gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 142 |
| AjiI | CACGTC | 2 cut(s) | 30, 199 |
| AjnI | CCWGG | 2 cut(s) | 168, 192 |
| AluBI | AGCT | 2 cut(s) | 35, 218 |
| AluI | AGCT | 2 cut(s) | 35, 218 |
| Ama87I | CYCGRG | 1 cut(s) | 182 |
| ApeKI | GCWGC | 1 cut(s) | 8 |
| AspS9I | GGNCC | 1 cut(s) | 17 |
| AsuC2I | CCSGG | 1 cut(s) | 13 |
| AvaI | CYCGRG | 1 cut(s) | 182 |
| AvaII | GGWCC | 1 cut(s) | 17 |
| BbvI | GCAGC | 1 cut(s) | 20 |
| BciT130I | CCWGG | 2 cut(s) | 170, 194 |
| BcnI | CCSGG | 1 cut(s) | 13 |
| BfaI | CTAG | 1 cut(s) | 189 |
| BisI | GCNGC | 1 cut(s) | 9 |
| BlsI | GCNGC | 1 cut(s) | 10 |
| Bme1390I | CCNGG | 3 cut(s) | 13, 170, 194 |
| Bme18I | GGWCC | 1 cut(s) | 17 |
| BmeT110I | CYCGRG | 1 cut(s) | 182 |
| BmgBI | CACGTC | 2 cut(s) | 30, 199 |
| BmgT120I | GGNCC | 1 cut(s) | 17 |
| BmiI | GGNNCC | 2 cut(s) | 18, 19 |
| BmrFI | CCNGG | 3 cut(s) | 13, 170, 194 |
| BmsI | GCATC | 1 cut(s) | 157 |
| BpuEI | CTTGAG | 1 cut(s) | 137 |
| BpuMI | CCSGG | 1 cut(s) | 13 |
| BsaJI | CCNNGG | 1 cut(s) | 12 |
| BsaWI | WCCGGW | 1 cut(s) | 60 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 19, 49 |
| Bse1I | ACTGG | 1 cut(s) | 112 |
| BseBI | CCWGG | 2 cut(s) | 170, 194 |
| BseDI | CCNNGG | 1 cut(s) | 12 |
| BseGI | GGATG | 1 cut(s) | 69 |
| BseNI | ACTGG | 1 cut(s) | 112 |
| BseXI | GCAGC | 1 cut(s) | 20 |
| Bsh1285I | CGRYCG | 1 cut(s) | 61 |
| BsiEI | CGRYCG | 1 cut(s) | 61 |
| BsiHKCI | CYCGRG | 1 cut(s) | 182 |
| BsiSI | CCGG | 2 cut(s) | 12, 61 |
| BslFI | GGGAC | 1 cut(s) | 30 |
| BsmFI | GGGAC | 1 cut(s) | 30 |
| BsoBI | CYCGRG | 1 cut(s) | 182 |
| BspACI | CCGC | 1 cut(s) | 142 |
| BspLI | GGNNCC | 2 cut(s) | 18, 19 |
| BsrI | ACTGG | 1 cut(s) | 112 |
| BssECI | CCNNGG | 1 cut(s) | 12 |
| Bst2UI | CCWGG | 2 cut(s) | 170, 194 |
| Bst4CI | ACNGT | 1 cut(s) | 208 |
| BstC8I | GCNNGC | 2 cut(s) | 146, 216 |
| BstF5I | GGATG | 1 cut(s) | 69 |
| BstMCI | CGRYCG | 1 cut(s) | 61 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 32 |
| BstNI | CCWGG | 2 cut(s) | 170, 194 |
| BstSCI | CCNGG | 3 cut(s) | 11, 168, 192 |
| BstV1I | GCAGC | 1 cut(s) | 20 |
| BtrI | CACGTC | 2 cut(s) | 30, 199 |
| BtsCI | GGATG | 1 cut(s) | 69 |
| BtsI | GCAGTG | 1 cut(s) | 21 |
| BtsIMutI | CAGTG | 1 cut(s) | 21 |
| Cac8I | GCNNGC | 2 cut(s) | 146, 216 |
| Cfr13I | GGNCC | 1 cut(s) | 17 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 142, 177 |
| CviJI | RGCY | 7 cut(s) | 11, 35, 111, 158, 187, 192, 218 |
| CviKI_1 | RGCY | 7 cut(s) | 11, 35, 111, 158, 187, 192, 218 |
| EciI | GGCGGA | 1 cut(s) | 131 |
| Eco32I | GATATC | 1 cut(s) | 119 |
| Eco47I | GGWCC | 1 cut(s) | 17 |
| Eco88I | CYCGRG | 1 cut(s) | 182 |
| EcoO109I | RGGNCCY | 1 cut(s) | 17 |
| EcoRII | CCWGG | 2 cut(s) | 168, 192 |
| EcoRV | GATATC | 1 cut(s) | 119 |
| FaiI | YATR | 1 cut(s) | 176 |
| FaqI | GGGAC | 1 cut(s) | 30 |
| Fnu4HI | GCNGC | 1 cut(s) | 9 |
| FokI | GGATG | 1 cut(s) | 76 |
| Fsp4HI | GCNGC | 1 cut(s) | 9 |
| FspBI | CTAG | 1 cut(s) | 189 |
| GluI | GCNGC | 1 cut(s) | 9 |
| HapII | CCGG | 2 cut(s) | 12, 61 |
| HincII | GTYRAC | 2 cut(s) | 45, 55 |
| HindII | GTYRAC | 2 cut(s) | 45, 55 |
| HindIII | AAGCTT | 1 cut(s) | 216 |
| HinfI | GANTC | 2 cut(s) | 165, 178 |
| HpaII | CCGG | 2 cut(s) | 12, 61 |
| Hpy166II | GTNNAC | 2 cut(s) | 45, 55 |
| Hpy188III | TCNNGA | 3 cut(s) | 114, 134, 182 |
| Hpy8I | GTNNAC | 2 cut(s) | 45, 55 |
| HpyCH4III | ACNGT | 1 cut(s) | 208 |
| HpyCH4IV | ACGT | 3 cut(s) | 29, 47, 198 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 32 |
| HpySE526I | ACGT | 3 cut(s) | 29, 47, 198 |
| KflI | GGGWCCC | 1 cut(s) | 17 |
| LmnI | GCTCC | 2 cut(s) | 40, 97 |
| Lsp1109I | GCAGC | 1 cut(s) | 20 |
| LweI | GCATC | 1 cut(s) | 157 |
| MaeI | CTAG | 1 cut(s) | 189 |
| MaeII | ACGT | 3 cut(s) | 29, 47, 198 |
| MaeIII | GTNAC | 1 cut(s) | 68 |
| MluCI | AATT | 1 cut(s) | 80 |
| MseI | TTAA | 1 cut(s) | 220 |
| MspI | CCGG | 2 cut(s) | 12, 61 |
| MspR9I | CCNGG | 3 cut(s) | 13, 170, 194 |
| MvaI | CCWGG | 2 cut(s) | 170, 194 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 32 |
| NciI | CCSGG | 1 cut(s) | 13 |
| NlaIV | GGNNCC | 2 cut(s) | 18, 19 |
| PaeR7I | CTCGAG | 1 cut(s) | 182 |
| PfeI | GAWTC | 2 cut(s) | 165, 178 |
| PfoI | TCCNGGA | 1 cut(s) | 168 |
| PkrI | GCNGC | 1 cut(s) | 10 |
| PpuMI | RGGWCCY | 1 cut(s) | 17 |
| Psp5II | RGGWCCY | 1 cut(s) | 17 |
| Psp6I | CCWGG | 2 cut(s) | 168, 192 |
| PspGI | CCWGG | 2 cut(s) | 168, 192 |
| PspN4I | GGNNCC | 2 cut(s) | 18, 19 |
| PspPI | GGNCC | 1 cut(s) | 17 |
| PspPPI | RGGWCCY | 1 cut(s) | 17 |
| SaqAI | TTAA | 1 cut(s) | 220 |
| SatI | GCNGC | 1 cut(s) | 9 |
| Sau96I | GGNCC | 1 cut(s) | 17 |
| ScrFI | CCNGG | 3 cut(s) | 13, 170, 194 |
| SetI | ASST | 7 cut(s) | 32, 37, 50, 75, 128, 201, 220 |
| SfaNI | GCATC | 1 cut(s) | 157 |
| Sfr274I | CTCGAG | 1 cut(s) | 182 |
| SinI | GGWCC | 1 cut(s) | 17 |
| SlaI | CTCGAG | 1 cut(s) | 182 |
| SmlI | CTYRAG | 2 cut(s) | 152, 182 |
| SmoI | CTYRAG | 2 cut(s) | 152, 182 |
| Sse9I | AATT | 1 cut(s) | 80 |
| SsiI | CCGC | 1 cut(s) | 142 |
| SspMI | CTAG | 1 cut(s) | 189 |
| StyD4I | CCNGG | 3 cut(s) | 11, 168, 192 |
| TaaI | ACNGT | 1 cut(s) | 208 |
| TaiI | ACGT | 3 cut(s) | 32, 50, 201 |
| TaqI | TCGA | 1 cut(s) | 183 |
| TasI | AATT | 1 cut(s) | 80 |
| TfiI | GAWTC | 2 cut(s) | 165, 178 |
| Tru1I | TTAA | 1 cut(s) | 220 |
| Tru9I | TTAA | 1 cut(s) | 220 |
| TscAI | CASTG | 1 cut(s) | 28 |
| TseI | GCWGC | 1 cut(s) | 8 |
| TspRI | CASTG | 1 cut(s) | 28 |
| VpaK11BI | GGWCC | 1 cut(s) | 17 |
| XhoI | CTCGAG | 1 cut(s) | 182 |
| XspI | CTAG | 1 cut(s) | 189 |