Rmu_sc0002705.1_g000020

gag-polypeptide of LTR copia-type

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002705.1
OG0000000
Physical Location & Seq
Forward (+)
73626 .. 74375
750 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002705.1_g000020.1.cds

Sequence Viewer

Length: 369 bp
atgtcagcaacaggacccactgccacgtcagccctccggtcaacaacattccggccattttccggtgactttttccgaatgagtaacttgaacaaattggactttgctccaataggaacaactggctctgaatatcacatgtgggttcgtgatatccgccagcatctcaaggccgatggaatcttggatccgattctcgagcctaaccaggacgtgctaactgttgagcaagttcaagctttggaagcaaatagagcagcattagaggcaaataaggcgaaagccatcatcctattgactcgtcatatggatgattcgctccagtatgagggtatgaatgaagaagaccccagaaggctatgggtctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Retrotran_gag_2 zf-CCHC

Protein Analysis

122

Amino Acids

13.78

Weight (kDa)

5.29

Isoelectric Point (pI)

51.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Tree File
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000000)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G21150
fragaria_vesca FvH4_1g17952 FvH4_1g26381 FvH4_2g34691 FvH4_2g34692 FvH4_2g36191 FvH4_3g14781 FvH4_4g19081 FvH4_5g21901 FvH4_5g21901 FvH4_5g37591 FvH4_5g37592 FvH4_6g23003 FvH4_6g35211 FvH4_6g35891 FvH4_6g37140 FvH4_6g38101 FvH4_6g40846 FvH4_7g18052 FvH4_7g19421
malus_domestica MD00G1036200.v1.1 MD11G1281300.v1.1 MD12G1147900.v1.1 MD15G1375400.v1.1
prunus_persica Prupe.3G020100_v2.0.a1 Prupe.7G013700_v2.0.a1
pyrus_communis pycom01g01790 pycom01g10050 pycom02g12240 pycom02g13210 pycom03g17900 pycom05g23410 pycom07g09020 pycom07g12770 pycom09g13370 pycom10g00960 pycom10g06470 pycom10g12020 pycom12g09280 pycom12g09890 pycom13g20020 pycom13g23180 pycom15g25190 pycom17g13970 pycom17g17390 pycom520g00410
rosa_chinensis RchiOBHm_Chr1g0313001 RchiOBHm_Chr1g0315131 RchiOBHm_Chr1g0317601 RchiOBHm_Chr1g0323201 RchiOBHm_Chr1g0323361 RchiOBHm_Chr1g0330071 RchiOBHm_Chr1g0344341 RchiOBHm_Chr1g0367391 RchiOBHm_Chr1g0373131 RchiOBHm_Chr1g0374181 RchiOBHm_Chr1g0375861 RchiOBHm_Chr1g0378351 RchiOBHm_Chr1g0383721 RchiOBHm_Chr2g0096411 RchiOBHm_Chr2g0103051 RchiOBHm_Chr2g0103151 RchiOBHm_Chr2g0122131 RchiOBHm_Chr2g0130811 RchiOBHm_Chr2g0140901 RchiOBHm_Chr2g0141621 RchiOBHm_Chr2g0149701 RchiOBHm_Chr2g0150871 RchiOBHm_Chr2g0165501 RchiOBHm_Chr3g0449141 RchiOBHm_Chr3g0465031 RchiOBHm_Chr3g0494141 RchiOBHm_Chr4g0388031 RchiOBHm_Chr4g0402081 RchiOBHm_Chr5g0007931 RchiOBHm_Chr7g0191191 RchiOBHm_Chr7g0205111 RchiOBHm_Chr7g0215831 RchiOBHm_Chr7g0234471
rosa_laevigata RLG00000006076 RLG00000017657 RLG00000018035 RLG00000019339 RLG00000020439 RLG00000024619 RLG00000027768 RLG00000029023 RLG00000034100
rosa_multiflora Rmu_co7974772.1_g000001 Rmu_co7998440.1_g000001 Rmu_co8031588.1_g000001 Rmu_co8035058.1_g000001 Rmu_co8038436.1_g000001 Rmu_co8041812.1_g000001 Rmu_co8048636.1_g000001 Rmu_co8055730.1_g000001 Rmu_co8059228.1_g000001 Rmu_co8069362.1_g000001 Rmu_co8078884.1_g000001 Rmu_co8098958.1_g000001 Rmu_co8104976.1_g000001 Rmu_co8120926.1_g000001 Rmu_co8133736.1_g000001 Rmu_co8139582.1_g000001 Rmu_co8185900.1_g000001 Rmu_co8189932.1_g000001 Rmu_co8203042.1_g000001 Rmu_co8231079.1_g000001 Rmu_co8244341.1_g000001 Rmu_co8251621.1_g000001 Rmu_co8267159.1_g000001 Rmu_co8270769.1_g000001 Rmu_co8275157.1_g000001 Rmu_co8302535.1_g000001 Rmu_co8304517.1_g000001 Rmu_co8314111.1_g000001 Rmu_co8324593.1_g000001 Rmu_co8336425.1_g000001 Rmu_co8340153.1_g000001 Rmu_co8345217.1_g000001 Rmu_co8352103.1_g000001 Rmu_co8369481.1_g000001 Rmu_co8390613.1_g000001 Rmu_co8394809.1_g000001 Rmu_co8402351.1_g000001 Rmu_co8403863.1_g000001 Rmu_co8419183.1_g000001 Rmu_co8426181.1_g000001 Rmu_co8436025.1_g000001 Rmu_co8436697.1_g000001 Rmu_co8466883.1_g000001 Rmu_co8486183.1_g000001 Rmu_co8520369.1_g000002 Rmu_sc0000002.1_g000004 Rmu_sc0000006.1_g000017 Rmu_sc0000010.1_g000010 Rmu_sc0000015.1_g000049 Rmu_sc0000029.1_g000030 Rmu_sc0000031.1_g000041 Rmu_sc0000033.1_g000013 Rmu_sc0000045.1_g000037 Rmu_sc0000046.1_g000002 Rmu_sc0000046.1_g000013 Rmu_sc0000047.1_g000026 Rmu_sc0000050.1_g000015 Rmu_sc0000060.1_g000003 Rmu_sc0000060.1_g000009 Rmu_sc0000060.1_g000047 Rmu_sc0000062.1_g000012 Rmu_sc0000070.1_g000036 Rmu_sc0000070.1_g000068 Rmu_sc0000076.1_g000027 Rmu_sc0000076.1_g000045 Rmu_sc0000077.1_g000010 Rmu_sc0000079.1_g000051 Rmu_sc0000081.1_g000008 Rmu_sc0000090.1_g000031 Rmu_sc0000096.1_g000025 Rmu_sc0000102.1_g000004 Rmu_sc0000103.1_g000024 Rmu_sc0000105.1_g000017 Rmu_sc0000110.1_g000013 Rmu_sc0000110.1_g000035 Rmu_sc0000117.1_g000020 Rmu_sc0000120.1_g000011 Rmu_sc0000124.1_g000031 Rmu_sc0000125.1_g000016 Rmu_sc0000129.1_g000010 Rmu_sc0000131.1_g000028 Rmu_sc0000144.1_g000013 Rmu_sc0000144.1_g000014 Rmu_sc0000147.1_g000019 Rmu_sc0000149.1_g000006 Rmu_sc0000149.1_g000026 Rmu_sc0000157.1_g000018 Rmu_sc0000157.1_g000036 Rmu_sc0000161.1_g000067 Rmu_sc0000161.1_g000072 Rmu_sc0000164.1_g000030 Rmu_sc0000182.1_g000005 Rmu_sc0000185.1_g000003 Rmu_sc0000190.1_g000005 Rmu_sc0000190.1_g000010 Rmu_sc0000192.1_g000010 Rmu_sc0000199.1_g000014 Rmu_sc0000200.1_g000005 Rmu_sc0000205.1_g000005 Rmu_sc0000208.1_g000016 Rmu_sc0000212.1_g000014 Rmu_sc0000212.1_g000016 Rmu_sc0000215.1_g000016 Rmu_sc0000221.1_g000035 Rmu_sc0000225.1_g000004 Rmu_sc0000228.1_g000008 Rmu_sc0000235.1_g000015 Rmu_sc0000235.1_g000036 Rmu_sc0000235.1_g000063 Rmu_sc0000239.1_g000094 Rmu_sc0000239.1_g000111 Rmu_sc0000240.1_g000004 Rmu_sc0000240.1_g000008 Rmu_sc0000240.1_g000073 Rmu_sc0000244.1_g000008 Rmu_sc0000251.1_g000024 Rmu_sc0000252.1_g000018 Rmu_sc0000252.1_g000033 Rmu_sc0000253.1_g000024 Rmu_sc0000258.1_g000036 Rmu_sc0000258.1_g000055 Rmu_sc0000258.1_g000060 Rmu_sc0000258.1_g000064 Rmu_sc0000259.1_g000006 Rmu_sc0000261.1_g000024 Rmu_sc0000275.1_g000005 Rmu_sc0000276.1_g000065 Rmu_sc0000293.1_g000035 Rmu_sc0000295.1_g000001 Rmu_sc0000295.1_g000033 Rmu_sc0000302.1_g000027 Rmu_sc0000302.1_g000055 Rmu_sc0000306.1_g000002 Rmu_sc0000307.1_g000003 Rmu_sc0000308.1_g000042 Rmu_sc0000309.1_g000041 Rmu_sc0000310.1_g000014 Rmu_sc0000315.1_g000075 Rmu_sc0000317.1_g000018 Rmu_sc0000317.1_g000056 Rmu_sc0000318.1_g000009 Rmu_sc0000319.1_g000022 Rmu_sc0000329.1_g000007 Rmu_sc0000333.1_g000041 Rmu_sc0000339.1_g000006 Rmu_sc0000339.1_g000014 Rmu_sc0000344.1_g000003 Rmu_sc0000344.1_g000012 Rmu_sc0000347.1_g000029 Rmu_sc0000347.1_g000034 Rmu_sc0000347.1_g000044 Rmu_sc0000347.1_g000054 Rmu_sc0000350.1_g000010 Rmu_sc0000352.1_g000007 Rmu_sc0000355.1_g000007 Rmu_sc0000359.1_g000007 Rmu_sc0000361.1_g000029 Rmu_sc0000365.1_g000081 Rmu_sc0000367.1_g000084 Rmu_sc0000367.1_g000144 Rmu_sc0000367.1_g000172 Rmu_sc0000367.1_g000206 Rmu_sc0000371.1_g000019 Rmu_sc0000373.1_g000021 Rmu_sc0000376.1_g000021 Rmu_sc0000376.1_g000032 Rmu_sc0000378.1_g000008 Rmu_sc0000378.1_g000014 Rmu_sc0000383.1_g000030 Rmu_sc0000388.1_g000031 Rmu_sc0000394.1_g000004 Rmu_sc0000394.1_g000059 Rmu_sc0000401.1_g000010 Rmu_sc0000401.1_g000023 Rmu_sc0000410.1_g000001 Rmu_sc0000410.1_g000012 Rmu_sc0000419.1_g000022 Rmu_sc0000423.1_g000025 Rmu_sc0000427.1_g000017 Rmu_sc0000429.1_g000096 Rmu_sc0000431.1_g000024 Rmu_sc0000433.1_g000008 Rmu_sc0000433.1_g000038 Rmu_sc0000434.1_g000003 Rmu_sc0000441.1_g000041 Rmu_sc0000441.1_g000105 Rmu_sc0000446.1_g000004 Rmu_sc0000447.1_g000009 Rmu_sc0000447.1_g000015 Rmu_sc0000449.1_g000022 Rmu_sc0000451.1_g000004 Rmu_sc0000452.1_g000017 Rmu_sc0000455.1_g000023 Rmu_sc0000455.1_g000028 Rmu_sc0000459.1_g000026 Rmu_sc0000468.1_g000009 Rmu_sc0000483.1_g000012 Rmu_sc0000487.1_g000035 Rmu_sc0000488.1_g000022 Rmu_sc0000489.1_g000002 Rmu_sc0000493.1_g000077 Rmu_sc0000494.1_g000006 Rmu_sc0000498.1_g000039 Rmu_sc0000500.1_g000009 Rmu_sc0000501.1_g000011 Rmu_sc0000504.1_g000021 Rmu_sc0000511.1_g000002 Rmu_sc0000511.1_g000003 Rmu_sc0000512.1_g000012 Rmu_sc0000517.1_g000024 Rmu_sc0000523.1_g000005 Rmu_sc0000527.1_g000015 Rmu_sc0000530.1_g000021 Rmu_sc0000533.1_g000019 Rmu_sc0000536.1_g000038 Rmu_sc0000539.1_g000078 Rmu_sc0000540.1_g000035 Rmu_sc0000542.1_g000004 Rmu_sc0000546.1_g000029 Rmu_sc0000556.1_g000050 Rmu_sc0000556.1_g000054 Rmu_sc0000558.1_g000008 Rmu_sc0000559.1_g000005 Rmu_sc0000563.1_g000009 Rmu_sc0000563.1_g000025 Rmu_sc0000566.1_g000020 Rmu_sc0000569.1_g000022 Rmu_sc0000571.1_g000002 Rmu_sc0000574.1_g000060 Rmu_sc0000579.1_g000007 Rmu_sc0000580.1_g000083 Rmu_sc0000580.1_g000107 Rmu_sc0000586.1_g000017 Rmu_sc0000588.1_g000043 Rmu_sc0000594.1_g000028 Rmu_sc0000594.1_g000078 Rmu_sc0000595.1_g000034 Rmu_sc0000607.1_g000029 Rmu_sc0000611.1_g000009 Rmu_sc0000611.1_g000010 Rmu_sc0000612.1_g000015 Rmu_sc0000614.1_g000007 Rmu_sc0000616.1_g000003 Rmu_sc0000617.1_g000016 Rmu_sc0000620.1_g000013 Rmu_sc0000621.1_g000012 Rmu_sc0000629.1_g000007 Rmu_sc0000637.1_g000004 Rmu_sc0000646.1_g000006 Rmu_sc0000647.1_g000010 Rmu_sc0000658.1_g000007 Rmu_sc0000660.1_g000022 Rmu_sc0000660.1_g000034 Rmu_sc0000666.1_g000026 Rmu_sc0000674.1_g000047 Rmu_sc0000676.1_g000015 Rmu_sc0000677.1_g000049 Rmu_sc0000679.1_g000013 Rmu_sc0000685.1_g000004 Rmu_sc0000687.1_g000022 Rmu_sc0000693.1_g000009 Rmu_sc0000694.1_g000003 Rmu_sc0000698.1_g000038 Rmu_sc0000701.1_g000001 Rmu_sc0000704.1_g000024 Rmu_sc0000706.1_g000015 Rmu_sc0000711.1_g000035 Rmu_sc0000714.1_g000006 Rmu_sc0000725.1_g000006 Rmu_sc0000730.1_g000017 Rmu_sc0000730.1_g000028 Rmu_sc0000733.1_g000019 Rmu_sc0000749.1_g000002 Rmu_sc0000749.1_g000044 Rmu_sc0000751.1_g000020 Rmu_sc0000753.1_g000038 Rmu_sc0000759.1_g000011 Rmu_sc0000762.1_g000063 Rmu_sc0000762.1_g000078 Rmu_sc0000775.1_g000024 Rmu_sc0000776.1_g000014 Rmu_sc0000776.1_g000062 Rmu_sc0000779.1_g000004 Rmu_sc0000779.1_g000029 Rmu_sc0000781.1_g000009 Rmu_sc0000790.1_g000031 Rmu_sc0000791.1_g000007 Rmu_sc0000791.1_g000020 Rmu_sc0000795.1_g000057 Rmu_sc0000800.1_g000003 Rmu_sc0000801.1_g000010 Rmu_sc0000805.1_g000003 Rmu_sc0000806.1_g000042 Rmu_sc0000808.1_g000055 Rmu_sc0000810.1_g000013 Rmu_sc0000811.1_g000002 Rmu_sc0000816.1_g000011 Rmu_sc0000818.1_g000002 Rmu_sc0000821.1_g000006 Rmu_sc0000830.1_g000070 Rmu_sc0000837.1_g000035 Rmu_sc0000837.1_g000038 Rmu_sc0000841.1_g000027 Rmu_sc0000842.1_g000004 Rmu_sc0000842.1_g000005 Rmu_sc0000842.1_g000036 Rmu_sc0000846.1_g000003 Rmu_sc0000850.1_g000006 Rmu_sc0000854.1_g000043 Rmu_sc0000854.1_g000054 Rmu_sc0000863.1_g000016 Rmu_sc0000863.1_g000034 Rmu_sc0000869.1_g000023 Rmu_sc0000876.1_g000009 Rmu_sc0000876.1_g000030 Rmu_sc0000890.1_g000014 Rmu_sc0000893.1_g000018 Rmu_sc0000893.1_g000019 Rmu_sc0000894.1_g000011 Rmu_sc0000894.1_g000075 Rmu_sc0000898.1_g000022 Rmu_sc0000898.1_g000034 Rmu_sc0000901.1_g000017 Rmu_sc0000901.1_g000022 Rmu_sc0000903.1_g000020 Rmu_sc0000904.1_g000015 Rmu_sc0000909.1_g000016 Rmu_sc0000918.1_g000006 Rmu_sc0000929.1_g000003 Rmu_sc0000929.1_g000025 Rmu_sc0000931.1_g000015 Rmu_sc0000935.1_g000012 Rmu_sc0000938.1_g000014 Rmu_sc0000939.1_g000016 Rmu_sc0000942.1_g000012 Rmu_sc0000948.1_g000003 Rmu_sc0000962.1_g000077 Rmu_sc0000977.1_g000005 Rmu_sc0000982.1_g000089 Rmu_sc0000982.1_g000093 Rmu_sc0000990.1_g000001 Rmu_sc0001009.1_g000029 Rmu_sc0001009.1_g000040 Rmu_sc0001017.1_g000004 Rmu_sc0001018.1_g000035 Rmu_sc0001023.1_g000027 Rmu_sc0001030.1_g000020 Rmu_sc0001035.1_g000038 Rmu_sc0001038.1_g000029 Rmu_sc0001047.1_g000035 Rmu_sc0001063.1_g000004 Rmu_sc0001075.1_g000021 Rmu_sc0001084.1_g000032 Rmu_sc0001089.1_g000015 Rmu_sc0001091.1_g000003 Rmu_sc0001091.1_g000006 Rmu_sc0001094.1_g000004 Rmu_sc0001095.1_g000007 Rmu_sc0001095.1_g000015 Rmu_sc0001097.1_g000008 Rmu_sc0001103.1_g000017 Rmu_sc0001104.1_g000008 Rmu_sc0001121.1_g000023 Rmu_sc0001127.1_g000003 Rmu_sc0001136.1_g000065 Rmu_sc0001140.1_g000013 Rmu_sc0001140.1_g000016 Rmu_sc0001144.1_g000016 Rmu_sc0001147.1_g000023 Rmu_sc0001148.1_g000037 Rmu_sc0001149.1_g000006 Rmu_sc0001152.1_g000034 Rmu_sc0001159.1_g000008 Rmu_sc0001161.1_g000005 Rmu_sc0001164.1_g000013 Rmu_sc0001167.1_g000052 Rmu_sc0001167.1_g000069 Rmu_sc0001168.1_g000015 Rmu_sc0001174.1_g000012 Rmu_sc0001179.1_g000007 Rmu_sc0001179.1_g000025 Rmu_sc0001179.1_g000033 Rmu_sc0001181.1_g000015 Rmu_sc0001184.1_g000003 Rmu_sc0001187.1_g000002 Rmu_sc0001188.1_g000009 Rmu_sc0001188.1_g000025 Rmu_sc0001190.1_g000005 Rmu_sc0001195.1_g000006 Rmu_sc0001197.1_g000008 Rmu_sc0001198.1_g000005 Rmu_sc0001204.1_g000015 Rmu_sc0001207.1_g000039 Rmu_sc0001207.1_g000057 Rmu_sc0001207.1_g000061 Rmu_sc0001207.1_g000094 Rmu_sc0001211.1_g000037 Rmu_sc0001211.1_g000040 Rmu_sc0001217.1_g000021 Rmu_sc0001218.1_g000045 Rmu_sc0001227.1_g000021 Rmu_sc0001257.1_g000006 Rmu_sc0001257.1_g000020 Rmu_sc0001260.1_g000027 Rmu_sc0001267.1_g000002 Rmu_sc0001289.1_g000008 Rmu_sc0001294.1_g000004 Rmu_sc0001298.1_g000026 Rmu_sc0001298.1_g000044 Rmu_sc0001301.1_g000033 Rmu_sc0001304.1_g000016 Rmu_sc0001304.1_g000052 Rmu_sc0001307.1_g000026 Rmu_sc0001308.1_g000045 Rmu_sc0001321.1_g000004 Rmu_sc0001336.1_g000047 Rmu_sc0001348.1_g000005 Rmu_sc0001350.1_g000032 Rmu_sc0001352.1_g000019 Rmu_sc0001353.1_g000044 Rmu_sc0001353.1_g000056 Rmu_sc0001355.1_g000041 Rmu_sc0001360.1_g000006 Rmu_sc0001361.1_g000019 Rmu_sc0001374.1_g000032 Rmu_sc0001377.1_g000017 Rmu_sc0001386.1_g000011 Rmu_sc0001392.1_g000009 Rmu_sc0001400.1_g000025 Rmu_sc0001403.1_g000038 Rmu_sc0001408.1_g000025 Rmu_sc0001416.1_g000008 Rmu_sc0001416.1_g000016 Rmu_sc0001418.1_g000014 Rmu_sc0001418.1_g000017 Rmu_sc0001423.1_g000041 Rmu_sc0001423.1_g000047 Rmu_sc0001423.1_g000056 Rmu_sc0001423.1_g000063 Rmu_sc0001423.1_g000064 Rmu_sc0001423.1_g000066 Rmu_sc0001432.1_g000001 Rmu_sc0001455.1_g000002 Rmu_sc0001459.1_g000016 Rmu_sc0001461.1_g000040 Rmu_sc0001461.1_g000103 Rmu_sc0001465.1_g000004 Rmu_sc0001468.1_g000017 Rmu_sc0001470.1_g000017 Rmu_sc0001484.1_g000005 Rmu_sc0001488.1_g000025 Rmu_sc0001493.1_g000025 Rmu_sc0001493.1_g000066 Rmu_sc0001497.1_g000003 Rmu_sc0001499.1_g000009 Rmu_sc0001499.1_g000058 Rmu_sc0001501.1_g000047 Rmu_sc0001501.1_g000081 Rmu_sc0001514.1_g000011 Rmu_sc0001516.1_g000093 Rmu_sc0001521.1_g000024 Rmu_sc0001521.1_g000062 Rmu_sc0001522.1_g000005 Rmu_sc0001522.1_g000030 Rmu_sc0001527.1_g000043 Rmu_sc0001531.1_g000007 Rmu_sc0001531.1_g000010 Rmu_sc0001545.1_g000006 Rmu_sc0001551.1_g000028 Rmu_sc0001552.1_g000050 Rmu_sc0001554.1_g000009 Rmu_sc0001554.1_g000028 Rmu_sc0001557.1_g000026 Rmu_sc0001571.1_g000024 Rmu_sc0001572.1_g000036 Rmu_sc0001577.1_g000012 Rmu_sc0001578.1_g000019 Rmu_sc0001582.1_g000009 Rmu_sc0001582.1_g000026 Rmu_sc0001588.1_g000015 Rmu_sc0001597.1_g000006 Rmu_sc0001606.1_g000021 Rmu_sc0001608.1_g000043 Rmu_sc0001609.1_g000002 Rmu_sc0001616.1_g000059 Rmu_sc0001618.1_g000007 Rmu_sc0001629.1_g000010 Rmu_sc0001634.1_g000015 Rmu_sc0001644.1_g000011 Rmu_sc0001647.1_g000004 Rmu_sc0001652.1_g000003 Rmu_sc0001657.1_g000005 Rmu_sc0001663.1_g000002 Rmu_sc0001673.1_g000010 Rmu_sc0001676.1_g000004 Rmu_sc0001677.1_g000027 Rmu_sc0001685.1_g000061 Rmu_sc0001685.1_g000074 Rmu_sc0001700.1_g000035 Rmu_sc0001700.1_g000046 Rmu_sc0001705.1_g000016 Rmu_sc0001706.1_g000012 Rmu_sc0001706.1_g000021 Rmu_sc0001708.1_g000042 Rmu_sc0001708.1_g000049 Rmu_sc0001714.1_g000003 Rmu_sc0001715.1_g000014 Rmu_sc0001717.1_g000010 Rmu_sc0001717.1_g000013 Rmu_sc0001719.1_g000004 Rmu_sc0001725.1_g000003 Rmu_sc0001725.1_g000009 Rmu_sc0001727.1_g000001 Rmu_sc0001729.1_g000009 Rmu_sc0001741.1_g000012 Rmu_sc0001744.1_g000007 Rmu_sc0001750.1_g000001 Rmu_sc0001758.1_g000001 Rmu_sc0001758.1_g000055 Rmu_sc0001759.1_g000004 Rmu_sc0001759.1_g000037 Rmu_sc0001762.1_g000033 Rmu_sc0001772.1_g000064 Rmu_sc0001775.1_g000011 Rmu_sc0001777.1_g000005 Rmu_sc0001782.1_g000040 Rmu_sc0001783.1_g000001 Rmu_sc0001785.1_g000028 Rmu_sc0001787.1_g000012 Rmu_sc0001793.1_g000014 Rmu_sc0001801.1_g000032 Rmu_sc0001803.1_g000017 Rmu_sc0001807.1_g000006 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Rmu_sc0011039.1_g000003 Rmu_sc0011052.1_g000010 Rmu_sc0011062.1_g000002 Rmu_sc0011073.1_g000006 Rmu_sc0011079.1_g000006 Rmu_sc0011128.1_g000006 Rmu_sc0011139.1_g000003 Rmu_sc0011139.1_g000008 Rmu_sc0011141.1_g000014 Rmu_sc0011169.1_g000003 Rmu_sc0011209.1_g000004 Rmu_sc0011242.1_g000002 Rmu_sc0011248.1_g000003 Rmu_sc0011264.1_g000001 Rmu_sc0011284.1_g000002 Rmu_sc0011309.1_g000001 Rmu_sc0011315.1_g000010 Rmu_sc0011334.1_g000004 Rmu_sc0011334.1_g000010 Rmu_sc0011339.1_g000001 Rmu_sc0011385.1_g000004 Rmu_sc0011396.1_g000020 Rmu_sc0011495.1_g000001 Rmu_sc0011517.1_g000005 Rmu_sc0011578.1_g000007 Rmu_sc0011578.1_g000016 Rmu_sc0011593.1_g000005 Rmu_sc0011657.1_g000018 Rmu_sc0011670.1_g000001 Rmu_sc0011792.1_g000003 Rmu_sc0011900.1_g000002 Rmu_sc0011910.1_g000027 Rmu_sc0011918.1_g000002 Rmu_sc0011921.1_g000004 Rmu_sc0011970.1_g000001 Rmu_sc0011997.1_g000002 Rmu_sc0011997.1_g000003 Rmu_sc0012010.1_g000003 Rmu_sc0012146.1_g000009 Rmu_sc0012185.1_g000002 Rmu_sc0012291.1_g000009 Rmu_sc0012300.1_g000001 Rmu_sc0012300.1_g000003 Rmu_sc0012306.1_g000008 Rmu_sc0012344.1_g000002 Rmu_sc0012503.1_g000002 Rmu_sc0012512.1_g000008 Rmu_sc0012512.1_g000011 Rmu_sc0012521.1_g000002 Rmu_sc0012535.1_g000010 Rmu_sc0012551.1_g000003 Rmu_sc0012607.1_g000005 Rmu_sc0012636.1_g000004 Rmu_sc0012673.1_g000003 Rmu_sc0012673.1_g000007 Rmu_sc0012818.1_g000001 Rmu_sc0012827.1_g000001 Rmu_sc0012836.1_g000005 Rmu_sc0012856.1_g000001 Rmu_sc0012876.1_g000003 Rmu_sc0012910.1_g000004 Rmu_sc0012920.1_g000006 Rmu_sc0012989.1_g000004 Rmu_sc0012989.1_g000005 Rmu_sc0012993.1_g000001 Rmu_sc0013000.1_g000005 Rmu_sc0013014.1_g000002 Rmu_sc0013099.1_g000004 Rmu_sc0013122.1_g000006 Rmu_sc0013126.1_g000009 Rmu_sc0013154.1_g000005 Rmu_sc0013203.1_g000022 Rmu_sc0013244.1_g000001 Rmu_sc0013245.1_g000013 Rmu_sc0013249.1_g000005 Rmu_sc0013266.1_g000002 Rmu_sc0013354.1_g000007 Rmu_sc0013374.1_g000006 Rmu_sc0013402.1_g000003 Rmu_sc0013411.1_g000004 Rmu_sc0013481.1_g000005 Rmu_sc0013512.1_g000003 Rmu_sc0013517.1_g000001 Rmu_sc0013532.1_g000010 Rmu_sc0013605.1_g000003 Rmu_sc0013612.1_g000003 Rmu_sc0013657.1_g000012 Rmu_sc0013758.1_g000006 Rmu_sc0013772.1_g000002 Rmu_sc0013801.1_g000012 Rmu_sc0013812.1_g000005 Rmu_sc0013821.1_g000001 Rmu_sc0013937.1_g000001 Rmu_sc0013948.1_g000003 Rmu_sc0013996.1_g000002 Rmu_sc0014065.1_g000001 Rmu_sc0014102.1_g000002 Rmu_sc0014177.1_g000006 Rmu_sc0014299.1_g000001 Rmu_sc0014338.1_g000001 Rmu_sc0014478.1_g000017 Rmu_sc0014584.1_g000006 Rmu_sc0014671.1_g000001 Rmu_sc0014744.1_g000002 Rmu_sc0014793.1_g000003 Rmu_sc0014811.1_g000012 Rmu_sc0014844.1_g000005 Rmu_sc0014893.1_g000004 Rmu_sc0014992.1_g000008 Rmu_sc0015053.1_g000001 Rmu_sc0015086.1_g000001 Rmu_sc0015351.1_g000005 Rmu_sc0015384.1_g000004 Rmu_sc0015390.1_g000001 Rmu_sc0015416.1_g000006 Rmu_sc0015432.1_g000003 Rmu_sc0015470.1_g000012 Rmu_sc0015556.1_g000001 Rmu_sc0015597.1_g000001 Rmu_sc0015660.1_g000001 Rmu_sc0015666.1_g000009 Rmu_sc0015707.1_g000002 Rmu_sc0015785.1_g000001 Rmu_sc0015920.1_g000001 Rmu_sc0015941.1_g000001 Rmu_sc0015963.1_g000003 Rmu_sc0015973.1_g000002 Rmu_sc0016199.1_g000001 Rmu_sc0016239.1_g000002 Rmu_sc0016258.1_g000004 Rmu_sc0016280.1_g000002 Rmu_sc0016402.1_g000001 Rmu_sc0016445.1_g000008 Rmu_sc0016644.1_g000001 Rmu_sc0016648.1_g000002 Rmu_sc0016731.1_g000004 Rmu_sc0016758.1_g000002 Rmu_sc0016775.1_g000002 Rmu_sc0016812.1_g000003 Rmu_sc0016812.1_g000004 Rmu_sc0016843.1_g000003 Rmu_sc0016879.1_g000004 Rmu_sc0016930.1_g000003 Rmu_sc0016972.1_g000007 Rmu_sc0017039.1_g000006 Rmu_sc0017105.1_g000010 Rmu_sc0017124.1_g000001 Rmu_sc0017312.1_g000001 Rmu_sc0017349.1_g000007 Rmu_sc0017395.1_g000008 Rmu_sc0017471.1_g000002 Rmu_sc0017481.1_g000001 Rmu_sc0017659.1_g000002 Rmu_sc0017777.1_g000002 Rmu_sc0017791.1_g000005 Rmu_sc0017853.1_g000007 Rmu_sc0017962.1_g000004 Rmu_sc0017962.1_g000010 Rmu_sc0017964.1_g000003 Rmu_sc0018018.1_g000001 Rmu_sc0018062.1_g000001 Rmu_sc0018127.1_g000002 Rmu_sc0018161.1_g000001 Rmu_sc0018257.1_g000001 Rmu_sc0018346.1_g000002 Rmu_sc0018420.1_g000001 Rmu_sc0018471.1_g000001 Rmu_sc0018485.1_g000007 Rmu_sc0018535.1_g000006 Rmu_sc0018535.1_g000007 Rmu_sc0018592.1_g000002 Rmu_sc0018620.1_g000001 Rmu_sc0018621.1_g000001 Rmu_sc0018746.1_g000002 Rmu_sc0018746.1_g000003 Rmu_sc0018857.1_g000003 Rmu_sc0018895.1_g000001 Rmu_sc0018909.1_g000010 Rmu_sc0019105.1_g000002 Rmu_sc0019236.1_g000002 Rmu_sc0019270.1_g000004 Rmu_sc0019370.1_g000007 Rmu_sc0019390.1_g000004 Rmu_sc0019766.1_g000009 Rmu_sc0019808.1_g000002 Rmu_sc0019961.1_g000002 Rmu_sc0020104.1_g000001 Rmu_sc0020180.1_g000001 Rmu_sc0020201.1_g000004 Rmu_sc0020478.1_g000005 Rmu_sc0020499.1_g000001 Rmu_sc0020727.1_g000001 Rmu_sc0021046.1_g000002 Rmu_sc0021148.1_g000001 Rmu_sc0021220.1_g000001 Rmu_sc0021259.1_g000001 Rmu_sc0021270.1_g000002 Rmu_sc0021316.1_g000004 Rmu_sc0021421.1_g000002 Rmu_sc0021452.1_g000001 Rmu_sc0021593.1_g000002 Rmu_sc0021613.1_g000005 Rmu_sc0021638.1_g000003 Rmu_sc0021871.1_g000008 Rmu_sc0021990.1_g000009 Rmu_sc0022084.1_g000002 Rmu_sc0022545.1_g000001 Rmu_sc0022641.1_g000001 Rmu_sc0022678.1_g000001 Rmu_sc0022690.1_g000001 Rmu_sc0022804.1_g000001 Rmu_sc0022851.1_g000002 Rmu_sc0022875.1_g000003 Rmu_sc0023015.1_g000004 Rmu_sc0023039.1_g000004 Rmu_sc0023364.1_g000001 Rmu_sc0023390.1_g000002 Rmu_sc0023794.1_g000001 Rmu_sc0023795.1_g000001 Rmu_sc0023915.1_g000001 Rmu_sc0023970.1_g000001 Rmu_sc0024020.1_g000001 Rmu_sc0024111.1_g000001 Rmu_sc0024447.1_g000004 Rmu_sc0024493.1_g000001 Rmu_sc0024820.1_g000002 Rmu_sc0025049.1_g000001 Rmu_sc0025068.1_g000001 Rmu_sc0025350.1_g000003 Rmu_sc0025463.1_g000002 Rmu_sc0025784.1_g000003 Rmu_sc0026037.1_g000001 Rmu_sc0026081.1_g000002 Rmu_sc0026289.1_g000001 Rmu_sc0026605.1_g000002 Rmu_sc0026815.1_g000002 Rmu_sc0026991.1_g000003 Rmu_sc0027230.1_g000004 Rmu_sc0027637.1_g000003 Rmu_sc0027812.1_g000002 Rmu_sc0027849.1_g000001 Rmu_sc0027912.1_g000001 Rmu_sc0028204.1_g000001 Rmu_sc0028301.1_g000001 Rmu_sc0028384.1_g000001 Rmu_sc0028819.1_g000001 Rmu_sc0029114.1_g000001 Rmu_sc0029125.1_g000001 Rmu_sc0029390.1_g000002 Rmu_sc0029425.1_g000001 Rmu_sc0029474.1_g000001 Rmu_sc0029541.1_g000001 Rmu_sc0030264.1_g000002 Rmu_sc0030657.1_g000001 Rmu_sc0030956.1_g000001 Rmu_sc0030974.1_g000002 Rmu_sc0031371.1_g000001 Rmu_sc0031765.1_g000001 Rmu_sc0031862.1_g000001 Rmu_sc0031944.1_g000003 Rmu_sc0031992.1_g000002 Rmu_sc0032000.1_g000002 Rmu_sc0032063.1_g000001 Rmu_sc0032223.1_g000001 Rmu_sc0032760.1_g000001 Rmu_sc0032800.1_g000002 Rmu_sc0033176.1_g000003 Rmu_sc0033881.1_g000002 Rmu_sc0033912.1_g000002 Rmu_sc0034192.1_g000001 Rmu_sc0034193.1_g000001 Rmu_sc0034463.1_g000001 Rmu_sc0034899.1_g000001 Rmu_sc0034962.1_g000001 Rmu_sc0035628.1_g000001 Rmu_sc0035628.1_g000002 Rmu_sc0035917.1_g000001 Rmu_sc0035986.1_g000001 Rmu_sc0036216.1_g000001 Rmu_sc0036526.1_g000001 Rmu_sc0036775.1_g000001 Rmu_sc0036787.1_g000001 Rmu_sc0037005.1_g000003 Rmu_sc0038168.1_g000002 Rmu_sc0038563.1_g000001 Rmu_sc0039332.1_g000002 Rmu_sc0040025.1_g000001 Rmu_sc0040065.1_g000006 Rmu_sc0040490.1_g000001 Rmu_sc0040600.1_g000001 Rmu_sc0040812.1_g000001 Rmu_sc0041718.1_g000001 Rmu_sc0041799.1_g000001 Rmu_sc0042328.1_g000001 Rmu_sc0042415.1_g000001 Rmu_sc0042821.1_g000001 Rmu_sc0042883.1_g000001 Rmu_ssc0000003.1_g000003 Rmu_ssc0000003.1_g000046 Rmu_ssc0000008.1_g000035 Rmu_ssc0000010.1_g000001 Rmu_ssc0000011.1_g000014 Rmu_ssc0000011.1_g000068 Rmu_ssc0000018.1_g000012 Rmu_ssc0000019.1_g000015 Rmu_ssc0000020.1_g000004 Rmu_ssc0000022.1_g000002 Rmu_ssc0000022.1_g000053 Rmu_ssc0000038.1_g000011 Rmu_ssc0000038.1_g000012 Rmu_ssc0000041.1_g000019 Rmu_ssc0000042.1_g000055 Rmu_ssc0000044.1_g000018 Rmu_ssc0000050.1_g000047 Rmu_ssc0000054.1_g000011 Rmu_ssc0000055.1_g000014 Rmu_ssc0000066.1_g000006 Rmu_ssc0000066.1_g000011 Rmu_ssc0000071.1_g000007 Rmu_ssc0000083.1_g000006 Rmu_ssc0000087.1_g000006 Rmu_ssc0000092.1_g000024 Rmu_ssc0000098.1_g000003 Rmu_ssc0000098.1_g000020 Rmu_ssc0000112.1_g000028 Rmu_ssc0000118.1_g000014 Rmu_ssc0000125.1_g000016 Rmu_ssc0000126.1_g000049 Rmu_ssc0000135.1_g000047 Rmu_ssc0000139.1_g000005 Rmu_ssc0000162.1_g000027 Rmu_ssc0000170.1_g000003 Rmu_ssc0000183.1_g000026 Rmu_ssc0000186.1_g000013 Rmu_ssc0000213.1_g000099 Rmu_ssc0000217.1_g000003 Rmu_ssc0000218.1_g000033 Rmu_ssc0000219.1_g000004 Rmu_ssc0000233.1_g000005 Rmu_ssc0000233.1_g000089 Rmu_ssc0000242.1_g000010 Rmu_ssc0000244.1_g000025 Rmu_ssc0000255.1_g000068 Rmu_ssc0000259.1_g000006 Rmu_ssc0000259.1_g000013 Rmu_ssc0000259.1_g000025 Rmu_ssc0000262.1_g000009 Rmu_ssc0000267.1_g000007 Rmu_ssc0000278.1_g000015 Rmu_ssc0000284.1_g000005 Rmu_ssc0000286.1_g000003 Rmu_ssc0000300.1_g000009 Rmu_ssc0000308.1_g000008 Rmu_ssc0000314.1_g000007 Rmu_ssc0000322.1_g000005 Rmu_ssc0000322.1_g000008 Rmu_ssc0000322.1_g000025 Rmu_ssc0000322.1_g000031 Rmu_ssc0000330.1_g000055 Rmu_ssc0000339.1_g000011 Rmu_ssc0000340.1_g000005 Rmu_ssc0000341.1_g000025 Rmu_ssc0000343.1_g000010 Rmu_ssc0000343.1_g000024 Rmu_ssc0000343.1_g000037 Rmu_ssc0000350.1_g000025 Rmu_ssc0000355.1_g000005 Rmu_ssc0000357.1_g000021 Rmu_ssc0000362.1_g000002 Rmu_ssc0000366.1_g000036 Rmu_ssc0000387.1_g000026 Rmu_ssc0000409.1_g000002 Rmu_ssc0000421.1_g000022 Rmu_ssc0000432.1_g000059 Rmu_ssc0000433.1_g000002 Rmu_ssc0000434.1_g000067 Rmu_ssc0000438.1_g000040 Rmu_ssc0000446.1_g000004 Rmu_ssc0000446.1_g000024 Rmu_ssc0000446.1_g000031 Rmu_ssc0000456.1_g000012 Rmu_ssc0000467.1_g000049 Rmu_ssc0000474.1_g000017 Rmu_ssc0000486.1_g000038
rosa_roxburghii Rroxscaffold_176G00431700 Rroxscaffold_176G00431800 Rroxscaffold_177G00434430 Rroxscaffold_1G00001510 Rroxscaffold_1G00011140 Rroxscaffold_1G00013540 Rroxscaffold_1G00013860 Rroxscaffold_1G00016170 Rroxscaffold_1G00033990 Rroxscaffold_1G00038530 Rroxscaffold_1G00039620 Rroxscaffold_1G00050000 Rroxscaffold_1G00057210 Rroxscaffold_1G00059510 Rroxscaffold_2G00084250 Rroxscaffold_2G00089340 Rroxscaffold_2G00093440 Rroxscaffold_2G00099180 Rroxscaffold_2G00101700 Rroxscaffold_2G00103030 Rroxscaffold_2G00107590 Rroxscaffold_2G00113380 Rroxscaffold_2G00113780 Rroxscaffold_2G00121750 Rroxscaffold_2G00130760 Rroxscaffold_2G00132070 Rroxscaffold_2G00132080 Rroxscaffold_2G00133170 Rroxscaffold_2G00136100 Rroxscaffold_2G00138240 Rroxscaffold_2G00141240 Rroxscaffold_3G00224870 Rroxscaffold_3G00228580 Rroxscaffold_3G00232190 Rroxscaffold_3G00248370 Rroxscaffold_3G00251110 Rroxscaffold_3G00251690 Rroxscaffold_3G00265720 Rroxscaffold_3G00276130 Rroxscaffold_4G00277140 Rroxscaffold_4G00279890 Rroxscaffold_4G00282470 Rroxscaffold_4G00291130 Rroxscaffold_4G00291190 Rroxscaffold_4G00291200 Rroxscaffold_4G00291210 Rroxscaffold_4G00292100 Rroxscaffold_4G00296420 Rroxscaffold_4G00307470 Rroxscaffold_4G00309280 Rroxscaffold_5G00334760 Rroxscaffold_5G00334780 Rroxscaffold_5G00342840 Rroxscaffold_5G00343200 Rroxscaffold_5G00345170 Rroxscaffold_5G00350050 Rroxscaffold_5G00353220 Rroxscaffold_5G00355780 Rroxscaffold_5G00356690 Rroxscaffold_5G00365260 Rroxscaffold_5G00382390 Rroxscaffold_5G00387310 Rroxscaffold_6G00388460 Rroxscaffold_6G00388640 Rroxscaffold_6G00392590 Rroxscaffold_6G00402320 Rroxscaffold_6G00410720 Rroxscaffold_6G00411680 Rroxscaffold_6G00416550 Rroxscaffold_6G00421600 Rroxscaffold_6G00424230 Rroxscaffold_7G00162980 Rroxscaffold_7G00168610 Rroxscaffold_7G00171090 Rroxscaffold_7G00179920 Rroxscaffold_7G00181440 Rroxscaffold_7G00182380 Rroxscaffold_7G00185380 Rroxscaffold_7G00204110 Rroxscaffold_7G00217090
rosa_rugosa Rorug01G0294100 Rorug02G0033600 Rorug02G0049400.1 Rorug02G0109300 Rorug02G0414700 Rorug05G0255600
rosa_samantha Rh1AG056900 Rh1AG163100 Rh1AG210000 Rh1AG233900 Rh1AG281500 Rh1AG299100 Rh1AG310300 Rh1AG370600 Rh1BG075900 Rh1BG124800 Rh1BG164900 Rh1DG346000 Rh2AG109300 Rh2AG212300 Rh2AG364700 Rh2BG060100 Rh2BG093500 Rh2BG132600 Rh2BG143300 Rh2BG158200 Rh2BG158300 Rh2BG205600 Rh2BG208600 Rh2BG208700 Rh2BG210400 Rh2BG210500 Rh2BG215700 Rh2BG240300 Rh2BG241200 Rh2BG254500 Rh2BG263700 Rh2BG265200 Rh2BG370400 Rh2BG398900 Rh2BG474000 Rh2BG486600 Rh2BG579900 Rh2BG678400 Rh2CG243000 Rh2DG218000 Rh2DG246900 Rh2DG387300 Rh2DG495900 Rh3BG012800 Rh3BG126300 Rh3BG127600 Rh3BG177700 Rh3BG177800 Rh3BG181500 Rh3BG217300 Rh3BG231500 Rh4AG128200 Rh4BG076800 Rh4CG017100 Rh4CG109400 Rh4CG124600 Rh4CG131400 Rh4CG138200 Rh4CG195100 Rh4CG200300 Rh4CG213200 Rh4CG229000 Rh4CG271600 Rh4CG292400 Rh4CG314900 Rh5AG145900 Rh5BG073900 Rh5BG127200 Rh5BG142300 Rh5BG220300 Rh5BG321800 Rh5BG324400 Rh5BG328000 Rh5BG383600 Rh5BG396400 Rh5BG396500 Rh5BG484100 Rh5BG532600 Rh5CG186700 Rh5DG144700 Rh5DG403600 Rh5DG407300 Rh6AG026900 Rh6AG027000 Rh6AG047900 Rh6AG086800 Rh6AG151400 Rh6AG153100 Rh6AG184200 Rh6AG223900 Rh6AG276500 Rh6AG359200 Rh6AG359300 Rh6AG378500 Rh6AG448800 Rh6CG112000 Rh6CG127300 Rh6DG014600 Rh7BG243700 Rh7CG010900 Rh7CG060900 Rh7CG109900 Rh7CG121900 Rh7CG143300 Rh7CG143400 Rh7CG216100 Rh7CG225700 Rh7CG228800 Rh7CG260100 Rh7CG306500 Rh7CG306600 Rh7CG321600 Rh7CG354600 Rh7CG356000 Rh7CG356100 Rh7CG425100 Rh7CG434300 Rh7CG441600 Rh7DG183200 Rh7DG233900
rosa_wichuraiana Rw0G000020 Rw0G004310 Rw0G008690 Rw0G010550 Rw0G020870 Rw1G001610 Rw1G017530 Rw1G021560 Rw1G022390 Rw1G022620 Rw1G026910 Rw1G027360 Rw1G031070 Rw2G012070 Rw2G012620 Rw2G013430 Rw2G013610 Rw2G015840 Rw2G016570 Rw2G024490 Rw2G029090 Rw2G029700 Rw2G031880 Rw2G033590 Rw2G038720 Rw3G002400 Rw3G015580 Rw3G022250 Rw3G024070 Rw3G025370 Rw4G000700 Rw4G027400 Rw4G031700 Rw4G033870 Rw5G009250 Rw5G011090 Rw5G023260 Rw5G023270 Rw5G024600 Rw5G041400 Rw5G049330 Rw5G049540 Rw6G006760 Rw6G007040 Rw6G011930 Rw6G021240 Rw6G021990 Rw6G029930 Rw6G030960 Rw7G003520 Rw7G020370 Rw7G022050 Rw7G022950 Rw7G032320 Rw7G032900 Rw7G034340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 157
AclWI GGATC 2 cut(s) 182, 195
AcoI YGGCCR 1 cut(s) 53
AfiI CCNNNNNNNGG 2 cut(s) 62, 328
AflIII ACRYGT 1 cut(s) 138
AgsI TTSAA 2 cut(s) 91, 236
AjiI CACGTC 2 cut(s) 27, 214
AjnI CCWGG 1 cut(s) 207
AluBI AGCT 1 cut(s) 239
AluI AGCT 1 cut(s) 239
AlwI GGATC 2 cut(s) 182, 195
Ama87I CYCGRG 1 cut(s) 197
AoxI GGCC 2 cut(s) 53, 171
ApeKI GCWGC 1 cut(s) 257
AspS9I GGNCC 1 cut(s) 14
AsuHPI GGTGA 1 cut(s) 77
AvaI CYCGRG 1 cut(s) 197
AvaII GGWCC 1 cut(s) 14
BamHI GGATCC 1 cut(s) 187
BbsI GAAGAC 1 cut(s) 351
BbvI GCAGC 1 cut(s) 269
BccI CCATC 2 cut(s) 170, 293
BciT130I CCWGG 1 cut(s) 209
BisI GCNGC 1 cut(s) 258
BlsI GCNGC 1 cut(s) 259
Bme1390I CCNGG 1 cut(s) 209
Bme18I GGWCC 1 cut(s) 14
BmeT110I CYCGRG 1 cut(s) 197
BmgBI CACGTC 2 cut(s) 27, 214
BmgT120I GGNCC 1 cut(s) 14
BmiI GGNNCC 2 cut(s) 16, 189
BmrFI CCNGG 1 cut(s) 209
BmsI GCATC 1 cut(s) 172
BpiI GAAGAC 1 cut(s) 351
BpmI CTGGAG 1 cut(s) 305
BpuEI CTTGAG 1 cut(s) 152
BsaWI WCCGGW 2 cut(s) 36, 62
Bsc4I CCNNNNNNNGG 2 cut(s) 62, 328
Bse1I ACTGG 2 cut(s) 127, 322
BseBI CCWGG 1 cut(s) 209
BseGI GGATG 2 cut(s) 288, 316
BseLI CCNNNNNNNGG 2 cut(s) 62, 328
BseNI ACTGG 2 cut(s) 127, 322
BseXI GCAGC 1 cut(s) 269
BshFI GGCC 2 cut(s) 55, 173
BsiHKCI CYCGRG 1 cut(s) 197
BsiSI CCGG 3 cut(s) 37, 52, 63
BslI CCNNNNNNNGG 2 cut(s) 62, 328
BsnI GGCC 2 cut(s) 55, 173
BsoBI CYCGRG 1 cut(s) 197
Bsp143I GATC 1 cut(s) 187
BspACI CCGC 1 cut(s) 157
BspANI GGCC 2 cut(s) 55, 173
BspLI GGNNCC 2 cut(s) 16, 189
BspPI GGATC 2 cut(s) 182, 195
BsrI ACTGG 2 cut(s) 127, 322
BssMI GATC 1 cut(s) 187
Bst2UI CCWGG 1 cut(s) 209
Bst4CI ACNGT 1 cut(s) 223
BstC8I GCNNGC 1 cut(s) 161
BstF5I GGATG 2 cut(s) 288, 316
BstKTI GATC 1 cut(s) 190
BstMBI GATC 1 cut(s) 187
BstMWI GCNNNNNNNGC 5 cut(s) 29, 245, 254, 266, 275
BstNI CCWGG 1 cut(s) 209
BstNSI RCATGY 1 cut(s) 142
BstSCI CCNGG 1 cut(s) 207
BstV1I GCAGC 1 cut(s) 269
BstV2I GAAGAC 1 cut(s) 351
BstX2I RGATCY 1 cut(s) 187
BstYI RGATCY 1 cut(s) 187
BsuRI GGCC 2 cut(s) 55, 173
BtrI CACGTC 2 cut(s) 27, 214
BtsCI GGATG 2 cut(s) 288, 316
BtsI GCAGTG 1 cut(s) 18
BtsIMutI CAGTG 1 cut(s) 18
Cac8I GCNNGC 1 cut(s) 161
Cfr13I GGNCC 1 cut(s) 14
CviAII CATG 1 cut(s) 139
CviJI RGCY 8 cut(s) 32, 55, 126, 173, 202, 239, 284, 358
CviKI_1 RGCY 8 cut(s) 32, 55, 126, 173, 202, 239, 284, 358
DpnI GATC 1 cut(s) 189
DpnII GATC 1 cut(s) 187
EaeI YGGCCR 1 cut(s) 53
EciI GGCGGA 1 cut(s) 146
Eco32I GATATC 1 cut(s) 154
Eco47I GGWCC 1 cut(s) 14
Eco88I CYCGRG 1 cut(s) 197
EcoO109I RGGNCCY 1 cut(s) 14
EcoRII CCWGG 1 cut(s) 207
EcoRV GATATC 1 cut(s) 154
FaeI CATG 1 cut(s) 142
FaiI YATR 6 cut(s) 140, 306, 308, 327, 335, 361
FatI CATG 1 cut(s) 138
FauNDI CATATG 1 cut(s) 306
Fnu4HI GCNGC 1 cut(s) 258
FokI GGATG 2 cut(s) 275, 323
Fsp4HI GCNGC 1 cut(s) 258
GluI GCNGC 1 cut(s) 258
GsuI CTGGAG 1 cut(s) 305
HaeIII GGCC 2 cut(s) 55, 173
HapII CCGG 3 cut(s) 37, 52, 63
Hin1II CATG 1 cut(s) 142
HincII GTYRAC 1 cut(s) 42
HindII GTYRAC 1 cut(s) 42
HindIII AAGCTT 1 cut(s) 237
HinfI GANTC 4 cut(s) 180, 193, 298, 314
HpaII CCGG 3 cut(s) 37, 52, 63
HphI GGTGA 1 cut(s) 77
Hpy166II GTNNAC 1 cut(s) 42
Hpy188I TCNGA 4 cut(s) 77, 130, 192, 368
Hpy188III TCNNGA 2 cut(s) 149, 197
Hpy8I GTNNAC 1 cut(s) 42
HpyAV CCTTC 1 cut(s) 348
HpyCH4III ACNGT 1 cut(s) 223
HpyCH4IV ACGT 2 cut(s) 26, 213
HpyF10VI GCNNNNNNNGC 5 cut(s) 29, 245, 254, 266, 275
HpySE526I ACGT 2 cut(s) 26, 213
Hsp92II CATG 1 cut(s) 142
Kzo9I GATC 1 cut(s) 187
LmnI GCTCC 2 cut(s) 112, 324
LpnPI CCDG 9 cut(s) 50, 65, 76, 108, 173, 194, 221, 335, 364
Lsp1109I GCAGC 1 cut(s) 269
LweI GCATC 1 cut(s) 172
MaeII ACGT 2 cut(s) 26, 213
MaeIII GTNAC 2 cut(s) 65, 83
MalI GATC 1 cut(s) 189
MboI GATC 1 cut(s) 187
MboII GAAGA 2 cut(s) 353, 356
MflI RGATCY 1 cut(s) 187
MluCI AATT 1 cut(s) 95
MlyI GAGTC 1 cut(s) 292
MnlI CCTC 3 cut(s) 44, 259, 322
MslI CAYNNNNRTG 1 cut(s) 309
MspI CCGG 3 cut(s) 37, 52, 63
MspR9I CCNGG 1 cut(s) 209
MvaI CCWGG 1 cut(s) 209
MwoI GCNNNNNNNGC 5 cut(s) 29, 245, 254, 266, 275
NdeI CATATG 1 cut(s) 306
NdeII GATC 1 cut(s) 187
NlaIII CATG 1 cut(s) 142
NlaIV GGNNCC 2 cut(s) 16, 189
NmuCI GTSAC 1 cut(s) 65
NspI RCATGY 1 cut(s) 142
PaeR7I CTCGAG 1 cut(s) 197
PciI ACATGT 1 cut(s) 138
PfeI GAWTC 3 cut(s) 180, 193, 314
PkrI GCNGC 1 cut(s) 259
PleI GAGTC 1 cut(s) 292
PpsI GAGTC 1 cut(s) 292
PpuMI RGGWCCY 1 cut(s) 14
PscI ACATGT 1 cut(s) 138
Psp5II RGGWCCY 1 cut(s) 14
Psp6I CCWGG 1 cut(s) 207
PspGI CCWGG 1 cut(s) 207
PspN4I GGNNCC 2 cut(s) 16, 189
PspPI GGNCC 1 cut(s) 14
PspPPI RGGWCCY 1 cut(s) 14
PsuI RGATCY 1 cut(s) 187
RseI CAYNNNNRTG 1 cut(s) 309
SatI GCNGC 1 cut(s) 258
Sau3AI GATC 1 cut(s) 187
Sau96I GGNCC 1 cut(s) 14
SchI GAGTC 1 cut(s) 292
ScrFI CCNGG 1 cut(s) 209
SetI ASST 3 cut(s) 29, 216, 241
SfaNI GCATC 1 cut(s) 172
Sfr274I CTCGAG 1 cut(s) 197
SinI GGWCC 1 cut(s) 14
SlaI CTCGAG 1 cut(s) 197
SmiMI CAYNNNNRTG 1 cut(s) 309
SmlI CTYRAG 2 cut(s) 167, 197
SmoI CTYRAG 2 cut(s) 167, 197
Sse9I AATT 1 cut(s) 95
SsiI CCGC 1 cut(s) 157
StyD4I CCNGG 1 cut(s) 207
TaaI ACNGT 1 cut(s) 223
TaiI ACGT 2 cut(s) 29, 216
TaqI TCGA 1 cut(s) 198
TasI AATT 1 cut(s) 95
TfiI GAWTC 3 cut(s) 180, 193, 314
TscAI CASTG 1 cut(s) 25
TseFI GTSAC 1 cut(s) 65
TseI GCWGC 1 cut(s) 257
Tsp45I GTSAC 1 cut(s) 65
TspDTI ATGAA 2 cut(s) 350, 354
TspRI CASTG 1 cut(s) 25
VpaK11BI GGWCC 1 cut(s) 14
XceI RCATGY 1 cut(s) 142
XhoI CTCGAG 1 cut(s) 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.