No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 1026, 1120 |
| AccI | GTMKAC | 1 cut(s) | 389 |
| AccII | CGCG | 1 cut(s) | 112 |
| AccIII | TCCGGA | 1 cut(s) | 991 |
| AciI | CCGC | 6 cut(s) | 118, 121, 270, 337, 402, 625 |
| AclWI | GGATC | 2 cut(s) | 13, 893 |
| AcoI | YGGCCR | 1 cut(s) | 1107 |
| AcsI | RAATTY | 1 cut(s) | 770 |
| AfaI | GTAC | 3 cut(s) | 83, 480, 1196 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1022 |
| AflII | CTTAAG | 1 cut(s) | 251 |
| AflIII | ACRYGT | 1 cut(s) | 21 |
| AgsI | TTSAA | 4 cut(s) | 718, 952, 1158, 1182 |
| AjiI | CACGTC | 1 cut(s) | 24 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 630, 662 |
| AluBI | AGCT | 8 cut(s) | 191, 202, 232, 250, 497, 503, 705, 904 |
| AluI | AGCT | 8 cut(s) | 191, 202, 232, 250, 497, 503, 705, 904 |
| Alw21I | GWGCWC | 1 cut(s) | 906 |
| Alw26I | GTCTC | 5 cut(s) | 36, 200, 634, 928, 961 |
| AlwI | GGATC | 2 cut(s) | 13, 893 |
| Ama87I | CYCGRG | 1 cut(s) | 286 |
| Aor13HI | TCCGGA | 1 cut(s) | 991 |
| AoxI | GGCC | 3 cut(s) | 76, 435, 1107 |
| ApoI | RAATTY | 1 cut(s) | 770 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 747 |
| AspA2I | CCTAGG | 1 cut(s) | 10 |
| AspS9I | GGNCC | 1 cut(s) | 436 |
| AsuC2I | CCSGG | 1 cut(s) | 357 |
| AsuHPI | GGTGA | 1 cut(s) | 361 |
| AvaI | CYCGRG | 1 cut(s) | 286 |
| AvrII | CCTAGG | 1 cut(s) | 10 |
| AxyI | CCTNAGG | 1 cut(s) | 1017 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 1220 |
| BalI | TGGCCA | 1 cut(s) | 1109 |
| BamHI | GGATCC | 1 cut(s) | 5 |
| BanI | GGYRCC | 2 cut(s) | 1026, 1120 |
| BanII | GRGCYC | 1 cut(s) | 906 |
| BbsI | GAAGAC | 2 cut(s) | 615, 818 |
| Bbv12I | GWGCWC | 1 cut(s) | 906 |
| BccI | CCATC | 5 cut(s) | 684, 760, 838, 839, 876 |
| BcnI | CCSGG | 1 cut(s) | 357 |
| BcoDI | GTCTC | 5 cut(s) | 36, 200, 634, 928, 961 |
| BfaI | CTAG | 7 cut(s) | 11, 27, 449, 468, 680, 1049, 1067 |
| BfmI | CTRYAG | 1 cut(s) | 233 |
| BfrI | CTTAAG | 1 cut(s) | 251 |
| BisI | GCNGC | 2 cut(s) | 119, 122 |
| BlnI | CCTAGG | 1 cut(s) | 10 |
| BlsI | GCNGC | 2 cut(s) | 120, 123 |
| Bme1390I | CCNGG | 1 cut(s) | 357 |
| BmeT110I | CYCGRG | 1 cut(s) | 286 |
| BmgBI | CACGTC | 1 cut(s) | 24 |
| BmgT120I | GGNCC | 1 cut(s) | 436 |
| BmiI | GGNNCC | 6 cut(s) | 7, 135, 240, 913, 1028, 1122 |
| BmrFI | CCNGG | 1 cut(s) | 357 |
| BmsI | GCATC | 3 cut(s) | 859, 1140, 1222 |
| BpiI | GAAGAC | 2 cut(s) | 615, 818 |
| BpmI | CTGGAG | 1 cut(s) | 224 |
| BpuEI | CTTGAG | 3 cut(s) | 416, 482, 483 |
| BpuMI | CCSGG | 1 cut(s) | 357 |
| BsaI | GGTCTC | 2 cut(s) | 36, 634 |
| BsaJI | CCNNGG | 3 cut(s) | 10, 137, 439 |
| BsaWI | WCCGGW | 2 cut(s) | 991, 1216 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1022 |
| Bse118I | RCCGGY | 2 cut(s) | 78, 333 |
| Bse1I | ACTGG | 1 cut(s) | 397 |
| Bse21I | CCTNAGG | 1 cut(s) | 1017 |
| Bse3DI | GCAATG | 1 cut(s) | 1104 |
| BseAI | TCCGGA | 1 cut(s) | 991 |
| BseDI | CCNNGG | 3 cut(s) | 10, 137, 439 |
| BseGI | GGATG | 5 cut(s) | 552, 580, 942, 1140, 1213 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1022 |
| BseMI | GCAATG | 1 cut(s) | 1104 |
| BseMII | CTCAG | 2 cut(s) | 715, 1008 |
| BseNI | ACTGG | 1 cut(s) | 397 |
| Bsh1236I | CGCG | 1 cut(s) | 112 |
| BshFI | GGCC | 3 cut(s) | 78, 437, 1109 |
| BshNI | GGYRCC | 2 cut(s) | 1026, 1120 |
| BsiHKAI | GWGCWC | 1 cut(s) | 906 |
| BsiHKCI | CYCGRG | 1 cut(s) | 286 |
| BsiSI | CCGG | 6 cut(s) | 79, 242, 334, 356, 992, 1217 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1022 |
| BsmAI | GTCTC | 5 cut(s) | 36, 200, 634, 928, 961 |
| BsmI | GAATGC | 1 cut(s) | 647 |
| BsnI | GGCC | 3 cut(s) | 78, 437, 1109 |
| Bso31I | GGTCTC | 2 cut(s) | 36, 634 |
| BsoBI | CYCGRG | 1 cut(s) | 286 |
| Bsp1286I | GDGCHC | 1 cut(s) | 906 |
| Bsp13I | TCCGGA | 1 cut(s) | 991 |
| Bsp143I | GATC | 4 cut(s) | 5, 676, 885, 1071 |
| Bsp19I | CCATGG | 1 cut(s) | 137 |
| BspACI | CCGC | 6 cut(s) | 118, 121, 270, 337, 402, 625 |
| BspANI | GGCC | 3 cut(s) | 78, 437, 1109 |
| BspCNI | CTCAG | 2 cut(s) | 714, 1009 |
| BspEI | TCCGGA | 1 cut(s) | 991 |
| BspFNI | CGCG | 1 cut(s) | 112 |
| BspHI | TCATGA | 2 cut(s) | 898, 1171 |
| BspLI | GGNNCC | 6 cut(s) | 7, 135, 240, 913, 1028, 1122 |
| BspPI | GGATC | 2 cut(s) | 13, 893 |
| BspT107I | GGYRCC | 2 cut(s) | 1026, 1120 |
| BspTI | CTTAAG | 1 cut(s) | 251 |
| BspTNI | GGTCTC | 2 cut(s) | 36, 634 |
| BsrDI | GCAATG | 1 cut(s) | 1104 |
| BsrFI | RCCGGY | 2 cut(s) | 78, 333 |
| BsrI | ACTGG | 1 cut(s) | 397 |
| BssAI | RCCGGY | 2 cut(s) | 78, 333 |
| BssECI | CCNNGG | 3 cut(s) | 10, 137, 439 |
| BssMI | GATC | 4 cut(s) | 5, 676, 885, 1071 |
| BssT1I | CCWWGG | 3 cut(s) | 10, 137, 439 |
| Bst4CI | ACNGT | 2 cut(s) | 487, 724 |
| BstAFI | CTTAAG | 1 cut(s) | 251 |
| BstC8I | GCNNGC | 2 cut(s) | 335, 495 |
| BstDEI | CTNAG | 5 cut(s) | 701, 739, 852, 1017, 1133 |
| BstDSI | CCRYGG | 1 cut(s) | 137 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1020 |
| BstF5I | GGATG | 5 cut(s) | 552, 580, 942, 1140, 1213 |
| BstFNI | CGCG | 1 cut(s) | 112 |
| BstKTI | GATC | 4 cut(s) | 8, 679, 888, 1074 |
| BstMAI | GTCTC | 5 cut(s) | 36, 200, 634, 928, 961 |
| BstMBI | GATC | 4 cut(s) | 5, 676, 885, 1071 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 118, 229, 339, 509, 518 |
| BstNSI | RCATGY | 2 cut(s) | 227, 346 |
| BstSCI | CCNGG | 1 cut(s) | 355 |
| BstSFI | CTRYAG | 1 cut(s) | 233 |
| BstUI | CGCG | 1 cut(s) | 112 |
| BstV2I | GAAGAC | 2 cut(s) | 615, 818 |
| BstX2I | RGATCY | 1 cut(s) | 5 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1117 |
| BstYI | RGATCY | 1 cut(s) | 5 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1017 |
| BsuRI | GGCC | 3 cut(s) | 78, 437, 1109 |
| BtgI | CCRYGG | 1 cut(s) | 137 |
| BtgZI | GCGATG | 1 cut(s) | 812 |
| BtrI | CACGTC | 1 cut(s) | 24 |
| BtsCI | GGATG | 5 cut(s) | 552, 580, 942, 1140, 1213 |
| Cac8I | GCNNGC | 2 cut(s) | 335, 495 |
| CciI | TCATGA | 2 cut(s) | 898, 1171 |
| Cfr10I | RCCGGY | 2 cut(s) | 78, 333 |
| Cfr13I | GGNCC | 1 cut(s) | 436 |
| Csp6I | GTAC | 3 cut(s) | 82, 479, 1195 |
| CviQI | GTAC | 3 cut(s) | 82, 479, 1195 |
| DdeI | CTNAG | 5 cut(s) | 701, 739, 852, 1017, 1133 |
| DpnI | GATC | 4 cut(s) | 7, 678, 887, 1073 |
| DpnII | GATC | 4 cut(s) | 5, 676, 885, 1071 |
| DraI | TTTAAA | 1 cut(s) | 507 |
| EaeI | YGGCCR | 1 cut(s) | 1107 |
| EciI | GGCGGA | 1 cut(s) | 285 |
| Ecl136II | GAGCTC | 1 cut(s) | 904 |
| Eco130I | CCWWGG | 3 cut(s) | 10, 137, 439 |
| Eco24I | GRGCYC | 1 cut(s) | 906 |
| Eco31I | GGTCTC | 2 cut(s) | 36, 634 |
| Eco32I | GATATC | 1 cut(s) | 787 |
| Eco53kI | GAGCTC | 1 cut(s) | 904 |
| Eco81I | CCTNAGG | 1 cut(s) | 1017 |
| Eco88I | CYCGRG | 1 cut(s) | 286 |
| EcoICRI | GAGCTC | 1 cut(s) | 904 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1020 |
| EcoRI | GAATTC | 1 cut(s) | 770 |
| EcoRV | GATATC | 1 cut(s) | 787 |
| EcoT14I | CCWWGG | 3 cut(s) | 10, 137, 439 |
| EcoT38I | GRGCYC | 1 cut(s) | 906 |
| ErhI | CCWWGG | 3 cut(s) | 10, 137, 439 |
| FauI | CCCGC | 1 cut(s) | 618 |
| FblI | GTMKAC | 1 cut(s) | 389 |
| Fnu4HI | GCNGC | 2 cut(s) | 119, 122 |
| FokI | GGATG | 5 cut(s) | 539, 587, 929, 1127, 1200 |
| FriOI | GRGCYC | 1 cut(s) | 906 |
| Fsp4HI | GCNGC | 2 cut(s) | 119, 122 |
| FspBI | CTAG | 7 cut(s) | 11, 27, 449, 468, 680, 1049, 1067 |
| GluI | GCNGC | 2 cut(s) | 119, 122 |
| GsuI | CTGGAG | 1 cut(s) | 224 |
| HaeIII | GGCC | 3 cut(s) | 78, 437, 1109 |
| HapII | CCGG | 6 cut(s) | 79, 242, 334, 356, 992, 1217 |
| HincII | GTYRAC | 1 cut(s) | 390 |
| HindII | GTYRAC | 1 cut(s) | 390 |
| HindIII | AAGCTT | 2 cut(s) | 248, 501 |
| HpaII | CCGG | 6 cut(s) | 79, 242, 334, 356, 992, 1217 |
| HphI | GGTGA | 1 cut(s) | 361 |
| Hpy166II | GTNNAC | 2 cut(s) | 84, 390 |
| Hpy188I | TCNGA | 3 cut(s) | 133, 474, 928 |
| Hpy8I | GTNNAC | 2 cut(s) | 84, 390 |
| Hpy99I | CGWCG | 1 cut(s) | 391 |
| HpyAV | CCTTC | 2 cut(s) | 173, 835 |
| HpyCH4III | ACNGT | 2 cut(s) | 487, 724 |
| HpyCH4IV | ACGT | 7 cut(s) | 23, 217, 386, 477, 654, 1077, 1197 |
| HpyCH4V | TGCA | 2 cut(s) | 342, 878 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 118, 229, 339, 509, 518 |
| HpyF3I | CTNAG | 5 cut(s) | 701, 739, 852, 1017, 1133 |
| HpySE526I | ACGT | 7 cut(s) | 23, 217, 386, 477, 654, 1077, 1197 |
| Kpn2I | TCCGGA | 1 cut(s) | 991 |
| KroI | GCCGGC | 1 cut(s) | 333 |
| KroNI | GCCGGC | 1 cut(s) | 335 |
| Kzo9I | GATC | 4 cut(s) | 5, 676, 885, 1071 |
| LmnI | GCTCC | 3 cut(s) | 133, 911, 1210 |
| LweI | GCATC | 3 cut(s) | 859, 1140, 1222 |
| MaeI | CTAG | 7 cut(s) | 11, 27, 449, 468, 680, 1049, 1067 |
| MaeII | ACGT | 7 cut(s) | 23, 217, 386, 477, 654, 1077, 1197 |
| MaeIII | GTNAC | 1 cut(s) | 47 |
| MalI | GATC | 4 cut(s) | 7, 678, 887, 1073 |
| MboI | GATC | 4 cut(s) | 5, 676, 885, 1071 |
| MboII | GAAGA | 5 cut(s) | 617, 620, 650, 823, 964 |
| MfeI | CAATTG | 1 cut(s) | 1000 |
| MflI | RGATCY | 1 cut(s) | 5 |
| MhlI | GDGCHC | 1 cut(s) | 906 |
| MlsI | TGGCCA | 1 cut(s) | 1109 |
| MluCI | AATT | 4 cut(s) | 770, 864, 961, 1000 |
| MluNI | TGGCCA | 1 cut(s) | 1109 |
| MlyI | GAGTC | 3 cut(s) | 808, 1004, 1146 |
| MmeI | TCCRAC | 3 cut(s) | 111, 195, 304 |
| Mox20I | TGGCCA | 1 cut(s) | 1109 |
| MroI | TCCGGA | 1 cut(s) | 991 |
| MroNI | GCCGGC | 1 cut(s) | 333 |
| MroXI | GAANNNNTTC | 1 cut(s) | 747 |
| MscI | TGGCCA | 1 cut(s) | 1109 |
| MseI | TTAA | 4 cut(s) | 252, 377, 506, 756 |
| MslI | CAYNNNNRTG | 3 cut(s) | 347, 1115, 1145 |
| Msp20I | TGGCCA | 1 cut(s) | 1109 |
| MspCI | CTTAAG | 1 cut(s) | 251 |
| MspI | CCGG | 6 cut(s) | 79, 242, 334, 356, 992, 1217 |
| MspR9I | CCNGG | 1 cut(s) | 357 |
| MunI | CAATTG | 1 cut(s) | 1000 |
| Mva1269I | GAATGC | 1 cut(s) | 647 |
| MvnI | CGCG | 1 cut(s) | 112 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 118, 229, 339, 509, 518 |
| NaeI | GCCGGC | 1 cut(s) | 335 |
| NciI | CCSGG | 1 cut(s) | 357 |
| NcoI | CCATGG | 1 cut(s) | 137 |
| NdeII | GATC | 4 cut(s) | 5, 676, 885, 1071 |
| NgoMIV | GCCGGC | 1 cut(s) | 333 |
| NlaIV | GGNNCC | 6 cut(s) | 7, 135, 240, 913, 1028, 1122 |
| NmuCI | GTSAC | 1 cut(s) | 47 |
| NspI | RCATGY | 2 cut(s) | 227, 346 |
| PaeR7I | CTCGAG | 1 cut(s) | 286 |
| PagI | TCATGA | 2 cut(s) | 898, 1171 |
| PctI | GAATGC | 1 cut(s) | 647 |
| PdiI | GCCGGC | 1 cut(s) | 335 |
| PdmI | GAANNNNTTC | 1 cut(s) | 747 |
| PfeI | GAWTC | 8 cut(s) | 15, 167, 195, 352, 444, 457, 578, 662 |
| PkrI | GCNGC | 2 cut(s) | 120, 123 |
| PleI | GAGTC | 3 cut(s) | 808, 1003, 1145 |
| PpsI | GAGTC | 3 cut(s) | 808, 1003, 1145 |
| Psp124BI | GAGCTC | 1 cut(s) | 906 |
| PspN4I | GGNNCC | 6 cut(s) | 7, 135, 240, 913, 1028, 1122 |
| PspPI | GGNCC | 1 cut(s) | 436 |
| PspXI | VCTCGAGB | 1 cut(s) | 286 |
| PsuI | RGATCY | 1 cut(s) | 5 |
| RsaI | GTAC | 3 cut(s) | 83, 480, 1196 |
| RsaNI | GTAC | 3 cut(s) | 82, 479, 1195 |
| RseI | CAYNNNNRTG | 3 cut(s) | 347, 1115, 1145 |
| SacI | GAGCTC | 1 cut(s) | 906 |
| SalI | GTCGAC | 1 cut(s) | 388 |
| SaqAI | TTAA | 4 cut(s) | 252, 377, 506, 756 |
| SatI | GCNGC | 2 cut(s) | 119, 122 |
| Sau3AI | GATC | 4 cut(s) | 5, 676, 885, 1071 |
| Sau96I | GGNCC | 1 cut(s) | 436 |
| SchI | GAGTC | 3 cut(s) | 808, 1004, 1146 |
| ScrFI | CCNGG | 1 cut(s) | 357 |
| SduI | GDGCHC | 1 cut(s) | 906 |
| SfaNI | GCATC | 3 cut(s) | 859, 1140, 1222 |
| SfcI | CTRYAG | 1 cut(s) | 233 |
| Sfr274I | CTCGAG | 1 cut(s) | 286 |
| SlaI | CTCGAG | 1 cut(s) | 286 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 347, 1115, 1145 |
| SmlI | CTYRAG | 5 cut(s) | 251, 286, 431, 461, 498 |
| SmoI | CTYRAG | 5 cut(s) | 251, 286, 431, 461, 498 |
| Sse9I | AATT | 4 cut(s) | 770, 864, 961, 1000 |
| SsiI | CCGC | 6 cut(s) | 118, 121, 270, 337, 402, 625 |
| SspMI | CTAG | 7 cut(s) | 11, 27, 449, 468, 680, 1049, 1067 |
| SstI | GAGCTC | 1 cut(s) | 906 |
| StyD4I | CCNGG | 1 cut(s) | 355 |
| StyI | CCWWGG | 3 cut(s) | 10, 137, 439 |
| TaaI | ACNGT | 2 cut(s) | 487, 724 |
| TaiI | ACGT | 7 cut(s) | 26, 220, 389, 480, 657, 1080, 1200 |
| TaqI | TCGA | 7 cut(s) | 193, 198, 287, 389, 636, 965, 1203 |
| TasI | AATT | 4 cut(s) | 770, 864, 961, 1000 |
| TauI | GCSGC | 2 cut(s) | 121, 124 |
| TfiI | GAWTC | 8 cut(s) | 15, 167, 195, 352, 444, 457, 578, 662 |
| Tru1I | TTAA | 4 cut(s) | 252, 377, 506, 756 |
| Tru9I | TTAA | 4 cut(s) | 252, 377, 506, 756 |
| TseFI | GTSAC | 1 cut(s) | 47 |
| Tsp45I | GTSAC | 1 cut(s) | 47 |
| TspDTI | ATGAA | 4 cut(s) | 614, 618, 887, 932 |
| Vha464I | CTTAAG | 1 cut(s) | 251 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1020 |
| XapI | RAATTY | 1 cut(s) | 770 |
| XbaI | TCTAGA | 1 cut(s) | 679 |
| XceI | RCATGY | 2 cut(s) | 227, 346 |
| XhoI | CTCGAG | 1 cut(s) | 286 |
| XmaJI | CCTAGG | 1 cut(s) | 10 |
| XmiI | GTMKAC | 1 cut(s) | 389 |
| XmnI | GAANNNNTTC | 1 cut(s) | 747 |
| XspI | CTAG | 7 cut(s) | 11, 27, 449, 468, 680, 1049, 1067 |