No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 663, 1080 |
| AccB1I | GGYRCC | 3 cut(s) | 618, 776, 1035 |
| AciI | CCGC | 1 cut(s) | 295 |
| AclWI | GGATC | 4 cut(s) | 485, 555, 902, 972 |
| AcoI | YGGCCR | 1 cut(s) | 763 |
| AcsI | RAATTY | 1 cut(s) | 362 |
| AcyI | GRCGYC | 3 cut(s) | 619, 777, 1036 |
| AfaI | GTAC | 1 cut(s) | 182 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 614, 1031 |
| AflIII | ACRYGT | 1 cut(s) | 183 |
| AgsI | TTSAA | 4 cut(s) | 230, 310, 814, 1231 |
| AjiI | CACGTC | 1 cut(s) | 70 |
| AjnI | CCWGG | 1 cut(s) | 63 |
| AluBI | AGCT | 6 cut(s) | 89, 95, 506, 577, 923, 994 |
| AluI | AGCT | 6 cut(s) | 89, 95, 506, 577, 923, 994 |
| Alw26I | GTCTC | 3 cut(s) | 226, 430, 847 |
| AlwI | GGATC | 4 cut(s) | 485, 555, 902, 972 |
| AoxI | GGCC | 3 cut(s) | 763, 1180, 1194 |
| ApeKI | GCWGC | 1 cut(s) | 113 |
| ApoI | RAATTY | 1 cut(s) | 362 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 339 |
| AspLEI | GCGC | 3 cut(s) | 621, 779, 1038 |
| AspS9I | GGNCC | 3 cut(s) | 665, 1082, 1194 |
| AvaII | GGWCC | 2 cut(s) | 665, 1082 |
| BalI | TGGCCA | 1 cut(s) | 765 |
| BanI | GGYRCC | 3 cut(s) | 618, 776, 1035 |
| BbsI | GAAGAC | 2 cut(s) | 207, 410 |
| BbvI | GCAGC | 1 cut(s) | 125 |
| BccI | CCATC | 5 cut(s) | 276, 430, 804, 847, 1221 |
| BciT130I | CCWGG | 1 cut(s) | 65 |
| BciVI | GTATCC | 2 cut(s) | 640, 1057 |
| BcoDI | GTCTC | 3 cut(s) | 226, 430, 847 |
| BfaI | CTAG | 1 cut(s) | 272 |
| BfmI | CTRYAG | 2 cut(s) | 468, 885 |
| BfoI | RGCGCY | 3 cut(s) | 622, 780, 1039 |
| BfuI | GTATCC | 2 cut(s) | 640, 1057 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 122 |
| BisI | GCNGC | 1 cut(s) | 114 |
| BlsI | GCNGC | 1 cut(s) | 115 |
| Bme1390I | CCNGG | 1 cut(s) | 65 |
| Bme18I | GGWCC | 2 cut(s) | 665, 1082 |
| BmgBI | CACGTC | 1 cut(s) | 70 |
| BmgT120I | GGNCC | 3 cut(s) | 665, 1082, 1194 |
| BmiI | GGNNCC | 6 cut(s) | 620, 719, 778, 1037, 1136, 1195 |
| BmrFI | CCNGG | 1 cut(s) | 65 |
| BmsI | GCATC | 1 cut(s) | 376 |
| BpiI | GAAGAC | 2 cut(s) | 207, 410 |
| BpmI | CTGGAG | 1 cut(s) | 161 |
| BpuEI | CTTGAG | 1 cut(s) | 75 |
| BsaAI | YACGTR | 1 cut(s) | 184 |
| BsaHI | GRCGYC | 3 cut(s) | 619, 777, 1036 |
| BsaI | GGTCTC | 1 cut(s) | 226 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 614, 1031 |
| Bse1I | ACTGG | 1 cut(s) | 178 |
| BseBI | CCWGG | 1 cut(s) | 65 |
| BseGI | GGATG | 2 cut(s) | 144, 172 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 614, 1031 |
| BseNI | ACTGG | 1 cut(s) | 178 |
| BseXI | GCAGC | 1 cut(s) | 125 |
| BshFI | GGCC | 3 cut(s) | 765, 1182, 1196 |
| BshNI | GGYRCC | 3 cut(s) | 618, 776, 1035 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 614, 1031 |
| BsmAI | GTCTC | 3 cut(s) | 226, 430, 847 |
| BsmBI | CGTCTC | 2 cut(s) | 430, 847 |
| BsnI | GGCC | 3 cut(s) | 765, 1182, 1196 |
| Bso31I | GGTCTC | 1 cut(s) | 226 |
| Bsp143I | GATC | 5 cut(s) | 378, 477, 560, 894, 977 |
| BspACI | CCGC | 1 cut(s) | 295 |
| BspANI | GGCC | 3 cut(s) | 765, 1182, 1196 |
| BspHI | TCATGA | 2 cut(s) | 490, 907 |
| BspLI | GGNNCC | 6 cut(s) | 620, 719, 778, 1037, 1136, 1195 |
| BspMAI | CTGCAG | 2 cut(s) | 472, 889 |
| BspPI | GGATC | 4 cut(s) | 485, 555, 902, 972 |
| BspT107I | GGYRCC | 3 cut(s) | 618, 776, 1035 |
| BspTNI | GGTCTC | 1 cut(s) | 226 |
| BsrI | ACTGG | 1 cut(s) | 178 |
| BssMI | GATC | 5 cut(s) | 378, 477, 560, 894, 977 |
| BssNI | GRCGYC | 3 cut(s) | 619, 777, 1036 |
| Bst2UI | CCWGG | 1 cut(s) | 65 |
| Bst4CI | ACNGT | 1 cut(s) | 79 |
| Bst6I | CTCTTC | 2 cut(s) | 718, 1135 |
| BstACI | GRCGYC | 3 cut(s) | 619, 777, 1036 |
| BstBAI | YACGTR | 1 cut(s) | 184 |
| BstC8I | GCNNGC | 1 cut(s) | 87 |
| BstDEI | CTNAG | 9 cut(s) | 118, 444, 609, 641, 789, 861, 1026, 1058, 1206 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 612, 1029 |
| BstF5I | GGATG | 2 cut(s) | 144, 172 |
| BstH2I | RGCGCY | 3 cut(s) | 622, 780, 1039 |
| BstHHI | GCGC | 3 cut(s) | 621, 779, 1038 |
| BstKTI | GATC | 5 cut(s) | 381, 480, 563, 897, 980 |
| BstMAI | GTCTC | 3 cut(s) | 226, 430, 847 |
| BstMBI | GATC | 5 cut(s) | 378, 477, 560, 894, 977 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 101, 110, 122, 131, 625, 1042 |
| BstNI | CCWGG | 1 cut(s) | 65 |
| BstSCI | CCNGG | 1 cut(s) | 63 |
| BstSFI | CTRYAG | 2 cut(s) | 468, 885 |
| BstV1I | GCAGC | 1 cut(s) | 125 |
| BstV2I | GAAGAC | 2 cut(s) | 207, 410 |
| BstX2I | RGATCY | 2 cut(s) | 560, 977 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 773 |
| BstYI | RGATCY | 2 cut(s) | 560, 977 |
| BsuI | GTATCC | 2 cut(s) | 640, 1057 |
| BsuRI | GGCC | 3 cut(s) | 765, 1182, 1196 |
| BtgZI | GCGATG | 1 cut(s) | 404 |
| BtrI | CACGTC | 1 cut(s) | 70 |
| BtsCI | GGATG | 2 cut(s) | 144, 172 |
| Cac8I | GCNNGC | 1 cut(s) | 87 |
| CciI | TCATGA | 2 cut(s) | 490, 907 |
| CfoI | GCGC | 3 cut(s) | 621, 779, 1038 |
| Cfr13I | GGNCC | 3 cut(s) | 665, 1082, 1194 |
| CseI | GACGC | 2 cut(s) | 815, 1232 |
| Csp6I | GTAC | 1 cut(s) | 181 |
| CviAII | CATG | 4 cut(s) | 491, 527, 908, 944 |
| CviQI | GTAC | 1 cut(s) | 181 |
| DdeI | CTNAG | 9 cut(s) | 118, 444, 609, 641, 789, 861, 1026, 1058, 1206 |
| DinI | GGCGCC | 3 cut(s) | 620, 778, 1037 |
| DpnI | GATC | 5 cut(s) | 380, 479, 562, 896, 979 |
| DpnII | GATC | 5 cut(s) | 378, 477, 560, 894, 977 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 663, 1080 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 663, 1080 |
| EaeI | YGGCCR | 1 cut(s) | 763 |
| Eam1104I | CTCTTC | 2 cut(s) | 718, 1135 |
| EarI | CTCTTC | 2 cut(s) | 718, 1135 |
| Eco31I | GGTCTC | 1 cut(s) | 226 |
| Eco47I | GGWCC | 2 cut(s) | 665, 1082 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 612, 1029 |
| EcoRI | GAATTC | 1 cut(s) | 362 |
| EcoRII | CCWGG | 1 cut(s) | 63 |
| EgeI | GGCGCC | 3 cut(s) | 620, 778, 1037 |
| EheI | GGCGCC | 3 cut(s) | 620, 778, 1037 |
| Esp3I | CGTCTC | 2 cut(s) | 430, 847 |
| FaeI | CATG | 4 cut(s) | 494, 530, 911, 947 |
| FatI | CATG | 4 cut(s) | 490, 526, 907, 943 |
| FauNDI | CATATG | 1 cut(s) | 162 |
| Fnu4HI | GCNGC | 1 cut(s) | 114 |
| FokI | GGATG | 2 cut(s) | 131, 179 |
| Fsp4HI | GCNGC | 1 cut(s) | 114 |
| FspBI | CTAG | 1 cut(s) | 272 |
| GlaI | GCGC | 3 cut(s) | 620, 778, 1037 |
| GluI | GCNGC | 1 cut(s) | 114 |
| GsuI | CTGGAG | 1 cut(s) | 161 |
| HaeII | RGCGCY | 3 cut(s) | 622, 780, 1039 |
| HaeIII | GGCC | 3 cut(s) | 765, 1182, 1196 |
| HgaI | GACGC | 2 cut(s) | 815, 1232 |
| HhaI | GCGC | 3 cut(s) | 621, 779, 1038 |
| Hin1I | GRCGYC | 3 cut(s) | 619, 777, 1036 |
| Hin1II | CATG | 4 cut(s) | 494, 530, 911, 947 |
| Hin6I | GCGC | 3 cut(s) | 619, 777, 1036 |
| HinP1I | GCGC | 3 cut(s) | 619, 777, 1036 |
| HincII | GTYRAC | 2 cut(s) | 731, 1148 |
| HindII | GTYRAC | 2 cut(s) | 731, 1148 |
| HindIII | AAGCTT | 1 cut(s) | 93 |
| HinfI | GANTC | 8 cut(s) | 154, 170, 254, 406, 456, 587, 873, 1004 |
| Hpy166II | GTNNAC | 2 cut(s) | 731, 1148 |
| Hpy188I | TCNGA | 4 cut(s) | 52, 334, 586, 1003 |
| Hpy188III | TCNNGA | 5 cut(s) | 320, 491, 558, 908, 975 |
| Hpy8I | GTNNAC | 2 cut(s) | 731, 1148 |
| HpyAV | CCTTC | 1 cut(s) | 204 |
| HpyCH4III | ACNGT | 1 cut(s) | 79 |
| HpyCH4IV | ACGT | 5 cut(s) | 69, 183, 246, 733, 1150 |
| HpyCH4V | TGCA | 2 cut(s) | 470, 887 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 101, 110, 122, 131, 625, 1042 |
| HpyF3I | CTNAG | 9 cut(s) | 118, 444, 609, 641, 789, 861, 1026, 1058, 1206 |
| HpySE526I | ACGT | 5 cut(s) | 69, 183, 246, 733, 1150 |
| Hsp92I | GRCGYC | 3 cut(s) | 619, 777, 1036 |
| Hsp92II | CATG | 4 cut(s) | 494, 530, 911, 947 |
| HspAI | GCGC | 3 cut(s) | 619, 777, 1036 |
| KasI | GGCGCC | 3 cut(s) | 618, 776, 1035 |
| Kzo9I | GATC | 5 cut(s) | 378, 477, 560, 894, 977 |
| LmnI | GCTCC | 3 cut(s) | 180, 503, 920 |
| Lsp1109I | GCAGC | 1 cut(s) | 125 |
| LweI | GCATC | 1 cut(s) | 376 |
| MaeI | CTAG | 1 cut(s) | 272 |
| MaeII | ACGT | 5 cut(s) | 69, 183, 246, 733, 1150 |
| MaeIII | GTNAC | 9 cut(s) | 5, 463, 599, 692, 752, 880, 1016, 1109, 1169 |
| MalI | GATC | 5 cut(s) | 380, 479, 562, 896, 979 |
| MboI | GATC | 5 cut(s) | 378, 477, 560, 894, 977 |
| MboII | GAAGA | 8 cut(s) | 209, 212, 242, 415, 556, 735, 973, 1152 |
| MfeI | CAATTG | 1 cut(s) | 42 |
| MflI | RGATCY | 2 cut(s) | 560, 977 |
| MlsI | TGGCCA | 1 cut(s) | 765 |
| MluCI | AATT | 8 cut(s) | 17, 42, 315, 362, 553, 592, 970, 1009 |
| MluNI | TGGCCA | 1 cut(s) | 765 |
| Mly113I | GGCGCC | 3 cut(s) | 619, 777, 1036 |
| MlyI | GAGTC | 2 cut(s) | 148, 400 |
| Mox20I | TGGCCA | 1 cut(s) | 765 |
| MroXI | GAANNNNTTC | 1 cut(s) | 339 |
| MscI | TGGCCA | 1 cut(s) | 765 |
| MseI | TTAA | 2 cut(s) | 348, 356 |
| MslI | CAYNNNNRTG | 6 cut(s) | 149, 165, 539, 801, 956, 1218 |
| Msp20I | TGGCCA | 1 cut(s) | 765 |
| MspR9I | CCNGG | 1 cut(s) | 65 |
| MunI | CAATTG | 1 cut(s) | 42 |
| MvaI | CCWGG | 1 cut(s) | 65 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 101, 110, 122, 131, 625, 1042 |
| NarI | GGCGCC | 3 cut(s) | 619, 777, 1036 |
| NdeI | CATATG | 1 cut(s) | 162 |
| NdeII | GATC | 5 cut(s) | 378, 477, 560, 894, 977 |
| NlaIII | CATG | 4 cut(s) | 494, 530, 911, 947 |
| NlaIV | GGNNCC | 6 cut(s) | 620, 719, 778, 1037, 1136, 1195 |
| NmuCI | GTSAC | 2 cut(s) | 599, 1016 |
| PagI | TCATGA | 2 cut(s) | 490, 907 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 75 |
| PdmI | GAANNNNTTC | 1 cut(s) | 339 |
| PfeI | GAWTC | 6 cut(s) | 170, 254, 456, 587, 873, 1004 |
| PkrI | GCNGC | 1 cut(s) | 115 |
| PleI | GAGTC | 2 cut(s) | 148, 400 |
| PluTI | GGCGCC | 3 cut(s) | 622, 780, 1039 |
| PpsI | GAGTC | 2 cut(s) | 148, 400 |
| Ppu21I | YACGTR | 1 cut(s) | 184 |
| Psp6I | CCWGG | 1 cut(s) | 63 |
| PspGI | CCWGG | 1 cut(s) | 63 |
| PspN4I | GGNNCC | 6 cut(s) | 620, 719, 778, 1037, 1136, 1195 |
| PspPI | GGNCC | 3 cut(s) | 665, 1082, 1194 |
| PstI | CTGCAG | 2 cut(s) | 472, 889 |
| PsuI | RGATCY | 2 cut(s) | 560, 977 |
| RsaI | GTAC | 1 cut(s) | 182 |
| RsaNI | GTAC | 1 cut(s) | 181 |
| RseI | CAYNNNNRTG | 6 cut(s) | 149, 165, 539, 801, 956, 1218 |
| SaqAI | TTAA | 2 cut(s) | 348, 356 |
| SatI | GCNGC | 1 cut(s) | 114 |
| Sau3AI | GATC | 5 cut(s) | 378, 477, 560, 894, 977 |
| Sau96I | GGNCC | 3 cut(s) | 665, 1082, 1194 |
| SchI | GAGTC | 2 cut(s) | 148, 400 |
| ScrFI | CCNGG | 1 cut(s) | 65 |
| SfaNI | GCATC | 1 cut(s) | 376 |
| SfcI | CTRYAG | 2 cut(s) | 468, 885 |
| SfoI | GGCGCC | 3 cut(s) | 620, 778, 1037 |
| SinI | GGWCC | 2 cut(s) | 665, 1082 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 149, 165, 539, 801, 956, 1218 |
| SmlI | CTYRAG | 1 cut(s) | 90 |
| SmoI | CTYRAG | 1 cut(s) | 90 |
| Sse9I | AATT | 8 cut(s) | 17, 42, 315, 362, 553, 592, 970, 1009 |
| SsiI | CCGC | 1 cut(s) | 295 |
| SspDI | GGCGCC | 3 cut(s) | 618, 776, 1035 |
| SspMI | CTAG | 1 cut(s) | 272 |
| StyD4I | CCNGG | 1 cut(s) | 63 |
| TaaI | ACNGT | 1 cut(s) | 79 |
| TaiI | ACGT | 5 cut(s) | 72, 186, 249, 736, 1153 |
| TaqI | TCGA | 4 cut(s) | 454, 557, 871, 974 |
| TasI | AATT | 8 cut(s) | 17, 42, 315, 362, 553, 592, 970, 1009 |
| TfiI | GAWTC | 6 cut(s) | 170, 254, 456, 587, 873, 1004 |
| Tru1I | TTAA | 2 cut(s) | 348, 356 |
| Tru9I | TTAA | 2 cut(s) | 348, 356 |
| TseFI | GTSAC | 2 cut(s) | 599, 1016 |
| TseI | GCWGC | 1 cut(s) | 113 |
| Tsp45I | GTSAC | 2 cut(s) | 599, 1016 |
| TspDTI | ATGAA | 4 cut(s) | 206, 210, 479, 896 |
| TspGWI | ACGGA | 7 cut(s) | 239, 490, 553, 730, 907, 970, 1147 |
| VpaK11BI | GGWCC | 2 cut(s) | 665, 1082 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 612, 1029 |
| XapI | RAATTY | 1 cut(s) | 362 |
| XmnI | GAANNNNTTC | 1 cut(s) | 339 |
| XspI | CTAG | 1 cut(s) | 272 |