zinc finger
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 678, 693 |
| AatII | GACGTC | 1 cut(s) | 973 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 360, 724 |
| AciI | CCGC | 3 cut(s) | 224, 351, 524 |
| AclWI | GGATC | 2 cut(s) | 23, 920 |
| AcoI | YGGCCR | 2 cut(s) | 93, 823 |
| AcsI | RAATTY | 4 cut(s) | 23, 39, 81, 747 |
| AcuI | CTGAAG | 1 cut(s) | 302 |
| AcyI | GRCGYC | 1 cut(s) | 970 |
| AfaI | GTAC | 1 cut(s) | 206 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 360, 724 |
| AgsI | TTSAA | 4 cut(s) | 38, 328, 346, 487 |
| AhlI | ACTAGT | 1 cut(s) | 653 |
| AjiI | CACGTC | 1 cut(s) | 674 |
| AluBI | AGCT | 6 cut(s) | 63, 232, 415, 541, 798, 899 |
| AluI | AGCT | 6 cut(s) | 63, 232, 415, 541, 798, 899 |
| Alw21I | GWGCWC | 3 cut(s) | 292, 543, 661 |
| Alw26I | GTCTC | 2 cut(s) | 567, 582 |
| AlwI | GGATC | 2 cut(s) | 23, 920 |
| AoxI | GGCC | 3 cut(s) | 93, 700, 823 |
| ApoI | RAATTY | 4 cut(s) | 23, 39, 81, 747 |
| AspLEI | GCGC | 2 cut(s) | 315, 868 |
| AspS9I | GGNCC | 1 cut(s) | 728 |
| AsuC2I | CCSGG | 1 cut(s) | 574 |
| AsuHPI | GGTGA | 3 cut(s) | 77, 226, 607 |
| AvaII | GGWCC | 1 cut(s) | 728 |
| AxyI | CCTNAGG | 1 cut(s) | 591 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 452, 485 |
| BalI | TGGCCA | 2 cut(s) | 95, 825 |
| BanII | GRGCYC | 1 cut(s) | 543 |
| BauI | CACGAG | 1 cut(s) | 660 |
| Bbv12I | GWGCWC | 3 cut(s) | 292, 543, 661 |
| BccI | CCATC | 1 cut(s) | 564 |
| BceAI | ACGGC | 1 cut(s) | 687 |
| BciVI | GTATCC | 1 cut(s) | 946 |
| BcnI | CCSGG | 1 cut(s) | 574 |
| BcoDI | GTCTC | 2 cut(s) | 567, 582 |
| BcuI | ACTAGT | 1 cut(s) | 653 |
| BfaI | CTAG | 2 cut(s) | 285, 654 |
| BfoI | RGCGCY | 1 cut(s) | 869 |
| BfuI | GTATCC | 1 cut(s) | 946 |
| Bme1390I | CCNGG | 1 cut(s) | 574 |
| Bme18I | GGWCC | 1 cut(s) | 728 |
| BmgBI | CACGTC | 1 cut(s) | 674 |
| BmgT120I | GGNCC | 1 cut(s) | 728 |
| BmiI | GGNNCC | 1 cut(s) | 729 |
| BmrFI | CCNGG | 1 cut(s) | 574 |
| BmsI | GCATC | 2 cut(s) | 16, 64 |
| BpuEI | CTTGAG | 1 cut(s) | 248 |
| BpuMI | CCSGG | 1 cut(s) | 574 |
| Bsa29I | ATCGAT | 2 cut(s) | 253, 915 |
| BsaHI | GRCGYC | 1 cut(s) | 970 |
| BsaI | GGTCTC | 1 cut(s) | 582 |
| BsaJI | CCNNGG | 4 cut(s) | 103, 153, 703, 929 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 381, 411 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 360, 724 |
| Bse1I | ACTGG | 1 cut(s) | 616 |
| Bse21I | CCTNAGG | 1 cut(s) | 591 |
| Bse3DI | GCAATG | 1 cut(s) | 826 |
| BseCI | ATCGAT | 2 cut(s) | 253, 915 |
| BseDI | CCNNGG | 4 cut(s) | 103, 153, 703, 929 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 360, 724 |
| BseMI | GCAATG | 1 cut(s) | 826 |
| BseMII | CTCAG | 2 cut(s) | 582, 933 |
| BseNI | ACTGG | 1 cut(s) | 616 |
| BseYI | CCCAGC | 1 cut(s) | 63 |
| BshFI | GGCC | 3 cut(s) | 95, 702, 825 |
| BshVI | ATCGAT | 2 cut(s) | 253, 915 |
| BsiHKAI | GWGCWC | 3 cut(s) | 292, 543, 661 |
| BsiSI | CCGG | 1 cut(s) | 573 |
| BslFI | GGGAC | 2 cut(s) | 684, 764 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 360, 724 |
| BsmAI | GTCTC | 2 cut(s) | 567, 582 |
| BsmFI | GGGAC | 2 cut(s) | 684, 764 |
| BsmI | GAATGC | 1 cut(s) | 604 |
| BsnI | GGCC | 3 cut(s) | 95, 702, 825 |
| Bso31I | GGTCTC | 1 cut(s) | 582 |
| Bsp1286I | GDGCHC | 3 cut(s) | 292, 543, 661 |
| Bsp143I | GATC | 7 cut(s) | 28, 145, 250, 676, 853, 916, 925 |
| BspACI | CCGC | 3 cut(s) | 224, 351, 524 |
| BspANI | GGCC | 3 cut(s) | 95, 702, 825 |
| BspCNI | CTCAG | 2 cut(s) | 583, 934 |
| BspDI | ATCGAT | 2 cut(s) | 253, 915 |
| BspLI | GGNNCC | 1 cut(s) | 729 |
| BspPI | GGATC | 2 cut(s) | 23, 920 |
| BspTNI | GGTCTC | 1 cut(s) | 582 |
| BsrDI | GCAATG | 1 cut(s) | 826 |
| BsrI | ACTGG | 1 cut(s) | 616 |
| BssECI | CCNNGG | 4 cut(s) | 103, 153, 703, 929 |
| BssMI | GATC | 7 cut(s) | 28, 145, 250, 676, 853, 916, 925 |
| BssNI | GRCGYC | 1 cut(s) | 970 |
| BssSI | CACGAG | 1 cut(s) | 660 |
| BssT1I | CCWWGG | 3 cut(s) | 103, 153, 929 |
| Bst2BI | CACGAG | 1 cut(s) | 660 |
| Bst4CI | ACNGT | 3 cut(s) | 214, 294, 468 |
| BstACI | GRCGYC | 1 cut(s) | 970 |
| BstC8I | GCNNGC | 2 cut(s) | 413, 848 |
| BstDEI | CTNAG | 2 cut(s) | 591, 942 |
| BstDSI | CCRYGG | 1 cut(s) | 703 |
| BstH2I | RGCGCY | 1 cut(s) | 869 |
| BstHHI | GCGC | 2 cut(s) | 315, 868 |
| BstKTI | GATC | 7 cut(s) | 31, 148, 253, 679, 856, 919, 928 |
| BstMAI | GTCTC | 2 cut(s) | 567, 582 |
| BstMBI | GATC | 7 cut(s) | 28, 145, 250, 676, 853, 916, 925 |
| BstNSI | RCATGY | 1 cut(s) | 850 |
| BstSCI | CCNGG | 1 cut(s) | 572 |
| BstX2I | RGATCY | 1 cut(s) | 925 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 451 |
| BstYI | RGATCY | 1 cut(s) | 925 |
| Bsu15I | ATCGAT | 2 cut(s) | 253, 915 |
| Bsu36I | CCTNAGG | 1 cut(s) | 591 |
| BsuI | GTATCC | 1 cut(s) | 946 |
| BsuRI | GGCC | 3 cut(s) | 95, 702, 825 |
| BsuTUI | ATCGAT | 2 cut(s) | 253, 915 |
| BtgI | CCRYGG | 1 cut(s) | 703 |
| BtrI | CACGTC | 1 cut(s) | 674 |
| BtsIMutI | CAGTG | 3 cut(s) | 336, 406, 609 |
| Cac8I | GCNNGC | 2 cut(s) | 413, 848 |
| CfoI | GCGC | 2 cut(s) | 315, 868 |
| Cfr13I | GGNCC | 1 cut(s) | 728 |
| ClaI | ATCGAT | 2 cut(s) | 253, 915 |
| CseI | GACGC | 2 cut(s) | 13, 161 |
| Csp6I | GTAC | 1 cut(s) | 205 |
| CviAII | CATG | 8 cut(s) | 355, 440, 451, 510, 620, 632, 644, 847 |
| CviQI | GTAC | 1 cut(s) | 205 |
| DdeI | CTNAG | 2 cut(s) | 591, 942 |
| DpnI | GATC | 7 cut(s) | 30, 147, 252, 678, 855, 918, 927 |
| DpnII | GATC | 7 cut(s) | 28, 145, 250, 676, 853, 916, 925 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 678, 693 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 678, 693 |
| EaeI | YGGCCR | 2 cut(s) | 93, 823 |
| EciI | GGCGGA | 2 cut(s) | 340, 539 |
| Ecl136II | GAGCTC | 1 cut(s) | 541 |
| Eco130I | CCWWGG | 3 cut(s) | 103, 153, 929 |
| Eco24I | GRGCYC | 1 cut(s) | 543 |
| Eco31I | GGTCTC | 1 cut(s) | 582 |
| Eco47I | GGWCC | 1 cut(s) | 728 |
| Eco53kI | GAGCTC | 1 cut(s) | 541 |
| Eco57I | CTGAAG | 1 cut(s) | 302 |
| Eco81I | CCTNAGG | 1 cut(s) | 591 |
| EcoICRI | GAGCTC | 1 cut(s) | 541 |
| EcoT14I | CCWWGG | 3 cut(s) | 103, 153, 929 |
| EcoT22I | ATGCAT | 1 cut(s) | 360 |
| EcoT38I | GRGCYC | 1 cut(s) | 543 |
| ErhI | CCWWGG | 3 cut(s) | 103, 153, 929 |
| FaeI | CATG | 8 cut(s) | 358, 443, 454, 513, 623, 635, 647, 850 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 210, 242 |
| FaqI | GGGAC | 2 cut(s) | 684, 764 |
| FatI | CATG | 8 cut(s) | 354, 439, 450, 509, 619, 631, 643, 846 |
| FauI | CCCGC | 1 cut(s) | 231 |
| FriOI | GRGCYC | 1 cut(s) | 543 |
| FspBI | CTAG | 2 cut(s) | 285, 654 |
| GlaI | GCGC | 2 cut(s) | 314, 867 |
| GsaI | CCCAGC | 1 cut(s) | 67 |
| HaeII | RGCGCY | 1 cut(s) | 869 |
| HaeIII | GGCC | 3 cut(s) | 95, 702, 825 |
| HapII | CCGG | 1 cut(s) | 573 |
| HgaI | GACGC | 2 cut(s) | 13, 161 |
| HhaI | GCGC | 2 cut(s) | 315, 868 |
| Hin1I | GRCGYC | 1 cut(s) | 970 |
| Hin1II | CATG | 8 cut(s) | 358, 443, 454, 513, 623, 635, 647, 850 |
| Hin6I | GCGC | 2 cut(s) | 313, 866 |
| HinP1I | GCGC | 2 cut(s) | 313, 866 |
| HindIII | AAGCTT | 1 cut(s) | 796 |
| HinfI | GANTC | 2 cut(s) | 483, 935 |
| HpaII | CCGG | 1 cut(s) | 573 |
| HphI | GGTGA | 3 cut(s) | 77, 226, 607 |
| Hpy188I | TCNGA | 4 cut(s) | 12, 768, 925, 943 |
| Hpy188III | TCNNGA | 4 cut(s) | 35, 71, 320, 473 |
| Hpy99I | CGWCG | 1 cut(s) | 972 |
| HpyAV | CCTTC | 1 cut(s) | 326 |
| HpyCH4III | ACNGT | 3 cut(s) | 214, 294, 468 |
| HpyCH4IV | ACGT | 2 cut(s) | 673, 970 |
| HpyCH4V | TGCA | 5 cut(s) | 142, 358, 497, 804, 819 |
| HpyF3I | CTNAG | 2 cut(s) | 591, 942 |
| HpySE526I | ACGT | 2 cut(s) | 673, 970 |
| Hsp92I | GRCGYC | 1 cut(s) | 970 |
| Hsp92II | CATG | 8 cut(s) | 358, 443, 454, 513, 623, 635, 647, 850 |
| HspAI | GCGC | 2 cut(s) | 313, 866 |
| Kzo9I | GATC | 7 cut(s) | 28, 145, 250, 676, 853, 916, 925 |
| LmnI | GCTCC | 2 cut(s) | 526, 546 |
| LpnPI | CCDG | 8 cut(s) | 49, 305, 408, 586, 597, 603, 820, 864 |
| LweI | GCATC | 2 cut(s) | 16, 64 |
| MaeI | CTAG | 2 cut(s) | 285, 654 |
| MaeII | ACGT | 2 cut(s) | 673, 970 |
| MaeIII | GTNAC | 1 cut(s) | 334 |
| MalI | GATC | 7 cut(s) | 30, 147, 252, 678, 855, 918, 927 |
| MboI | GATC | 7 cut(s) | 28, 145, 250, 676, 853, 916, 925 |
| MboII | GAAGA | 1 cut(s) | 416 |
| MflI | RGATCY | 1 cut(s) | 925 |
| MhlI | GDGCHC | 3 cut(s) | 292, 543, 661 |
| MlsI | TGGCCA | 2 cut(s) | 95, 825 |
| MluCI | AATT | 8 cut(s) | 17, 23, 39, 81, 346, 380, 747, 903 |
| MluNI | TGGCCA | 2 cut(s) | 95, 825 |
| MnlI | CCTC | 7 cut(s) | 42, 379, 473, 512, 586, 889, 937 |
| Mox20I | TGGCCA | 2 cut(s) | 95, 825 |
| Mph1103I | ATGCAT | 1 cut(s) | 360 |
| MscI | TGGCCA | 2 cut(s) | 95, 825 |
| MseI | TTAA | 5 cut(s) | 117, 183, 666, 714, 906 |
| MslI | CAYNNNNRTG | 1 cut(s) | 449 |
| Msp20I | TGGCCA | 2 cut(s) | 95, 825 |
| MspI | CCGG | 1 cut(s) | 573 |
| MspR9I | CCNGG | 1 cut(s) | 574 |
| Mva1269I | GAATGC | 1 cut(s) | 604 |
| NciI | CCSGG | 1 cut(s) | 574 |
| NdeII | GATC | 7 cut(s) | 28, 145, 250, 676, 853, 916, 925 |
| NlaIII | CATG | 8 cut(s) | 358, 443, 454, 513, 623, 635, 647, 850 |
| NlaIV | GGNNCC | 1 cut(s) | 729 |
| NmuCI | GTSAC | 1 cut(s) | 334 |
| NsiI | ATGCAT | 1 cut(s) | 360 |
| NspI | RCATGY | 1 cut(s) | 850 |
| PaeI | GCATGC | 1 cut(s) | 850 |
| PctI | GAATGC | 1 cut(s) | 604 |
| PfeI | GAWTC | 2 cut(s) | 483, 935 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 360, 724 |
| Psp124BI | GAGCTC | 1 cut(s) | 543 |
| PspFI | CCCAGC | 1 cut(s) | 63 |
| PspN4I | GGNNCC | 1 cut(s) | 729 |
| PspPI | GGNCC | 1 cut(s) | 728 |
| PsuI | RGATCY | 1 cut(s) | 925 |
| RsaI | GTAC | 1 cut(s) | 206 |
| RsaNI | GTAC | 1 cut(s) | 205 |
| RseI | CAYNNNNRTG | 1 cut(s) | 449 |
| SacI | GAGCTC | 1 cut(s) | 543 |
| SaqAI | TTAA | 5 cut(s) | 117, 183, 666, 714, 906 |
| Sau3AI | GATC | 7 cut(s) | 28, 145, 250, 676, 853, 916, 925 |
| Sau96I | GGNCC | 1 cut(s) | 728 |
| ScrFI | CCNGG | 1 cut(s) | 574 |
| SduI | GDGCHC | 3 cut(s) | 292, 543, 661 |
| SfaNI | GCATC | 2 cut(s) | 16, 64 |
| SinI | GGWCC | 1 cut(s) | 728 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 449 |
| SmlI | CTYRAG | 1 cut(s) | 227 |
| SmoI | CTYRAG | 1 cut(s) | 227 |
| SpeI | ACTAGT | 1 cut(s) | 653 |
| SphI | GCATGC | 1 cut(s) | 850 |
| Sse9I | AATT | 8 cut(s) | 17, 23, 39, 81, 346, 380, 747, 903 |
| SsiI | CCGC | 3 cut(s) | 224, 351, 524 |
| SspMI | CTAG | 2 cut(s) | 285, 654 |
| SstI | GAGCTC | 1 cut(s) | 543 |
| StyD4I | CCNGG | 1 cut(s) | 572 |
| StyI | CCWWGG | 3 cut(s) | 103, 153, 929 |
| TaaI | ACNGT | 3 cut(s) | 214, 294, 468 |
| TaiI | ACGT | 2 cut(s) | 676, 973 |
| TaqI | TCGA | 7 cut(s) | 148, 253, 417, 431, 472, 915, 967 |
| TasI | AATT | 8 cut(s) | 17, 23, 39, 81, 346, 380, 747, 903 |
| TfiI | GAWTC | 2 cut(s) | 483, 935 |
| Tru1I | TTAA | 5 cut(s) | 117, 183, 666, 714, 906 |
| Tru9I | TTAA | 5 cut(s) | 117, 183, 666, 714, 906 |
| TscAI | CASTG | 3 cut(s) | 343, 406, 616 |
| TseFI | GTSAC | 1 cut(s) | 334 |
| Tsp45I | GTSAC | 1 cut(s) | 334 |
| TspDTI | ATGAA | 6 cut(s) | 312, 428, 563, 785, 807, 927 |
| TspRI | CASTG | 3 cut(s) | 343, 406, 616 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 360, 724 |
| VpaK11BI | GGWCC | 1 cut(s) | 728 |
| XapI | RAATTY | 4 cut(s) | 23, 39, 81, 747 |
| XceI | RCATGY | 1 cut(s) | 850 |
| XspI | CTAG | 2 cut(s) | 285, 654 |
| ZraI | GACGTC | 1 cut(s) | 971 |
| Zsp2I | ATGCAT | 1 cut(s) | 360 |