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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1165 |
| Acc36I | ACCTGC | 1 cut(s) | 178 |
| AccB1I | GGYRCC | 3 cut(s) | 918, 1028, 1109 |
| AccBSI | CCGCTC | 1 cut(s) | 915 |
| AccI | GTMKAC | 1 cut(s) | 120 |
| AccII | CGCG | 2 cut(s) | 68, 903 |
| AccIII | TCCGGA | 1 cut(s) | 883 |
| AciI | CCGC | 7 cut(s) | 68, 82, 252, 311, 595, 915, 1032 |
| AclI | AACGTT | 1 cut(s) | 1151 |
| AclWI | GGATC | 6 cut(s) | 71, 159, 279, 355, 368, 855 |
| AcoI | YGGCCR | 1 cut(s) | 338 |
| AcsI | RAATTY | 1 cut(s) | 662 |
| AcyI | GRCGYC | 2 cut(s) | 919, 1110 |
| AdeI | CACNNNGTG | 1 cut(s) | 129 |
| AfaI | GTAC | 2 cut(s) | 355, 557 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 60, 81, 168, 914, 1054, 1058 |
| AgsI | TTSAA | 5 cut(s) | 175, 268, 278, 610, 1145 |
| AjiI | CACGTC | 1 cut(s) | 445 |
| AjnI | CCWGG | 2 cut(s) | 438, 1114 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 55, 87 |
| AluBI | AGCT | 4 cut(s) | 464, 470, 796, 806 |
| AluI | AGCT | 4 cut(s) | 464, 470, 796, 806 |
| Alw21I | GWGCWC | 2 cut(s) | 134, 798 |
| Alw26I | GTCTC | 1 cut(s) | 730 |
| AlwI | GGATC | 6 cut(s) | 71, 159, 279, 355, 368, 855 |
| Aor13HI | TCCGGA | 1 cut(s) | 883 |
| AoxI | GGCC | 2 cut(s) | 11, 338 |
| ApeKI | GCWGC | 1 cut(s) | 158 |
| ApoI | RAATTY | 1 cut(s) | 662 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 639, 707 |
| AspA2I | CCTAGG | 1 cut(s) | 1052 |
| AspLEI | GCGC | 4 cut(s) | 905, 921, 1064, 1112 |
| AspS9I | GGNCC | 1 cut(s) | 190 |
| AsuHPI | GGTGA | 3 cut(s) | 520, 1115, 1130 |
| AvaII | GGWCC | 1 cut(s) | 190 |
| AvrII | CCTAGG | 1 cut(s) | 1052 |
| BaeGI | GKGCMC | 1 cut(s) | 1031 |
| BalI | TGGCCA | 1 cut(s) | 340 |
| BamHI | GGATCC | 1 cut(s) | 360 |
| BanI | GGYRCC | 3 cut(s) | 918, 1028, 1109 |
| BanII | GRGCYC | 1 cut(s) | 798 |
| BbsI | GAAGAC | 3 cut(s) | 40, 582, 710 |
| Bbv12I | GWGCWC | 2 cut(s) | 134, 798 |
| BbvI | GCAGC | 1 cut(s) | 170 |
| BccI | CCATC | 7 cut(s) | 103, 242, 291, 524, 730, 1100, 1104 |
| BceAI | ACGGC | 1 cut(s) | 221 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1018, 1052 |
| BciT130I | CCWGG | 2 cut(s) | 440, 1116 |
| BcoDI | GTCTC | 1 cut(s) | 730 |
| BfaI | CTAG | 2 cut(s) | 963, 1053 |
| BfoI | RGCGCY | 2 cut(s) | 922, 1113 |
| BfuAI | ACCTGC | 1 cut(s) | 178 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 497 |
| BisI | GCNGC | 1 cut(s) | 159 |
| BlnI | CCTAGG | 1 cut(s) | 1052 |
| BlsI | GCNGC | 1 cut(s) | 160 |
| Bme1390I | CCNGG | 2 cut(s) | 440, 1116 |
| Bme18I | GGWCC | 1 cut(s) | 190 |
| BmgBI | CACGTC | 1 cut(s) | 445 |
| BmgT120I | GGNCC | 1 cut(s) | 190 |
| BmiI | GGNNCC | 7 cut(s) | 73, 362, 590, 920, 1018, 1030, 1111 |
| BmrFI | CCNGG | 2 cut(s) | 440, 1116 |
| BmsI | GCATC | 2 cut(s) | 1101, 1114 |
| BpiI | GAAGAC | 3 cut(s) | 40, 582, 710 |
| BpmI | CTGGAG | 1 cut(s) | 536 |
| BpuEI | CTTGAG | 1 cut(s) | 450 |
| BsaAI | YACGTR | 1 cut(s) | 353 |
| BsaHI | GRCGYC | 2 cut(s) | 919, 1110 |
| BsaJI | CCNNGG | 5 cut(s) | 104, 341, 1052, 1083, 1114 |
| BsaWI | WCCGGW | 1 cut(s) | 883 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 60, 81, 168, 914, 1054, 1058 |
| Bse118I | RCCGGY | 1 cut(s) | 161 |
| Bse1I | ACTGG | 4 cut(s) | 153, 399, 424, 553 |
| BseAI | TCCGGA | 1 cut(s) | 883 |
| BseBI | CCWGG | 2 cut(s) | 440, 1116 |
| BseDI | CCNNGG | 5 cut(s) | 104, 341, 1052, 1083, 1114 |
| BseGI | GGATG | 9 cut(s) | 114, 195, 253, 302, 321, 519, 547, 834, 1092 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 60, 81, 168, 914, 1054, 1058 |
| BseMII | CTCAG | 2 cut(s) | 645, 1177 |
| BseNI | ACTGG | 4 cut(s) | 153, 399, 424, 553 |
| BseRI | GAGGAG | 2 cut(s) | 93, 581 |
| BseSI | GKGCMC | 1 cut(s) | 1031 |
| BseXI | GCAGC | 1 cut(s) | 170 |
| Bsh1236I | CGCG | 2 cut(s) | 68, 903 |
| Bsh1285I | CGRYCG | 1 cut(s) | 368 |
| BshFI | GGCC | 2 cut(s) | 13, 340 |
| BshNI | GGYRCC | 3 cut(s) | 918, 1028, 1109 |
| BsiEI | CGRYCG | 1 cut(s) | 368 |
| BsiHKAI | GWGCWC | 2 cut(s) | 134, 798 |
| BsiSI | CCGG | 3 cut(s) | 39, 162, 884 |
| BslFI | GGGAC | 1 cut(s) | 1052 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 60, 81, 168, 914, 1054, 1058 |
| BsmAI | GTCTC | 1 cut(s) | 730 |
| BsmBI | CGTCTC | 1 cut(s) | 730 |
| BsmFI | GGGAC | 1 cut(s) | 1052 |
| BsnI | GGCC | 2 cut(s) | 13, 340 |
| Bsp1286I | GDGCHC | 3 cut(s) | 134, 798, 1031 |
| Bsp13I | TCCGGA | 1 cut(s) | 883 |
| Bsp143I | GATC | 8 cut(s) | 63, 151, 220, 271, 360, 365, 678, 860 |
| Bsp19I | CCATGG | 2 cut(s) | 341, 1083 |
| BspACI | CCGC | 7 cut(s) | 68, 82, 252, 311, 595, 915, 1032 |
| BspANI | GGCC | 2 cut(s) | 13, 340 |
| BspCNI | CTCAG | 2 cut(s) | 644, 1176 |
| BspEI | TCCGGA | 1 cut(s) | 883 |
| BspFNI | CGCG | 2 cut(s) | 68, 903 |
| BspLI | GGNNCC | 7 cut(s) | 73, 362, 590, 920, 1018, 1030, 1111 |
| BspMI | ACCTGC | 1 cut(s) | 178 |
| BspPI | GGATC | 6 cut(s) | 71, 159, 279, 355, 368, 855 |
| BspT107I | GGYRCC | 3 cut(s) | 918, 1028, 1109 |
| BsrBI | CCGCTC | 1 cut(s) | 915 |
| BsrFI | RCCGGY | 1 cut(s) | 161 |
| BsrI | ACTGG | 4 cut(s) | 153, 399, 424, 553 |
| BssAI | RCCGGY | 1 cut(s) | 161 |
| BssECI | CCNNGG | 5 cut(s) | 104, 341, 1052, 1083, 1114 |
| BssMI | GATC | 8 cut(s) | 63, 151, 220, 271, 360, 365, 678, 860 |
| BssNI | GRCGYC | 2 cut(s) | 919, 1110 |
| BssT1I | CCWWGG | 3 cut(s) | 341, 1052, 1083 |
| Bst2UI | CCWGG | 2 cut(s) | 440, 1116 |
| Bst4CI | ACNGT | 1 cut(s) | 454 |
| BstACI | GRCGYC | 2 cut(s) | 919, 1110 |
| BstBAI | YACGTR | 1 cut(s) | 353 |
| BstC8I | GCNNGC | 5 cut(s) | 84, 163, 462, 917, 1060 |
| BstDEI | CTNAG | 5 cut(s) | 631, 744, 941, 1163, 1230 |
| BstDSI | CCRYGG | 2 cut(s) | 341, 1083 |
| BstF5I | GGATG | 9 cut(s) | 114, 195, 253, 302, 321, 519, 547, 834, 1092 |
| BstFNI | CGCG | 2 cut(s) | 68, 903 |
| BstH2I | RGCGCY | 2 cut(s) | 922, 1113 |
| BstHHI | GCGC | 4 cut(s) | 905, 921, 1064, 1112 |
| BstKTI | GATC | 8 cut(s) | 66, 154, 223, 274, 363, 368, 681, 863 |
| BstMAI | GTCTC | 1 cut(s) | 730 |
| BstMBI | GATC | 8 cut(s) | 63, 151, 220, 271, 360, 365, 678, 860 |
| BstMCI | CGRYCG | 1 cut(s) | 368 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 19, 35, 346, 476, 497, 925, 1198 |
| BstNI | CCWGG | 2 cut(s) | 440, 1116 |
| BstSCI | CCNGG | 2 cut(s) | 438, 1114 |
| BstSLI | GKGCMC | 1 cut(s) | 1031 |
| BstSNI | TACGTA | 1 cut(s) | 353 |
| BstUI | CGCG | 2 cut(s) | 68, 903 |
| BstV1I | GCAGC | 1 cut(s) | 170 |
| BstV2I | GAAGAC | 3 cut(s) | 40, 582, 710 |
| BstX2I | RGATCY | 3 cut(s) | 271, 360, 860 |
| BstYI | RGATCY | 3 cut(s) | 271, 360, 860 |
| BsuRI | GGCC | 2 cut(s) | 13, 340 |
| BtgI | CCRYGG | 2 cut(s) | 341, 1083 |
| BtgZI | GCGATG | 1 cut(s) | 704 |
| BtrI | CACGTC | 1 cut(s) | 445 |
| BtsCI | GGATG | 9 cut(s) | 114, 195, 253, 302, 321, 519, 547, 834, 1092 |
| BveI | ACCTGC | 1 cut(s) | 178 |
| Cac8I | GCNNGC | 5 cut(s) | 84, 163, 462, 917, 1060 |
| CfoI | GCGC | 4 cut(s) | 905, 921, 1064, 1112 |
| Cfr10I | RCCGGY | 1 cut(s) | 161 |
| Cfr13I | GGNCC | 1 cut(s) | 190 |
| Csp6I | GTAC | 2 cut(s) | 354, 556 |
| CviAII | CATG | 6 cut(s) | 78, 200, 342, 827, 1084, 1100 |
| CviQI | GTAC | 2 cut(s) | 354, 556 |
| DdeI | CTNAG | 5 cut(s) | 631, 744, 941, 1163, 1230 |
| DinI | GGCGCC | 2 cut(s) | 920, 1111 |
| DpnI | GATC | 8 cut(s) | 65, 153, 222, 273, 362, 367, 680, 862 |
| DpnII | GATC | 8 cut(s) | 63, 151, 220, 271, 360, 365, 678, 860 |
| DraIII | CACNNNGTG | 1 cut(s) | 129 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1165 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1165 |
| EaeI | YGGCCR | 1 cut(s) | 338 |
| Ecl136II | GAGCTC | 1 cut(s) | 796 |
| Eco105I | TACGTA | 1 cut(s) | 353 |
| Eco130I | CCWWGG | 3 cut(s) | 341, 1052, 1083 |
| Eco24I | GRGCYC | 1 cut(s) | 798 |
| Eco47I | GGWCC | 1 cut(s) | 190 |
| Eco53kI | GAGCTC | 1 cut(s) | 796 |
| EcoICRI | GAGCTC | 1 cut(s) | 796 |
| EcoRII | CCWGG | 2 cut(s) | 438, 1114 |
| EcoT14I | CCWWGG | 3 cut(s) | 341, 1052, 1083 |
| EcoT38I | GRGCYC | 1 cut(s) | 798 |
| EgeI | GGCGCC | 2 cut(s) | 920, 1111 |
| EheI | GGCGCC | 2 cut(s) | 920, 1111 |
| ErhI | CCWWGG | 3 cut(s) | 341, 1052, 1083 |
| Esp3I | CGTCTC | 1 cut(s) | 730 |
| FaeI | CATG | 6 cut(s) | 81, 203, 345, 830, 1087, 1103 |
| FaqI | GGGAC | 1 cut(s) | 1052 |
| FatI | CATG | 6 cut(s) | 77, 199, 341, 826, 1083, 1099 |
| FauI | CCCGC | 5 cut(s) | 61, 75, 245, 304, 908 |
| FauNDI | CATATG | 1 cut(s) | 537 |
| FblI | GTMKAC | 1 cut(s) | 120 |
| Fnu4HI | GCNGC | 1 cut(s) | 159 |
| FokI | GGATG | 9 cut(s) | 121, 182, 260, 309, 328, 506, 554, 821, 1079 |
| FriOI | GRGCYC | 1 cut(s) | 798 |
| Fsp4HI | GCNGC | 1 cut(s) | 159 |
| FspBI | CTAG | 2 cut(s) | 963, 1053 |
| GlaI | GCGC | 4 cut(s) | 904, 920, 1063, 1111 |
| GluI | GCNGC | 1 cut(s) | 159 |
| GsuI | CTGGAG | 1 cut(s) | 536 |
| HaeII | RGCGCY | 2 cut(s) | 922, 1113 |
| HaeIII | GGCC | 2 cut(s) | 13, 340 |
| HapII | CCGG | 3 cut(s) | 39, 162, 884 |
| HhaI | GCGC | 4 cut(s) | 905, 921, 1064, 1112 |
| Hin1I | GRCGYC | 2 cut(s) | 919, 1110 |
| Hin1II | CATG | 6 cut(s) | 81, 203, 345, 830, 1087, 1103 |
| Hin6I | GCGC | 4 cut(s) | 903, 919, 1062, 1110 |
| HinP1I | GCGC | 4 cut(s) | 903, 919, 1062, 1110 |
| HindIII | AAGCTT | 1 cut(s) | 468 |
| HinfI | GANTC | 5 cut(s) | 529, 545, 756, 777, 887 |
| HpaII | CCGG | 3 cut(s) | 39, 162, 884 |
| HphI | GGTGA | 3 cut(s) | 520, 1115, 1130 |
| Hpy166II | GTNNAC | 3 cut(s) | 121, 193, 1042 |
| Hpy188I | TCNGA | 7 cut(s) | 108, 180, 220, 365, 427, 634, 1158 |
| Hpy188III | TCNNGA | 3 cut(s) | 620, 858, 884 |
| Hpy8I | GTNNAC | 3 cut(s) | 121, 193, 1042 |
| HpyAV | CCTTC | 4 cut(s) | 65, 262, 579, 1045 |
| HpyCH4III | ACNGT | 1 cut(s) | 454 |
| HpyCH4IV | ACGT | 4 cut(s) | 352, 444, 958, 1151 |
| HpyCH4V | TGCA | 5 cut(s) | 187, 203, 731, 770, 1127 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 19, 35, 346, 476, 497, 925, 1198 |
| HpyF3I | CTNAG | 5 cut(s) | 631, 744, 941, 1163, 1230 |
| HpySE526I | ACGT | 4 cut(s) | 352, 444, 958, 1151 |
| Hsp92I | GRCGYC | 2 cut(s) | 919, 1110 |
| Hsp92II | CATG | 6 cut(s) | 81, 203, 345, 830, 1087, 1103 |
| HspAI | GCGC | 4 cut(s) | 903, 919, 1062, 1110 |
| KasI | GGCGCC | 2 cut(s) | 918, 1109 |
| Kpn2I | TCCGGA | 1 cut(s) | 883 |
| KroI | GCCGGC | 1 cut(s) | 161 |
| KroNI | GCCGGC | 1 cut(s) | 163 |
| Kzo9I | GATC | 8 cut(s) | 63, 151, 220, 271, 360, 365, 678, 860 |
| LmnI | GCTCC | 5 cut(s) | 137, 375, 409, 594, 803 |
| Lsp1109I | GCAGC | 1 cut(s) | 170 |
| LweI | GCATC | 2 cut(s) | 1101, 1114 |
| MaeI | CTAG | 2 cut(s) | 963, 1053 |
| MaeII | ACGT | 4 cut(s) | 352, 444, 958, 1151 |
| MaeIII | GTNAC | 3 cut(s) | 136, 380, 763 |
| MalI | GATC | 8 cut(s) | 65, 153, 222, 273, 362, 367, 680, 862 |
| MbiI | CCGCTC | 1 cut(s) | 915 |
| MboI | GATC | 8 cut(s) | 63, 151, 220, 271, 360, 365, 678, 860 |
| MboII | GAAGA | 6 cut(s) | 40, 266, 584, 587, 715, 856 |
| MflI | RGATCY | 3 cut(s) | 271, 360, 860 |
| MhlI | GDGCHC | 3 cut(s) | 134, 798, 1031 |
| MlsI | TGGCCA | 1 cut(s) | 340 |
| MluCI | AATT | 4 cut(s) | 301, 662, 853, 892 |
| MluNI | TGGCCA | 1 cut(s) | 340 |
| Mly113I | GGCGCC | 2 cut(s) | 919, 1110 |
| MlyI | GAGTC | 1 cut(s) | 523 |
| MmeI | TCCRAC | 1 cut(s) | 265 |
| MnlI | CCTC | 9 cut(s) | 24, 24, 85, 114, 226, 254, 602, 982, 1212 |
| Mox20I | TGGCCA | 1 cut(s) | 340 |
| MroI | TCCGGA | 1 cut(s) | 883 |
| MroNI | GCCGGC | 1 cut(s) | 161 |
| MroXI | GAANNNNTTC | 2 cut(s) | 639, 707 |
| MscI | TGGCCA | 1 cut(s) | 340 |
| MseI | TTAA | 3 cut(s) | 494, 648, 656 |
| MslI | CAYNNNNRTG | 6 cut(s) | 198, 524, 540, 839, 1101, 1104 |
| Msp20I | TGGCCA | 1 cut(s) | 340 |
| MspI | CCGG | 3 cut(s) | 39, 162, 884 |
| MspR9I | CCNGG | 2 cut(s) | 440, 1116 |
| MvaI | CCWGG | 2 cut(s) | 440, 1116 |
| MvnI | CGCG | 2 cut(s) | 68, 903 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 19, 35, 346, 476, 497, 925, 1198 |
| NaeI | GCCGGC | 1 cut(s) | 163 |
| NarI | GGCGCC | 2 cut(s) | 919, 1110 |
| NcoI | CCATGG | 2 cut(s) | 341, 1083 |
| NdeI | CATATG | 1 cut(s) | 537 |
| NdeII | GATC | 8 cut(s) | 63, 151, 220, 271, 360, 365, 678, 860 |
| NgoMIV | GCCGGC | 1 cut(s) | 161 |
| NlaIII | CATG | 6 cut(s) | 81, 203, 345, 830, 1087, 1103 |
| NlaIV | GGNNCC | 7 cut(s) | 73, 362, 590, 920, 1018, 1030, 1111 |
| NmuCI | GTSAC | 1 cut(s) | 136 |
| PdiI | GCCGGC | 1 cut(s) | 163 |
| PdmI | GAANNNNTTC | 2 cut(s) | 639, 707 |
| PfeI | GAWTC | 4 cut(s) | 545, 756, 777, 887 |
| PkrI | GCNGC | 1 cut(s) | 160 |
| Ple19I | CGATCG | 1 cut(s) | 368 |
| PleI | GAGTC | 1 cut(s) | 523 |
| PluTI | GGCGCC | 2 cut(s) | 922, 1113 |
| PpsI | GAGTC | 1 cut(s) | 523 |
| Ppu21I | YACGTR | 1 cut(s) | 353 |
| Psp124BI | GAGCTC | 1 cut(s) | 798 |
| Psp1406I | AACGTT | 1 cut(s) | 1151 |
| Psp6I | CCWGG | 2 cut(s) | 438, 1114 |
| PspGI | CCWGG | 2 cut(s) | 438, 1114 |
| PspN4I | GGNNCC | 7 cut(s) | 73, 362, 590, 920, 1018, 1030, 1111 |
| PspPI | GGNCC | 1 cut(s) | 190 |
| PsuI | RGATCY | 3 cut(s) | 271, 360, 860 |
| PvuI | CGATCG | 1 cut(s) | 368 |
| RsaI | GTAC | 2 cut(s) | 355, 557 |
| RsaNI | GTAC | 2 cut(s) | 354, 556 |
| RseI | CAYNNNNRTG | 6 cut(s) | 198, 524, 540, 839, 1101, 1104 |
| SacI | GAGCTC | 1 cut(s) | 798 |
| SaqAI | TTAA | 3 cut(s) | 494, 648, 656 |
| SatI | GCNGC | 1 cut(s) | 159 |
| Sau3AI | GATC | 8 cut(s) | 63, 151, 220, 271, 360, 365, 678, 860 |
| Sau96I | GGNCC | 1 cut(s) | 190 |
| SchI | GAGTC | 1 cut(s) | 523 |
| ScrFI | CCNGG | 2 cut(s) | 440, 1116 |
| SduI | GDGCHC | 3 cut(s) | 134, 798, 1031 |
| SfaNI | GCATC | 2 cut(s) | 1101, 1114 |
| SfoI | GGCGCC | 2 cut(s) | 920, 1111 |
| SinI | GGWCC | 1 cut(s) | 190 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 198, 524, 540, 839, 1101, 1104 |
| SmlI | CTYRAG | 1 cut(s) | 465 |
| SmoI | CTYRAG | 1 cut(s) | 465 |
| SnaBI | TACGTA | 1 cut(s) | 353 |
| Sse9I | AATT | 4 cut(s) | 301, 662, 853, 892 |
| SsiI | CCGC | 7 cut(s) | 68, 82, 252, 311, 595, 915, 1032 |
| SspDI | GGCGCC | 2 cut(s) | 918, 1109 |
| SspI | AATATT | 1 cut(s) | 814 |
| SspMI | CTAG | 2 cut(s) | 963, 1053 |
| SstI | GAGCTC | 1 cut(s) | 798 |
| StyD4I | CCNGG | 2 cut(s) | 438, 1114 |
| StyI | CCWWGG | 3 cut(s) | 341, 1052, 1083 |
| TaaI | ACNGT | 1 cut(s) | 454 |
| TaiI | ACGT | 4 cut(s) | 355, 447, 961, 1154 |
| TaqI | TCGA | 4 cut(s) | 95, 154, 754, 857 |
| TasI | AATT | 4 cut(s) | 301, 662, 853, 892 |
| TfiI | GAWTC | 4 cut(s) | 545, 756, 777, 887 |
| Tru1I | TTAA | 3 cut(s) | 494, 648, 656 |
| Tru9I | TTAA | 3 cut(s) | 494, 648, 656 |
| TseFI | GTSAC | 1 cut(s) | 136 |
| TseI | GCWGC | 1 cut(s) | 158 |
| Tsp45I | GTSAC | 1 cut(s) | 136 |
| TspDTI | ATGAA | 4 cut(s) | 581, 585, 824, 957 |
| TspGWI | ACGGA | 3 cut(s) | 124, 853, 1029 |
| VpaK11BI | GGWCC | 1 cut(s) | 190 |
| XapI | RAATTY | 1 cut(s) | 662 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1055, 1103 |
| XmaJI | CCTAGG | 1 cut(s) | 1052 |
| XmiI | GTMKAC | 1 cut(s) | 120 |
| XmnI | GAANNNNTTC | 2 cut(s) | 639, 707 |
| XspI | CTAG | 2 cut(s) | 963, 1053 |