No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 106 |
| AccB1I | GGYRCC | 2 cut(s) | 992, 1073 |
| AccII | CGCG | 4 cut(s) | 65, 199, 235, 272 |
| AciI | CCGC | 8 cut(s) | 88, 113, 172, 197, 270, 463, 745, 996 |
| AcsI | RAATTY | 2 cut(s) | 316, 812 |
| AcuI | CTGAAG | 2 cut(s) | 233, 364 |
| AfaI | GTAC | 1 cut(s) | 632 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 284, 298, 1018, 1022 |
| AgsI | TTSAA | 2 cut(s) | 760, 1109 |
| AjiI | CACGTC | 1 cut(s) | 520 |
| AjnI | CCWGG | 3 cut(s) | 167, 513, 1078 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 672, 704, 972, 1004 |
| AleI | CACNNNNGTG | 1 cut(s) | 227 |
| AluBI | AGCT | 5 cut(s) | 13, 539, 545, 946, 956 |
| AluI | AGCT | 5 cut(s) | 13, 539, 545, 946, 956 |
| Alw21I | GWGCWC | 2 cut(s) | 49, 948 |
| Alw26I | GTCTC | 1 cut(s) | 676 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 16 |
| Ama87I | CYCGRG | 1 cut(s) | 503 |
| AoxI | GGCC | 1 cut(s) | 37 |
| ApeKI | GCWGC | 3 cut(s) | 142, 563, 1088 |
| ApoI | RAATTY | 2 cut(s) | 316, 812 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 789 |
| AspA2I | CCTAGG | 1 cut(s) | 1016 |
| AspLEI | GCGC | 3 cut(s) | 237, 266, 1028 |
| AspS9I | GGNCC | 1 cut(s) | 38 |
| AsuHPI | GGTGA | 5 cut(s) | 68, 102, 1079, 1087, 1094 |
| AsuNHI | GCTAGC | 1 cut(s) | 122 |
| AvaI | CYCGRG | 1 cut(s) | 503 |
| AvrII | CCTAGG | 1 cut(s) | 1016 |
| BaeGI | GKGCMC | 1 cut(s) | 1078 |
| BanI | GGYRCC | 2 cut(s) | 992, 1073 |
| BanII | GRGCYC | 1 cut(s) | 948 |
| BauI | CACGAG | 1 cut(s) | 42 |
| BbsI | GAAGAC | 2 cut(s) | 657, 860 |
| Bbv12I | GWGCWC | 2 cut(s) | 49, 948 |
| BbvI | GCAGC | 3 cut(s) | 154, 575, 1075 |
| BccI | CCATC | 6 cut(s) | 289, 476, 599, 726, 1064, 1068 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 243, 277 |
| BciT130I | CCWGG | 3 cut(s) | 169, 515, 1080 |
| BciVI | GTATCC | 1 cut(s) | 487 |
| BcoDI | GTCTC | 1 cut(s) | 676 |
| BfaI | CTAG | 4 cut(s) | 123, 510, 722, 1017 |
| BfmI | CTRYAG | 1 cut(s) | 8 |
| BfuI | GTATCC | 1 cut(s) | 487 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 572 |
| BisI | GCNGC | 4 cut(s) | 143, 173, 564, 1089 |
| BlnI | CCTAGG | 1 cut(s) | 1016 |
| BlsI | GCNGC | 4 cut(s) | 144, 174, 565, 1090 |
| Bme1390I | CCNGG | 3 cut(s) | 169, 515, 1080 |
| BmeT110I | CYCGRG | 1 cut(s) | 503 |
| BmgBI | CACGTC | 1 cut(s) | 520 |
| BmgT120I | GGNCC | 1 cut(s) | 38 |
| BmiI | GGNNCC | 2 cut(s) | 994, 1075 |
| BmrFI | CCNGG | 3 cut(s) | 169, 515, 1080 |
| BmrI | ACTGGG | 1 cut(s) | 98 |
| BmsI | GCATC | 4 cut(s) | 154, 184, 1075, 1113 |
| BmtI | GCTAGC | 1 cut(s) | 126 |
| BmuI | ACTGGG | 1 cut(s) | 98 |
| BpiI | GAAGAC | 2 cut(s) | 657, 860 |
| BpmI | CTGGAG | 1 cut(s) | 611 |
| BpuEI | CTTGAG | 3 cut(s) | 458, 525, 1112 |
| BsaI | GGTCTC | 1 cut(s) | 676 |
| BsaJI | CCNNGG | 4 cut(s) | 988, 1016, 1047, 1078 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 284, 298, 1018, 1022 |
| Bse1I | ACTGG | 3 cut(s) | 104, 433, 628 |
| BseBI | CCWGG | 3 cut(s) | 169, 515, 1080 |
| BseDI | CCNNGG | 4 cut(s) | 988, 1016, 1047, 1078 |
| BseGI | GGATG | 6 cut(s) | 175, 281, 390, 594, 622, 984 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 284, 298, 1018, 1022 |
| BseMII | CTCAG | 1 cut(s) | 325 |
| BseNI | ACTGG | 3 cut(s) | 104, 433, 628 |
| BseSI | GKGCMC | 1 cut(s) | 1078 |
| BseXI | GCAGC | 3 cut(s) | 154, 575, 1075 |
| BseYI | CCCAGC | 1 cut(s) | 130 |
| Bsh1236I | CGCG | 4 cut(s) | 65, 199, 235, 272 |
| BshFI | GGCC | 1 cut(s) | 39 |
| BshNI | GGYRCC | 2 cut(s) | 992, 1073 |
| BsiHKAI | GWGCWC | 2 cut(s) | 49, 948 |
| BsiHKCI | CYCGRG | 1 cut(s) | 503 |
| BsiSI | CCGG | 1 cut(s) | 285 |
| BslFI | GGGAC | 1 cut(s) | 1016 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 284, 298, 1018, 1022 |
| BsmAI | GTCTC | 1 cut(s) | 676 |
| BsmFI | GGGAC | 1 cut(s) | 1016 |
| BsnI | GGCC | 1 cut(s) | 39 |
| Bso31I | GGTCTC | 1 cut(s) | 676 |
| BsoBI | CYCGRG | 1 cut(s) | 503 |
| Bsp1286I | GDGCHC | 3 cut(s) | 49, 948, 1078 |
| Bsp143I | GATC | 1 cut(s) | 828 |
| Bsp19I | CCATGG | 1 cut(s) | 1047 |
| Bsp68I | TCGCGA | 1 cut(s) | 65 |
| BspACI | CCGC | 8 cut(s) | 88, 113, 172, 197, 270, 463, 745, 996 |
| BspANI | GGCC | 1 cut(s) | 39 |
| BspCNI | CTCAG | 1 cut(s) | 324 |
| BspFNI | CGCG | 4 cut(s) | 65, 199, 235, 272 |
| BspHI | TCATGA | 1 cut(s) | 940 |
| BspLI | GGNNCC | 2 cut(s) | 994, 1075 |
| BspOI | GCTAGC | 1 cut(s) | 126 |
| BspT107I | GGYRCC | 2 cut(s) | 992, 1073 |
| BspTNI | GGTCTC | 1 cut(s) | 676 |
| BsrI | ACTGG | 3 cut(s) | 104, 433, 628 |
| BssECI | CCNNGG | 4 cut(s) | 988, 1016, 1047, 1078 |
| BssMI | GATC | 1 cut(s) | 828 |
| BssSI | CACGAG | 1 cut(s) | 42 |
| BssT1I | CCWWGG | 3 cut(s) | 988, 1016, 1047 |
| Bst2BI | CACGAG | 1 cut(s) | 42 |
| Bst2UI | CCWGG | 3 cut(s) | 169, 515, 1080 |
| Bst4CI | ACNGT | 1 cut(s) | 529 |
| Bst6I | CTCTTC | 1 cut(s) | 252 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 25 |
| BstC8I | GCNNGC | 7 cut(s) | 21, 30, 57, 124, 262, 537, 1024 |
| BstDEI | CTNAG | 4 cut(s) | 311, 568, 894, 1194 |
| BstDSI | CCRYGG | 1 cut(s) | 1047 |
| BstEII | GGTNACC | 1 cut(s) | 335 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 296 |
| BstF5I | GGATG | 6 cut(s) | 175, 281, 390, 594, 622, 984 |
| BstFNI | CGCG | 4 cut(s) | 65, 199, 235, 272 |
| BstHHI | GCGC | 3 cut(s) | 237, 266, 1028 |
| BstKTI | GATC | 1 cut(s) | 831 |
| BstMAI | GTCTC | 1 cut(s) | 676 |
| BstMBI | GATC | 1 cut(s) | 828 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 10, 25, 29, 551, 560, 572, 581, 1162 |
| BstNI | CCWGG | 3 cut(s) | 169, 515, 1080 |
| BstPI | GGTNACC | 1 cut(s) | 335 |
| BstSCI | CCNGG | 3 cut(s) | 167, 513, 1078 |
| BstSFI | CTRYAG | 1 cut(s) | 8 |
| BstSLI | GKGCMC | 1 cut(s) | 1078 |
| BstUI | CGCG | 4 cut(s) | 65, 199, 235, 272 |
| BstV1I | GCAGC | 3 cut(s) | 154, 575, 1075 |
| BstV2I | GAAGAC | 2 cut(s) | 657, 860 |
| BsuI | GTATCC | 1 cut(s) | 487 |
| BsuRI | GGCC | 1 cut(s) | 39 |
| BtgI | CCRYGG | 1 cut(s) | 1047 |
| BtgZI | GCGATG | 2 cut(s) | 131, 854 |
| BtrI | CACGTC | 1 cut(s) | 520 |
| BtsCI | GGATG | 6 cut(s) | 175, 281, 390, 594, 622, 984 |
| BtsIMutI | CAGTG | 1 cut(s) | 111 |
| BtuMI | TCGCGA | 1 cut(s) | 65 |
| Cac8I | GCNNGC | 7 cut(s) | 21, 30, 57, 124, 262, 537, 1024 |
| CaiI | CAGNNNCTG | 1 cut(s) | 16 |
| CciI | TCATGA | 1 cut(s) | 940 |
| CfoI | GCGC | 3 cut(s) | 237, 266, 1028 |
| Cfr13I | GGNCC | 1 cut(s) | 38 |
| CseI | GACGC | 2 cut(s) | 241, 1045 |
| Csp6I | GTAC | 1 cut(s) | 631 |
| CviAII | CATG | 4 cut(s) | 941, 977, 1048, 1064 |
| CviQI | GTAC | 1 cut(s) | 631 |
| DdeI | CTNAG | 4 cut(s) | 311, 568, 894, 1194 |
| DpnI | GATC | 1 cut(s) | 830 |
| DpnII | GATC | 1 cut(s) | 828 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 106 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 106 |
| Eam1104I | CTCTTC | 1 cut(s) | 252 |
| EarI | CTCTTC | 1 cut(s) | 252 |
| EciI | GGCGGA | 1 cut(s) | 452 |
| Ecl136II | GAGCTC | 1 cut(s) | 946 |
| Eco130I | CCWWGG | 3 cut(s) | 988, 1016, 1047 |
| Eco24I | GRGCYC | 1 cut(s) | 948 |
| Eco31I | GGTCTC | 1 cut(s) | 676 |
| Eco32I | GATATC | 1 cut(s) | 460 |
| Eco53kI | GAGCTC | 1 cut(s) | 946 |
| Eco57I | CTGAAG | 2 cut(s) | 233, 364 |
| Eco88I | CYCGRG | 1 cut(s) | 503 |
| Eco91I | GGTNACC | 1 cut(s) | 335 |
| EcoICRI | GAGCTC | 1 cut(s) | 946 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 296 |
| EcoO65I | GGTNACC | 1 cut(s) | 335 |
| EcoRI | GAATTC | 1 cut(s) | 812 |
| EcoRII | CCWGG | 3 cut(s) | 167, 513, 1078 |
| EcoRV | GATATC | 1 cut(s) | 460 |
| EcoT14I | CCWWGG | 3 cut(s) | 988, 1016, 1047 |
| EcoT38I | GRGCYC | 1 cut(s) | 948 |
| ErhI | CCWWGG | 3 cut(s) | 988, 1016, 1047 |
| FaeI | CATG | 4 cut(s) | 944, 980, 1051, 1067 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 12, 44 |
| FaqI | GGGAC | 1 cut(s) | 1016 |
| FatI | CATG | 4 cut(s) | 940, 976, 1047, 1063 |
| FauI | CCCGC | 1 cut(s) | 277 |
| FauNDI | CATATG | 1 cut(s) | 612 |
| Fnu4HI | GCNGC | 4 cut(s) | 143, 173, 564, 1089 |
| FokI | GGATG | 6 cut(s) | 162, 268, 397, 581, 629, 971 |
| FriOI | GRGCYC | 1 cut(s) | 948 |
| Fsp4HI | GCNGC | 4 cut(s) | 143, 173, 564, 1089 |
| FspBI | CTAG | 4 cut(s) | 123, 510, 722, 1017 |
| GlaI | GCGC | 3 cut(s) | 236, 265, 1027 |
| GluI | GCNGC | 4 cut(s) | 143, 173, 564, 1089 |
| GsaI | CCCAGC | 1 cut(s) | 134 |
| GsuI | CTGGAG | 1 cut(s) | 611 |
| HaeIII | GGCC | 1 cut(s) | 39 |
| HapII | CCGG | 1 cut(s) | 285 |
| HgaI | GACGC | 2 cut(s) | 241, 1045 |
| HhaI | GCGC | 3 cut(s) | 237, 266, 1028 |
| Hin1II | CATG | 4 cut(s) | 944, 980, 1051, 1067 |
| Hin6I | GCGC | 3 cut(s) | 235, 264, 1026 |
| HinP1I | GCGC | 3 cut(s) | 235, 264, 1026 |
| HindIII | AAGCTT | 1 cut(s) | 543 |
| HinfI | GANTC | 8 cut(s) | 73, 486, 499, 604, 620, 704, 856, 927 |
| HpaII | CCGG | 1 cut(s) | 285 |
| HphI | GGTGA | 5 cut(s) | 68, 102, 1079, 1087, 1094 |
| Hpy166II | GTNNAC | 1 cut(s) | 1006 |
| Hpy188I | TCNGA | 4 cut(s) | 314, 436, 784, 1122 |
| Hpy188III | TCNNGA | 6 cut(s) | 64, 382, 503, 716, 770, 941 |
| Hpy8I | GTNNAC | 1 cut(s) | 1006 |
| HpyAV | CCTTC | 3 cut(s) | 43, 388, 654 |
| HpyCH4III | ACNGT | 1 cut(s) | 529 |
| HpyCH4IV | ACGT | 2 cut(s) | 519, 696 |
| HpyCH4V | TGCA | 6 cut(s) | 19, 161, 183, 881, 920, 1091 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 10, 25, 29, 551, 560, 572, 581, 1162 |
| HpyF3I | CTNAG | 4 cut(s) | 311, 568, 894, 1194 |
| HpySE526I | ACGT | 2 cut(s) | 519, 696 |
| Hsp92II | CATG | 4 cut(s) | 944, 980, 1051, 1067 |
| HspAI | GCGC | 3 cut(s) | 235, 264, 1026 |
| Kzo9I | GATC | 1 cut(s) | 828 |
| LmnI | GCTCC | 6 cut(s) | 18, 242, 353, 418, 630, 953 |
| Lsp1109I | GCAGC | 3 cut(s) | 154, 575, 1075 |
| LweI | GCATC | 4 cut(s) | 154, 184, 1075, 1113 |
| MaeI | CTAG | 4 cut(s) | 123, 510, 722, 1017 |
| MaeII | ACGT | 2 cut(s) | 519, 696 |
| MaeIII | GTNAC | 6 cut(s) | 108, 229, 335, 389, 701, 913 |
| MalI | GATC | 1 cut(s) | 830 |
| MboI | GATC | 1 cut(s) | 828 |
| MboII | GAAGA | 5 cut(s) | 239, 659, 662, 692, 865 |
| MhlI | GDGCHC | 3 cut(s) | 49, 948, 1078 |
| MluCI | AATT | 4 cut(s) | 316, 364, 401, 812 |
| MlyI | GAGTC | 4 cut(s) | 67, 598, 698, 850 |
| MnlI | CCTC | 7 cut(s) | 51, 71, 148, 565, 752, 1009, 1176 |
| MroXI | GAANNNNTTC | 1 cut(s) | 789 |
| MseI | TTAA | 2 cut(s) | 798, 806 |
| MslI | CAYNNNNRTG | 5 cut(s) | 227, 599, 615, 1065, 1068 |
| MspI | CCGG | 1 cut(s) | 285 |
| MspR9I | CCNGG | 3 cut(s) | 169, 515, 1080 |
| MvaI | CCWGG | 3 cut(s) | 169, 515, 1080 |
| MvnI | CGCG | 4 cut(s) | 65, 199, 235, 272 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 10, 25, 29, 551, 560, 572, 581, 1162 |
| NcoI | CCATGG | 1 cut(s) | 1047 |
| NdeI | CATATG | 1 cut(s) | 612 |
| NdeII | GATC | 1 cut(s) | 828 |
| NheI | GCTAGC | 1 cut(s) | 122 |
| NlaIII | CATG | 4 cut(s) | 944, 980, 1051, 1067 |
| NlaIV | GGNNCC | 2 cut(s) | 994, 1075 |
| NmuCI | GTSAC | 3 cut(s) | 108, 229, 701 |
| NruI | TCGCGA | 1 cut(s) | 65 |
| OliI | CACNNNNGTG | 1 cut(s) | 227 |
| PaeR7I | CTCGAG | 1 cut(s) | 503 |
| PagI | TCATGA | 1 cut(s) | 940 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 225 |
| PdmI | GAANNNNTTC | 1 cut(s) | 789 |
| PfeI | GAWTC | 4 cut(s) | 486, 499, 620, 927 |
| PkrI | GCNGC | 4 cut(s) | 144, 174, 565, 1090 |
| PleI | GAGTC | 4 cut(s) | 67, 598, 698, 850 |
| PpsI | GAGTC | 4 cut(s) | 67, 598, 698, 850 |
| Psp124BI | GAGCTC | 1 cut(s) | 948 |
| Psp6I | CCWGG | 3 cut(s) | 167, 513, 1078 |
| PspEI | GGTNACC | 1 cut(s) | 335 |
| PspFI | CCCAGC | 1 cut(s) | 130 |
| PspGI | CCWGG | 3 cut(s) | 167, 513, 1078 |
| PspN4I | GGNNCC | 2 cut(s) | 994, 1075 |
| PspPI | GGNCC | 1 cut(s) | 38 |
| PstNI | CAGNNNCTG | 1 cut(s) | 16 |
| RruI | TCGCGA | 1 cut(s) | 65 |
| RsaI | GTAC | 1 cut(s) | 632 |
| RsaNI | GTAC | 1 cut(s) | 631 |
| RseI | CAYNNNNRTG | 5 cut(s) | 227, 599, 615, 1065, 1068 |
| SacI | GAGCTC | 1 cut(s) | 948 |
| SaqAI | TTAA | 2 cut(s) | 798, 806 |
| SatI | GCNGC | 4 cut(s) | 143, 173, 564, 1089 |
| Sau3AI | GATC | 1 cut(s) | 828 |
| Sau96I | GGNCC | 1 cut(s) | 38 |
| SchI | GAGTC | 4 cut(s) | 67, 598, 698, 850 |
| ScrFI | CCNGG | 3 cut(s) | 169, 515, 1080 |
| SduI | GDGCHC | 3 cut(s) | 49, 948, 1078 |
| SfaNI | GCATC | 4 cut(s) | 154, 184, 1075, 1113 |
| SfcI | CTRYAG | 1 cut(s) | 8 |
| Sfr274I | CTCGAG | 1 cut(s) | 503 |
| SlaI | CTCGAG | 1 cut(s) | 503 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 227, 599, 615, 1065, 1068 |
| SmlI | CTYRAG | 4 cut(s) | 473, 503, 540, 1127 |
| SmoI | CTYRAG | 4 cut(s) | 473, 503, 540, 1127 |
| Sse9I | AATT | 4 cut(s) | 316, 364, 401, 812 |
| SsiI | CCGC | 8 cut(s) | 88, 113, 172, 197, 270, 463, 745, 996 |
| SspMI | CTAG | 4 cut(s) | 123, 510, 722, 1017 |
| SstI | GAGCTC | 1 cut(s) | 948 |
| StyD4I | CCNGG | 3 cut(s) | 167, 513, 1078 |
| StyI | CCWWGG | 3 cut(s) | 988, 1016, 1047 |
| TaaI | ACNGT | 1 cut(s) | 529 |
| TaiI | ACGT | 2 cut(s) | 522, 699 |
| TaqI | TCGA | 3 cut(s) | 504, 678, 904 |
| TasI | AATT | 4 cut(s) | 316, 364, 401, 812 |
| TauI | GCSGC | 1 cut(s) | 175 |
| TfiI | GAWTC | 4 cut(s) | 486, 499, 620, 927 |
| Tru1I | TTAA | 2 cut(s) | 798, 806 |
| Tru9I | TTAA | 2 cut(s) | 798, 806 |
| TscAI | CASTG | 1 cut(s) | 111 |
| TseFI | GTSAC | 3 cut(s) | 108, 229, 701 |
| TseI | GCWGC | 3 cut(s) | 142, 563, 1088 |
| Tsp45I | GTSAC | 3 cut(s) | 108, 229, 701 |
| TspDTI | ATGAA | 5 cut(s) | 656, 660, 929, 974, 993 |
| TspGWI | ACGGA | 3 cut(s) | 217, 689, 991 |
| TspRI | CASTG | 1 cut(s) | 111 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 296 |
| XapI | RAATTY | 2 cut(s) | 316, 812 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1019, 1067 |
| XhoI | CTCGAG | 1 cut(s) | 503 |
| XmaJI | CCTAGG | 1 cut(s) | 1016 |
| XmnI | GAANNNNTTC | 1 cut(s) | 789 |
| XspI | CTAG | 4 cut(s) | 123, 510, 722, 1017 |