No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1188, 1233 |
| Acc36I | ACCTGC | 4 cut(s) | 376, 484, 512, 540 |
| Acc65I | GGTACC | 1 cut(s) | 1263 |
| AccB1I | GGYRCC | 5 cut(s) | 268, 724, 1263, 1409, 1430 |
| AccBSI | CCGCTC | 1 cut(s) | 1261 |
| AccII | CGCG | 6 cut(s) | 238, 412, 425, 450, 497, 1215 |
| AclWI | GGATC | 4 cut(s) | 106, 744, 1121, 1528 |
| AcoI | YGGCCR | 1 cut(s) | 276 |
| AcsI | RAATTY | 1 cut(s) | 705 |
| AcuI | CTGAAG | 3 cut(s) | 623, 1116, 1695 |
| AcvI | CACGTG | 1 cut(s) | 1370 |
| AcyI | GRCGYC | 5 cut(s) | 78, 137, 269, 420, 793 |
| AdeI | CACNNNGTG | 2 cut(s) | 1355, 1469 |
| AfaI | GTAC | 3 cut(s) | 1093, 1265, 1613 |
| AfeI | AGCGCT | 3 cut(s) | 316, 861, 872 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 285, 332, 667, 996, 1248, 1274, 1318, 1371, 1444 |
| AflIII | ACRYGT | 1 cut(s) | 1367 |
| AgsI | TTSAA | 9 cut(s) | 232, 699, 748, 910, 917, 946, 1194, 1540, 1669 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 946, 1013 |
| AjnI | CCWGG | 2 cut(s) | 720, 1317 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 858, 890 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 728, 760 |
| Alw21I | GWGCWC | 4 cut(s) | 194, 1465, 1474, 1689 |
| Alw44I | GTGCAC | 3 cut(s) | 1461, 1470, 1685 |
| AlwI | GGATC | 4 cut(s) | 106, 744, 1121, 1528 |
| Ama87I | CYCGRG | 5 cut(s) | 165, 193, 242, 263, 305 |
| Aor51HI | AGCGCT | 3 cut(s) | 316, 861, 872 |
| AoxI | GGCC | 4 cut(s) | 276, 390, 1196, 1297 |
| ApaI | GGGCCC | 1 cut(s) | 1301 |
| ApaLI | GTGCAC | 3 cut(s) | 1461, 1470, 1685 |
| ApoI | RAATTY | 1 cut(s) | 705 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 975 |
| Asp718I | GGTACC | 1 cut(s) | 1263 |
| AspA2I | CCTAGG | 1 cut(s) | 1442 |
| AspS9I | GGNCC | 4 cut(s) | 1197, 1297, 1298, 1591 |
| AsuC2I | CCSGG | 1 cut(s) | 734 |
| AsuHPI | GGTGA | 2 cut(s) | 259, 1645 |
| AvaI | CYCGRG | 5 cut(s) | 165, 193, 242, 263, 305 |
| AvaII | GGWCC | 1 cut(s) | 1591 |
| AvrII | CCTAGG | 1 cut(s) | 1442 |
| BaeGI | GKGCMC | 4 cut(s) | 1301, 1465, 1474, 1689 |
| BanI | GGYRCC | 5 cut(s) | 268, 724, 1263, 1409, 1430 |
| BanII | GRGCYC | 4 cut(s) | 166, 194, 306, 1301 |
| BauI | CACGAG | 1 cut(s) | 1117 |
| BbrPI | CACGTG | 1 cut(s) | 1370 |
| Bbv12I | GWGCWC | 4 cut(s) | 194, 1465, 1474, 1689 |
| BccI | CCATC | 6 cut(s) | 11, 342, 491, 519, 696, 1628 |
| BceAI | ACGGC | 4 cut(s) | 69, 199, 263, 507 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 100, 134 |
| BciT130I | CCWGG | 2 cut(s) | 722, 1319 |
| BciVI | GTATCC | 2 cut(s) | 1339, 1400 |
| BcnI | CCSGG | 1 cut(s) | 734 |
| BfaI | CTAG | 5 cut(s) | 618, 863, 1395, 1443, 1565 |
| BfmI | CTRYAG | 5 cut(s) | 330, 477, 505, 533, 1149 |
| BfoI | RGCGCY | 6 cut(s) | 179, 272, 318, 407, 863, 874 |
| BfuAI | ACCTGC | 4 cut(s) | 376, 484, 512, 540 |
| BfuI | GTATCC | 2 cut(s) | 1339, 1400 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 389 |
| BlnI | CCTAGG | 1 cut(s) | 1442 |
| Bme1390I | CCNGG | 3 cut(s) | 722, 734, 1319 |
| Bme18I | GGWCC | 1 cut(s) | 1591 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 946, 1013 |
| BmeT110I | CYCGRG | 5 cut(s) | 165, 193, 242, 263, 305 |
| BmgT120I | GGNCC | 4 cut(s) | 1197, 1297, 1298, 1591 |
| BmiI | GGNNCC | 7 cut(s) | 270, 726, 1265, 1299, 1411, 1432, 1592 |
| BmrFI | CCNGG | 3 cut(s) | 722, 734, 1319 |
| BmsI | GCATC | 2 cut(s) | 777, 1684 |
| BpuEI | CTTGAG | 1 cut(s) | 756 |
| BpuMI | CCSGG | 1 cut(s) | 734 |
| Bsa29I | ATCGAT | 1 cut(s) | 1513 |
| BsaAI | YACGTR | 1 cut(s) | 1370 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1519, 1647 |
| BsaHI | GRCGYC | 5 cut(s) | 78, 137, 269, 420, 793 |
| BsaJI | CCNNGG | 4 cut(s) | 82, 279, 1413, 1442 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1366, 1396, 1423, 1453 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 285, 332, 667, 996, 1248, 1274, 1318, 1371, 1444 |
| Bse118I | RCCGGY | 1 cut(s) | 388 |
| Bse3DI | GCAATG | 3 cut(s) | 886, 1504, 1550 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1519, 1647 |
| BseBI | CCWGG | 2 cut(s) | 722, 1319 |
| BseCI | ATCGAT | 1 cut(s) | 1513 |
| BseDI | CCNNGG | 4 cut(s) | 82, 279, 1413, 1442 |
| BseGI | GGATG | 4 cut(s) | 353, 483, 511, 1699 |
| BseJI | GATNNNNATC | 2 cut(s) | 1519, 1647 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 285, 332, 667, 996, 1248, 1274, 1318, 1371, 1444 |
| BseMI | GCAATG | 3 cut(s) | 886, 1504, 1550 |
| BseMII | CTCAG | 3 cut(s) | 826, 1146, 1586 |
| BseRI | GAGGAG | 2 cut(s) | 385, 887 |
| BseSI | GKGCMC | 4 cut(s) | 1301, 1465, 1474, 1689 |
| BseYI | CCCAGC | 7 cut(s) | 171, 376, 384, 400, 463, 487, 515 |
| BsgI | GTGCAG | 4 cut(s) | 118, 164, 171, 303 |
| Bsh1236I | CGCG | 6 cut(s) | 238, 412, 425, 450, 497, 1215 |
| BshFI | GGCC | 4 cut(s) | 278, 392, 1198, 1299 |
| BshNI | GGYRCC | 5 cut(s) | 268, 724, 1263, 1409, 1430 |
| BshVI | ATCGAT | 1 cut(s) | 1513 |
| BsiHKAI | GWGCWC | 4 cut(s) | 194, 1465, 1474, 1689 |
| BsiHKCI | CYCGRG | 5 cut(s) | 165, 193, 242, 263, 305 |
| BsiSI | CCGG | 2 cut(s) | 389, 734 |
| BslFI | GGGAC | 6 cut(s) | 116, 273, 566, 1293, 1302, 1604 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 285, 332, 667, 996, 1248, 1274, 1318, 1371, 1444 |
| BsmFI | GGGAC | 6 cut(s) | 116, 273, 566, 1293, 1302, 1604 |
| BsmI | GAATGC | 1 cut(s) | 844 |
| BsnI | GGCC | 4 cut(s) | 278, 392, 1198, 1299 |
| BsoBI | CYCGRG | 5 cut(s) | 165, 193, 242, 263, 305 |
| Bsp120I | GGGCCC | 1 cut(s) | 1297 |
| Bsp1286I | GDGCHC | 7 cut(s) | 166, 194, 306, 1301, 1465, 1474, 1689 |
| Bsp143I | GATC | 5 cut(s) | 111, 736, 831, 1113, 1520 |
| Bsp19I | CCATGG | 1 cut(s) | 1413 |
| BspANI | GGCC | 4 cut(s) | 278, 392, 1198, 1299 |
| BspCNI | CTCAG | 3 cut(s) | 825, 1147, 1587 |
| BspDI | ATCGAT | 1 cut(s) | 1513 |
| BspFNI | CGCG | 6 cut(s) | 238, 412, 425, 450, 497, 1215 |
| BspHI | TCATGA | 1 cut(s) | 1219 |
| BspLI | GGNNCC | 7 cut(s) | 270, 726, 1265, 1299, 1411, 1432, 1592 |
| BspMAI | CTGCAG | 4 cut(s) | 334, 481, 509, 537 |
| BspMI | ACCTGC | 4 cut(s) | 376, 484, 512, 540 |
| BspPI | GGATC | 4 cut(s) | 106, 744, 1121, 1528 |
| BspQI | GCTCTTC | 2 cut(s) | 861, 981 |
| BspT107I | GGYRCC | 5 cut(s) | 268, 724, 1263, 1409, 1430 |
| BsrBI | CCGCTC | 1 cut(s) | 1261 |
| BsrDI | GCAATG | 3 cut(s) | 886, 1504, 1550 |
| BsrFI | RCCGGY | 1 cut(s) | 388 |
| BssAI | RCCGGY | 1 cut(s) | 388 |
| BssECI | CCNNGG | 4 cut(s) | 82, 279, 1413, 1442 |
| BssMI | GATC | 5 cut(s) | 111, 736, 831, 1113, 1520 |
| BssNI | GRCGYC | 5 cut(s) | 78, 137, 269, 420, 793 |
| BssSI | CACGAG | 1 cut(s) | 1117 |
| BssT1I | CCWWGG | 2 cut(s) | 1413, 1442 |
| Bst2BI | CACGAG | 1 cut(s) | 1117 |
| Bst2UI | CCWGG | 2 cut(s) | 722, 1319 |
| Bst4CI | ACNGT | 3 cut(s) | 149, 987, 1091 |
| Bst6I | CTCTTC | 2 cut(s) | 861, 981 |
| BstACI | GRCGYC | 5 cut(s) | 78, 137, 269, 420, 793 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 368, 1469 |
| BstBAI | YACGTR | 1 cut(s) | 1370 |
| BstDEI | CTNAG | 4 cut(s) | 812, 1155, 1269, 1595 |
| BstDSI | CCRYGG | 3 cut(s) | 82, 279, 1413 |
| BstEII | GGTNACC | 1 cut(s) | 670 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 330 |
| BstF5I | GGATG | 4 cut(s) | 353, 483, 511, 1699 |
| BstFNI | CGCG | 6 cut(s) | 238, 412, 425, 450, 497, 1215 |
| BstH2I | RGCGCY | 6 cut(s) | 179, 272, 318, 407, 863, 874 |
| BstKTI | GATC | 5 cut(s) | 114, 739, 834, 1116, 1523 |
| BstMBI | GATC | 5 cut(s) | 111, 736, 831, 1113, 1520 |
| BstNI | CCWGG | 2 cut(s) | 722, 1319 |
| BstNSI | RCATGY | 2 cut(s) | 43, 770 |
| BstPI | GGTNACC | 1 cut(s) | 670 |
| BstSCI | CCNGG | 3 cut(s) | 720, 732, 1317 |
| BstSFI | CTRYAG | 5 cut(s) | 330, 477, 505, 533, 1149 |
| BstSLI | GKGCMC | 4 cut(s) | 1301, 1465, 1474, 1689 |
| BstUI | CGCG | 6 cut(s) | 238, 412, 425, 450, 497, 1215 |
| BstX2I | RGATCY | 1 cut(s) | 736 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1406 |
| BstYI | RGATCY | 1 cut(s) | 736 |
| Bsu15I | ATCGAT | 1 cut(s) | 1513 |
| BsuI | GTATCC | 2 cut(s) | 1339, 1400 |
| BsuRI | GGCC | 4 cut(s) | 278, 392, 1198, 1299 |
| BsuTUI | ATCGAT | 1 cut(s) | 1513 |
| BtgI | CCRYGG | 3 cut(s) | 82, 279, 1413 |
| BtsCI | GGATG | 4 cut(s) | 353, 483, 511, 1699 |
| BtsI | GCAGTG | 2 cut(s) | 430, 1101 |
| BtsIMutI | CAGTG | 2 cut(s) | 430, 1101 |
| BveI | ACCTGC | 4 cut(s) | 376, 484, 512, 540 |
| CciI | TCATGA | 1 cut(s) | 1219 |
| Cfr10I | RCCGGY | 1 cut(s) | 388 |
| Cfr13I | GGNCC | 4 cut(s) | 1197, 1297, 1298, 1591 |
| ClaI | ATCGAT | 1 cut(s) | 1513 |
| CseI | GACGC | 4 cut(s) | 67, 126, 428, 801 |
| Csp6I | GTAC | 3 cut(s) | 1092, 1264, 1612 |
| CviQI | GTAC | 3 cut(s) | 1092, 1264, 1612 |
| DdeI | CTNAG | 4 cut(s) | 812, 1155, 1269, 1595 |
| DinI | GGCGCC | 1 cut(s) | 270 |
| DpnI | GATC | 5 cut(s) | 113, 738, 833, 1115, 1522 |
| DpnII | GATC | 5 cut(s) | 111, 736, 831, 1113, 1520 |
| DraIII | CACNNNGTG | 2 cut(s) | 1355, 1469 |
| DriI | GACNNNNNGTC | 2 cut(s) | 946, 1013 |
| EaeI | YGGCCR | 1 cut(s) | 276 |
| Eam1104I | CTCTTC | 2 cut(s) | 861, 981 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 946, 1013 |
| EarI | CTCTTC | 2 cut(s) | 861, 981 |
| EciI | GGCGGA | 1 cut(s) | 238 |
| Ecl136II | GAGCTC | 1 cut(s) | 192 |
| Eco130I | CCWWGG | 2 cut(s) | 1413, 1442 |
| Eco24I | GRGCYC | 4 cut(s) | 166, 194, 306, 1301 |
| Eco47I | GGWCC | 1 cut(s) | 1591 |
| Eco47III | AGCGCT | 3 cut(s) | 316, 861, 872 |
| Eco53kI | GAGCTC | 1 cut(s) | 192 |
| Eco57I | CTGAAG | 3 cut(s) | 623, 1116, 1695 |
| Eco72I | CACGTG | 1 cut(s) | 1370 |
| Eco88I | CYCGRG | 5 cut(s) | 165, 193, 242, 263, 305 |
| Eco91I | GGTNACC | 1 cut(s) | 670 |
| EcoICRI | GAGCTC | 1 cut(s) | 192 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 330 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1591 |
| EcoO65I | GGTNACC | 1 cut(s) | 670 |
| EcoRII | CCWGG | 2 cut(s) | 720, 1317 |
| EcoT14I | CCWWGG | 2 cut(s) | 1413, 1442 |
| EcoT38I | GRGCYC | 4 cut(s) | 166, 194, 306, 1301 |
| EgeI | GGCGCC | 1 cut(s) | 270 |
| EheI | GGCGCC | 1 cut(s) | 270 |
| ErhI | CCWWGG | 2 cut(s) | 1413, 1442 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1599, 1631 |
| FaqI | GGGAC | 6 cut(s) | 116, 273, 566, 1293, 1302, 1604 |
| FauI | CCCGC | 5 cut(s) | 417, 455, 564, 601, 1461 |
| FauNDI | CATATG | 1 cut(s) | 798 |
| FokI | GGATG | 4 cut(s) | 360, 470, 498, 1706 |
| FriOI | GRGCYC | 4 cut(s) | 166, 194, 306, 1301 |
| FspBI | CTAG | 5 cut(s) | 618, 863, 1395, 1443, 1565 |
| GsaI | CCCAGC | 7 cut(s) | 175, 380, 388, 404, 467, 491, 519 |
| HaeII | RGCGCY | 6 cut(s) | 179, 272, 318, 407, 863, 874 |
| HaeIII | GGCC | 4 cut(s) | 278, 392, 1198, 1299 |
| HapII | CCGG | 2 cut(s) | 389, 734 |
| HgaI | GACGC | 4 cut(s) | 67, 126, 428, 801 |
| Hin1I | GRCGYC | 5 cut(s) | 78, 137, 269, 420, 793 |
| HinfI | GANTC | 3 cut(s) | 261, 641, 890 |
| HpaII | CCGG | 2 cut(s) | 389, 734 |
| HphI | GGTGA | 2 cut(s) | 259, 1645 |
| Hpy166II | GTNNAC | 5 cut(s) | 1007, 1463, 1472, 1612, 1687 |
| Hpy188I | TCNGA | 3 cut(s) | 655, 815, 970 |
| Hpy188III | TCNNGA | 7 cut(s) | 7, 296, 784, 835, 1117, 1177, 1220 |
| Hpy8I | GTNNAC | 5 cut(s) | 1007, 1463, 1472, 1612, 1687 |
| Hpy99I | CGWCG | 2 cut(s) | 149, 795 |
| HpyAV | CCTTC | 8 cut(s) | 226, 293, 336, 338, 904, 1063, 1242, 1316 |
| HpyCH4III | ACNGT | 3 cut(s) | 149, 987, 1091 |
| HpyCH4IV | ACGT | 5 cut(s) | 579, 1291, 1369, 1459, 1468 |
| HpyF3I | CTNAG | 4 cut(s) | 812, 1155, 1269, 1595 |
| HpySE526I | ACGT | 5 cut(s) | 579, 1291, 1369, 1459, 1468 |
| Hsp92I | GRCGYC | 5 cut(s) | 78, 137, 269, 420, 793 |
| KasI | GGCGCC | 1 cut(s) | 268 |
| KpnI | GGTACC | 1 cut(s) | 1267 |
| KroI | GCCGGC | 1 cut(s) | 388 |
| KroNI | GCCGGC | 1 cut(s) | 390 |
| Kzo9I | GATC | 5 cut(s) | 111, 736, 831, 1113, 1520 |
| LguI | GCTCTTC | 2 cut(s) | 861, 981 |
| LmnI | GCTCC | 3 cut(s) | 189, 225, 1258 |
| LweI | GCATC | 2 cut(s) | 777, 1684 |
| MaeI | CTAG | 5 cut(s) | 618, 863, 1395, 1443, 1565 |
| MaeII | ACGT | 5 cut(s) | 579, 1291, 1369, 1459, 1468 |
| MaeIII | GTNAC | 3 cut(s) | 670, 1015, 1099 |
| MalI | GATC | 5 cut(s) | 113, 738, 833, 1115, 1522 |
| MbiI | CCGCTC | 1 cut(s) | 1261 |
| MboI | GATC | 5 cut(s) | 111, 736, 831, 1113, 1520 |
| MboII | GAAGA | 8 cut(s) | 26, 878, 968, 1634, 1637, 1640, 1643, 1688 |
| MflI | RGATCY | 1 cut(s) | 736 |
| MhlI | GDGCHC | 7 cut(s) | 166, 194, 306, 1301, 1465, 1474, 1689 |
| MluCI | AATT | 9 cut(s) | 67, 705, 964, 1032, 1183, 1189, 1228, 1478, 1524 |
| Mly113I | GGCGCC | 1 cut(s) | 269 |
| MlyI | GAGTC | 2 cut(s) | 255, 635 |
| MroNI | GCCGGC | 1 cut(s) | 388 |
| MroXI | GAANNNNTTC | 1 cut(s) | 975 |
| MseI | TTAA | 2 cut(s) | 1481, 1527 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1175, 1404, 1515, 1692 |
| MspA1I | CMGCKG | 4 cut(s) | 118, 274, 519, 559 |
| MspI | CCGG | 2 cut(s) | 389, 734 |
| MspR9I | CCNGG | 3 cut(s) | 722, 734, 1319 |
| Mva1269I | GAATGC | 1 cut(s) | 844 |
| MvaI | CCWGG | 2 cut(s) | 722, 1319 |
| MvnI | CGCG | 6 cut(s) | 238, 412, 425, 450, 497, 1215 |
| NaeI | GCCGGC | 1 cut(s) | 390 |
| NarI | GGCGCC | 1 cut(s) | 269 |
| NciI | CCSGG | 1 cut(s) | 734 |
| NcoI | CCATGG | 1 cut(s) | 1413 |
| NdeI | CATATG | 1 cut(s) | 798 |
| NdeII | GATC | 5 cut(s) | 111, 736, 831, 1113, 1520 |
| NgoMIV | GCCGGC | 1 cut(s) | 388 |
| NlaIV | GGNNCC | 7 cut(s) | 270, 726, 1265, 1299, 1411, 1432, 1592 |
| NmeAIII | GCCGAG | 1 cut(s) | 564 |
| NmuCI | GTSAC | 2 cut(s) | 1015, 1099 |
| NspI | RCATGY | 2 cut(s) | 43, 770 |
| PaeI | GCATGC | 1 cut(s) | 770 |
| PaeR7I | CTCGAG | 1 cut(s) | 305 |
| PagI | TCATGA | 1 cut(s) | 1219 |
| PciSI | GCTCTTC | 2 cut(s) | 861, 981 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1456, 1465 |
| PctI | GAATGC | 1 cut(s) | 844 |
| PdiI | GCCGGC | 1 cut(s) | 390 |
| PdmI | GAANNNNTTC | 1 cut(s) | 975 |
| PfeI | GAWTC | 1 cut(s) | 890 |
| PleI | GAGTC | 2 cut(s) | 255, 635 |
| PluTI | GGCGCC | 1 cut(s) | 272 |
| PmaCI | CACGTG | 1 cut(s) | 1370 |
| PmlI | CACGTG | 1 cut(s) | 1370 |
| PpsI | GAGTC | 2 cut(s) | 255, 635 |
| Ppu21I | YACGTR | 1 cut(s) | 1370 |
| PpuMI | RGGWCCY | 1 cut(s) | 1591 |
| PsiI | TTATAA | 2 cut(s) | 1188, 1233 |
| Psp124BI | GAGCTC | 1 cut(s) | 194 |
| Psp5II | RGGWCCY | 1 cut(s) | 1591 |
| Psp6I | CCWGG | 2 cut(s) | 720, 1317 |
| PspCI | CACGTG | 1 cut(s) | 1370 |
| PspEI | GGTNACC | 1 cut(s) | 670 |
| PspFI | CCCAGC | 7 cut(s) | 171, 376, 384, 400, 463, 487, 515 |
| PspGI | CCWGG | 2 cut(s) | 720, 1317 |
| PspN4I | GGNNCC | 7 cut(s) | 270, 726, 1265, 1299, 1411, 1432, 1592 |
| PspOMI | GGGCCC | 1 cut(s) | 1297 |
| PspPI | GGNCC | 4 cut(s) | 1197, 1297, 1298, 1591 |
| PspPPI | RGGWCCY | 1 cut(s) | 1591 |
| PspXI | VCTCGAGB | 1 cut(s) | 305 |
| PstI | CTGCAG | 4 cut(s) | 334, 481, 509, 537 |
| PsuI | RGATCY | 1 cut(s) | 736 |
| PvuII | CAGCTG | 2 cut(s) | 118, 519 |
| RsaI | GTAC | 3 cut(s) | 1093, 1265, 1613 |
| RsaNI | GTAC | 3 cut(s) | 1092, 1264, 1612 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1175, 1404, 1515, 1692 |
| SacI | GAGCTC | 1 cut(s) | 194 |
| SapI | GCTCTTC | 2 cut(s) | 861, 981 |
| SaqAI | TTAA | 2 cut(s) | 1481, 1527 |
| Sau3AI | GATC | 5 cut(s) | 111, 736, 831, 1113, 1520 |
| Sau96I | GGNCC | 4 cut(s) | 1197, 1297, 1298, 1591 |
| SchI | GAGTC | 2 cut(s) | 255, 635 |
| ScrFI | CCNGG | 3 cut(s) | 722, 734, 1319 |
| SduI | GDGCHC | 7 cut(s) | 166, 194, 306, 1301, 1465, 1474, 1689 |
| SfaNI | GCATC | 2 cut(s) | 777, 1684 |
| SfcI | CTRYAG | 5 cut(s) | 330, 477, 505, 533, 1149 |
| SfoI | GGCGCC | 1 cut(s) | 270 |
| Sfr274I | CTCGAG | 1 cut(s) | 305 |
| SinI | GGWCC | 1 cut(s) | 1591 |
| SlaI | CTCGAG | 1 cut(s) | 305 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1175, 1404, 1515, 1692 |
| SmlI | CTYRAG | 2 cut(s) | 305, 771 |
| SmoI | CTYRAG | 2 cut(s) | 305, 771 |
| SphI | GCATGC | 1 cut(s) | 770 |
| Sse9I | AATT | 9 cut(s) | 67, 705, 964, 1032, 1183, 1189, 1228, 1478, 1524 |
| SspDI | GGCGCC | 1 cut(s) | 268 |
| SspMI | CTAG | 5 cut(s) | 618, 863, 1395, 1443, 1565 |
| SstI | GAGCTC | 1 cut(s) | 194 |
| StyD4I | CCNGG | 3 cut(s) | 720, 732, 1317 |
| StyI | CCWWGG | 2 cut(s) | 1413, 1442 |
| TaaI | ACNGT | 3 cut(s) | 149, 987, 1091 |
| TaiI | ACGT | 5 cut(s) | 582, 1294, 1372, 1462, 1471 |
| TaqI | TCGA | 5 cut(s) | 202, 306, 608, 830, 1513 |
| TasI | AATT | 9 cut(s) | 67, 705, 964, 1032, 1183, 1189, 1228, 1478, 1524 |
| TauI | GCSGC | 5 cut(s) | 124, 241, 274, 425, 497 |
| TfiI | GAWTC | 1 cut(s) | 890 |
| Tru1I | TTAA | 2 cut(s) | 1481, 1527 |
| Tru9I | TTAA | 2 cut(s) | 1481, 1527 |
| TscAI | CASTG | 2 cut(s) | 437, 1108 |
| TseFI | GTSAC | 2 cut(s) | 1015, 1099 |
| Tsp45I | GTSAC | 2 cut(s) | 1015, 1099 |
| TspDTI | ATGAA | 5 cut(s) | 120, 627, 1115, 1208, 1695 |
| TspGWI | ACGGA | 2 cut(s) | 71, 1126 |
| TspRI | CASTG | 2 cut(s) | 437, 1108 |
| VneI | GTGCAC | 3 cut(s) | 1461, 1470, 1685 |
| VpaK11BI | GGWCC | 1 cut(s) | 1591 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 330 |
| XapI | RAATTY | 1 cut(s) | 705 |
| XceI | RCATGY | 2 cut(s) | 43, 770 |
| XhoI | CTCGAG | 1 cut(s) | 305 |
| XmaJI | CCTAGG | 1 cut(s) | 1442 |
| XmnI | GAANNNNTTC | 1 cut(s) | 975 |
| XspI | CTAG | 5 cut(s) | 618, 863, 1395, 1443, 1565 |