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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 525 |
| AccB1I | GGYRCC | 2 cut(s) | 1430, 1511 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 296 |
| AccI | GTMKAC | 1 cut(s) | 1628 |
| AccIII | TCCGGA | 1 cut(s) | 657 |
| AciI | CCGC | 8 cut(s) | 102, 195, 374, 1021, 1276, 1434, 1842, 1853 |
| AclI | AACGTT | 1 cut(s) | 972 |
| AclWI | GGATC | 4 cut(s) | 352, 558, 571, 769 |
| AcoI | YGGCCR | 2 cut(s) | 234, 1342 |
| AcsI | RAATTY | 2 cut(s) | 80, 1088 |
| AcuI | CTGAAG | 2 cut(s) | 107, 515 |
| AcyI | GRCGYC | 3 cut(s) | 522, 1482, 1512 |
| AfaI | GTAC | 6 cut(s) | 460, 908, 1099, 1680, 1691, 1722 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 191, 212, 239, 296, 657, 1456, 1460 |
| AgsI | TTSAA | 5 cut(s) | 396, 1036, 1268, 1393, 1548 |
| AjiI | CACGTC | 4 cut(s) | 535, 546, 604, 796 |
| AjnI | CCWGG | 5 cut(s) | 328, 631, 765, 789, 1516 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 948, 980 |
| Alw21I | GWGCWC | 1 cut(s) | 1224 |
| Alw26I | GTCTC | 7 cut(s) | 100, 484, 1022, 1156, 1609, 1784, 1864 |
| AlwI | GGATC | 4 cut(s) | 352, 558, 571, 769 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 276, 296, 493 |
| Ama87I | CYCGRG | 1 cut(s) | 779 |
| Aor13HI | TCCGGA | 1 cut(s) | 657 |
| AoxI | GGCC | 5 cut(s) | 118, 214, 234, 256, 1342 |
| ApeKI | GCWGC | 6 cut(s) | 200, 276, 348, 464, 839, 1732 |
| ApoI | RAATTY | 2 cut(s) | 80, 1088 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1065 |
| AspA2I | CCTAGG | 1 cut(s) | 1454 |
| AspLEI | GCGC | 3 cut(s) | 200, 1399, 1514 |
| AspS9I | GGNCC | 5 cut(s) | 16, 118, 257, 451, 1754 |
| AsuHPI | GGTGA | 7 cut(s) | 46, 77, 164, 1015, 1517, 1525, 1532 |
| AvaI | CYCGRG | 1 cut(s) | 779 |
| AvaII | GGWCC | 3 cut(s) | 16, 451, 1754 |
| AvrII | CCTAGG | 1 cut(s) | 1454 |
| BalI | TGGCCA | 1 cut(s) | 1344 |
| BamHI | GGATCC | 1 cut(s) | 563 |
| BanI | GGYRCC | 2 cut(s) | 1430, 1511 |
| BanII | GRGCYC | 3 cut(s) | 419, 950, 1224 |
| BbsI | GAAGAC | 3 cut(s) | 933, 1136, 1869 |
| Bbv12I | GWGCWC | 1 cut(s) | 1224 |
| BbvCI | CCTCAGC | 1 cut(s) | 481 |
| BbvI | GCAGC | 6 cut(s) | 187, 263, 360, 451, 851, 1719 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1175, 1209 |
| BciT130I | CCWGG | 5 cut(s) | 330, 633, 767, 791, 1518 |
| BciVI | GTATCC | 1 cut(s) | 763 |
| BclI | TGATCA | 1 cut(s) | 1203 |
| BcoDI | GTCTC | 7 cut(s) | 100, 484, 1022, 1156, 1609, 1784, 1864 |
| BfaI | CTAG | 7 cut(s) | 128, 501, 786, 998, 1455, 1668, 1845 |
| BfmI | CTRYAG | 1 cut(s) | 1194 |
| BfoI | RGCGCY | 3 cut(s) | 201, 1400, 1515 |
| BfuI | GTATCC | 1 cut(s) | 763 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 848 |
| BisI | GCNGC | 7 cut(s) | 196, 201, 277, 349, 465, 840, 1733 |
| BlnI | CCTAGG | 1 cut(s) | 1454 |
| BlsI | GCNGC | 7 cut(s) | 197, 202, 278, 350, 466, 841, 1734 |
| Bme1390I | CCNGG | 5 cut(s) | 330, 633, 767, 791, 1518 |
| Bme18I | GGWCC | 3 cut(s) | 16, 451, 1754 |
| BmeT110I | CYCGRG | 1 cut(s) | 779 |
| BmgBI | CACGTC | 4 cut(s) | 535, 546, 604, 796 |
| BmgT120I | GGNCC | 5 cut(s) | 16, 118, 257, 451, 1754 |
| BmrFI | CCNGG | 5 cut(s) | 330, 633, 767, 791, 1518 |
| BmrI | ACTGGG | 2 cut(s) | 22, 1684 |
| BmsI | GCATC | 7 cut(s) | 288, 537, 560, 618, 754, 1102, 1513 |
| BmuI | ACTGGG | 2 cut(s) | 22, 1684 |
| BpiI | GAAGAC | 3 cut(s) | 933, 1136, 1869 |
| BpmI | CTGGAG | 2 cut(s) | 161, 887 |
| Bpu10I | CCTNAGC | 1 cut(s) | 481 |
| BpuEI | CTTGAG | 2 cut(s) | 734, 801 |
| Bsa29I | ATCGAT | 1 cut(s) | 1185 |
| BsaHI | GRCGYC | 3 cut(s) | 522, 1482, 1512 |
| BsaI | GGTCTC | 1 cut(s) | 100 |
| BsaJI | CCNNGG | 4 cut(s) | 631, 1454, 1485, 1516 |
| BsaWI | WCCGGW | 2 cut(s) | 303, 657 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 612, 642 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 191, 212, 239, 296, 657, 1456, 1460 |
| Bse118I | RCCGGY | 7 cut(s) | 56, 191, 232, 254, 344, 376, 642 |
| Bse1I | ACTGG | 8 cut(s) | 17, 217, 323, 567, 589, 709, 904, 1679 |
| BseAI | TCCGGA | 1 cut(s) | 657 |
| BseBI | CCWGG | 5 cut(s) | 330, 633, 767, 791, 1518 |
| BseCI | ATCGAT | 1 cut(s) | 1185 |
| BseDI | CCNNGG | 4 cut(s) | 631, 1454, 1485, 1516 |
| BseGI | GGATG | 9 cut(s) | 336, 528, 551, 666, 870, 898, 1260, 1495, 1861 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 191, 212, 239, 296, 657, 1456, 1460 |
| BseMII | CTCAG | 2 cut(s) | 495, 1791 |
| BseNI | ACTGG | 8 cut(s) | 17, 217, 323, 567, 589, 709, 904, 1679 |
| BseXI | GCAGC | 6 cut(s) | 187, 263, 360, 451, 851, 1719 |
| BsgI | GTGCAG | 2 cut(s) | 347, 450 |
| BshFI | GGCC | 5 cut(s) | 120, 216, 236, 258, 1344 |
| BshNI | GGYRCC | 2 cut(s) | 1430, 1511 |
| BshVI | ATCGAT | 1 cut(s) | 1185 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1224 |
| BsiHKCI | CYCGRG | 1 cut(s) | 779 |
| BslFI | GGGAC | 2 cut(s) | 271, 1454 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 191, 212, 239, 296, 657, 1456, 1460 |
| BsmAI | GTCTC | 7 cut(s) | 100, 484, 1022, 1156, 1609, 1784, 1864 |
| BsmBI | CGTCTC | 1 cut(s) | 1156 |
| BsmFI | GGGAC | 2 cut(s) | 271, 1454 |
| BsnI | GGCC | 5 cut(s) | 120, 216, 236, 258, 1344 |
| Bso31I | GGTCTC | 1 cut(s) | 100 |
| BsoBI | CYCGRG | 1 cut(s) | 779 |
| Bsp1286I | GDGCHC | 3 cut(s) | 419, 950, 1224 |
| Bsp13I | TCCGGA | 1 cut(s) | 657 |
| Bsp143I | GATC | 6 cut(s) | 357, 563, 774, 1104, 1203, 1831 |
| Bsp19I | CCATGG | 1 cut(s) | 1485 |
| BspACI | CCGC | 8 cut(s) | 102, 195, 374, 1021, 1276, 1434, 1842, 1853 |
| BspANI | GGCC | 5 cut(s) | 120, 216, 236, 258, 1344 |
| BspCNI | CTCAG | 2 cut(s) | 494, 1790 |
| BspDI | ATCGAT | 1 cut(s) | 1185 |
| BspEI | TCCGGA | 1 cut(s) | 657 |
| BspHI | TCATGA | 1 cut(s) | 1216 |
| BspMAI | CTGCAG | 1 cut(s) | 1198 |
| BspPI | GGATC | 4 cut(s) | 352, 558, 571, 769 |
| BspT107I | GGYRCC | 2 cut(s) | 1430, 1511 |
| BspTNI | GGTCTC | 1 cut(s) | 100 |
| BsrFI | RCCGGY | 7 cut(s) | 56, 191, 232, 254, 344, 376, 642 |
| BsrI | ACTGG | 8 cut(s) | 17, 217, 323, 567, 589, 709, 904, 1679 |
| BssAI | RCCGGY | 7 cut(s) | 56, 191, 232, 254, 344, 376, 642 |
| BssECI | CCNNGG | 4 cut(s) | 631, 1454, 1485, 1516 |
| BssMI | GATC | 6 cut(s) | 357, 563, 774, 1104, 1203, 1831 |
| BssNI | GRCGYC | 3 cut(s) | 522, 1482, 1512 |
| BssT1I | CCWWGG | 2 cut(s) | 1454, 1485 |
| Bst2UI | CCWGG | 5 cut(s) | 330, 633, 767, 791, 1518 |
| Bst4CI | ACNGT | 4 cut(s) | 65, 580, 805, 1875 |
| Bst6I | CTCTTC | 1 cut(s) | 1297 |
| BstACI | GRCGYC | 3 cut(s) | 522, 1482, 1512 |
| BstC8I | GCNNGC | 6 cut(s) | 378, 598, 626, 743, 813, 1462 |
| BstDEI | CTNAG | 5 cut(s) | 481, 844, 1170, 1368, 1777 |
| BstDSI | CCRYGG | 1 cut(s) | 1485 |
| BstEII | GGTNACC | 2 cut(s) | 52, 1271 |
| BstF5I | GGATG | 9 cut(s) | 336, 528, 551, 666, 870, 898, 1260, 1495, 1861 |
| BstH2I | RGCGCY | 3 cut(s) | 201, 1400, 1515 |
| BstHHI | GCGC | 3 cut(s) | 200, 1399, 1514 |
| BstKTI | GATC | 6 cut(s) | 360, 566, 777, 1107, 1206, 1834 |
| BstMAI | GTCTC | 7 cut(s) | 100, 484, 1022, 1156, 1609, 1784, 1864 |
| BstMBI | GATC | 6 cut(s) | 357, 563, 774, 1104, 1203, 1831 |
| BstNI | CCWGG | 5 cut(s) | 330, 633, 767, 791, 1518 |
| BstPI | GGTNACC | 2 cut(s) | 52, 1271 |
| BstSCI | CCNGG | 5 cut(s) | 328, 631, 765, 789, 1516 |
| BstSFI | CTRYAG | 1 cut(s) | 1194 |
| BstV1I | GCAGC | 6 cut(s) | 187, 263, 360, 451, 851, 1719 |
| BstV2I | GAAGAC | 3 cut(s) | 933, 1136, 1869 |
| BstX2I | RGATCY | 2 cut(s) | 357, 563 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1352 |
| BstYI | RGATCY | 2 cut(s) | 357, 563 |
| Bsu15I | ATCGAT | 1 cut(s) | 1185 |
| BsuI | GTATCC | 1 cut(s) | 763 |
| BsuRI | GGCC | 5 cut(s) | 120, 216, 236, 258, 1344 |
| BsuTUI | ATCGAT | 1 cut(s) | 1185 |
| BtgI | CCRYGG | 1 cut(s) | 1485 |
| BtgZI | GCGATG | 1 cut(s) | 1130 |
| BtrI | CACGTC | 4 cut(s) | 535, 546, 604, 796 |
| BtsCI | GGATG | 9 cut(s) | 336, 528, 551, 666, 870, 898, 1260, 1495, 1861 |
| BtsI | GCAGTG | 1 cut(s) | 1636 |
| BtsIMutI | CAGTG | 2 cut(s) | 316, 1636 |
| Cac8I | GCNNGC | 6 cut(s) | 378, 598, 626, 743, 813, 1462 |
| CaiI | CAGNNNCTG | 3 cut(s) | 276, 296, 493 |
| CciI | TCATGA | 1 cut(s) | 1216 |
| CfoI | GCGC | 3 cut(s) | 200, 1399, 1514 |
| Cfr10I | RCCGGY | 7 cut(s) | 56, 191, 232, 254, 344, 376, 642 |
| Cfr13I | GGNCC | 5 cut(s) | 16, 118, 257, 451, 1754 |
| ClaI | ATCGAT | 1 cut(s) | 1185 |
| CseI | GACGC | 4 cut(s) | 574, 1394, 1490, 1571 |
| Csp6I | GTAC | 6 cut(s) | 459, 907, 1098, 1679, 1690, 1721 |
| CviAII | CATG | 8 cut(s) | 430, 1217, 1253, 1478, 1486, 1502, 1568, 1826 |
| CviQI | GTAC | 6 cut(s) | 459, 907, 1098, 1679, 1690, 1721 |
| DdeI | CTNAG | 5 cut(s) | 481, 844, 1170, 1368, 1777 |
| DinI | GGCGCC | 1 cut(s) | 1513 |
| DpnI | GATC | 6 cut(s) | 359, 565, 776, 1106, 1205, 1833 |
| DpnII | GATC | 6 cut(s) | 357, 563, 774, 1104, 1203, 1831 |
| EaeI | YGGCCR | 2 cut(s) | 234, 1342 |
| Eam1104I | CTCTTC | 1 cut(s) | 1297 |
| EarI | CTCTTC | 1 cut(s) | 1297 |
| EciI | GGCGGA | 1 cut(s) | 117 |
| Ecl136II | GAGCTC | 1 cut(s) | 1222 |
| Eco130I | CCWWGG | 2 cut(s) | 1454, 1485 |
| Eco24I | GRGCYC | 3 cut(s) | 419, 950, 1224 |
| Eco31I | GGTCTC | 1 cut(s) | 100 |
| Eco47I | GGWCC | 3 cut(s) | 16, 451, 1754 |
| Eco53kI | GAGCTC | 1 cut(s) | 1222 |
| Eco57I | CTGAAG | 2 cut(s) | 107, 515 |
| Eco88I | CYCGRG | 1 cut(s) | 779 |
| Eco91I | GGTNACC | 2 cut(s) | 52, 1271 |
| EcoICRI | GAGCTC | 1 cut(s) | 1222 |
| EcoO109I | RGGNCCY | 2 cut(s) | 16, 1754 |
| EcoO65I | GGTNACC | 2 cut(s) | 52, 1271 |
| EcoRI | GAATTC | 1 cut(s) | 1088 |
| EcoRII | CCWGG | 5 cut(s) | 328, 631, 765, 789, 1516 |
| EcoT14I | CCWWGG | 2 cut(s) | 1454, 1485 |
| EcoT38I | GRGCYC | 3 cut(s) | 419, 950, 1224 |
| EgeI | GGCGCC | 1 cut(s) | 1513 |
| EheI | GGCGCC | 1 cut(s) | 1513 |
| ErhI | CCWWGG | 2 cut(s) | 1454, 1485 |
| Esp3I | CGTCTC | 1 cut(s) | 1156 |
| FaeI | CATG | 8 cut(s) | 433, 1220, 1256, 1481, 1489, 1505, 1571, 1829 |
| FaqI | GGGAC | 2 cut(s) | 271, 1454 |
| FatI | CATG | 8 cut(s) | 429, 1216, 1252, 1477, 1485, 1501, 1567, 1825 |
| FauNDI | CATATG | 1 cut(s) | 888 |
| FbaI | TGATCA | 1 cut(s) | 1203 |
| FblI | GTMKAC | 1 cut(s) | 1628 |
| Fnu4HI | GCNGC | 7 cut(s) | 196, 201, 277, 349, 465, 840, 1733 |
| FokI | GGATG | 9 cut(s) | 323, 515, 538, 673, 857, 905, 1247, 1502, 1868 |
| FriOI | GRGCYC | 3 cut(s) | 419, 950, 1224 |
| Fsp4HI | GCNGC | 7 cut(s) | 196, 201, 277, 349, 465, 840, 1733 |
| FspBI | CTAG | 7 cut(s) | 128, 501, 786, 998, 1455, 1668, 1845 |
| GlaI | GCGC | 3 cut(s) | 199, 1398, 1513 |
| GluI | GCNGC | 7 cut(s) | 196, 201, 277, 349, 465, 840, 1733 |
| GsuI | CTGGAG | 2 cut(s) | 161, 887 |
| HaeII | RGCGCY | 3 cut(s) | 201, 1400, 1515 |
| HaeIII | GGCC | 5 cut(s) | 120, 216, 236, 258, 1344 |
| HgaI | GACGC | 4 cut(s) | 574, 1394, 1490, 1571 |
| HhaI | GCGC | 3 cut(s) | 200, 1399, 1514 |
| Hin1I | GRCGYC | 3 cut(s) | 522, 1482, 1512 |
| Hin1II | CATG | 8 cut(s) | 433, 1220, 1256, 1481, 1489, 1505, 1571, 1829 |
| Hin6I | GCGC | 3 cut(s) | 198, 1397, 1512 |
| HinP1I | GCGC | 3 cut(s) | 198, 1397, 1512 |
| HincII | GTYRAC | 3 cut(s) | 638, 648, 1310 |
| HindII | GTYRAC | 3 cut(s) | 638, 648, 1310 |
| HindIII | AAGCTT | 1 cut(s) | 819 |
| HinfI | GANTC | 9 cut(s) | 220, 267, 293, 762, 880, 896, 980, 1182, 1792 |
| HphI | GGTGA | 7 cut(s) | 46, 77, 164, 1015, 1517, 1525, 1532 |
| Hpy166II | GTNNAC | 5 cut(s) | 638, 648, 1310, 1444, 1629 |
| Hpy188I | TCNGA | 8 cut(s) | 242, 341, 414, 520, 539, 712, 1060, 1561 |
| Hpy188III | TCNNGA | 7 cut(s) | 178, 658, 731, 977, 992, 1046, 1217 |
| Hpy8I | GTNNAC | 5 cut(s) | 638, 648, 1310, 1444, 1629 |
| Hpy99I | CGWCG | 2 cut(s) | 65, 1887 |
| HpyAV | CCTTC | 4 cut(s) | 131, 930, 1153, 1262 |
| HpyCH4III | ACNGT | 4 cut(s) | 65, 580, 805, 1875 |
| HpyCH4IV | ACGT | 7 cut(s) | 522, 534, 545, 603, 795, 972, 1312 |
| HpyCH4V | TGCA | 9 cut(s) | 22, 72, 158, 279, 364, 467, 1157, 1196, 1825 |
| HpyF3I | CTNAG | 5 cut(s) | 481, 844, 1170, 1368, 1777 |
| HpySE526I | ACGT | 7 cut(s) | 522, 534, 545, 603, 795, 972, 1312 |
| Hsp92I | GRCGYC | 3 cut(s) | 522, 1482, 1512 |
| Hsp92II | CATG | 8 cut(s) | 433, 1220, 1256, 1481, 1489, 1505, 1571, 1829 |
| HspAI | GCGC | 3 cut(s) | 198, 1397, 1512 |
| KasI | GGCGCC | 1 cut(s) | 1511 |
| Kpn2I | TCCGGA | 1 cut(s) | 657 |
| KroI | GCCGGC | 1 cut(s) | 376 |
| KroNI | GCCGGC | 1 cut(s) | 378 |
| Ksp22I | TGATCA | 1 cut(s) | 1203 |
| Kzo9I | GATC | 6 cut(s) | 357, 563, 774, 1104, 1203, 1831 |
| LmnI | GCTCC | 7 cut(s) | 135, 445, 633, 694, 906, 1229, 1361 |
| Lsp1109I | GCAGC | 6 cut(s) | 187, 263, 360, 451, 851, 1719 |
| LweI | GCATC | 7 cut(s) | 288, 537, 560, 618, 754, 1102, 1513 |
| MaeI | CTAG | 7 cut(s) | 128, 501, 786, 998, 1455, 1668, 1845 |
| MaeII | ACGT | 7 cut(s) | 522, 534, 545, 603, 795, 972, 1312 |
| MalI | GATC | 6 cut(s) | 359, 565, 776, 1106, 1205, 1833 |
| MboI | GATC | 6 cut(s) | 357, 563, 774, 1104, 1203, 1831 |
| MboII | GAAGA | 7 cut(s) | 935, 938, 968, 1141, 1314, 1575, 1869 |
| MfeI | CAATTG | 1 cut(s) | 1725 |
| MflI | RGATCY | 2 cut(s) | 357, 563 |
| MhlI | GDGCHC | 3 cut(s) | 419, 950, 1224 |
| MlsI | TGGCCA | 1 cut(s) | 1344 |
| MluCI | AATT | 6 cut(s) | 80, 159, 677, 1088, 1621, 1725 |
| MluNI | TGGCCA | 1 cut(s) | 1344 |
| Mly113I | GGCGCC | 1 cut(s) | 1512 |
| MlyI | GAGTC | 3 cut(s) | 874, 974, 1786 |
| MmeI | TCCRAC | 2 cut(s) | 1762, 1820 |
| Mox20I | TGGCCA | 1 cut(s) | 1344 |
| MroI | TCCGGA | 1 cut(s) | 657 |
| MroNI | GCCGGC | 1 cut(s) | 376 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1065 |
| MscI | TGGCCA | 1 cut(s) | 1344 |
| MseI | TTAA | 4 cut(s) | 510, 1074, 1082, 1814 |
| MslI | CAYNNNNRTG | 8 cut(s) | 875, 891, 1350, 1380, 1503, 1506, 1614, 1865 |
| Msp20I | TGGCCA | 1 cut(s) | 1344 |
| MspA1I | CMGCKG | 1 cut(s) | 464 |
| MspR9I | CCNGG | 5 cut(s) | 330, 633, 767, 791, 1518 |
| MunI | CAATTG | 1 cut(s) | 1725 |
| MvaI | CCWGG | 5 cut(s) | 330, 633, 767, 791, 1518 |
| NaeI | GCCGGC | 1 cut(s) | 378 |
| NarI | GGCGCC | 1 cut(s) | 1512 |
| NcoI | CCATGG | 1 cut(s) | 1485 |
| NdeI | CATATG | 1 cut(s) | 888 |
| NdeII | GATC | 6 cut(s) | 357, 563, 774, 1104, 1203, 1831 |
| NgoMIV | GCCGGC | 1 cut(s) | 376 |
| NlaIII | CATG | 8 cut(s) | 433, 1220, 1256, 1481, 1489, 1505, 1571, 1829 |
| NmeAIII | GCCGAG | 1 cut(s) | 164 |
| NmuCI | GTSAC | 6 cut(s) | 52, 65, 245, 977, 1670, 1858 |
| PaeR7I | CTCGAG | 1 cut(s) | 779 |
| PagI | TCATGA | 1 cut(s) | 1216 |
| PdiI | GCCGGC | 1 cut(s) | 378 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1065 |
| PfeI | GAWTC | 6 cut(s) | 220, 267, 293, 762, 896, 1182 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 296 |
| PfoI | TCCNGGA | 1 cut(s) | 765 |
| PkrI | GCNGC | 7 cut(s) | 197, 202, 278, 350, 466, 841, 1734 |
| PleI | GAGTC | 3 cut(s) | 874, 974, 1786 |
| PluTI | GGCGCC | 1 cut(s) | 1515 |
| PpsI | GAGTC | 3 cut(s) | 874, 974, 1786 |
| PpuMI | RGGWCCY | 2 cut(s) | 16, 1754 |
| Psp124BI | GAGCTC | 1 cut(s) | 1224 |
| Psp1406I | AACGTT | 1 cut(s) | 972 |
| Psp5II | RGGWCCY | 2 cut(s) | 16, 1754 |
| Psp6I | CCWGG | 5 cut(s) | 328, 631, 765, 789, 1516 |
| PspEI | GGTNACC | 2 cut(s) | 52, 1271 |
| PspGI | CCWGG | 5 cut(s) | 328, 631, 765, 789, 1516 |
| PspPI | GGNCC | 5 cut(s) | 16, 118, 257, 451, 1754 |
| PspPPI | RGGWCCY | 2 cut(s) | 16, 1754 |
| PspXI | VCTCGAGB | 1 cut(s) | 779 |
| PstI | CTGCAG | 1 cut(s) | 1198 |
| PstNI | CAGNNNCTG | 3 cut(s) | 276, 296, 493 |
| PsuI | RGATCY | 2 cut(s) | 357, 563 |
| PvuII | CAGCTG | 1 cut(s) | 464 |
| RsaI | GTAC | 6 cut(s) | 460, 908, 1099, 1680, 1691, 1722 |
| RsaNI | GTAC | 6 cut(s) | 459, 907, 1098, 1679, 1690, 1721 |
| RseI | CAYNNNNRTG | 8 cut(s) | 875, 891, 1350, 1380, 1503, 1506, 1614, 1865 |
| SacI | GAGCTC | 1 cut(s) | 1224 |
| SaqAI | TTAA | 4 cut(s) | 510, 1074, 1082, 1814 |
| SatI | GCNGC | 7 cut(s) | 196, 201, 277, 349, 465, 840, 1733 |
| Sau3AI | GATC | 6 cut(s) | 357, 563, 774, 1104, 1203, 1831 |
| Sau96I | GGNCC | 5 cut(s) | 16, 118, 257, 451, 1754 |
| SchI | GAGTC | 3 cut(s) | 874, 974, 1786 |
| ScrFI | CCNGG | 5 cut(s) | 330, 633, 767, 791, 1518 |
| SduI | GDGCHC | 3 cut(s) | 419, 950, 1224 |
| SfaNI | GCATC | 7 cut(s) | 288, 537, 560, 618, 754, 1102, 1513 |
| SfcI | CTRYAG | 1 cut(s) | 1194 |
| SfoI | GGCGCC | 1 cut(s) | 1513 |
| Sfr274I | CTCGAG | 1 cut(s) | 779 |
| SgrAI | CRCCGGYG | 1 cut(s) | 56 |
| SinI | GGWCC | 3 cut(s) | 16, 451, 1754 |
| SlaI | CTCGAG | 1 cut(s) | 779 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 875, 891, 1350, 1380, 1503, 1506, 1614, 1865 |
| SmlI | CTYRAG | 3 cut(s) | 749, 779, 816 |
| SmoI | CTYRAG | 3 cut(s) | 749, 779, 816 |
| Sse9I | AATT | 6 cut(s) | 80, 159, 677, 1088, 1621, 1725 |
| SsiI | CCGC | 8 cut(s) | 102, 195, 374, 1021, 1276, 1434, 1842, 1853 |
| SspDI | GGCGCC | 1 cut(s) | 1511 |
| SspMI | CTAG | 7 cut(s) | 128, 501, 786, 998, 1455, 1668, 1845 |
| SstI | GAGCTC | 1 cut(s) | 1224 |
| StyD4I | CCNGG | 5 cut(s) | 328, 631, 765, 789, 1516 |
| StyI | CCWWGG | 2 cut(s) | 1454, 1485 |
| TaaI | ACNGT | 4 cut(s) | 65, 580, 805, 1875 |
| TaiI | ACGT | 7 cut(s) | 525, 537, 548, 606, 798, 975, 1315 |
| TaqI | TCGA | 7 cut(s) | 223, 756, 780, 954, 1180, 1185, 1416 |
| TasI | AATT | 6 cut(s) | 80, 159, 677, 1088, 1621, 1725 |
| TatI | WGTACW | 1 cut(s) | 458 |
| TauI | GCSGC | 1 cut(s) | 198 |
| TfiI | GAWTC | 6 cut(s) | 220, 267, 293, 762, 896, 1182 |
| Tru1I | TTAA | 4 cut(s) | 510, 1074, 1082, 1814 |
| Tru9I | TTAA | 4 cut(s) | 510, 1074, 1082, 1814 |
| TscAI | CASTG | 2 cut(s) | 323, 1643 |
| TseFI | GTSAC | 6 cut(s) | 52, 65, 245, 977, 1670, 1858 |
| TseI | GCWGC | 6 cut(s) | 200, 276, 348, 464, 839, 1732 |
| Tsp45I | GTSAC | 6 cut(s) | 52, 65, 245, 977, 1670, 1858 |
| TspDTI | ATGAA | 5 cut(s) | 932, 936, 1205, 1250, 1575 |
| TspGWI | ACGGA | 3 cut(s) | 148, 1309, 1429 |
| TspRI | CASTG | 2 cut(s) | 323, 1643 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 296 |
| VpaK11BI | GGWCC | 3 cut(s) | 16, 451, 1754 |
| XapI | RAATTY | 2 cut(s) | 80, 1088 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1457, 1505 |
| XhoI | CTCGAG | 1 cut(s) | 779 |
| XmaJI | CCTAGG | 1 cut(s) | 1454 |
| XmiI | GTMKAC | 1 cut(s) | 1628 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1065 |
| XspI | CTAG | 7 cut(s) | 128, 501, 786, 998, 1455, 1668, 1845 |
| ZraI | GACGTC | 1 cut(s) | 523 |