GGCC | 3 cut(s) | 579, 725, 772 |
| HgaI | GACGC | 5 cut(s) | 178, 277, 444, 479, 606 |
| HhaI | GCGC | 1 cut(s) | 104 |
| Hin1I | GRCGYC | 4 cut(s) | 102, 189, 471, 617 |
| Hin1II | CATG | 3 cut(s) | 38, 288, 560 |
| Hin6I | GCGC | 1 cut(s) | 102 |
| HinP1I | GCGC | 1 cut(s) | 102 |
| HincII | GTYRAC | 2 cut(s) | 459, 663 |
| HindII | GTYRAC | 2 cut(s) | 459, 663 |
| HinfI | GANTC | 8 cut(s) | 59, 86, 251, 302, 408, 527, 639, 673 |
| HphI | GGTGA | 2 cut(s) | 536, 646 |
| Hpy166II | GTNNAC | 4 cut(s) | 97, 423, 459, 663 |
| Hpy188I | TCNGA | 4 cut(s) | 58, 672, 678, 743 |
| Hpy188III | TCNNGA | 2 cut(s) | 240, 699 |
| Hpy8I | GTNNAC | 4 cut(s) | 97, 423, 459, 663 |
| HpyAV | CCTTC | 2 cut(s) | 76, 675 |
| HpyCH4IV | ACGT | 3 cut(s) | 126, 396, 665 |
| HpyCH4V | TGCA | 7 cut(s) | 27, 153, 349, 439, 467, 504, 556 |
| HpyF3I | CTNAG | 2 cut(s) | 677, 752 |
| HpySE526I | ACGT | 3 cut(s) | 126, 396, 665 |
| Hsp92I | GRCGYC | 4 cut(s) | 102, 189, 471, 617 |
| Hsp92II | CATG | 3 cut(s) | 38, 288, 560 |
| HspAI | GCGC | 1 cut(s) | 102 |
| KasI | GGCGCC | 1 cut(s) | 101 |
| Kpn2I | TCCGGA | 1 cut(s) | 239 |
| KroI | GCCGGC | 2 cut(s) | 579, 706 |
| KroNI | GCCGGC | 2 cut(s) | 581, 708 |
| Kzo9I | GATC | 4 cut(s) | 7, 174, 353, 717 |
| LmnI | GCTCC | 3 cut(s) | 56, 149, 360 |
| Lsp1109I | GCAGC | 3 cut(s) | 68, 439, 570 |
| LweI | GCATC | 1 cut(s) | 721 |
| MaeI | CTAG | 2 cut(s) | 90, 779 |
| MaeII | ACGT | 3 cut(s) | 126, 396, 665 |
| MaeIII | GTNAC | 1 cut(s) | 367 |
| MalI | GATC | 4 cut(s) | 9, 176, 355, 719 |
| MbiI | CCGCTC | 1 cut(s) | 479 |
| MboI | GATC | 4 cut(s) | 7, 174, 353, 717 |
| MboII | GAAGA | 1 cut(s) | 439 |
| MfeI | CAATTG | 1 cut(s) | 148 |
| MhlI | GDGCHC | 3 cut(s) | 24, 281, 365 |
| MluCI | AATT | 2 cut(s) | 148, 496 |
| Mly113I | GGCGCC | 1 cut(s) | 102 |
| MlyI | GAGTC | 3 cut(s) | 53, 80, 633 |
| MmeI | TCCRAC | 1 cut(s) | 81 |
| MroI | TCCGGA | 1 cut(s) | 239 |
| MroNI | GCCGGC | 2 cut(s) | 579, 706 |
| MspA1I | CMGCKG | 2 cut(s) | 81, 136 |
| MspR9I | CCNGG | 4 cut(s) | 312, 313, 588, 722 |
| MunI | CAATTG | 1 cut(s) | 148 |
| MvaI | CCWGG | 1 cut(s) | 722 |
| MvnI | CGCG | 1 cut(s) | 614 |
| NaeI | GCCGGC | 2 cut(s) | 581, 708 |
| NarI | GGCGCC | 1 cut(s) | 102 |
| NciI | CCSGG | 3 cut(s) | 312, 313, 588 |
| NdeII | GATC | 4 cut(s) | 7, 174, 353, 717 |
| NgoMIV | GCCGGC | 2 cut(s) | 579, 706 |
| NlaIII | CATG | 3 cut(s) | 38, 288, 560 |
| NlaIV | GGNNCC | 2 cut(s) | 103, 650 |
| NmeAIII | GCCGAG | 1 cut(s) | 260 |
| NspI | RCATGY | 2 cut(s) | 288, 560 |
| PaeI | GCATGC | 2 cut(s) | 288, 560 |
| PceI | AGGCCT | 1 cut(s) | 772 |
| PcsI | WCGNNNNNNNCGW | 7 cut(s) | 123, 260, 266, 269, 272, 323, 614 |
| PdiI | GCCGGC | 2 cut(s) | 581, 708 |
| PfeI | GAWTC | 5 cut(s) | 251, 302, 408, 527, 673 |
| Pfl23II | CGTACG | 1 cut(s) | 393 |
| PflFI | GACNNNGTC | 1 cut(s) | 188 |
| PkrI | GCNGC | 5 cut(s) | 83, 138, 454, 585, 616 |
| PleI | GAGTC | 3 cut(s) | 53, 80, 633 |
| PluTI | GGCGCC | 1 cut(s) | 105 |
| PpsI | GAGTC | 3 cut(s) | 53, 80, 633 |
| Psp124BI | GAGCTC | 2 cut(s) | 24, 365 |
| Psp6I | CCWGG | 1 cut(s) | 720 |
| PspFI | CCCAGC | 2 cut(s) | 511, 789 |
| PspGI | CCWGG | 1 cut(s) | 720 |
| PspLI | CGTACG | 1 cut(s) | 393 |
| PspN4I | GGNNCC | 2 cut(s) | 103, 650 |
| PspPI | GGNCC | 1 cut(s) | 577 |
| PstI | CTGCAG | 1 cut(s) | 351 |
| PstNI | CAGNNNCTG | 1 cut(s) | 676 |
| PsyI | GACNNNGTC | 1 cut(s) | 188 |
| RsaI | GTAC | 2 cut(s) | 395, 487 |
| RsaNI | GTAC | 2 cut(s) | 394, 486 |
| SacI | GAGCTC | 2 cut(s) | 24, 365 |
| SalI | GTCGAC | 2 cut(s) | 457, 661 |
| SatI | GCNGC | 5 cut(s) | 82, 137, 453, 584, 615 |
| Sau3AI | GATC | 4 cut(s) | 7, 174, 353, 717 |
| Sau96I | GGNCC | 1 cut(s) | 577 |
| SchI | GAGTC | 3 cut(s) | 53, 80, 633 |
| ScrFI | CCNGG | 4 cut(s) | 312, 313, 588, 722 |
| SduI | GDGCHC | 3 cut(s) | 24, 281, 365 |
| SfaNI | GCATC | 1 cut(s) | 721 |
| SfcI | CTRYAG | 1 cut(s) | 347 |
| SfoI | GGCGCC | 1 cut(s) | 103 |
| SmaI | CCCGGG | 1 cut(s) | 313 |
| SphI | GCATGC | 2 cut(s) | 288, 560 |
| Sse9I | AATT | 2 cut(s) | 148, 496 |
| SseBI | AGGCCT | 1 cut(s) | 772 |
| SspDI | GGCGCC | 1 cut(s) | 101 |
| SspMI | CTAG | 2 cut(s) | 90, 779 |
| SstI | GAGCTC | 2 cut(s) | 24, 365 |
| StuI | AGGCCT | 1 cut(s) | 772 |
| StyD4I | CCNGG | 4 cut(s) | 310, 311, 586, 720 |
| TaiI | ACGT | 3 cut(s) | 129, 399, 668 |
| TaqI | TCGA | 2 cut(s) | 458, 662 |
| TasI | AATT | 2 cut(s) | 148, 496 |
| TauI | GCSGC | 2 cut(s) | 139, 617 |
| TfiI | GAWTC | 5 cut(s) | 251, 302, 408, 527, 673 |
| TscAI | CASTG | 1 cut(s) | 209 |
| TseI | GCWGC | 3 cut(s) | 81, 452, 583 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspMI | CCCGGG | 1 cut(s) | 311 |
| TspRI | CASTG | 1 cut(s) | 209 |
| Tth111I | GACNNNGTC | 1 cut(s) | 188 |
| XceI | RCATGY | 2 cut(s) | 288, 560 |
| XmaI | CCCGGG | 1 cut(s) | 311 |
| XmiI | GTMKAC | 2 cut(s) | 458, 662 |
| XspI | CTAG | 2 cut(s) | 90, 779 |