gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AjiI | CACGTC | 1 cut(s) | 136 |
| AluBI | AGCT | 4 cut(s) | 48, 151, 155, 161 |
| AluI | AGCT | 4 cut(s) | 48, 151, 155, 161 |
| Alw26I | GTCTC | 1 cut(s) | 292 |
| AoxI | GGCC | 1 cut(s) | 93 |
| ApeKI | GCWGC | 1 cut(s) | 179 |
| AsuNHI | GCTAGC | 1 cut(s) | 151 |
| BauI | CACGAG | 1 cut(s) | 119 |
| BbsI | GAAGAC | 1 cut(s) | 273 |
| BbvI | GCAGC | 1 cut(s) | 191 |
| BccI | CCATC | 2 cut(s) | 92, 215 |
| BcoDI | GTCTC | 1 cut(s) | 292 |
| BfaI | CTAG | 5 cut(s) | 45, 107, 126, 152, 293 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 188 |
| BisI | GCNGC | 1 cut(s) | 180 |
| BlsI | GCNGC | 1 cut(s) | 181 |
| BmgBI | CACGTC | 1 cut(s) | 136 |
| BmtI | GCTAGC | 1 cut(s) | 155 |
| BpiI | GAAGAC | 1 cut(s) | 273 |
| BpmI | CTGGAG | 1 cut(s) | 227 |
| BpuEI | CTTGAG | 2 cut(s) | 74, 141 |
| BsaI | GGTCTC | 1 cut(s) | 292 |
| Bse1I | ACTGG | 2 cut(s) | 24, 244 |
| BseGI | GGATG | 1 cut(s) | 210 |
| BseNI | ACTGG | 2 cut(s) | 24, 244 |
| BseXI | GCAGC | 1 cut(s) | 191 |
| BshFI | GGCC | 1 cut(s) | 95 |
| BsmAI | GTCTC | 1 cut(s) | 292 |
| BsnI | GGCC | 1 cut(s) | 95 |
| Bso31I | GGTCTC | 1 cut(s) | 292 |
| BspANI | GGCC | 1 cut(s) | 95 |
| BspHI | TCATGA | 1 cut(s) | 70 |
| BspOI | GCTAGC | 1 cut(s) | 155 |
| BspTNI | GGTCTC | 1 cut(s) | 292 |
| BsrI | ACTGG | 2 cut(s) | 24, 244 |
| BssSI | CACGAG | 1 cut(s) | 119 |
| Bst2BI | CACGAG | 1 cut(s) | 119 |
| Bst4CI | ACNGT | 1 cut(s) | 145 |
| BstC8I | GCNNGC | 1 cut(s) | 153 |
| BstDEI | CTNAG | 1 cut(s) | 184 |
| BstF5I | GGATG | 1 cut(s) | 210 |
| BstMAI | GTCTC | 1 cut(s) | 292 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 167, 176, 188, 197 |
| BstV1I | GCAGC | 1 cut(s) | 191 |
| BstV2I | GAAGAC | 1 cut(s) | 273 |
| BsuRI | GGCC | 1 cut(s) | 95 |
| BtrI | CACGTC | 1 cut(s) | 136 |
| BtsCI | GGATG | 1 cut(s) | 210 |
| Cac8I | GCNNGC | 1 cut(s) | 153 |
| CciI | TCATGA | 1 cut(s) | 70 |
| CviAII | CATG | 1 cut(s) | 71 |
| CviJI | RGCY | 9 cut(s) | 48, 95, 124, 129, 151, 155, 161, 182, 206 |
| CviKI_1 | RGCY | 9 cut(s) | 48, 95, 124, 129, 151, 155, 161, 182, 206 |
| DdeI | CTNAG | 1 cut(s) | 184 |
| Eco31I | GGTCTC | 1 cut(s) | 292 |
| Eco32I | GATATC | 1 cut(s) | 56 |
| EcoRV | GATATC | 1 cut(s) | 56 |
| FaeI | CATG | 1 cut(s) | 74 |
| FaiI | YATR | 5 cut(s) | 72, 228, 249, 255, 257 |
| FatI | CATG | 1 cut(s) | 70 |
| Fnu4HI | GCNGC | 1 cut(s) | 180 |
| FokI | GGATG | 1 cut(s) | 197 |
| Fsp4HI | GCNGC | 1 cut(s) | 180 |
| FspBI | CTAG | 5 cut(s) | 45, 107, 126, 152, 293 |
| GluI | GCNGC | 1 cut(s) | 180 |
| GsuI | CTGGAG | 1 cut(s) | 227 |
| HaeIII | GGCC | 1 cut(s) | 95 |
| Hin1II | CATG | 1 cut(s) | 74 |
| HindIII | AAGCTT | 1 cut(s) | 159 |
| HinfI | GANTC | 4 cut(s) | 102, 115, 220, 236 |
| Hpy188III | TCNNGA | 3 cut(s) | 51, 71, 119 |
| HpyAV | CCTTC | 1 cut(s) | 270 |
| HpyCH4III | ACNGT | 1 cut(s) | 145 |
| HpyCH4IV | ACGT | 1 cut(s) | 135 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 167, 176, 188, 197 |
| HpyF3I | CTNAG | 1 cut(s) | 184 |
| HpySE526I | ACGT | 1 cut(s) | 135 |
| Hsp92II | CATG | 1 cut(s) | 74 |
| LmnI | GCTCC | 1 cut(s) | 34 |
| LpnPI | CCDG | 5 cut(s) | 5, 23, 36, 257, 286 |
| Lsp1109I | GCAGC | 1 cut(s) | 191 |
| MaeI | CTAG | 5 cut(s) | 45, 107, 126, 152, 293 |
| MaeII | ACGT | 1 cut(s) | 135 |
| MaeIII | GTNAC | 1 cut(s) | 5 |
| MboII | GAAGA | 2 cut(s) | 275, 278 |
| MlyI | GAGTC | 1 cut(s) | 214 |
| MnlI | CCTC | 1 cut(s) | 181 |
| MslI | CAYNNNNRTG | 2 cut(s) | 215, 231 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 167, 176, 188, 197 |
| NheI | GCTAGC | 1 cut(s) | 151 |
| NlaIII | CATG | 1 cut(s) | 74 |
| PagI | TCATGA | 1 cut(s) | 70 |
| PfeI | GAWTC | 3 cut(s) | 102, 115, 236 |
| PkrI | GCNGC | 1 cut(s) | 181 |
| PleI | GAGTC | 1 cut(s) | 214 |
| PpsI | GAGTC | 1 cut(s) | 214 |
| RseI | CAYNNNNRTG | 2 cut(s) | 215, 231 |
| SatI | GCNGC | 1 cut(s) | 180 |
| SchI | GAGTC | 1 cut(s) | 214 |
| SetI | ASST | 7 cut(s) | 12, 50, 138, 153, 157, 163, 281 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 215, 231 |
| SmlI | CTYRAG | 2 cut(s) | 89, 156 |
| SmoI | CTYRAG | 2 cut(s) | 89, 156 |
| SspMI | CTAG | 5 cut(s) | 45, 107, 126, 152, 293 |
| TaaI | ACNGT | 1 cut(s) | 145 |
| TaiI | ACGT | 1 cut(s) | 138 |
| TfiI | GAWTC | 3 cut(s) | 102, 115, 236 |
| TseI | GCWGC | 1 cut(s) | 179 |
| TspDTI | ATGAA | 3 cut(s) | 59, 272, 276 |
| XspI | CTAG | 5 cut(s) | 45, 107, 126, 152, 293 |